Regulator of Vps4 activity in the MVB pathway
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G52270 AT5G52270 |
| fragaria_vesca | FvH4_6g47281 |
| malus_domestica | MD01G1200300.v1.1 MD07G1268100.v1.1 |
| prunus_persica | Prupe.2G293800_v2.0.a1 |
| pyrus_communis | pycom07g24570 |
| rosa_chinensis | RchiOBHm_Chr1g0333651 RchiOBHm_Chr5g0053861 |
| rosa_roxburghii | Rroxscaffold_4G00317350 |
| rosa_rugosa | Rorug02G0522400 Rorug06G0275000 Rorug07G0304600 |
| rosa_samantha | Rh4AG111000 Rh6DG154600 Rh7AG307300 Rh7CG326300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 125 |
| AcsI | RAATTY | 4 cut(s) | 4, 95, 134, 248 |
| AcuI | CTGAAG | 2 cut(s) | 102, 178 |
| AfaI | GTAC | 1 cut(s) | 169 |
| AgsI | TTSAA | 1 cut(s) | 233 |
| ApoI | RAATTY | 4 cut(s) | 4, 95, 134, 248 |
| AsuC2I | CCSGG | 1 cut(s) | 271 |
| BanII | GRGCYC | 1 cut(s) | 271 |
| BccI | CCATC | 1 cut(s) | 179 |
| BcnI | CCSGG | 1 cut(s) | 271 |
| BglII | AGATCT | 1 cut(s) | 235 |
| Bme1390I | CCNGG | 1 cut(s) | 271 |
| BmiI | GGNNCC | 1 cut(s) | 268 |
| BmrFI | CCNGG | 1 cut(s) | 271 |
| BmsI | GCATC | 1 cut(s) | 146 |
| BpuEI | CTTGAG | 1 cut(s) | 224 |
| BpuMI | CCSGG | 1 cut(s) | 271 |
| BseGI | GGATG | 2 cut(s) | 49, 100 |
| BsiSI | CCGG | 1 cut(s) | 271 |
| BsmI | GAATGC | 1 cut(s) | 25 |
| Bsp1286I | GDGCHC | 1 cut(s) | 271 |
| Bsp143I | GATC | 3 cut(s) | 26, 182, 235 |
| BspACI | CCGC | 1 cut(s) | 125 |
| BspLI | GGNNCC | 1 cut(s) | 268 |
| BssMI | GATC | 3 cut(s) | 26, 182, 235 |
| Bst4CI | ACNGT | 1 cut(s) | 143 |
| BstF5I | GGATG | 2 cut(s) | 49, 100 |
| BstKTI | GATC | 3 cut(s) | 29, 185, 238 |
| BstMBI | GATC | 3 cut(s) | 26, 182, 235 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 77 |
| BstSCI | CCNGG | 1 cut(s) | 269 |
| BstX2I | RGATCY | 1 cut(s) | 235 |
| BstYI | RGATCY | 1 cut(s) | 235 |
| BtsCI | GGATG | 2 cut(s) | 49, 100 |
| Csp6I | GTAC | 1 cut(s) | 168 |
| CviAII | CATG | 1 cut(s) | 131 |
| CviJI | RGCY | 2 cut(s) | 200, 269 |
| CviKI_1 | RGCY | 2 cut(s) | 200, 269 |
| CviQI | GTAC | 1 cut(s) | 168 |
| DpnI | GATC | 3 cut(s) | 28, 184, 237 |
| DpnII | GATC | 3 cut(s) | 26, 182, 235 |
| EciI | GGCGGA | 1 cut(s) | 140 |
| Eco24I | GRGCYC | 1 cut(s) | 271 |
| Eco57I | CTGAAG | 2 cut(s) | 102, 178 |
| EcoRI | GAATTC | 1 cut(s) | 4 |
| EcoT38I | GRGCYC | 1 cut(s) | 271 |
| FaeI | CATG | 1 cut(s) | 134 |
| FaiI | YATR | 1 cut(s) | 132 |
| FatI | CATG | 1 cut(s) | 130 |
