Rh6CG250100

ZINC FINGER protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Forward (+)
42046258 .. 42047708
1451 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG250100.1

Sequence Viewer

Length: 1077 bp
ATGCACAATCCCGACCTCGATTTCCGACACCCCACTCCACCACCACCACCAACACCGCCACCATTACCAACTCAACCCCACCACTACCCAAACGTCGTCGTTTCCGTCCCTACCGCCGTCCCTTTCGCTTCTTCATCTTCTACTTCCTTCAACTTCCCCGAGAGCAACAATGCCCCACAACCCCACCAGCAAAACCCTCGAAAGAAGCGCTCCAAACTGATGAGGCCCGACGCCGACAACCCTGCCAAGCGGCCCAAGTCCGCCAAGAAACCCGACCCGGCCGCTCCCAAGATCACCACGCCGTGCAGCGAGTGCGGCAGGAAGTTCTGGTCATGGAAGGCTCTCTTCGGCCACATGCGCTGCCACCCTGAACGCCACTGGCGCGGAATCCAACCTCCGCCGGATTTCCAACCAGCCGGTTCGCCGCCGAACCCGGTCCTTCCCGACTTGGAGCTCTCAATGAGCGAAGACGACCACGACGCCGCCTCTAGCTTGTTGATTCTTGCCAGCGGCACCGACCAAACTCAACTCCCTGGTACTAGTTCACAAGGCCTTCGAGAAAACTACTCCGGCGGCTGTCGTTTCGAGTGTTCCAGTTGCAAGAAAGTGTTCGGGTCCCACCAGGCCTTGGGAGGCCATAGGGCGAGCCACAAGAACGTGAAGGGTTGTTTCGCGATTACAAAGAGTGATGTGGAGGTGGATGAGGAGCTTCATCATCATCTTCAGCATGGTAATGTAGTAATGGCTAGTCGTAGCTGTGGCGTTGATGATAGTAATGTTGATGATGTGACGGAGGAGAATAACAAGATGGTTATGGCGGTCGAGTCGGGGCACCAGTGTAGCATTTGCTGGAGGGTGTTTTCGAGTGGGCAAGCTTTGGGCGGGCACAAGAGGTGTCATTGGGAGAAAGGGGAAGAGGCGTCAGTGGTGATGACACAACTTGGGATCAGCAACAACACTAATTCTGGTGGGCTGGACTTGAACTTGCCTGCTGCTGCCGCTCCTGCTCCTGCAACTGAAGACGATCAGTCGTATACGTCTCCAGGCCTGGCCTTGGACTTGAGGTTGGGTCTTTGA

Protein Analysis

358

Amino Acids

38.8

Weight (kDa)

6.54

Isoelectric Point (pI)

