Rh6AG504600
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Forward (+)
67698537 .. 67701210
2674 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG504600.1

Sequence Viewer

Length: 1224 bp
ATGAACAAATTTCAAGGGATATTTCAGAAGAAAAAGGGGTCTCCAACGGCGTTGCCGAGAATTGATCCTAGCGCAGCGAAGCAAGTAACGCCTACTCATTACACGCCGGCCACTGTGGCAGCTGTGGAGCCGCACGGTTGTTGTCGAGATTCGGTCAACGTTTTTTCGATGAGCCAGTCTACCAAGAAGTTGGAACAGCAGGTGGCAGAACTGGAAAAGAAATTAGCAAAGGAGAAAGAGCTTCGGATGATGTACATAAAGAAATTGGAAAGAACACAAGATTATTTGAGGTATTGTCTACAAGTAGCCCAAGAAAATGGGTTTTTGGACCTTGTACTCCATAACAAAGATCATGCCGACACTGTTAACAATGCCACTGGTAATACCAGTCCTCAATTGCCAACTACTCCTCTGCACCAGCACCACCCACCTTCTGATCTAGATGCTCTCATCGATCAAGCCAAGCTAAATGGATGGTTCATAAATACAGATGAGATTGAATTTGAAGAGAAGATAGGGCAGGGGAGCACAGCACAGATATACAAAGCAACATGGCATGGACTTGATGTCGCGGTGAAATGCATAGAACCTGAATTCTTTGAATCAAACGAGAATGGTGTCTCATTTTTCGCTCAAGAGCTCGATACGTTATGTAGGCAGCGTCATCGGTACGTGCTTCATCTAATGGGGGCGTGCCTTGATCCTCCTAACTATGCTTGGGTGGTGACCGAGTTCTTGAGCTCGACATTGAAAGAGTGGCTGCACGGCCCTGGAAATAGGCAAAAAGAGAGGATGATTGAGCTTCCTCCATTGGAAGAGAGGGTGGCCAGGGCATTGGAGATCGCTCAGGCCATGCAGTATCTCCACGAACAAAAGCCTAAGGTTCTTCATCGCGACCTAAAGCCTAGCAACATCTTTTTGGATGACGCTGGTCACGTAAGAGTTGCAGATTTTGGTCACGCTCGGTTCTTGAGTGATGAGGAGATGGCACTAACAGGGGAAACAGGAACATATGTGTACATGGCGCCAGAGGTGATCCAATGCGAGCCTTACAATGAGAAATGTGATGTATACAGCTTCGGGATTATACTCAATGAGATTATAACTGGAAATTATCCATATATTGAGACAGATTATGGTCCTACTATGGTACGTATTAGTACGTTAAACACCTCTTCCTCAAGTCAAGCAAATATGAATGTTAAACAAAAGCCTCACCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

407

Amino Acids

46.21

Weight (kDa)

5.83

Isoelectric Point (pI)

39.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 166 - 378 6.8e-38 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 167 - 377 3.1e-43 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0014670)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1103
AarI CACCTGC 1 cut(s) 190
Acc36I ACCTGC 1 cut(s) 190
AccB1I GGYRCC 1 cut(s) 1024
AccI GTMKAC 3 cut(s) 179, 298, 1071
AccII CGCG 2 cut(s) 572, 894
AciI CCGC 2 cut(s) 131, 572
AclI AACGTT 1 cut(s) 159
AclWI GGATC 3 cut(s) 59, 695, 1030
AcoI YGGCCR 2 cut(s) 108, 825
AcsI RAATTY 3 cut(s) 8, 500, 593
