Rh6DG517900

Enhancer of polycomb-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0010036
Physical Location & Seq
Reverse (-)
66900915 .. 66908213
7299 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG517900.1

Sequence Viewer

Length: 4149 bp
ATGGAAAATAGAATAGAGGTTTCACATGGCACTGAAATTCCCAGGAAATCGAGATCTTTGGATCTTAAGAGTTTGTACAAGTCCAGGAGTAGAAAAGAGGCTGAAAATCAGAGCCTGAAGAGAAAAGGGAGTGAGGACGACGACGGTGGGGACAAGAAGAAGAGGAGTAGGAAAGAGGTGTCTCTCAGTAGTCTCAAGAATGTTAATACTAGTAGTAGCAAGAAGAGTATAGATAAAGTTTTTCATAGAGGGTTGGATTCTGGTTCACATGATCCGGACGCATTCAAATCGGGGTCAAGTCAAAAATTGGATAGCAGTAGTGGGTTAAATGGCGTTTCAAAGCTTAGTTTGGATAATAGTGGCATTCAAATCCCGAGGCGTAAGAGGGGATTCGTGGGGCGAAAAAAATGTGAGGGTGCTCAGCTGTTGAAGCTGTCTGATGAGTCTGCTGGTAGAGCAACTAGTGTTGATCAGAATCATCAGATAGCTAAGTTAAGTGGTGATGATTTGGGTACTCAAGCTGAGGCCTGGAAGGCCATAAGAAACAAAGGTTTGGATGAATGCAAAGAAAATATAAATAGCGAGTTGAATGCAACTTCACATGCAAAGAAAGAAAATGTTCTTGAGAGACAGTCAGTTGCAAGCAATGGTAATTCATCTTTGAAAAAGTCCCGGAGGAATCGTCGGAAAAGGAAGGACTTGTCACCTGATAGTAAAACTGATGCAAAGGAAGCTGAGCCTTTAGTCAATAGTTCTACTAAAGCATGCCAGACTTCACAAGAAGACGAGGAGGAGAATCTTGAAGAGAATGCAGCGAGGATGCTTTCATCGAGGTTTGATCCAAGCTGTACTGGGTTTTCATTAAACACCAAGGCTTCTGCGATGCAATCTTCAAACGGGTTGTCTAATCAGTCATCTCCTGGTCAGGATTTTGATAGTCACATGTCGAAGTCATTTTCTGGATCAGAATCTCAATCTGTTGATAATGCTGGTAGAGTGCTGAGGCCCAGGGCCAGGAAGCAGCACAAAGAAAAGAAAGGTACGAGGAAGAGGCGCCACTTCTATGAAATCTTCTTTGGGGACTTGGATGCTTGTTGGGTATTGAACCGTAGGATCAAGGTCTTCTGGCCTTTGGACCAAAGTTGGTATTATGGCCTTGTGAATGCTTATGACAAGGAGAAAAAACTTCACCATATTAGATACGATGACCGTGAAGAAGAATGGGTTGATCTTCAACATGAGAGGTTCAAGCTCTTGCTACTTCCTACTGAAGTTCCTGGTAAGGCAAAGCAGAAAAAATCATTCATGCAAATTACAAGTTCTGAAGAGAGAGAAGGAAACTTGAAACCCAGAAAAGAGAAGAAAAAGAGAGACTCGATGTCGGAGGACGATAGCTGCATAGGCAGCTGTATGGATTCTGAACCTATTATTTCATGGTTGTCGCGATCTACCCGTCGGATCAAGTCTCCTTCTCATGCTGTGAAGAAGCAAAAAACAACTGGTCCATCTCCAAAGTCCGTGCCAACTTTGTCTGACAGTACTGGCACTTTACATGGGTGTTTGAGTGATGTTTCCTCTAGAAGGGATACAAATAAATTATCTTGTAATTCCGGCAGATCATCTGATCCTGTGAGGGAAGAGAAGCCTGCTCCAGAAGGCAACTCCGAAGATAGCAAAATGCCTATTGTTTATTATCGGAAGCGATTGCGCAAGACTGGCTCTGTACTGTCTCAAATATACAAGGATGAGCATGCTTCCATGCATGGACATCATTGTTGTACTTCTGTTACTCCTGTTGAGGAGGTTTGGGACTTGGAAGAGCCAGATGATTTTGTTGTTATATTGGATCGCAGTTGGCCATTGTGGTATAGTGATGATGCAGGGTTGCTAAAGTTAACTCTTCCTTGGATAGAATCAGGAAAAGTCAAATTTAAATGCCTTCCACTGCATTCACTAATGAATGATTCTCTTGGAGTAGAGTTGTTACGGTTCTTTTATGCTGCAATGCTGCTTCGGCATGGTGTAGTGGTGACCACATGGCCAAAGGTTCATTTGGAGATGCTCTTTGTTGATAATGTAGTTGGACTGAGGTTTCTTTTGTTTGAAGGTTGCTTGAAGCAGGCGGTGGCCTTTGTTTCTCTTATCCTGACATTATTTCATCACCCTAATGAACAGGGGAAGCTTACTGATTTCCAGTTACCAGCAACTTCAATCAGGTTTAAATTCTCCTGTGTTCAGCATCTTGGAAAGCAACTTGTGTCTGCTTTCTACAACTTCTGTCAAGTTAAAAATTCAACATGGATGTACCTAGACAATAAACTCAGGAGGCATTGTTTACTCGCCAAAAAACTGCCTCTGTCTGAATGCACCTATGATAATATCCAGGCACTTCAAAATGGAATAAATCAGTCACCTTCTATGTCTCTTTGCGGGCAACCCTCTGTCAAGGGTACACGGAAGAGGTCCAGGCAGGGCATTAACTTCATGGGCAGTTCTCGGGAAGTTAGTTTTGTAAATATCAGCCATTCTGCTACTCATTCTGATGAGCTTCACAGAAAGCTTCCCCCACTTGCTCTATCTTTTACAGCTGCACCTACTTTCTTCATTAATTTGCATCTTAAGTTGCTTATGGAACACAGTGTTGCTAATATCTGCTTTCAAGACCATGATTCAGAAATTACTCCCGAGAACAATTTGAAGGCTCCAGAAAATGTGGCTACCTCTGGTGGGTCCTGTACTAAAGTGGTAACAGAAACATCTCTTTCTATTTGCAGTCAGCGCGGTCGGTTAAAGTCATCTCAGCTTTACCAAAATTGTGTTGTTAATGTTGCTGGAGCCTCTTCTAGGACTTTCGCTGGCAGAGATAAATCCGAAACTAGTTCCCGTTCTATTGTGAATGGGCTTACTGTTGAAATTCCATCTTTTGACCATTTTGAGAAGCCTGTGGAGAGGGAGTTACAAAGTGCTCAACAGCCTACAGATTTTCAACAGCCTACAGTTTTTTCATTGAATATGAATGGTAGCATTATCCGCAGTCCCAGCCCCACTGCTCCCAGAAGTACAGGGCAGCGAAATAGAAATAATATGTCATCATTTGGAAACCTCGCACATCGTTGGTCAGATGGAAAGGCTGACATTTTCCATAATGGTTTTGGTAATGGACCGAAGAAGCCCCGAACTCAAGTCTCATACACATTGCCTTGTGGAGGTTTTGATGTCAGCTCTAAGCAAAGAAATGTTCACAAAGGGCTTCCTAATAAGCGAATTAGAAGGGCCAGCGAGAAGAGGTCATCAGACATTTCCAGAGGTTCCGAAAGGAACTTGGAGCTCTTATCCTGTGAGGCAAATGTGTTAATTTCTGCAAGTGACAGAGGGTGGAGAGAATGTGGGGCACGTGTAGTATTAGAACTCTTTGATAATAGTGAGTGGAAGCTTGCTGTAAAACTTTCAGGGACTACGAAGTATTCATACAAAGCACATCAATTTTTGCAGCCTGGGTCAACAAACCGCTATACTCATGTTATGATGTGGAAAGGAGGAAAGGATTGGATCTTGGAGTTTCCAGATAGGAGCCAGTGGGCCCTTTTCAAGGAGATGCATGAAGAGTGTTACAATCGGAACCTTCGGTCTGCGTCAGTTAAAAACATACCTATTCCTGGTGTTCGCTTAGTAGAAGATATTGATGATAATGGAACAGAAATAGCATTTCTTCGCAGTTCTACCAAGTACTTTCAGCAGATGAAAACCGATGTTGAGATGGCTTTAGATCCATCTCGTCTCTTGTATGACATGGATAGTGATGATGAGCGATGGATTTTGAAGTTTCAAAATTCTTCAGAAGTTGAAAAGAGTAGCTCAATGGAGATTGGCGAGGAGATGTTTGAGAAGACAATGGACATGTTTGAGAAGGCTGCATATGTTCGGCAATGTGATCAGTTCACATCTGAAGAAATAGAAGAGTTCATGACTGGTATTGGGCCCATGGATTTGATTAAAACCATTTATGAGCATTGGCGTCAGAAACGGCTGAGAAAGGGAATGCCTTTAATCCGACATCTCCAGGTACCTTCAGTTCTTTTTTATCACATGCGATATATTTACATTTTAGGTGTAGGATTACAACCTTTGCGCTATTATAGTATACGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EPL1