61.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C2H2_6 PF13912 100 - 124 2.3e-06 C2H2-type zinc finger
zf-C2H2_6 PF13912 194 - 218 7.5e-10 C2H2-type zinc finger
zf-C2H2_6 PF13912 278 - 302 1.6e-09 C2H2-type zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 512, 831
AccB7I CCANNNNNTGG 1 cut(s) 628
AccBSI CCGCTC 2 cut(s) 284, 1001
AccI GTMKAC 1 cut(s) 1034
AccII CGCG 2 cut(s) 384, 674
AclWI GGATC 1 cut(s) 953
AcoI YGGCCR 2 cut(s) 279, 349
AcuI CTGAAG 2 cut(s) 707, 1038
AcyI GRCGYC 3 cut(s) 231, 480, 920
AdeI CACNNNGTG 1 cut(s) 303
AfaI GTAC 1 cut(s) 538
AfeI AGCGCT 1 cut(s) 209
AfiI CCNNNNNNNGG 2 cut(s) 628, 1054
AgsI TTSAA 2 cut(s) 151, 982
AhdI GACNNNNNGTC 1 cut(s) 1027
AhlI ACTAGT 1 cut(s) 539
AjnI CCWGG 4 cut(s) 532, 621, 1042, 1047
AluBI AGCT 5 cut(s) 454, 492, 709, 756, 875
AluI AGCT 5 cut(s) 454, 492, 709, 756, 875
Alw21I GWGCWC 1 cut(s) 456
Alw26I GTCTC 1 cut(s) 1044
AlwI GGATC 1 cut(s) 953
Ama87I CYCGRG 1 cut(s) 158
Aor51HI AGCGCT 1 cut(s) 209
AoxI GGCC 9 cut(s) 224, 251, 279, 349, 550, 624, 634, 1045, 1050
ApeKI GCWGC 4 cut(s) 306, 360, 992, 995
Asp700I GAANNNNTTC 1 cut(s) 608
AspLEI GCGC 3 cut(s) 210, 360, 384
AspS9I GGNCC 4 cut(s) 225, 252, 436, 615
AsuC2I CCSGG 2 cut(s) 278, 434
AsuHPI GGTGA 2 cut(s) 286, 940
AvaI CYCGRG 1 cut(s) 158
AvaII GGWCC 2 cut(s) 436, 615
BaeGI GKGCMC 2 cut(s) 834, 888
BanI GGYRCC 2 cut(s) 512, 831
BanII GRGCYC 1 cut(s) 456
BbsI GAAGAC 2 cut(s) 474, 1026
Bbv12I GWGCWC 1 cut(s) 456
BbvI GCAGC 4 cut(s) 318, 347, 979, 982
BccI CCATC 1 cut(s) 802
BceAI ACGGC 2 cut(s) 101, 286
BcgI CGANNNNNNTGC 4 cut(s) 179, 213, 224, 258
BciT130I CCWGG 4 cut(s) 534, 623, 1044, 1049
BcnI CCSGG 2 cut(s) 278, 434
BcoDI GTCTC 1 cut(s) 1044
BcuI ACTAGT 1 cut(s) 539
BfaI CTAG 3 cut(s) 489, 540, 747
BfoI RGCGCY 1 cut(s) 211
Bme1390I CCNGG 6 cut(s) 278, 434, 534, 623, 1044, 1049
Bme18I GGWCC 2 cut(s) 436, 615
BmeRI GACNNNNNGTC 1 cut(s) 1027
BmeT110I CYCGRG 1 cut(s) 158
BmgT120I GGNCC 4 cut(s) 225, 252, 436, 615
BmiI GGNNCC 4 cut(s) 514, 616, 617, 833
BmrFI CCNGG 6 cut(s) 278, 434, 534, 623, 1044, 1049
BpiI GAAGAC 2 cut(s) 474, 1026
BpmI CTGGAG 2 cut(s) 871, 1026
BpuMI CCSGG 2 cut(s) 278, 434
BsaHI GRCGYC 3 cut(s) 231, 480, 920
BsaJI CCNNGG 3 cut(s) 532, 627, 1053
Bsc4I CCNNNNNNNGG 2 cut(s) 628, 1054
Bse118I RCCGGY 1 cut(s) 416
Bse1I ACTGG 3 cut(s) 383, 594, 835
BseBI CCWGG 4 cut(s) 534, 623, 1044, 1049
BseDI CCNNGG 3 cut(s) 532, 627, 1053
BseGI GGATG 1 cut(s) 706
BseLI CCNNNNNNNGG 2 cut(s) 628, 1054
BseNI ACTGG 3 cut(s) 383, 594, 835
BseRI GAGGAG 2 cut(s) 719, 809