AcyI GRCGYC 1 cut(s) 1025
AfaI GTAC 6 cut(s) 254, 336, 671, 1019, 1152, 1162
AgsI TTSAA 5 cut(s) 14, 500, 506, 602, 751
AhdI GACNNNNNGTC 1 cut(s) 566
AjnI CCWGG 2 cut(s) 769, 827
AluBI AGCT 7 cut(s) 122, 241, 466, 640, 741, 802, 1077
AluI AGCT 7 cut(s) 122, 241, 466, 640, 741, 802, 1077
Alw21I GWGCWC 3 cut(s) 530, 642, 743
Alw26I GTCTC 3 cut(s) 45, 625, 1121
AlwI GGATC 3 cut(s) 59, 695, 1030
AoxI GGCC 4 cut(s) 108, 766, 825, 849
ApeKI GCWGC 4 cut(s) 74, 119, 658, 760
ApoI RAATTY 3 cut(s) 8, 500, 593
AspLEI GCGC 2 cut(s) 74, 1027
AspS9I GGNCC 3 cut(s) 328, 767, 1139
AsuHPI GGTGA 4 cut(s) 586, 736, 1045, 1208
AvaII GGWCC 2 cut(s) 328, 1139
AxyI CCTNAGG 1 cut(s) 879
BalI TGGCCA 1 cut(s) 827
BanI GGYRCC 1 cut(s) 1024
BanII GRGCYC 2 cut(s) 642, 743
Bbv12I GWGCWC 3 cut(s) 530, 642, 743
BbvI GCAGC 4 cut(s) 86, 131, 670, 747
BccI CCATC 2 cut(s) 468, 979
BceAI ACGGC 2 cut(s) 63, 781
BcgI CGANNNNNNTGC 2 cut(s) 647, 681
BciT130I CCWGG 2 cut(s) 771, 829
BcoDI GTCTC 3 cut(s) 45, 625, 1121
BfaI CTAG 3 cut(s) 69, 440, 906
BfoI RGCGCY 1 cut(s) 1028
BfuAI ACCTGC 1 cut(s) 190
BglI GCCNNNNNGGC 1 cut(s) 116
BisI GCNGC 5 cut(s) 75, 120, 131, 659, 761
BlsI GCNGC 5 cut(s) 76, 121, 132, 660, 762
Bme1390I CCNGG 2 cut(s) 771, 829
Bme18I GGWCC 2 cut(s) 328, 1139
BmeRI GACNNNNNGTC 1 cut(s) 566
BmgT120I GGNCC 3 cut(s) 328, 767, 1139
BmiI GGNNCC 2 cut(s) 129, 1026
BmrFI CCNGG 2 cut(s) 771, 829
BmsI GCATC 1 cut(s) 433
BoxI GACNNNNGTC 1 cut(s) 930
Bpu10I CCTNAGC 1 cut(s) 846
BpuEI CTTGAG 4 cut(s) 618, 757, 991, 1165
Bsa29I ATCGAT 1 cut(s) 453
BsaAI YACGTR 3 cut(s) 673, 937, 1154
BsaHI GRCGYC 1 cut(s) 1025
BsaI GGTCTC 1 cut(s) 45
BsaJI CCNNGG 2 cut(s) 769, 828
Bse118I RCCGGY 1 cut(s) 106
Bse1I ACTGG 5 cut(s) 175, 216, 382, 387, 1111
Bse21I CCTNAGG 1 cut(s) 879
BseBI CCWGG 2 cut(s) 771, 829
BseCI ATCGAT 1 cut(s) 453
BseDI CCNNGG 2 cut(s) 769, 828
BseGI GGATG 4 cut(s) 252, 479, 798, 928
BseMII CTCAG 1 cut(s) 860
BseNI ACTGG 5 cut(s) 175, 216, 382, 387, 1111
BseRI GAGGAG 2 cut(s) 399, 995
BseXI GCAGC 4 cut(s) 86, 131, 670, 747
BsgI GTGCAG 2 cut(s) 398, 746
Bsh1236I CGCG 2 cut(s) 572, 894
BshFI GGCC 4 cut(s) 110, 768, 827, 851