Protein Analysis

1382

Amino Acids

156.65

Weight (kDa)

9.26

Isoelectric Point (pI)

59.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EPL1 PF10513 1208 - 1303 1.3e-08 Enhancer of polycomb-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1709
Acc65I GGTACC 1 cut(s) 4063
AccB1I GGYRCC 2 cut(s) 1053, 4063
AccI GTMKAC 1 cut(s) 4141
AccII CGCG 2 cut(s) 1444, 2781
AccIII TCCGGA 1 cut(s) 274
AciI CCGC 5 cut(s) 2123, 2430, 2781, 3031, 3508
AcoI YGGCCR 2 cut(s) 1856, 2039
AcsI RAATTY 6 cut(s) 36, 1928, 2222, 2290, 2913, 3829
AcuI CTGAAG 6 cut(s) 137, 1290, 1344, 3819, 3966, 4053
AcvI CACGTG 1 cut(s) 3395
AcyI GRCGYC 2 cut(s) 1054, 4015
AfiI CCNNNNNNNGG 7 cut(s) 1014, 1581, 2727, 2844, 3206, 3589, 3656
AflII CTTAAG 2 cut(s) 65, 2618
AflIII ACRYGT 3 cut(s) 942, 3394, 3897
AhdI GACNNNNNGTC 1 cut(s) 1378
AhlI ACTAGT 3 cut(s) 209, 461, 2876
AjuI GAANNNNNNNTTGG 2 cut(s) 1059, 1091
Alw21I GWGCWC 3 cut(s) 421, 2968, 3330
Alw26I GTCTC 9 cut(s) 186, 197, 622, 1365, 1470, 1734, 2427, 3190, 3782
AlwNI CAGNNNCTG 1 cut(s) 115
Ama87I CYCGRG 3 cut(s) 373, 2496, 2684
Aor13HI TCCGGA 1 cut(s) 274
ApaI GGGCCC 2 cut(s) 3583, 3981
ApoI RAATTY 6 cut(s) 36, 1928, 2222, 2290, 2913, 3829
ArsI GACNNNNNNTTYG 2 cut(s) 887, 919
AseI ATTAAT 1 cut(s) 2607
Asp700I GAANNNNTTC 1 cut(s) 618
Asp718I GGTACC 1 cut(s) 4063
AspLEI GCGC 4 cut(s) 1056, 1710, 2781, 4131
AsuC2I CCSGG 1 cut(s) 673
AsuHPI GGTGA 6 cut(s) 512, 696, 1181, 2041, 2153, 2403
AvaI CYCGRG 3 cut(s) 373, 2496, 2684
AvaII GGWCC 5 cut(s) 1135, 1502, 2463, 2730, 3161
BaeGI GKGCMC 3 cut(s) 3394, 3583, 3981
BalI TGGCCA 2 cut(s) 1858, 2041
BanI GGYRCC 2 cut(s) 1053, 4063
BanII GRGCYC 3 cut(s) 3330, 3583, 3981
BarI GAAGNNNNNNTAC 2 cut(s) 3452, 3484
BbrPI CACGTG 1 cut(s) 3395
BbsI GAAGAC 3 cut(s) 789, 1114, 3893
Bbv12I GWGCWC 3 cut(s) 421, 2968, 3330
BbvCI CCTCAGC 2 cut(s) 522, 1001
BccI CCATC 6 cut(s) 1513, 2926, 3116, 3751, 3778, 3804
BceAI ACGGC 1 cut(s) 4040
BcgI CGANNNNNNTGC 4 cut(s) 270, 304, 572, 606
BciVI GTATCC 1 cut(s) 1579
BclI TGATCA 2 cut(s) 469, 3931
BcnI CCSGG 1 cut(s) 673
BcoDI GTCTC 9 cut(s) 186, 197, 622, 1365, 1470, 1734, 2427, 3190, 3782
