Rh6DG127300

Ring finger

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Forward (+)
17974533 .. 17978038
3506 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG127300.1

Sequence Viewer

Length: 1326 bp
ATGGGGTCTGCTTGTTGTGTCGCTGCTAGAGACAAGACAATAACAACCAGAGCTAATAGTGAAAATCTGCATCGTAATGTTCGATATTCACCCACGTGGAGCTTTCGATGGGATAACAGAGTTGGGGTGGCAGCTGAAGAGACTTCTGTAAGTTGGCTTTCTGATGGGATTAGCAGAAATGATGGATCTGAAGTTAAATTTGAGTCGGCATGTGTATCAGAAGAGGGAAGTCCGTTGGAACATTTACAAAGACATGCCACGCAGAAGTCTTCAGTTTCTGAAGGAACTGCTGGGAGTGTGAGAACCCCTGCTTCAGATCAATCTATTTCAAGAAACATTTCCATGGATGCCAGTCTAGAACAGGTAGATCATATGCGAACAAAGGAGTCAACGGAATCCCCAACAGTGTCATACCCGTCTCCTGCAAAGCTATCAGTTTCATTGCCTTCTACTTCATCCTTGTCCGCGTCCCCGTTGTCATCCCAATATCACCTGCCTCCTGCTAGCTCAACCCCGTCGAGATGGCCTCGCTGTTCTCCTAGACATCAGCTATTAAGGCAAGTATCTGACAGCCGAATTCCAGTAAACAAATCACCAAGCTACCTCTCAATATCTGAAGATAGGGCAAGGCTCCCTTCATGGAGCAATGAATCTGCTAGGGGCTCCCGTGGTGGGTCTTCAGATAGTTGGTCTATGCATGCATTTTCTGAGCTCATGGCCACATCTAATAGAGAAAGGTGGTCTTTTGATAGTGAATCCTTTGGCTTTAATCGTGAGAAGATAACTAGATCCAATAGCAGAATATCAGCTTCCCCCTCCGTTGATTTGCAGACATGTGGGATTTGCTCAAAGCTATTAACTGAGAAATCTTCGTGGAGTGGCCAAAAGTTTATTGTGAACAATGAGCTCTCTGTGGTTGCAGTGCTAACATGTGGGCATTCTTATCACGCTGAGTGTTTGGAGCATATGACGCCTGATATCAACAAGTATGACCCAGCTTGCCCTGTTTGCACCTTTGGGGAGAAACAGATCCATAAGTTGTCCGAAAAGGCATTGAAAGCTGAAATGGATTTGAAGGCTAGAAATAGGAGATCAAGGAATCGGGTGCTAGATCTTGATAGTGATTCTGCTGTGTTTGATCGCTTGAAAGGCAGTGGACATCAAGGAAAGGGTCCTAAGATGGCATCCAGTTCCAGCATGAGAAACTCCTCGGGAAAGCCTTTTTTGAGACGGCTCTCATTTGGCTCCAAGAGTGCTCGAGCCCTGTCGGAGAATCATTCTACCAGAAAGAAGGGGTTCTTCTGGGCAAAATCTAGCAAGATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

441

Amino Acids

48.62

Weight (kDa)

9.49

Isoelectric Point (pI)

