Rh6BG122400

WAT1-related protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Forward (+)
19083697 .. 19083999
303 bp
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UTR
Exon/CDS
Intron
Rh6BG122400.1

Sequence Viewer

Length: 216 bp
ATGGCAACAGCCATGCCTAATCTTGCTCCGGGAAGTATTTGTGTTATCGCTTGTACTGTTAGATTGGAGAGAGTAAAACTTAGTTGTGTATACAGCAAAGTGAAGATTCTAGGCACATTGTTGTGTGTGGTAAGCGCTTTCACAATGAGCATAATGCAAAGCAGGTACCACTTCCGCCCCAGCAACAAAGATTCAATATCAAGCTCATTCTCCTGA

Protein Analysis

71

Amino Acids

7.75

Weight (kDa)

9.62

Isoelectric Point (pI)

58.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 153
Acc65I GGTACC 1 cut(s) 165
AccB1I GGYRCC 1 cut(s) 165
AccI GTMKAC 1 cut(s) 90
AciI CCGC 1 cut(s) 175
AfaI GTAC 2 cut(s) 55, 167
AfeI AGCGCT 1 cut(s) 136
AgsI TTSAA 1 cut(s) 195
AluBI AGCT 1 cut(s) 204
AluI AGCT 1 cut(s) 204
Aor51HI AGCGCT 1 cut(s) 136
Asp718I GGTACC 1 cut(s) 165
AspLEI GCGC 1 cut(s) 137
AsuC2I CCSGG 1 cut(s) 30
BanI GGYRCC 1 cut(s) 165
BcnI CCSGG 1 cut(s) 30
BfaI CTAG 1 cut(s) 110
BfoI RGCGCY 1 cut(s) 138
BfuAI ACCTGC 1 cut(s) 153
Bme1390I CCNGG 1 cut(s) 30
BmiI GGNNCC 1 cut(s) 167
BmrFI CCNGG 1 cut(s) 30
BpuMI CCSGG 1 cut(s) 30
BseYI CCCAGC 1 cut(s) 179
BshNI GGYRCC 1 cut(s) 165
BsiSI CCGG 1 cut(s) 29
BspACI CCGC 1 cut(s) 175
BspLI GGNNCC 1 cut(s) 167
BspMI ACCTGC 1 cut(s) 153
BspT107I GGYRCC 1 cut(s) 165
BssNAI GTATAC 1 cut(s) 91
Bst1107I GTATAC 1 cut(s) 91
Bst4CI ACNGT 1 cut(s) 58
BstDEI CTNAG 1 cut(s) 80
BstH2I RGCGCY 1 cut(s) 138
BstHHI GCGC 1 cut(s) 137
BstSCI CCNGG 1 cut(s) 28
BstZ17I GTATAC 1 cut(s) 91
BveI ACCTGC 1 cut(s) 153
CfoI GCGC 1 cut(s) 137
Csp6I GTAC 2 cut(s) 54, 166
CviAII CATG 1 cut(s) 13
CviJI RGCY 2 cut(s) 11, 204
CviKI_1 RGCY 2 cut(s) 11, 204
CviQI GTAC 2 cut(s) 54, 166
DdeI CTNAG 1 cut(s) 80
EciI GGCGGA 1 cut(s) 164
Eco47III AGCGCT 1 cut(s) 136
FaeI CATG 1 cut(s) 16
FaiI YATR 3 cut(s) 14, 91, 152
FatI CATG 1 cut(s) 12
FblI GTMKAC 1 cut(s) 90
FspBI CTAG 1 cut(s) 110
GlaI GCGC 1 cut(s) 136
GsaI CCCAGC 1 cut(s) 183
HaeII RGCGCY 1 cut(s) 138
HapII CCGG 1 cut(s) 29
HhaI GCGC 1 cut(s) 137
Hin1II CATG 1 cut(s) 16
Hin6I GCGC 1 cut(s) 135
HinP1I GCGC 1 cut(s) 135
HinfI GANTC 2 cut(s) 106, 191
HpaII CCGG 1 cut(s) 29
Hpy166II GTNNAC 1 cut(s) 91
Hpy188III TCNNGA 1 cut(s) 213
Hpy8I GTNNAC 1 cut(s) 91
HpyCH4III ACNGT 1 cut(s) 58
HpyCH4V TGCA 1 cut(s) 157
HpyF3I CTNAG 1 cut(s) 80
Hsp92II CATG 1 cut(s) 16
HspAI GCGC 1 cut(s) 135
KpnI GGTACC 1 cut(s) 169
LmnI GCTCC 1 cut(s) 31
LpnPI CCDG 3 cut(s) 42, 148, 193
MaeI CTAG 1 cut(s) 110
MboII GAAGA 1 cut(s) 115
MslI CAYNNNNRTG 1 cut(s) 121
MspI CCGG 1 cut(s) 29
MspR9I CCNGG 1 cut(s) 30
NciI CCSGG 1 cut(s) 30
NlaIII CATG 1 cut(s) 16
NlaIV GGNNCC 1 cut(s) 167
PfeI GAWTC 2 cut(s) 106, 191
PfoI TCCNGGA 1 cut(s) 28
PspFI CCCAGC 1 cut(s) 179
PspN4I GGNNCC 1 cut(s) 167
RsaI GTAC 2 cut(s) 55, 167
RsaNI GTAC 2 cut(s) 54, 166
RseI CAYNNNNRTG 1 cut(s) 121
ScrFI CCNGG 1 cut(s) 30
SetI ASST 2 cut(s) 167, 206
SgeI CNNG 8 cut(s) 25, 35, 41, 42, 63, 122, 175, 192
SmiMI CAYNNNNRTG 1 cut(s) 121
SsiI CCGC 1 cut(s) 175
SspMI CTAG 1 cut(s) 110
StyD4I CCNGG 1 cut(s) 28
TaaI ACNGT 1 cut(s) 58
TatI WGTACW 1 cut(s) 53
TfiI GAWTC 2 cut(s) 106, 191
XmiI GTMKAC 1 cut(s) 90
XspI CTAG 1 cut(s) 110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.