BcuI ACTAGT 3 cut(s) 209, 461, 2876
BfaI CTAG 6 cut(s) 210, 462, 1578, 2309, 2844, 2877
BfmI CTRYAG 2 cut(s) 2976, 2994
BfoI RGCGCY 1 cut(s) 1057
BfrI CTTAAG 2 cut(s) 65, 2618
BfuI GTATCC 1 cut(s) 1579
BglI GCCNNNNNGGC 1 cut(s) 533
BglII AGATCT 1 cut(s) 53
BlpI GCTNAGC 2 cut(s) 420, 735
BmcAI AGTACT 2 cut(s) 1540, 3728
Bme18I GGWCC 5 cut(s) 1135, 1502, 2463, 2730, 3161
BmeRI GACNNNNNGTC 1 cut(s) 1378
BmeT110I CYCGRG 3 cut(s) 373, 2496, 2684
BmrI ACTGGG 1 cut(s) 861
BmsI GCATC 9 cut(s) 712, 810, 873, 1078, 1867, 2049, 2248, 2623, 3585
BmuI ACTGGG 1 cut(s) 861
BpiI GAAGAC 3 cut(s) 789, 1114, 3893
BpmI CTGGAG 4 cut(s) 1635, 2688, 2853, 4043
Bpu10I CCTNAGC 2 cut(s) 522, 1001
Bpu1102I GCTNAGC 2 cut(s) 420, 735
BpuEI CTTGAG 4 cut(s) 179, 501, 644, 3165
BpuMI CCSGG 1 cut(s) 673
BsaAI YACGTR 1 cut(s) 3395
BsaBI GATNNNNATC 2 cut(s) 474, 967
BsaHI GRCGYC 2 cut(s) 1054, 4015
BsaJI CCNNGG 8 cut(s) 41, 374, 870, 1007, 1008, 1904, 3494, 3981
BsaWI WCCGGW 1 cut(s) 274
BsaXI ACNNNNNCTCC 8 cut(s) 667, 697, 2317, 2347, 2939, 2969, 3370, 3400
Bsc4I CCNNNNNNNGG 7 cut(s) 1014, 1581, 2727, 2844, 3206, 3589, 3656
Bse1I ACTGG 7 cut(s) 856, 1504, 1546, 1720, 2194, 3574, 3973
Bse3DI GCAATG 4 cut(s) 652, 2010, 3194, 3932
Bse8I GATNNNNATC 2 cut(s) 474, 967
BseAI TCCGGA 1 cut(s) 274
BseDI CCNNGG 8 cut(s) 41, 374, 870, 1007, 1008, 1904, 3494, 3981
BseGI GGATG 5 cut(s) 562, 825, 1093, 1750, 2307
BseJI GATNNNNATC 2 cut(s) 474, 967
BseLI CCNNNNNNNGG 7 cut(s) 1014, 1581, 2727, 2844, 3206, 3589, 3656
BseMI GCAATG 4 cut(s) 652, 2010, 3194, 3932
BseMII CTCAG 9 cut(s) 199, 434, 513, 726, 992, 2078, 2335, 2813, 4019
BseNI ACTGG 7 cut(s) 856, 1504, 1546, 1720, 2194, 3574, 3973
BseRI GAGGAG 5 cut(s) 178, 803, 806, 1814, 3887
BseSI GKGCMC 3 cut(s) 3394, 3583, 3981
BseYI CCCAGC 1 cut(s) 3038
BsgI GTGCAG 1 cut(s) 2574
Bsh1236I CGCG 2 cut(s) 1444, 2781
Bsh1285I CGRYCG 1 cut(s) 2785
BshNI GGYRCC 2 cut(s) 1053, 4063
BsiEI CGRYCG 1 cut(s) 2785
BsiHKAI GWGCWC 3 cut(s) 421, 2968, 3330
BsiHKCI CYCGRG 3 cut(s) 373, 2496, 2684
BsiSI CCGG 3 cut(s) 275, 673, 1611
BslFI GGGAC 6 cut(s) 164, 655, 1094, 1823, 3021, 3466
BslI CCNNNNNNNGG 7 cut(s) 1014, 1581, 2727, 2844, 3206, 3589, 3656