66.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 501
Acc36I ACCTGC 1 cut(s) 501
AccII CGCG 1 cut(s) 467
AciI CCGC 1 cut(s) 465
AclWI GGATC 3 cut(s) 193, 783, 1024
AcoI YGGCCR 2 cut(s) 717, 880
AcsI RAATTY 2 cut(s) 197, 576
AcuI CTGAAG 7 cut(s) 156, 210, 255, 297, 300, 636, 663
AcvI CACGTG 1 cut(s) 96
AcyI GRCGYC 1 cut(s) 971
AfiI CCNNNNNNNGG 1 cut(s) 672
AflIII ACRYGT 2 cut(s) 833, 929
AgsI TTSAA 4 cut(s) 330, 1057, 1075, 1147
AleI CACNNNNGTG 1 cut(s) 94
Alw21I GWGCWC 3 cut(s) 714, 909, 1258
Alw26I GTCTC 4 cut(s) 24, 134, 423, 1222
AlwI GGATC 3 cut(s) 193, 783, 1024
AlwNI CAGNNNCTG 1 cut(s) 278
Ama87I CYCGRG 2 cut(s) 1210, 1257
AoxI GGCC 3 cut(s) 524, 717, 880
ApeKI GCWGC 2 cut(s) 23, 131
ApoI RAATTY 2 cut(s) 197, 576
Asp700I GAANNNNTTC 2 cut(s) 337, 1295
AspS9I GGNCC 1 cut(s) 1172
AsuHPI GGTGA 3 cut(s) 81, 482, 585
AsuNHI GCTAGC 1 cut(s) 503
AvaI CYCGRG 2 cut(s) 1210, 1257
AvaII GGWCC 1 cut(s) 1172
BalI TGGCCA 2 cut(s) 719, 882
BanII GRGCYC 4 cut(s) 665, 714, 909, 1264
BbrPI CACGTG 1 cut(s) 96
BbsI GAAGAC 2 cut(s) 261, 669
Bbv12I GWGCWC 3 cut(s) 714, 909, 1258
BbvI GCAGC 2 cut(s) 10, 143
BccI CCATC 5 cut(s) 102, 158, 176, 516, 1174
BceAI ACGGC 1 cut(s) 1247
BcoDI GTCTC 4 cut(s) 24, 134, 423, 1222
BfaI CTAG 9 cut(s) 27, 356, 504, 540, 657, 786, 1080, 1109, 1314
BfuAI ACCTGC 1 cut(s) 501
BglII AGATCT 1 cut(s) 1111
BisI GCNGC 2 cut(s) 24, 132
BlsI GCNGC 2 cut(s) 25, 133
Bme18I GGWCC 1 cut(s) 1172
BmeT110I CYCGRG 2 cut(s) 1210, 1257
BmgT120I GGNCC 1 cut(s) 1172
BmiI GGNNCC 4 cut(s) 632, 664, 1173, 1246
BmsI GCATC 3 cut(s) 79, 337, 1193
BmtI GCTAGC 1 cut(s) 507
BpiI GAAGAC 2 cut(s) 261, 669
BplI GAGNNNNNCTC 2 cut(s) 511, 543
BsaAI YACGTR 1 cut(s) 96
BsaHI GRCGYC 1 cut(s) 971
BsaJI CCNNGG 3 cut(s) 342, 667, 1209
Bsc4I CCNNNNNNNGG 1 cut(s) 672
Bse1I ACTGG 3 cut(s) 351, 581, 1188
Bse3DI GCAATG 2 cut(s) 440, 652
BseDI CCNNGG 3 cut(s) 342, 667, 1209
BseGI GGATG 4 cut(s) 352, 455, 479, 1184
BseLI CCNNNNNNNGG 1 cut(s) 672
BseMI GCAATG 2 cut(s) 440, 652
BseMII CTCAG 3 cut(s) 699, 852, 942
BseNI ACTGG 3 cut(s) 351, 581, 1188
BseRI GAGGAG 1 cut(s) 1198
BseXI GCAGC 2 cut(s) 10, 143
BseYI CCCAGC 2 cut(s) 290, 994
Bsh1236I CGCG 1 cut(s) 467
BshFI GGCC 3 cut(s) 526, 719, 882
BsiHKAI GWGCWC 3 cut(s) 714, 909, 1258
BsiHKCI CYCGRG 2 cut(s) 1210, 1257
BslFI GGGAC 1 cut(s) 454
BslI CCNNNNNNNGG 1 cut(s) 672
BsmAI GTCTC 4 cut(s) 24, 134, 423, 1222
BsmBI CGTCTC 2 cut(s) 423, 1222
BsmFI GGGAC 1 cut(s) 454
BsmI GAATGC 1 cut(s) 937
BsnI GGCC 3 cut(s) 526, 719, 882
BsoBI CYCGRG 2 cut(s) 1210, 1257
Bsp1286I GDGCHC 5 cut(s) 665, 714, 909, 1258, 1264