BseSI GKGCMC 2 cut(s) 834, 888
BseX3I CGGCCG 1 cut(s) 279
BseXI GCAGC 4 cut(s) 318, 347, 979, 982
BsgI GTGCAG 1 cut(s) 325
Bsh1236I CGCG 2 cut(s) 384, 674
Bsh1285I CGRYCG 2 cut(s) 282, 822
BshFI GGCC 9 cut(s) 226, 253, 281, 351, 552, 626, 636, 1047, 1052
BshNI GGYRCC 2 cut(s) 512, 831
BsiEI CGRYCG 2 cut(s) 282, 822
BsiHKAI GWGCWC 1 cut(s) 456
BsiHKCI CYCGRG 1 cut(s) 158
BsiSI CCGG 5 cut(s) 278, 401, 417, 434, 570
BslFI GGGAC 3 cut(s) 92, 104, 601
BslI CCNNNNNNNGG 2 cut(s) 628, 1054
BsmAI GTCTC 1 cut(s) 1044
BsmBI CGTCTC 1 cut(s) 1044
BsmFI GGGAC 3 cut(s) 92, 104, 601
BsnI GGCC 9 cut(s) 226, 253, 281, 351, 552, 626, 636, 1047, 1052
BsoBI CYCGRG 1 cut(s) 158
Bsp1286I GDGCHC 3 cut(s) 456, 834, 888
Bsp143I GATC 3 cut(s) 291, 945, 1024
Bsp68I TCGCGA 1 cut(s) 674
BspANI GGCC 9 cut(s) 226, 253, 281, 351, 552, 626, 636, 1047, 1052
BspFNI CGCG 2 cut(s) 384, 674
BspLI GGNNCC 4 cut(s) 514, 616, 617, 833
BspPI GGATC 1 cut(s) 953
BspT107I GGYRCC 2 cut(s) 512, 831
BsrBI CCGCTC 2 cut(s) 284, 1001
BsrFI RCCGGY 1 cut(s) 416
BsrI ACTGG 3 cut(s) 383, 594, 835
BssAI RCCGGY 1 cut(s) 416
BssECI CCNNGG 3 cut(s) 532, 627, 1053
BssMI GATC 3 cut(s) 291, 945, 1024
BssNAI GTATAC 1 cut(s) 1035
BssNI GRCGYC 3 cut(s) 231, 480, 920
BssT1I CCWWGG 2 cut(s) 627, 1053
Bst1107I GTATAC 1 cut(s) 1035
Bst2UI CCWGG 4 cut(s) 534, 623, 1044, 1049
Bst6I CTCTTC 2 cut(s) 350, 909
BstACI GRCGYC 3 cut(s) 231, 480, 920
BstAPI GCANNNNNTGC 1 cut(s) 312
BstC8I GCNNGC 5 cut(s) 508, 646, 873, 884, 990
BstF5I GGATG 1 cut(s) 706
BstFNI CGCG 2 cut(s) 384, 674
BstH2I RGCGCY 1 cut(s) 211
BstHHI GCGC 3 cut(s) 210, 360, 384
BstKTI GATC 3 cut(s) 294, 948, 1027
BstMAI GTCTC 1 cut(s) 1044
BstMBI GATC 3 cut(s) 291, 945, 1024
BstMCI CGRYCG 2 cut(s) 282, 822
BstMWI GCNNNNNNNGC 6 cut(s) 312, 315, 357, 381, 998, 1004
BstNI CCWGG 4 cut(s) 534, 623, 1044, 1049
BstNSI RCATGY 1 cut(s) 358
BstSCI CCNGG 6 cut(s) 276, 432, 532, 621, 1042, 1047
BstSLI GKGCMC 2 cut(s) 834, 888
BstUI CGCG 2 cut(s) 384, 674
BstV1I GCAGC 4 cut(s) 318, 347, 979, 982
BstV2I GAAGAC 2 cut(s) 474, 1026
BstZ17I GTATAC 1 cut(s) 1035
BstZI CGGCCG 1 cut(s) 279
BsuRI GGCC 9 cut(s) 226, 253, 281, 351, 552, 626, 636, 1047, 1052
BtsCI GGATG 1 cut(s) 706
BtsIMutI CAGTG 3 cut(s) 376, 842, 930
BtuMI TCGCGA 1 cut(s) 674
Cac8I GCNNGC 5 cut(s) 508, 646, 873, 884, 990
CfoI GCGC 3 cut(s) 210, 360, 384
Cfr10I RCCGGY 1 cut(s) 416
Cfr13I GGNCC 4 cut(s) 225, 252, 436, 615
CseI GACGC 3 cut(s) 239, 488, 909
Csp6I GTAC 1 cut(s) 537
CviAII CATG 3 cut(s) 333, 355, 728
CviQI GTAC 1 cut(s) 537
DpnI GATC 3 cut(s) 293, 947, 1026
