Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0008483

Physical Location & Seq

Genomic Coordinates Forward (+)

25142498 .. 25149637

Gene Structure 7140 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG251800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2085 bp

ATGGCGGCATTTGAAGCTGCGCTGTCTCTCCCCTCACTCTACTCTCCTTGTTCCTCTAAACCCCTCTCCTTTCCTAAACCCTTAAACCTTCGTATTCCCAATATCGTCCCTCCCATTTCTCACAACTTCCTCTTCTCTCCTCCCCCACTTATCCCCACAAGAAACCTCTTTTTCGAGCTTCTGTGCTCCGCGGTGCAGGAGATTACAGCCGGGGAAGAACAGTTAGGACAAGACTCAGTGGAAGAGAAAACCCAAAACCAGCAAAACCTCAAGAGAAAGCTGTACGTGGTGAACTTGCCTTGGTCCCTCACTGTGGTCGATATCAAGAACCTGTTTGGAGAATGTGGGGATGTTAAAGACGTTGAGATTATAAAGCAACAAGATGGGAGGAACAGAGGCTTTGCATTTGTCACAATGGCTTCTGGGGAAGAAGCTCAGGCTGTCATTGATAAATTTGACTCTCAGGAGCTATCAGGTAGAACTATCAAGGTAGAGTTTGCAAAGCAATTTAAGAAACCATCTCCACGTCCTTCGACCCCTCAAGTTCAAGAGACTCGCTATAAACTTTATGTTTCCAATTTGGCATGGAAAGCAAGATCAAGCCATCTCAGAGACTTTGTCTCTTTAAATTTTAAAACTCCAGTTTCAGCCCGTGTCGTCTTTGATGGGCCTTCAGGGAAGTCTGGTGGATATGGATTTGTTTCTTTTGCTACAAAGGAGGAGGCAGAGGAGGCAATTTCTGCTTTGAATGGGCACGAATTGATGGGGCGGCCAGTGAATCTGAAATTTAGTGAGAAAAATGTAGGTGAATCTACAAGCCAAGAGGAAAACGTTGACTCCAACCAAAATGAAAAGGAGGAGGAAGAGAAATTGGAGATTGTTTCCTGTCTTGCTAAAAATCTTGACATAGATGCTACTGGGTTGTGTAAGATATACAGATTTATGGATTTTCTTAGTCATGGGAACTTCTTTTATAGCATTACGGTGTCTACTAGAAGATGGAGAAATTTTATATATCTGAGTAAAAATGTCCATGTTACAAAAAGGCTAAGAAGGATCTGGAAGTGGCTTAGGGAAGAAATAAAGGATGATATTGCGAATGTGAGCAAGGACAATTCATCTTCATCTCCAAATTTCTCTCCTCTTGTTATTGCAATCATTGGCATTTTGGTGAGTGCCTTTCTTCTTGTGAGCTACTACACCATAATGTCCAAGTACTGCGGTAACGAGGACCGAAGAAGATCAACAAGCAGAGAAGACTATAGCCAGAATGAGGAGCTGGATGGTACCCAAAATCCTTCTATCCATGAACCGTGGTATGTTGTGACTGTCGGCTTGGATGAAGGTGTGATAAAGTCATTGGGAGTTTATAAGTACAAGAATGGAGATGATTTAGTTGAAGGGACGGATTGCGCTGTCTGTCTGAGTGAGTTTGAAGAAGATGAGAGCCTGAGGCTGTTGCCCAAGTGCAACCATGCTTTTCATCTTCCATGTATTGATACATGGCTCAAGTCTCACTCGAATTGCCCTCTATGTCGTGCTAGCGTGGTTTCGACGAATGCTCCAACACATCAATTGCCTCCTGTTGTGACTGAAACTCCTCCAAGTAGTAGCAATGAAGATGAAAATGTAATCATGGGGGCACAAGTTTCAGAGACGGGTCATCCTCGAAATGTGGAGATATTGCATGGAGATGTCATTCCAAAGACACCAGTACGCGCTTTTAGTGATTTGGGTAATTCAGAAGAGAGGGATACCATAATAGAGATTGAAAGTGATGATACATTTGATCAAACAGTCAGAAGGTCAGTCTCCATGGACTATTTATGTCAGAATAATCGCATTTTAGTTGCCGATATTCTCCGCACGAATGATGAAGAAGATGAAGAACATGTGCAAGGGTGCTCACAGTTAGAGTCAGATGAGATTGCTGGTCCTTCAAAACAATCAGTAGCTGGAGGAGTTGGAACTCATAGCCGCAGAAAAGAGACTCTGAGGCATGTTGCAATGAAGAGATCATTTTCGGGTGGGAGATTGTTTCTAACTAGGCCTGCAAGAGCCAGGCATATAGTAATTCCACTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009628 GO:0009987 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0032446 GO:0036211 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0050896 GO:0051603 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0080167 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