| FokI | GGATG | 2 cut(s) | 56, 87 |
| FriOI | GRGCYC | 1 cut(s) | 271 |
| HapII | CCGG | 1 cut(s) | 271 |
| Hin1II | CATG | 1 cut(s) | 134 |
| HinfI | GANTC | 1 cut(s) | 47 |
| HpaII | CCGG | 1 cut(s) | 271 |
| Hpy188I | TCNGA | 3 cut(s) | 163, 182, 197 |
| Hpy188III | TCNNGA | 3 cut(s) | 104, 230, 241 |
| Hpy99I | CGWCG | 1 cut(s) | 179 |
| HpyCH4III | ACNGT | 1 cut(s) | 143 |
| HpyCH4V | TGCA | 1 cut(s) | 23 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 77 |
| Hsp92II | CATG | 1 cut(s) | 134 |
| Kzo9I | GATC | 3 cut(s) | 26, 182, 235 |
| LmnI | GCTCC | 3 cut(s) | 127, 164, 266 |
| LpnPI | CCDG | 2 cut(s) | 105, 117 |
| LweI | GCATC | 1 cut(s) | 146 |
| MaeIII | GTNAC | 1 cut(s) | 35 |
| MalI | GATC | 3 cut(s) | 28, 184, 237 |
| MboI | GATC | 3 cut(s) | 26, 182, 235 |
| MboII | GAAGA | 3 cut(s) | 108, 184, 245 |
| MflI | RGATCY | 1 cut(s) | 235 |
| MhlI | GDGCHC | 1 cut(s) | 271 |
| MluCI | AATT | 4 cut(s) | 4, 95, 134, 248 |
| MseI | TTAA | 2 cut(s) | 152, 261 |
| MslI | CAYNNNNRTG | 2 cut(s) | 42, 154 |
| MspI | CCGG | 1 cut(s) | 271 |
| MspR9I | CCNGG | 1 cut(s) | 271 |
| Mva1269I | GAATGC | 1 cut(s) | 25 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 77 |
| NciI | CCSGG | 1 cut(s) | 271 |
| NdeII | GATC | 3 cut(s) | 26, 182, 235 |
| NlaIII | CATG | 1 cut(s) | 134 |
| NlaIV | GGNNCC | 1 cut(s) | 268 |
| NmuCI | GTSAC | 1 cut(s) | 35 |
| PctI | GAATGC | 1 cut(s) | 25 |
| PfeI | GAWTC | 1 cut(s) | 47 |
| PspN4I | GGNNCC | 1 cut(s) | 268 |
| PsuI | RGATCY | 1 cut(s) | 235 |
| RsaI | GTAC | 1 cut(s) | 169 |
| RsaNI | GTAC | 1 cut(s) | 168 |
| RseI | CAYNNNNRTG | 2 cut(s) | 42, 154 |
| SaqAI | TTAA | 2 cut(s) | 152, 261 |
| Sau3AI | GATC | 3 cut(s) | 26, 182, 235 |
| ScrFI | CCNGG | 1 cut(s) | 271 |
| SduI | GDGCHC | 1 cut(s) | 271 |
| SfaNI | GCATC | 1 cut(s) | 146 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 42, 154 |
| SmlI | CTYRAG | 1 cut(s) | 239 |
| SmoI | CTYRAG | 1 cut(s) | 239 |
| Sse9I | AATT | 4 cut(s) | 4, 95, 134, 248 |
| SsiI | CCGC | 1 cut(s) | 125 |
| StyD4I | CCNGG | 1 cut(s) | 269 |
| TaaI | ACNGT | 1 cut(s) | 143 |
| TasI | AATT | 4 cut(s) | 4, 95, 134, 248 |
| TfiI | GAWTC | 1 cut(s) | 47 |
| Tru1I | TTAA | 2 cut(s) | 152, 261 |
| Tru9I | TTAA | 2 cut(s) | 152, 261 |
| TseFI | GTSAC | 1 cut(s) | 35 |
| Tsp45I | GTSAC | 1 cut(s) | 35 |
| TspDTI | ATGAA | 3 cut(s) | 17, 89, 147 |
| XapI | RAATTY | 4 cut(s) | 4, 95, 134, 248 |