BsmAI GTCTC 9 cut(s) 186, 197, 622, 1365, 1470, 1734, 2427, 3190, 3782
BsmBI CGTCTC 1 cut(s) 3782
BsmFI GGGAC 6 cut(s) 164, 655, 1094, 1823, 3021, 3466
BsmI GAATGC 9 cut(s) 281, 363, 566, 595, 814, 1168, 1948, 2369, 4044
BsoBI CYCGRG 3 cut(s) 373, 2496, 2684
Bsp120I GGGCCC 2 cut(s) 3579, 3977
Bsp1286I GDGCHC 6 cut(s) 421, 2968, 3330, 3394, 3583, 3981
Bsp13I TCCGGA 1 cut(s) 274
Bsp1407I TGTACA 1 cut(s) 75
Bsp1720I GCTNAGC 2 cut(s) 420, 735
Bsp19I CCATGG 1 cut(s) 3981
Bsp68I TCGCGA 1 cut(s) 1444
BspACI CCGC 5 cut(s) 2123, 2430, 2781, 3031, 3508
BspCNI CTCAG 9 cut(s) 198, 433, 514, 727, 993, 2079, 2334, 2812, 4020
BspEI TCCGGA 1 cut(s) 274
BspFNI CGCG 2 cut(s) 1444, 2781
BspHI TCATGA 1 cut(s) 3963
BspQI GCTCTTC 1 cut(s) 1812
BspT107I GGYRCC 2 cut(s) 1053, 4063
BspTI CTTAAG 2 cut(s) 65, 2618
BsrDI GCAATG 4 cut(s) 652, 2010, 3194, 3932
BsrGI TGTACA 1 cut(s) 75
BsrI ACTGG 7 cut(s) 856, 1504, 1546, 1720, 2194, 3574, 3973
BssECI CCNNGG 8 cut(s) 41, 374, 870, 1007, 1008, 1904, 3494, 3981
BssNAI GTATAC 1 cut(s) 4142
BssNI GRCGYC 2 cut(s) 1054, 4015
BssT1I CCWWGG 3 cut(s) 870, 1904, 3981
Bst1107I GTATAC 1 cut(s) 4142
BstACI GRCGYC 2 cut(s) 1054, 4015
BstAFI CTTAAG 2 cut(s) 65, 2618
BstAUI TGTACA 1 cut(s) 75
BstBAI YACGTR 1 cut(s) 3395
BstC8I GCNNGC 9 cut(s) 643, 766, 1647, 1752, 2121, 2432, 2857, 3277, 3435
BstDSI CCRYGG 1 cut(s) 3981
BstEII GGTNACC 1 cut(s) 2029
BstENI CCTNNNNNAGG 4 cut(s) 1579, 2842, 3204, 3587
BstF5I GGATG 5 cut(s) 562, 825, 1093, 1750, 2307
BstFNI CGCG 2 cut(s) 1444, 2781
BstH2I RGCGCY 1 cut(s) 1057
BstHHI GCGC 4 cut(s) 1056, 1710, 2781, 4131
BstMAI GTCTC 9 cut(s) 186, 197, 622, 1365, 1470, 1734, 2427, 3190, 3782
BstMCI CGRYCG 1 cut(s) 2785
BstNSI RCATGY 6 cut(s) 605, 768, 946, 1754, 3901, 4090
BstPI GGTNACC 1 cut(s) 2029
BstSFI CTRYAG 2 cut(s) 2976, 2994
BstSLI GKGCMC 3 cut(s) 3394, 3583, 3981
BstUI CGCG 2 cut(s) 1444, 2781
BstV2I GAAGAC 3 cut(s) 789, 1114, 3893
BstX2I RGATCY 4 cut(s) 53, 61, 3549, 3766
BstYI RGATCY 4 cut(s) 53, 61, 3549, 3766
BstZ17I GTATAC 1 cut(s) 4142
BsuI GTATCC 1 cut(s) 1579
BtgI CCRYGG 1 cut(s) 3981
BtgZI GCGATG 2 cut(s) 896, 3823
BtsCI GGATG 5 cut(s) 562, 825, 1093, 1750, 2307
BtsI GCAGTG 2 cut(s) 1943, 3045
BtsIMutI CAGTG 5 cut(s) 30, 1943, 2644, 3045, 3581