694

Amino Acids

77.89

Weight (kDa)

5.66

Isoelectric Point (pI)

52.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	94 - 163	4.7e-17	RNA recognition motif
RRM_1	PF00076	189 - 259	7.9e-14	RNA recognition motif
zf-RING_2	PF13639	470 - 513	3.5e-14	Ring finger domain
zf-RING_11	PF17123	470 - 499	2.5e-10	RING-like zinc finger
zf-C3HC4_2	PF13923	471 - 512	2.4e-07	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4	PF00097	471 - 512	7.9e-07	Zinc finger, C3HC4 type (RING finger)
zf-rbx1	PF12678	474 - 513	4.7e-09	RING-H2 zinc finger domain
zf-ANAPC11	PF12861	478 - 516	8.6e-06	Anaphase-promoting complex subunit 11 RING-H2 finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008483)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35410
fragaria_vesca	FvH4_5g22330 FvH4_5g22330
malus_domestica	MD06G1035700.v1.1
prunus_persica	Prupe.5G034000_v2.0.a1 Prupe.5G034000_v2.0.a1
pyrus_communis	pycom06g02960 pycom16g24260
rosa_chinensis	RchiOBHm_Chr7g0210041
rosa_laevigata	RLG00000003069
rosa_multiflora	Rmu_sc0004509.1_g000027
rosa_roxburghii	Rroxscaffold_3G00248660 Rroxscaffold_5G00364890
rosa_rugosa	Rorug07G0118000
rosa_samantha	Rh3DG312200 Rh4DG124600 Rh5CG433700 Rh6AG038800 Rh7AG251800 Rh7BG246400 Rh7CG268600 Rh7DG258700
rosa_wichuraiana	Rw7G021380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	371, 1371
Acc65I	GGTACC	1 cut(s)	1286
AccB1I	GGYRCC	1 cut(s)	1286
AccI	GTMKAC	1 cut(s)	989
AccII	CGCG	2 cut(s)	191, 1719
AciI	CCGC	7 cut(s)	5, 189, 191, 769, 1221, 1864, 1978
AclI	AACGTT	1 cut(s)	831
AclWI	GGATC	1 cut(s)	1064
AcoI	YGGCCR	1 cut(s)	770
AcsI	RAATTY	5 cut(s)	452, 628, 785, 1006, 1132
AcuI	CTGAAG	1 cut(s)	657
AfaI	GTAC	5 cut(s)	284, 1217, 1288, 1376, 1716
AfiI	CCNNNNNNNGG	2 cut(s)	313, 1273
AflIII	ACRYGT	1 cut(s)	1891
AgsI	TTSAA	7 cut(s)	14, 548, 748, 1400, 1436, 1772, 1941
AjiI	CACGTC	1 cut(s)	527
AjnI	CCWGG	1 cut(s)	2060
AluBI	AGCT	8 cut(s)	17, 178, 280, 434, 469, 1194, 1279, 1955
AluI	AGCT	8 cut(s)	17, 178, 280, 434, 469, 1194, 1279, 1955
Alw21I	GWGCWC	2 cut(s)	188, 1907