Bsp143I GATC 8 cut(s) 185, 316, 367, 788, 1029, 1091, 1111, 1138
Bsp19I CCATGG 1 cut(s) 342
BspACI CCGC 1 cut(s) 465
BspANI GGCC 3 cut(s) 526, 719, 882
BspCNI CTCAG 3 cut(s) 700, 853, 943
BspFNI CGCG 1 cut(s) 467
BspLI GGNNCC 4 cut(s) 632, 664, 1173, 1246
BspMI ACCTGC 1 cut(s) 501
BspOI GCTAGC 1 cut(s) 507
BspPI GGATC 3 cut(s) 193, 783, 1024
BsrDI GCAATG 2 cut(s) 440, 652
BsrI ACTGG 3 cut(s) 351, 581, 1188
BssECI CCNNGG 3 cut(s) 342, 667, 1209
BssMI GATC 8 cut(s) 185, 316, 367, 788, 1029, 1091, 1111, 1138
BssNI GRCGYC 1 cut(s) 971
BssT1I CCWWGG 1 cut(s) 342
Bst4CI ACNGT 1 cut(s) 406
Bst6I CTCTTC 2 cut(s) 132, 216
BstACI GRCGYC 1 cut(s) 971
BstBAI YACGTR 1 cut(s) 96
BstC8I GCNNGC 3 cut(s) 505, 699, 1000
BstDEI CTNAG 4 cut(s) 708, 861, 951, 1176
BstDSI CCRYGG 2 cut(s) 342, 667
BstF5I GGATG 4 cut(s) 352, 455, 479, 1184
BstFNI CGCG 1 cut(s) 467
BstKTI GATC 8 cut(s) 188, 319, 370, 791, 1032, 1094, 1114, 1141
BstMAI GTCTC 4 cut(s) 24, 134, 423, 1222
BstMBI GATC 8 cut(s) 185, 316, 367, 788, 1029, 1091, 1111, 1138
BstMWI GCNNNNNNNGC 5 cut(s) 556, 970, 1008, 1058, 1149
BstNSI RCATGY 5 cut(s) 213, 257, 701, 837, 933
BstUI CGCG 1 cut(s) 467
BstV1I GCAGC 2 cut(s) 10, 143
BstV2I GAAGAC 2 cut(s) 261, 669
BstX2I RGATCY 4 cut(s) 185, 788, 1029, 1111
BstYI RGATCY 4 cut(s) 185, 788, 1029, 1111
BsuRI GGCC 3 cut(s) 526, 719, 882
BtgI CCRYGG 2 cut(s) 342, 667
BtsCI GGATG 4 cut(s) 352, 455, 479, 1184
BtsI GCAGTG 2 cut(s) 927, 1159
BtsIMutI CAGTG 3 cut(s) 411, 927, 1159
BveI ACCTGC 1 cut(s) 501
Cac8I GCNNGC 3 cut(s) 505, 699, 1000
CaiI CAGNNNCTG 1 cut(s) 278
Cfr13I GGNCC 1 cut(s) 1172
CseI GACGC 2 cut(s) 456, 979
CviAII CATG 9 cut(s) 210, 254, 343, 639, 698, 715, 834, 930, 1198
DdeI CTNAG 4 cut(s) 708, 861, 951, 1176
DpnI GATC 8 cut(s) 187, 318, 369, 790, 1031, 1093, 1113, 1140
DpnII GATC 8 cut(s) 185, 316, 367, 788, 1029, 1091, 1111, 1138
EaeI YGGCCR 2 cut(s) 717, 880
Eam1104I CTCTTC 2 cut(s) 132, 216
EarI CTCTTC 2 cut(s) 132, 216
Ecl136II GAGCTC 2 cut(s) 712, 907
Eco130I CCWWGG 1 cut(s) 342
Eco24I GRGCYC 4 cut(s) 665, 714, 909, 1264
Eco32I GATATC 1 cut(s) 979
Eco47I GGWCC 1 cut(s) 1172
Eco53kI GAGCTC 2 cut(s) 712, 907
Eco57I CTGAAG 7 cut(s) 156, 210, 255, 297, 300, 636, 663
Eco72I CACGTG 1 cut(s) 96
Eco88I CYCGRG 2 cut(s) 1210, 1257
EcoICRI GAGCTC 2 cut(s) 712, 907
EcoO109I RGGNCCY 1 cut(s) 1172
EcoRI GAATTC 1 cut(s) 576
EcoRV GATATC 1 cut(s) 979
EcoT14I CCWWGG 1 cut(s) 342
EcoT22I ATGCAT 2 cut(s) 699, 703
EcoT38I GRGCYC 4 cut(s) 665, 714, 909, 1264
ErhI CCWWGG 1 cut(s) 342
Esp3I CGTCTC 2 cut(s) 423, 1222