BtuMI TCGCGA 1 cut(s) 1444
Cac8I GCNNGC 9 cut(s) 643, 766, 1647, 1752, 2121, 2432, 2857, 3277, 3435
CaiI CAGNNNCTG 1 cut(s) 115
CciI TCATGA 1 cut(s) 3963
CfoI GCGC 4 cut(s) 1056, 1710, 2781, 4131
CseI GACGC 3 cut(s) 287, 3621, 4004
DinI GGCGCC 1 cut(s) 1055
DraI TTTAAA 2 cut(s) 1933, 2221
DriI GACNNNNNGTC 1 cut(s) 1378
EaeI YGGCCR 2 cut(s) 1856, 2039
Eam1105I GACNNNNNGTC 1 cut(s) 1378
Ecl136II GAGCTC 1 cut(s) 3328
Eco130I CCWWGG 3 cut(s) 870, 1904, 3981
Eco147I AGGCCT 1 cut(s) 527
Eco24I GRGCYC 3 cut(s) 3330, 3583, 3981
Eco47I GGWCC 5 cut(s) 1135, 1502, 2463, 2730, 3161
Eco53kI GAGCTC 1 cut(s) 3328
Eco57I CTGAAG 6 cut(s) 137, 1290, 1344, 3819, 3966, 4053
Eco72I CACGTG 1 cut(s) 3395
Eco88I CYCGRG 3 cut(s) 373, 2496, 2684
Eco91I GGTNACC 1 cut(s) 2029
EcoICRI GAGCTC 1 cut(s) 3328
EcoNI CCTNNNNNAGG 4 cut(s) 1579, 2842, 3204, 3587
EcoO109I RGGNCCY 2 cut(s) 2730, 3580
EcoO65I GGTNACC 1 cut(s) 2029
EcoT14I CCWWGG 3 cut(s) 870, 1904, 3981
EcoT22I ATGCAT 2 cut(s) 1764, 3600
EcoT38I GRGCYC 3 cut(s) 3330, 3583, 3981
EgeI GGCGCC 1 cut(s) 1055
EheI GGCGCC 1 cut(s) 1055
ErhI CCWWGG 3 cut(s) 870, 1904, 3981
Esp3I CGTCTC 1 cut(s) 3782
FaqI GGGAC 6 cut(s) 164, 655, 1094, 1823, 3021, 3466
FauI CCCGC 1 cut(s) 2423
FauNDI CATATG 1 cut(s) 3916
FbaI TGATCA 2 cut(s) 469, 3931
FblI GTMKAC 1 cut(s) 4141
FokI GGATG 5 cut(s) 569, 832, 1100, 1757, 2314
FriOI GRGCYC 3 cut(s) 3330, 3583, 3981
FspBI CTAG 6 cut(s) 210, 462, 1578, 2309, 2844, 2877
FspI TGCGCA 1 cut(s) 1709
GlaI GCGC 4 cut(s) 1055, 1709, 2780, 4130
GsaI CCCAGC 1 cut(s) 3042
GsuI CTGGAG 4 cut(s) 1635, 2688, 2853, 4043
HaeII RGCGCY 1 cut(s) 1057
HapII CCGG 3 cut(s) 275, 673, 1611
HgaI GACGC 3 cut(s) 287, 3621, 4004
HhaI GCGC 4 cut(s) 1056, 1710, 2781, 4131
Hin1I GRCGYC 2 cut(s) 1054, 4015
Hin6I GCGC 4 cut(s) 1054, 1708, 2779, 4129
HinP1I GCGC 4 cut(s) 1054, 1708, 2779, 4129
HincII GTYRAC 2 cut(s) 1896, 3501
HindII GTYRAC 2 cut(s) 1896, 3501
HindIII AAGCTT 4 cut(s) 341, 2180, 2558, 3431
HpaI GTTAAC 1 cut(s) 1896
HpaII CCGG 3 cut(s) 275, 673, 1611
HphI GGTGA 6 cut(s) 512, 696, 1181, 2041, 2153, 2403
Hpy166II GTNNAC 8 cut(s) 266, 1896, 2336, 2453, 3241, 3501, 3939, 4142