Alw26I	GTCTC	8 cut(s)	30, 545, 606, 625, 1518, 1649, 1816, 1982
AlwI	GGATC	1 cut(s)	1064
AlwNI	CAGNNNCTG	1 cut(s)	1955
AoxI	GGCC	3 cut(s)	668, 770, 2048
ApeKI	GCWGC	1 cut(s)	17
ApoI	RAATTY	5 cut(s)	452, 628, 785, 1006, 1132
Asp718I	GGTACC	1 cut(s)	1286
AspLEI	GCGC	3 cut(s)	22, 1415, 1721
AspS9I	GGNCC	4 cut(s)	303, 668, 1231, 1934
AsuC2I	CCSGG	1 cut(s)	211
AsuHPI	GGTGA	3 cut(s)	301, 818, 1183
AsuNHI	GCTAGC	1 cut(s)	1541
AvaII	GGWCC	3 cut(s)	303, 1231, 1934
AxyI	CCTNAGG	1 cut(s)	1451
BaeGI	GKGCMC	2 cut(s)	756, 1645
BanI	GGYRCC	1 cut(s)	1286
BbsI	GAAGAC	1 cut(s)	1263
Bbv12I	GWGCWC	2 cut(s)	188, 1907
BbvI	GCAGC	1 cut(s)	4
BccI	CCATC	7 cut(s)	377, 526, 612, 659, 757, 993, 1277
BciT130I	CCWGG	1 cut(s)	2062
BciVI	GTATCC	1 cut(s)	1747
BclI	TGATCA	1 cut(s)	1789
BcnI	CCSGG	1 cut(s)	211
BcoDI	GTCTC	8 cut(s)	30, 545, 606, 625, 1518, 1649, 1816, 1982
BfaI	CTAG	4 cut(s)	993, 1542, 2046, 2083
BfmI	CTRYAG	1 cut(s)	1261
BfuI	GTATCC	1 cut(s)	1747
BisI	GCNGC	4 cut(s)	6, 18, 770, 1978
BlsI	GCNGC	4 cut(s)	7, 19, 771, 1979
BmcAI	AGTACT	1 cut(s)	1217
Bme1390I	CCNGG	2 cut(s)	211, 2062
Bme18I	GGWCC	3 cut(s)	303, 1231, 1934
BmgBI	CACGTC	1 cut(s)	527
BmgT120I	GGNCC	4 cut(s)	303, 668, 1231, 1934
BmiI	GGNNCC	2 cut(s)	305, 1288
BmrFI	CCNGG	2 cut(s)	211, 2062
BmrI	ACTGGG	1 cut(s)	927
BmsI	GCATC	1 cut(s)	901
BmtI	GCTAGC	1 cut(s)	1545
BmuI	ACTGGG	1 cut(s)	927
BpiI	GAAGAC	1 cut(s)	1263
BpmI	CTGGAG	2 cut(s)	624, 1977
Bpu10I	CCTNAGC	2 cut(s)	435, 1070
BpuEI	CTTGAG	3 cut(s)	254, 525, 1493
BpuMI	CCSGG	1 cut(s)	211
BsaAI	YACGTR	1 cut(s)	286
BsaJI	CCNNGG	5 cut(s)	189, 210, 299, 1313, 1815
BsaXI	ACNNNNNCTCC	6 cut(s)	821, 851, 1546, 1576, 1582, 1612
Bsc4I	CCNNNNNNNGG	2 cut(s)	313, 1273
Bse1I	ACTGG	4 cut(s)	641, 773, 922, 1712
Bse21I	CCTNAGG	1 cut(s)	1451
Bse3DI	GCAATG	2 cut(s)	1621, 2013
BseBI	CCWGG	1 cut(s)	2062
BseDI	CCNNGG	5 cut(s)	189, 210, 299, 1313, 1815
BseGI	GGATG	5 cut(s)	355, 1093, 1288, 1345, 1663
BseLI	CCNNNNNNNGG	2 cut(s)	313, 1273
BseMI	GCAATG	2 cut(s)	1621, 2013
BseMII	CTCAG	8 cut(s)	249, 449, 476, 622, 1010, 1415, 1442, 1985
BseNI	ACTGG	4 cut(s)	641, 773, 922, 1712