DpnII GATC 3 cut(s) 291, 945, 1024
DraIII CACNNNGTG 1 cut(s) 303
DriI GACNNNNNGTC 1 cut(s) 1027
EaeI YGGCCR 2 cut(s) 279, 349
EagI CGGCCG 1 cut(s) 279
Eam1104I CTCTTC 2 cut(s) 350, 909
Eam1105I GACNNNNNGTC 1 cut(s) 1027
EarI CTCTTC 2 cut(s) 350, 909
EciI GGCGGA 2 cut(s) 250, 387
Ecl136II GAGCTC 1 cut(s) 454
EclXI CGGCCG 1 cut(s) 279
Eco130I CCWWGG 2 cut(s) 627, 1053
Eco147I AGGCCT 3 cut(s) 552, 626, 1047
Eco24I GRGCYC 1 cut(s) 456
Eco47I GGWCC 2 cut(s) 436, 615
Eco47III AGCGCT 1 cut(s) 209
Eco52I CGGCCG 1 cut(s) 279
Eco53kI GAGCTC 1 cut(s) 454
Eco57I CTGAAG 2 cut(s) 707, 1038
Eco88I CYCGRG 1 cut(s) 158
EcoICRI GAGCTC 1 cut(s) 454
EcoO109I RGGNCCY 1 cut(s) 615
EcoRII CCWGG 4 cut(s) 532, 621, 1042, 1047
EcoT14I CCWWGG 2 cut(s) 627, 1053
EcoT38I GRGCYC 1 cut(s) 456
ErhI CCWWGG 2 cut(s) 627, 1053
Esp3I CGTCTC 1 cut(s) 1044
FaeI CATG 3 cut(s) 336, 358, 731
FaiI YATR 6 cut(s) 334, 356, 639, 729, 815, 1035
FalI AAGNNNNNCTT 2 cut(s) 329, 361
FaqI GGGAC 3 cut(s) 92, 104, 601
FatI CATG 3 cut(s) 332, 354, 727
FauI CCCGC 1 cut(s) 875
FblI GTMKAC 1 cut(s) 1034
FokI GGATG 1 cut(s) 713
FriOI GRGCYC 1 cut(s) 456
FspBI CTAG 3 cut(s) 489, 540, 747
GlaI GCGC 3 cut(s) 209, 359, 383
GsuI CTGGAG 2 cut(s) 871, 1026
HaeII RGCGCY 1 cut(s) 211
HaeIII GGCC 9 cut(s) 226, 253, 281, 351, 552, 626, 636, 1047, 1052
HapII CCGG 5 cut(s) 278, 401, 417, 434, 570
HgaI GACGC 3 cut(s) 239, 488, 909
HhaI GCGC 3 cut(s) 210, 360, 384
Hin1I GRCGYC 3 cut(s) 231, 480, 920
Hin1II CATG 3 cut(s) 336, 358, 731
Hin6I GCGC 3 cut(s) 208, 358, 382
HinP1I GCGC 3 cut(s) 208, 358, 382
HindIII AAGCTT 1 cut(s) 873
HinfI GANTC 3 cut(s) 387, 499, 824
HpaII CCGG 5 cut(s) 278, 401, 417, 434, 570
HphI GGTGA 2 cut(s) 286, 940
Hpy166II GTNNAC 2 cut(s) 545, 1035
Hpy188I TCNGA 1 cut(s) 26
Hpy188III TCNNGA 4 cut(s) 11, 443, 557, 673
Hpy8I GTNNAC 2 cut(s) 545, 1035
Hpy99I CGWCG 4 cut(s) 98, 101, 233, 482
HpyAV CCTTC 5 cut(s) 157, 331, 449, 563, 655
HpyCH4IV ACGT 3 cut(s) 93, 657, 1037
HpyCH4V TGCA 4 cut(s) 4, 306, 600, 1013
HpyF10VI GCNNNNNNNGC 6 cut(s) 312, 315, 357, 381, 998, 1004
HpySE526I ACGT 3 cut(s) 93, 657, 1037
Hsp92I GRCGYC 3 cut(s) 231, 480, 920
Hsp92II CATG 3 cut(s) 336, 358, 731
HspAI GCGC 3 cut(s) 208, 358, 382
KflI GGGWCCC 1 cut(s) 615
Kzo9I GATC 3 cut(s) 291, 945, 1024
LmnI GCTCC 6 cut(s) 215, 289, 451, 706, 1006, 1012
Lsp1109I GCAGC 4 cut(s) 318, 347, 979, 982
MaeI CTAG 3 cut(s) 489, 540, 747
MaeII ACGT 3 cut(s) 93, 657, 1037
MaeIII GTNAC 1 cut(s) 787
MalI GATC 3 cut(s) 293, 947, 1026
MbiI CCGCTC 2 cut(s) 284, 1001