BshNI GGYRCC 1 cut(s) 1024
BshVI ATCGAT 1 cut(s) 453
BsiHKAI GWGCWC 3 cut(s) 530, 642, 743
BsiSI CCGG 1 cut(s) 107
BsmAI GTCTC 3 cut(s) 45, 625, 1121
BsnI GGCC 4 cut(s) 110, 768, 827, 851
Bso31I GGTCTC 1 cut(s) 45
Bsp1286I GDGCHC 3 cut(s) 530, 642, 743
Bsp1407I TGTACA 2 cut(s) 252, 1017
Bsp143I GATC 7 cut(s) 64, 349, 436, 454, 700, 840, 1035
Bsp68I TCGCGA 1 cut(s) 894
BspACI CCGC 2 cut(s) 131, 572
BspANI GGCC 4 cut(s) 110, 768, 827, 851
BspCNI CTCAG 1 cut(s) 859
BspDI ATCGAT 1 cut(s) 453
BspFNI CGCG 2 cut(s) 572, 894
BspLI GGNNCC 2 cut(s) 129, 1026
BspMI ACCTGC 1 cut(s) 190
BspPI GGATC 3 cut(s) 59, 695, 1030
BspT107I GGYRCC 1 cut(s) 1024
BspTNI GGTCTC 1 cut(s) 45
BsrFI RCCGGY 1 cut(s) 106
BsrGI TGTACA 2 cut(s) 252, 1017
BsrI ACTGG 5 cut(s) 175, 216, 382, 387, 1111
BssAI RCCGGY 1 cut(s) 106
BssECI CCNNGG 2 cut(s) 769, 828
BssMI GATC 7 cut(s) 64, 349, 436, 454, 700, 840, 1035
BssNAI GTATAC 1 cut(s) 1072
BssNI GRCGYC 1 cut(s) 1025
Bst1107I GTATAC 1 cut(s) 1072
Bst2UI CCWGG 2 cut(s) 771, 829
Bst4CI ACNGT 3 cut(s) 115, 137, 364
Bst6I CTCTTC 3 cut(s) 501, 810, 1180
BstACI GRCGYC 1 cut(s) 1025
BstAUI TGTACA 2 cut(s) 252, 1017
BstBAI YACGTR 3 cut(s) 673, 937, 1154
BstC8I GCNNGC 3 cut(s) 108, 694, 1046
BstDEI CTNAG 2 cut(s) 846, 879
BstEII GGTNACC 1 cut(s) 724
BstF5I GGATG 4 cut(s) 252, 479, 798, 928
BstFNI CGCG 2 cut(s) 572, 894
BstH2I RGCGCY 1 cut(s) 1028
BstHHI GCGC 2 cut(s) 74, 1027
BstKTI GATC 7 cut(s) 67, 352, 439, 457, 703, 843, 1038
BstMAI GTCTC 3 cut(s) 45, 625, 1121
BstMBI GATC 7 cut(s) 64, 349, 436, 454, 700, 840, 1035
BstMWI GCNNNNNNNGC 2 cut(s) 88, 116
BstNI CCWGG 2 cut(s) 771, 829
BstPAI GACNNNNGTC 1 cut(s) 930
BstPI GGTNACC 1 cut(s) 724
BstSCI CCNGG 2 cut(s) 769, 827
BstSNI TACGTA 1 cut(s) 1154
BstUI CGCG 2 cut(s) 572, 894
BstV1I GCAGC 4 cut(s) 86, 131, 670, 747
BstXI CCANNNNNNTGG 3 cut(s) 190, 317, 835
BstZ17I GTATAC 1 cut(s) 1072
Bsu15I ATCGAT 1 cut(s) 453
Bsu36I CCTNAGG 1 cut(s) 879
BsuRI GGCC 4 cut(s) 110, 768, 827, 851
BsuTUI ATCGAT 1 cut(s) 453
BtgZI GCGATG 1 cut(s) 875
BtsCI GGATG 4 cut(s) 252, 479, 798, 928
BtsIMutI CAGTG 3 cut(s) 111, 360, 375