Hpy8I GTNNAC 8 cut(s) 266, 1896, 2336, 2453, 3241, 3501, 3939, 4142
Hpy99I CGWCG 4 cut(s) 143, 146, 687, 1458
HpyCH4IV ACGT 1 cut(s) 3394
HpySE526I ACGT 1 cut(s) 3394
Hsp92I GRCGYC 2 cut(s) 1054, 4015
HspAI GCGC 4 cut(s) 1054, 1708, 2779, 4129
KasI GGCGCC 1 cut(s) 1053
Kpn2I TCCGGA 1 cut(s) 274
KpnI GGTACC 1 cut(s) 4067
Ksp22I TGATCA 2 cut(s) 469, 3931
KspAI GTTAAC 1 cut(s) 1896
LguI GCTCTTC 1 cut(s) 1812
LmnI GCTCC 6 cut(s) 1654, 2707, 2834, 3055, 3325, 3570
LweI GCATC 9 cut(s) 712, 810, 873, 1078, 1867, 2049, 2248, 2623, 3585
MaeI CTAG 6 cut(s) 210, 462, 1578, 2309, 2844, 2877
MaeII ACGT 1 cut(s) 3394
MflI RGATCY 4 cut(s) 53, 61, 3549, 3766
MhlI GDGCHC 6 cut(s) 421, 2968, 3330, 3394, 3583, 3981
MlsI TGGCCA 2 cut(s) 1858, 2041
MluNI TGGCCA 2 cut(s) 1858, 2041
Mly113I GGCGCC 1 cut(s) 1054
MlyI GAGTC 2 cut(s) 452, 1367
MmeI TCCRAC 6 cut(s) 234, 665, 1362, 1436, 2062, 4075
Mox20I TGGCCA 2 cut(s) 1858, 2041
Mph1103I ATGCAT 2 cut(s) 1764, 3600
MroI TCCGGA 1 cut(s) 274
MroXI GAANNNNTTC 1 cut(s) 618
MscI TGGCCA 2 cut(s) 1858, 2041
MslI CAYNNNNRTG 3 cut(s) 1062, 2166, 2541
Msp20I TGGCCA 2 cut(s) 1858, 2041
MspA1I CMGCKG 3 cut(s) 424, 1407, 2588
MspCI CTTAAG 2 cut(s) 65, 2618
MspI CCGG 3 cut(s) 275, 673, 1611
Mva1269I GAATGC 9 cut(s) 281, 363, 566, 595, 814, 1168, 1948, 2369, 4044
MvnI CGCG 2 cut(s) 1444, 2781
NarI GGCGCC 1 cut(s) 1054
NciI CCSGG 1 cut(s) 673
NcoI CCATGG 1 cut(s) 3981
NdeI CATATG 1 cut(s) 3916
NmuCI GTSAC 5 cut(s) 702, 938, 2029, 2409, 3365
NruI TCGCGA 1 cut(s) 1444
NsbI TGCGCA 1 cut(s) 1709
NsiI ATGCAT 2 cut(s) 1764, 3600
NspI RCATGY 6 cut(s) 605, 768, 946, 1754, 3901, 4090
PaeI GCATGC 2 cut(s) 768, 1754
PagI TCATGA 1 cut(s) 3963
PasI CCCWGGG 1 cut(s) 1008
PceI AGGCCT 1 cut(s) 527
PciI ACATGT 2 cut(s) 942, 3897
PciSI GCTCTTC 1 cut(s) 1812
PctI GAATGC 9 cut(s) 281, 363, 566, 595, 814, 1168, 1948, 2369, 4044
PdmI GAANNNNTTC 1 cut(s) 618
PfoI TCCNGGA 2 cut(s) 83, 671
PleI GAGTC 2 cut(s) 451, 1367
PluTI GGCGCC 1 cut(s) 1057
PmaCI CACGTG 1 cut(s) 3395
PmlI CACGTG 1 cut(s) 3395
PpsI GAGTC 2 cut(s) 451, 1367
Ppu21I YACGTR 1 cut(s) 3395
PpuMI RGGWCCY 1 cut(s) 2730
PscI ACATGT 2 cut(s) 942, 3897
PshBI ATTAAT 1 cut(s) 2607
Psp124BI GAGCTC 1 cut(s) 3330
Psp5II RGGWCCY 1 cut(s) 2730