FaeI CATG 9 cut(s) 213, 257, 346, 642, 701, 718, 837, 933, 1201
FalI AAGNNNNNCTT 6 cut(s) 619, 651, 727, 759, 1283, 1315
FaqI GGGAC 1 cut(s) 454
FatI CATG 9 cut(s) 209, 253, 342, 638, 697, 714, 833, 929, 1197
FauNDI CATATG 2 cut(s) 372, 966
Fnu4HI GCNGC 2 cut(s) 24, 132
FokI GGATG 4 cut(s) 359, 442, 466, 1171
FriOI GRGCYC 4 cut(s) 665, 714, 909, 1264
Fsp4HI GCNGC 2 cut(s) 24, 132
FspBI CTAG 9 cut(s) 27, 356, 504, 540, 657, 786, 1080, 1109, 1314
GluI GCNGC 2 cut(s) 24, 132
GsaI CCCAGC 2 cut(s) 294, 998
HaeIII GGCC 3 cut(s) 526, 719, 882
HgaI GACGC 2 cut(s) 456, 979
Hin1I GRCGYC 1 cut(s) 971
Hin1II CATG 9 cut(s) 213, 257, 346, 642, 701, 718, 837, 933, 1201
HincII GTYRAC 1 cut(s) 390
HindII GTYRAC 1 cut(s) 390
HinfI GANTC 8 cut(s) 203, 386, 395, 650, 755, 1099, 1124, 1273
HphI GGTGA 3 cut(s) 81, 482, 585
Hpy166II GTNNAC 4 cut(s) 390, 586, 898, 1157
Hpy188III TCNNGA 6 cut(s) 330, 356, 519, 773, 1115, 1212
Hpy8I GTNNAC 4 cut(s) 390, 586, 898, 1157
Hpy99I CGWCG 1 cut(s) 520
HpyAV CCTTC 5 cut(s) 275, 456, 645, 1069, 1285
HpyCH4III ACNGT 1 cut(s) 406
HpyCH4IV ACGT 1 cut(s) 95
HpyCH4V TGCA 7 cut(s) 70, 425, 697, 701, 829, 920, 1011
HpyF10VI GCNNNNNNNGC 5 cut(s) 556, 970, 1008, 1058, 1149
HpyF3I CTNAG 4 cut(s) 708, 861, 951, 1176
HpySE526I ACGT 1 cut(s) 95
Hsp92I GRCGYC 1 cut(s) 971
Hsp92II CATG 9 cut(s) 213, 257, 346, 642, 701, 718, 837, 933, 1201
Kzo9I GATC 8 cut(s) 185, 316, 367, 788, 1029, 1091, 1111, 1138
LmnI GCTCC 6 cut(s) 99, 636, 642, 668, 961, 1250
Lsp1109I GCAGC 2 cut(s) 10, 143
LweI GCATC 3 cut(s) 79, 337, 1193
MaeI CTAG 9 cut(s) 27, 356, 504, 540, 657, 786, 1080, 1109, 1314
MaeII ACGT 1 cut(s) 95
MalI GATC 8 cut(s) 187, 318, 369, 790, 1031, 1093, 1113, 1140
MboI GATC 8 cut(s) 185, 316, 367, 788, 1029, 1091, 1111, 1138
MboII GAAGA 8 cut(s) 149, 233, 261, 629, 669, 790, 861, 1291
MflI RGATCY 4 cut(s) 185, 788, 1029, 1111
MhlI GDGCHC 5 cut(s) 665, 714, 909, 1258, 1264
MlsI TGGCCA 2 cut(s) 719, 882
MluCI AATT 2 cut(s) 197, 576
MluNI TGGCCA 2 cut(s) 719, 882
MlyI GAGTC 2 cut(s) 212, 395
MmeI TCCRAC 2 cut(s) 216, 1248
MnlI CCTC 6 cut(s) 217, 507, 537, 614, 826, 1219
Mox20I TGGCCA 2 cut(s) 719, 882
Mph1103I ATGCAT 2 cut(s) 699, 703
MroXI GAANNNNTTC 2 cut(s) 337, 1295
MscI TGGCCA 2 cut(s) 719, 882
MseI TTAA 4 cut(s) 195, 554, 768, 857
MslI CAYNNNNRTG 3 cut(s) 75, 94, 341
Msp20I TGGCCA 2 cut(s) 719, 882
MspA1I CMGCKG 1 cut(s) 134
Mva1269I GAATGC 1 cut(s) 937
MvnI CGCG 1 cut(s) 467
MwoI GCNNNNNNNGC 5 cut(s) 556, 970, 1008, 1058, 1149
NcoI CCATGG 1 cut(s) 342
NdeI CATATG 2 cut(s) 372, 966