BtuMI TCGCGA 1 cut(s) 894
BveI ACCTGC 1 cut(s) 190
Cac8I GCNNGC 3 cut(s) 108, 694, 1046
CfoI GCGC 2 cut(s) 74, 1027
Cfr10I RCCGGY 1 cut(s) 106
Cfr13I GGNCC 3 cut(s) 328, 767, 1139
ClaI ATCGAT 1 cut(s) 453
CseI GACGC 2 cut(s) 650, 935
Csp6I GTAC 6 cut(s) 253, 335, 670, 1018, 1151, 1161
CviAII CATG 5 cut(s) 353, 552, 557, 853, 1021
CviQI GTAC 6 cut(s) 253, 335, 670, 1018, 1151, 1161
DdeI CTNAG 2 cut(s) 846, 879
DinI GGCGCC 1 cut(s) 1026
DpnI GATC 7 cut(s) 66, 351, 438, 456, 702, 842, 1037
DpnII GATC 7 cut(s) 64, 349, 436, 454, 700, 840, 1035
DriI GACNNNNNGTC 1 cut(s) 566
EaeI YGGCCR 2 cut(s) 108, 825
Eam1104I CTCTTC 3 cut(s) 501, 810, 1180
Eam1105I GACNNNNNGTC 1 cut(s) 566
EarI CTCTTC 3 cut(s) 501, 810, 1180
Ecl136II GAGCTC 2 cut(s) 640, 741
Eco105I TACGTA 1 cut(s) 1154
Eco24I GRGCYC 2 cut(s) 642, 743
Eco31I GGTCTC 1 cut(s) 45
Eco47I GGWCC 2 cut(s) 328, 1139
Eco53kI GAGCTC 2 cut(s) 640, 741
Eco81I CCTNAGG 1 cut(s) 879
Eco91I GGTNACC 1 cut(s) 724
EcoICRI GAGCTC 2 cut(s) 640, 741
EcoO65I GGTNACC 1 cut(s) 724
EcoRI GAATTC 1 cut(s) 593
EcoRII CCWGG 2 cut(s) 769, 827
EcoT22I ATGCAT 1 cut(s) 584
EcoT38I GRGCYC 2 cut(s) 642, 743
EgeI GGCGCC 1 cut(s) 1026
EheI GGCGCC 1 cut(s) 1026
FaeI CATG 5 cut(s) 356, 555, 560, 856, 1024
FatI CATG 5 cut(s) 352, 551, 556, 852, 1020
FauNDI CATATG 1 cut(s) 1012
FblI GTMKAC 3 cut(s) 179, 298, 1071
Fnu4HI GCNGC 5 cut(s) 75, 120, 131, 659, 761
FokI GGATG 4 cut(s) 259, 486, 805, 935
FriOI GRGCYC 2 cut(s) 642, 743
Fsp4HI GCNGC 5 cut(s) 75, 120, 131, 659, 761
FspBI CTAG 3 cut(s) 69, 440, 906
GlaI GCGC 2 cut(s) 73, 1026
GluI GCNGC 5 cut(s) 75, 120, 131, 659, 761
HaeII RGCGCY 1 cut(s) 1028
HaeIII GGCC 4 cut(s) 110, 768, 827, 851
HapII CCGG 1 cut(s) 107
HgaI GACGC 2 cut(s) 650, 935
HhaI GCGC 2 cut(s) 74, 1027
Hin1I GRCGYC 1 cut(s) 1025
Hin1II CATG 5 cut(s) 356, 555, 560, 856, 1024
Hin6I GCGC 2 cut(s) 72, 1025
HinP1I GCGC 2 cut(s) 72, 1025
HincII GTYRAC 2 cut(s) 157, 367
HindII GTYRAC 2 cut(s) 157, 367
HinfI GANTC 2 cut(s) 149, 602
HpaI GTTAAC 1 cut(s) 367
HpaII CCGG 1 cut(s) 107
HphI GGTGA 4 cut(s) 586, 736, 1045, 1208
Hpy166II GTNNAC 6 cut(s) 157, 180, 299, 367, 1018, 1072