PspCI CACGTG 1 cut(s) 3395
PspEI GGTNACC 1 cut(s) 2029
PspFI CCCAGC 1 cut(s) 3038
PspOMI GGGCCC 2 cut(s) 3579, 3977
PspPPI RGGWCCY 1 cut(s) 2730
PsrI GAACNNNNNNTAC 2 cut(s) 4056, 4088
PstNI CAGNNNCTG 1 cut(s) 115
PsuI RGATCY 4 cut(s) 53, 61, 3549, 3766
PvuII CAGCTG 3 cut(s) 424, 1407, 2588
RruI TCGCGA 1 cut(s) 1444
RseI CAYNNNNRTG 3 cut(s) 1062, 2166, 2541
SacI GAGCTC 1 cut(s) 3330
SapI GCTCTTC 1 cut(s) 1812
ScaI AGTACT 2 cut(s) 1540, 3728
SchI GAGTC 2 cut(s) 452, 1367
SduI GDGCHC 6 cut(s) 421, 2968, 3330, 3394, 3583, 3981
SfaNI GCATC 9 cut(s) 712, 810, 873, 1078, 1867, 2049, 2248, 2623, 3585
SfcI CTRYAG 2 cut(s) 2976, 2994
SfiI GGCCNNNNNGGCC 1 cut(s) 533
SfoI GGCGCC 1 cut(s) 1055
SinI GGWCC 5 cut(s) 1135, 1502, 2463, 2730, 3161
SmiI ATTTAAAT 1 cut(s) 1933
SmiMI CAYNNNNRTG 3 cut(s) 1062, 2166, 2541
SmlI CTYRAG 6 cut(s) 65, 194, 516, 623, 2618, 3180
SmoI CTYRAG 6 cut(s) 65, 194, 516, 623, 2618, 3180
SpeI ACTAGT 3 cut(s) 209, 461, 2876
SphI GCATGC 2 cut(s) 768, 1754
SseBI AGGCCT 1 cut(s) 527
SsiI CCGC 5 cut(s) 2123, 2430, 2781, 3031, 3508
SspDI GGCGCC 1 cut(s) 1053
SspMI CTAG 6 cut(s) 210, 462, 1578, 2309, 2844, 2877
SstI GAGCTC 1 cut(s) 3330
StuI AGGCCT 1 cut(s) 527
StyI CCWWGG 3 cut(s) 870, 1904, 3981
SwaI ATTTAAAT 1 cut(s) 1933
TaiI ACGT 1 cut(s) 3397
TaqI TCGA 4 cut(s) 50, 830, 947, 1376
TaqII GACCGA 2 cut(s) 3178, 3615
TatI WGTACW 8 cut(s) 75, 848, 1538, 1723, 1778, 2735, 3059, 3726
TscAI CASTG 5 cut(s) 37, 1950, 2644, 3052, 3581
TseFI GTSAC 5 cut(s) 702, 938, 2029, 2409, 3365
Tsp45I GTSAC 5 cut(s) 702, 938, 2029, 2409, 3365
TspGWI ACGGA 2 cut(s) 1507, 2470
TspRI CASTG 5 cut(s) 37, 1950, 2644, 3052, 3581
Vha464I CTTAAG 2 cut(s) 65, 2618
VpaK11BI GGWCC 5 cut(s) 1135, 1502, 2463, 2730, 3161
VspI ATTAAT 1 cut(s) 2607
XagI CCTNNNNNAGG 4 cut(s) 1579, 2842, 3204, 3587
XapI RAATTY 6 cut(s) 36, 1928, 2222, 2290, 2913, 3829
XbaI TCTAGA 1 cut(s) 1577
XceI RCATGY 6 cut(s) 605, 768, 946, 1754, 3901, 4090
XcmI CCANNNNNNNNNTGG 1 cut(s) 3149
XmiI GTMKAC 1 cut(s) 4141
XmnI GAANNNNTTC 1 cut(s) 618
XspI CTAG 6 cut(s) 210, 462, 1578, 2309, 2844, 2877
ZrmI AGTACT 2 cut(s) 1540, 3728
Zsp2I ATGCAT 2 cut(s) 1764, 3600
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.