MboI GATC 3 cut(s) 291, 945, 1024
MboII GAAGA 7 cut(s) 123, 129, 337, 479, 713, 926, 1031
MhlI GDGCHC 3 cut(s) 456, 834, 888
MluCI AATT 1 cut(s) 961
MlyI GAGTC 1 cut(s) 833
MmeI TCCRAC 3 cut(s) 49, 415, 433
MroXI GAANNNNTTC 1 cut(s) 608
MslI CAYNNNNRTG 1 cut(s) 732
MspA1I CMGCKG 1 cut(s) 510
MspI CCGG 5 cut(s) 278, 401, 417, 434, 570
MspR9I CCNGG 6 cut(s) 278, 434, 534, 623, 1044, 1049
MvaI CCWGG 4 cut(s) 534, 623, 1044, 1049
MvnI CGCG 2 cut(s) 384, 674
MwoI GCNNNNNNNGC 6 cut(s) 312, 315, 357, 381, 998, 1004
NciI CCSGG 2 cut(s) 278, 434
NdeII GATC 3 cut(s) 291, 945, 1024
NlaIII CATG 3 cut(s) 336, 358, 731
NlaIV GGNNCC 4 cut(s) 514, 616, 617, 833
NmuCI GTSAC 1 cut(s) 787
NruI TCGCGA 1 cut(s) 674
NspI RCATGY 1 cut(s) 358
PceI AGGCCT 3 cut(s) 552, 626, 1047
PcsI WCGNNNNNNNCGW 1 cut(s) 102
PdmI GAANNNNTTC 1 cut(s) 608
PfeI GAWTC 2 cut(s) 387, 499
PflMI CCANNNNNTGG 1 cut(s) 628
PleI GAGTC 1 cut(s) 832
PpsI GAGTC 1 cut(s) 832
PpuMI RGGWCCY 1 cut(s) 615
Psp124BI GAGCTC 1 cut(s) 456
Psp5II RGGWCCY 1 cut(s) 615
Psp6I CCWGG 4 cut(s) 532, 621, 1042, 1047
PspGI CCWGG 4 cut(s) 532, 621, 1042, 1047
PspN4I GGNNCC 4 cut(s) 514, 616, 617, 833
PspPI GGNCC 4 cut(s) 225, 252, 436, 615
PspPPI RGGWCCY 1 cut(s) 615
RruI TCGCGA 1 cut(s) 674
RsaI GTAC 1 cut(s) 538
RsaNI GTAC 1 cut(s) 537
RseI CAYNNNNRTG 1 cut(s) 732
SacI GAGCTC 1 cut(s) 456
Sau3AI GATC 3 cut(s) 291, 945, 1024
Sau96I GGNCC 4 cut(s) 225, 252, 436, 615
SchI GAGTC 1 cut(s) 833
ScrFI CCNGG 6 cut(s) 278, 434, 534, 623, 1044, 1049
SduI GDGCHC 3 cut(s) 456, 834, 888
SinI GGWCC 2 cut(s) 436, 615
SmiMI CAYNNNNRTG 1 cut(s) 732
SmlI CTYRAG 1 cut(s) 1060
SmoI CTYRAG 1 cut(s) 1060
SpeI ACTAGT 1 cut(s) 539
Sse9I AATT 1 cut(s) 961
SseBI AGGCCT 3 cut(s) 552, 626, 1047
SspMI CTAG 3 cut(s) 489, 540, 747
SstI GAGCTC 1 cut(s) 456
StuI AGGCCT 3 cut(s) 552, 626, 1047
StyD4I CCNGG 6 cut(s) 276, 432, 532, 621, 1042, 1047
StyI CCWWGG 2 cut(s) 627, 1053
TaiI ACGT 3 cut(s) 96, 660, 1040
TaqI TCGA 6 cut(s) 18, 199, 556, 585, 822, 863
TasI AATT 1 cut(s) 961
TauI GCSGC 8 cut(s) 253, 284, 318, 427, 485, 513, 576, 1001
TfiI GAWTC 2 cut(s) 387, 499
TscAI CASTG 3 cut(s) 383, 842, 930
TseFI GTSAC 1 cut(s) 787
TseI GCWGC 4 cut(s) 306, 360, 992, 995
Tsp45I GTSAC 1 cut(s) 787
TspDTI ATGAA 2 cut(s) 123, 701
TspGWI ACGGA 2 cut(s) 94, 806
TspRI CASTG 3 cut(s) 383, 842, 930
Van91I CCANNNNNTGG 1 cut(s) 628
VpaK11BI GGWCC 2 cut(s) 436, 615
XceI RCATGY 1 cut(s) 358
XmiI GTMKAC 1 cut(s) 1034
XmnI GAANNNNTTC 1 cut(s) 608
XspI CTAG 3 cut(s) 489, 540, 747
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.