Hpy188I TCNGA 3 cut(s) 27, 246, 436
Hpy188III TCNNGA 7 cut(s) 146, 440, 635, 736, 893, 970, 1081
Hpy8I GTNNAC 6 cut(s) 157, 180, 299, 367, 1018, 1072
HpyAV CCTTC 1 cut(s) 441
HpyCH4III ACNGT 3 cut(s) 115, 137, 364
HpyCH4IV ACGT 6 cut(s) 159, 647, 672, 936, 1153, 1163
HpyCH4V TGCA 5 cut(s) 415, 582, 763, 856, 947
HpyF10VI GCNNNNNNNGC 2 cut(s) 88, 116
HpyF3I CTNAG 2 cut(s) 846, 879
HpySE526I ACGT 6 cut(s) 159, 647, 672, 936, 1153, 1163
Hsp92I GRCGYC 1 cut(s) 1025
Hsp92II CATG 5 cut(s) 356, 555, 560, 856, 1024
HspAI GCGC 2 cut(s) 72, 1025
KasI GGCGCC 1 cut(s) 1024
KroI GCCGGC 1 cut(s) 106
KroNI GCCGGC 1 cut(s) 108
KspAI GTTAAC 1 cut(s) 367
Kzo9I GATC 7 cut(s) 64, 349, 436, 454, 700, 840, 1035
LmnI GCTCC 2 cut(s) 127, 525
Lsp1109I GCAGC 4 cut(s) 86, 131, 670, 747
LweI GCATC 1 cut(s) 433
MaeI CTAG 3 cut(s) 69, 440, 906
MaeII ACGT 6 cut(s) 159, 647, 672, 936, 1153, 1163
MaeIII GTNAC 4 cut(s) 85, 724, 932, 956
MalI GATC 7 cut(s) 66, 351, 438, 456, 702, 842, 1037
MboI GATC 7 cut(s) 64, 349, 436, 454, 700, 840, 1035
MboII GAAGA 6 cut(s) 40, 518, 523, 827, 878, 1167
MfeI CAATTG 1 cut(s) 395
MhlI GDGCHC 3 cut(s) 530, 642, 743
MlsI TGGCCA 1 cut(s) 827
MluCI AATT 8 cut(s) 8, 60, 221, 263, 395, 500, 593, 1111
MluNI TGGCCA 1 cut(s) 827
Mly113I GGCGCC 1 cut(s) 1025
MmeI TCCRAC 2 cut(s) 68, 171
Mox20I TGGCCA 1 cut(s) 827
Mph1103I ATGCAT 1 cut(s) 584
MroNI GCCGGC 1 cut(s) 106
MscI TGGCCA 1 cut(s) 827
MseI TTAA 4 cut(s) 366, 1166, 1203, 1222
Msp20I TGGCCA 1 cut(s) 827
MspA1I CMGCKG 1 cut(s) 122
MspI CCGG 1 cut(s) 107
MspR9I CCNGG 2 cut(s) 771, 829
MunI CAATTG 1 cut(s) 395
MvaI CCWGG 2 cut(s) 771, 829
MvnI CGCG 2 cut(s) 572, 894
MwoI GCNNNNNNNGC 2 cut(s) 88, 116
NaeI GCCGGC 1 cut(s) 108
NarI GGCGCC 1 cut(s) 1025
NdeI CATATG 1 cut(s) 1012
NdeII GATC 7 cut(s) 64, 349, 436, 454, 700, 840, 1035
NgoMIV GCCGGC 1 cut(s) 106
NlaIII CATG 5 cut(s) 356, 555, 560, 856, 1024
NlaIV GGNNCC 2 cut(s) 129, 1026
NmeAIII GCCGAG 1 cut(s) 81
NmuCI GTSAC 3 cut(s) 724, 932, 956
NruI TCGCGA 1 cut(s) 894
NsiI ATGCAT 1 cut(s) 584
PaqCI CACCTGC 1 cut(s) 190
PcsI WCGNNNNNNNCGW 2 cut(s) 53, 933