BseRI	GAGGAG	8 cut(s)	129, 734, 743, 872, 1131, 1289, 1590, 1974
BseSI	GKGCMC	2 cut(s)	756, 1645
BseXI	GCAGC	1 cut(s)	4
BsgI	GTGCAG	1 cut(s)	215
Bsh1236I	CGCG	2 cut(s)	191, 1719
BshFI	GGCC	3 cut(s)	670, 772, 2050
BshNI	GGYRCC	1 cut(s)	1286
BsiHKAI	GWGCWC	2 cut(s)	188, 1907
BsiSI	CCGG	1 cut(s)	210
BslFI	GGGAC	3 cut(s)	92, 289, 1417
BslI	CCNNNNNNNGG	2 cut(s)	313, 1273
BsmAI	GTCTC	8 cut(s)	30, 545, 606, 625, 1518, 1649, 1816, 1982
BsmBI	CGTCTC	1 cut(s)	1649
BsmFI	GGGAC	3 cut(s)	92, 289, 1417
BsmI	GAATGC	1 cut(s)	1564
BsnI	GGCC	3 cut(s)	670, 772, 2050
Bsp1286I	GDGCHC	4 cut(s)	188, 756, 1645, 1907
Bsp143I	GATC	5 cut(s)	596, 1056, 1241, 1789, 2015
Bsp19I	CCATGG	1 cut(s)	1815
BspACI	CCGC	7 cut(s)	5, 189, 191, 769, 1221, 1864, 1978
BspANI	GGCC	3 cut(s)	670, 772, 2050
BspCNI	CTCAG	8 cut(s)	248, 448, 475, 621, 1011, 1416, 1443, 1986
BspFNI	CGCG	2 cut(s)	191, 1719
BspLI	GGNNCC	2 cut(s)	305, 1288
BspOI	GCTAGC	1 cut(s)	1545
BspPI	GGATC	1 cut(s)	1064
BspT107I	GGYRCC	1 cut(s)	1286
BsrDI	GCAATG	2 cut(s)	1621, 2013
BsrI	ACTGG	4 cut(s)	641, 773, 922, 1712
BssECI	CCNNGG	5 cut(s)	189, 210, 299, 1313, 1815
BssMI	GATC	5 cut(s)	596, 1056, 1241, 1789, 2015
BssT1I	CCWWGG	2 cut(s)	299, 1815
Bst2UI	CCWGG	1 cut(s)	2062
Bst4CI	ACNGT	7 cut(s)	222, 313, 985, 1314, 1330, 1798, 1911
Bst6I	CTCTTC	5 cut(s)	137, 237, 858, 1740, 2006
BstAPI	GCANNNNNTGC	1 cut(s)	740
BstBAI	YACGTR	1 cut(s)	286
BstC8I	GCNNGC	2 cut(s)	1543, 2052
BstDSI	CCRYGG	3 cut(s)	189, 1313, 1815
BstF5I	GGATG	5 cut(s)	355, 1093, 1288, 1345, 1663
BstFNI	CGCG	2 cut(s)	191, 1719
BstHHI	GCGC	3 cut(s)	22, 1415, 1721
BstKTI	GATC	5 cut(s)	599, 1059, 1244, 1792, 2018
BstMAI	GTCTC	8 cut(s)	30, 545, 606, 625, 1518, 1649, 1816, 1982
BstMBI	GATC	5 cut(s)	596, 1056, 1241, 1789, 2015
BstMWI	GCNNNNNNNGC	4 cut(s)	14, 590, 731, 740
BstNI	CCWGG	1 cut(s)	2062
BstNSI	RCATGY	2 cut(s)	1895, 2003
BstSCI	CCNGG	2 cut(s)	209, 2060
BstSFI	CTRYAG	1 cut(s)	1261
BstSLI	GKGCMC	2 cut(s)	756, 1645
BstUI	CGCG	2 cut(s)	191, 1719
BstV1I	GCAGC	1 cut(s)	4
BstV2I	GAAGAC	1 cut(s)	1263
BstX2I	RGATCY	1 cut(s)	1056