NdeII GATC 8 cut(s) 185, 316, 367, 788, 1029, 1091, 1111, 1138
NheI GCTAGC 1 cut(s) 503
NlaIII CATG 9 cut(s) 213, 257, 346, 642, 701, 718, 837, 933, 1201
NlaIV GGNNCC 4 cut(s) 632, 664, 1173, 1246
NsiI ATGCAT 2 cut(s) 699, 703
NspI RCATGY 5 cut(s) 213, 257, 701, 837, 933
OliI CACNNNNGTG 1 cut(s) 94
PaeI GCATGC 1 cut(s) 701
PaeR7I CTCGAG 1 cut(s) 1257
PaqCI CACCTGC 1 cut(s) 501
PciI ACATGT 2 cut(s) 833, 929
PcsI WCGNNNNNNNCGW 1 cut(s) 79
PctI GAATGC 1 cut(s) 937
PdmI GAANNNNTTC 2 cut(s) 337, 1295
PfeI GAWTC 6 cut(s) 395, 650, 755, 1099, 1124, 1273
PkrI GCNGC 2 cut(s) 25, 133
PleI GAGTC 2 cut(s) 211, 394
PmaCI CACGTG 1 cut(s) 96
PmlI CACGTG 1 cut(s) 96
PpsI GAGTC 2 cut(s) 211, 394
Ppu21I YACGTR 1 cut(s) 96
PpuMI RGGWCCY 1 cut(s) 1172
PscI ACATGT 2 cut(s) 833, 929
Psp124BI GAGCTC 2 cut(s) 714, 909
Psp5II RGGWCCY 1 cut(s) 1172
PspCI CACGTG 1 cut(s) 96
PspFI CCCAGC 2 cut(s) 290, 994
PspN4I GGNNCC 4 cut(s) 632, 664, 1173, 1246
PspPI GGNCC 1 cut(s) 1172
PspPPI RGGWCCY 1 cut(s) 1172
PspXI VCTCGAGB 1 cut(s) 1257
PstNI CAGNNNCTG 1 cut(s) 278
PsuI RGATCY 4 cut(s) 185, 788, 1029, 1111
PvuII CAGCTG 1 cut(s) 134
RseI CAYNNNNRTG 3 cut(s) 75, 94, 341
SacI GAGCTC 2 cut(s) 714, 909
SaqAI TTAA 4 cut(s) 195, 554, 768, 857
SatI GCNGC 2 cut(s) 24, 132
Sau3AI GATC 8 cut(s) 185, 316, 367, 788, 1029, 1091, 1111, 1138
Sau96I GGNCC 1 cut(s) 1172
SchI GAGTC 2 cut(s) 212, 395
SduI GDGCHC 5 cut(s) 665, 714, 909, 1258, 1264
SfaNI GCATC 3 cut(s) 79, 337, 1193
Sfr274I CTCGAG 1 cut(s) 1257
SinI GGWCC 1 cut(s) 1172
SlaI CTCGAG 1 cut(s) 1257
SmiMI CAYNNNNRTG 3 cut(s) 75, 94, 341
SmlI CTYRAG 1 cut(s) 1257
SmoI CTYRAG 1 cut(s) 1257
SphI GCATGC 1 cut(s) 701
Sse9I AATT 2 cut(s) 197, 576
SsiI CCGC 1 cut(s) 465
SspMI CTAG 9 cut(s) 27, 356, 504, 540, 657, 786, 1080, 1109, 1314
SstI GAGCTC 2 cut(s) 714, 909
StyI CCWWGG 1 cut(s) 342
TaaI ACNGT 1 cut(s) 406
TaiI ACGT 1 cut(s) 98
TaqI TCGA 4 cut(s) 82, 106, 518, 1258
TasI AATT 2 cut(s) 197, 576
TfiI GAWTC 6 cut(s) 395, 650, 755, 1099, 1124, 1273
Tru1I TTAA 4 cut(s) 195, 554, 768, 857
Tru9I TTAA 4 cut(s) 195, 554, 768, 857
TscAI CASTG 3 cut(s) 411, 927, 1159
TseI GCWGC 2 cut(s) 23, 131
TspDTI ATGAA 4 cut(s) 429, 444, 627, 663
TspGWI ACGGA 3 cut(s) 222, 407, 808
TspRI CASTG 3 cut(s) 411, 927, 1159
VpaK11BI GGWCC 1 cut(s) 1172
XapI RAATTY 2 cut(s) 197, 576
XbaI TCTAGA 1 cut(s) 355
XceI RCATGY 5 cut(s) 213, 257, 701, 837, 933
XhoI CTCGAG 1 cut(s) 1257
XmnI GAANNNNTTC 2 cut(s) 337, 1295
XspI CTAG 9 cut(s) 27, 356, 504, 540, 657, 786, 1080, 1109, 1314
Zsp2I ATGCAT 2 cut(s) 699, 703
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.