PdiI GCCGGC 1 cut(s) 108
PfeI GAWTC 2 cut(s) 149, 602
PkrI GCNGC 5 cut(s) 76, 121, 132, 660, 762
PluTI GGCGCC 1 cut(s) 1028
Ppu21I YACGTR 3 cut(s) 673, 937, 1154
PshAI GACNNNNGTC 1 cut(s) 930
PsiI TTATAA 1 cut(s) 1103
Psp124BI GAGCTC 2 cut(s) 642, 743
Psp1406I AACGTT 1 cut(s) 159
Psp6I CCWGG 2 cut(s) 769, 827
PspEI GGTNACC 1 cut(s) 724
PspGI CCWGG 2 cut(s) 769, 827
PspN4I GGNNCC 2 cut(s) 129, 1026
PspPI GGNCC 3 cut(s) 328, 767, 1139
PvuII CAGCTG 1 cut(s) 122
RruI TCGCGA 1 cut(s) 894
RsaI GTAC 6 cut(s) 254, 336, 671, 1019, 1152, 1162
RsaNI GTAC 6 cut(s) 253, 335, 670, 1018, 1151, 1161
SacI GAGCTC 2 cut(s) 642, 743
SaqAI TTAA 4 cut(s) 366, 1166, 1203, 1222
SatI GCNGC 5 cut(s) 75, 120, 131, 659, 761
Sau3AI GATC 7 cut(s) 64, 349, 436, 454, 700, 840, 1035
Sau96I GGNCC 3 cut(s) 328, 767, 1139
ScrFI CCNGG 2 cut(s) 771, 829
SduI GDGCHC 3 cut(s) 530, 642, 743
SfaNI GCATC 1 cut(s) 433
SfoI GGCGCC 1 cut(s) 1026
SinI GGWCC 2 cut(s) 328, 1139
SmlI CTYRAG 4 cut(s) 633, 736, 970, 1180
SmoI CTYRAG 4 cut(s) 633, 736, 970, 1180
SnaBI TACGTA 1 cut(s) 1154
Sse9I AATT 8 cut(s) 8, 60, 221, 263, 395, 500, 593, 1111
SsiI CCGC 2 cut(s) 131, 572
SspDI GGCGCC 1 cut(s) 1024
SspMI CTAG 3 cut(s) 69, 440, 906
SstI GAGCTC 2 cut(s) 642, 743
StyD4I CCNGG 2 cut(s) 769, 827
TaaI ACNGT 3 cut(s) 115, 137, 364
TaiI ACGT 6 cut(s) 162, 650, 675, 939, 1156, 1166
TaqI TCGA 5 cut(s) 145, 167, 453, 642, 743
TaqII GACCGA 2 cut(s) 142, 743
TasI AATT 8 cut(s) 8, 60, 221, 263, 395, 500, 593, 1111
TatI WGTACW 3 cut(s) 252, 334, 1017
TauI GCSGC 1 cut(s) 133
TfiI GAWTC 2 cut(s) 149, 602
Tru1I TTAA 4 cut(s) 366, 1166, 1203, 1222
Tru9I TTAA 4 cut(s) 366, 1166, 1203, 1222
TscAI CASTG 3 cut(s) 118, 367, 382
TseFI GTSAC 3 cut(s) 724, 932, 956
TseI GCWGC 4 cut(s) 74, 119, 658, 760
Tsp45I GTSAC 3 cut(s) 724, 932, 956
TspDTI ATGAA 5 cut(s) 17, 469, 668, 878, 1211
TspRI CASTG 3 cut(s) 118, 367, 382
VpaK11BI GGWCC 2 cut(s) 328, 1139
XapI RAATTY 3 cut(s) 8, 500, 593
XbaI TCTAGA 1 cut(s) 439
XmiI GTMKAC 3 cut(s) 179, 298, 1071
XspI CTAG 3 cut(s) 69, 440, 906
Zsp2I ATGCAT 1 cut(s) 584
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.