BstYI	RGATCY	1 cut(s)	1056
Bsu36I	CCTNAGG	1 cut(s)	1451
BsuI	GTATCC	1 cut(s)	1747
BsuRI	GGCC	3 cut(s)	670, 772, 2050
BtgI	CCRYGG	3 cut(s)	189, 1313, 1815
BtrI	CACGTC	1 cut(s)	527
BtsCI	GGATG	5 cut(s)	355, 1093, 1288, 1345, 1663
BtsIMutI	CAGTG	3 cut(s)	243, 309, 780
Cac8I	GCNNGC	2 cut(s)	1543, 2052
CaiI	CAGNNNCTG	1 cut(s)	1955
CfoI	GCGC	3 cut(s)	22, 1415, 1721
Cfr13I	GGNCC	4 cut(s)	303, 668, 1231, 1934
Cfr42I	CCGCGG	1 cut(s)	192
Csp6I	GTAC	5 cut(s)	283, 1216, 1287, 1375, 1715
CviQI	GTAC	5 cut(s)	283, 1216, 1287, 1375, 1715
DpnI	GATC	5 cut(s)	598, 1058, 1243, 1791, 2017
DpnII	GATC	5 cut(s)	596, 1056, 1241, 1789, 2015
DraI	TTTAAA	2 cut(s)	627, 634
EaeI	YGGCCR	1 cut(s)	770
Eam1104I	CTCTTC	5 cut(s)	137, 237, 858, 1740, 2006
EarI	CTCTTC	5 cut(s)	137, 237, 858, 1740, 2006
Eco130I	CCWWGG	2 cut(s)	299, 1815
Eco147I	AGGCCT	1 cut(s)	2050
Eco32I	GATATC	1 cut(s)	322
Eco47I	GGWCC	3 cut(s)	303, 1231, 1934
Eco57I	CTGAAG	1 cut(s)	657
Eco81I	CCTNAGG	1 cut(s)	1451
EcoRII	CCWGG	1 cut(s)	2060
EcoRV	GATATC	1 cut(s)	322
EcoT14I	CCWWGG	2 cut(s)	299, 1815
ErhI	CCWWGG	2 cut(s)	299, 1815
Esp3I	CGTCTC	1 cut(s)	1649
FaqI	GGGAC	3 cut(s)	92, 289, 1417
FbaI	TGATCA	1 cut(s)	1789
FblI	GTMKAC	1 cut(s)	989
Fnu4HI	GCNGC	4 cut(s)	6, 18, 770, 1978
FokI	GGATG	5 cut(s)	362, 1100, 1295, 1352, 1650
Fsp4HI	GCNGC	4 cut(s)	6, 18, 770, 1978
FspBI	CTAG	4 cut(s)	993, 1542, 2046, 2083
GlaI	GCGC	3 cut(s)	21, 1414, 1720
GluI	GCNGC	4 cut(s)	6, 18, 770, 1978
GsuI	CTGGAG	2 cut(s)	624, 1977
HaeIII	GGCC	3 cut(s)	670, 772, 2050
HapII	CCGG	1 cut(s)	210
HhaI	GCGC	3 cut(s)	22, 1415, 1721
Hin6I	GCGC	3 cut(s)	20, 1413, 1719
HinP1I	GCGC	3 cut(s)	20, 1413, 1719
HincII	GTYRAC	1 cut(s)	835
HindII	GTYRAC	1 cut(s)	835
HinfI	GANTC	8 cut(s)	233, 458, 553, 778, 809, 836, 1916, 1990
HpaII	CCGG	1 cut(s)	210
HphI	GGTGA	3 cut(s)	301, 818, 1183
Hpy166II	GTNNAC	3 cut(s)	292, 835, 990
Hpy188III	TCNNGA	6 cut(s)	271, 325, 464, 548, 902, 1060
Hpy8I	GTNNAC	3 cut(s)	292, 835, 990
Hpy99I	CGWCG	1 cut(s)	1558
HpyAV	CCTTC	9 cut(s)	98, 540, 681, 1047, 1308, 1337, 1394, 1797, 1947
HpyCH4III	ACNGT	7 cut(s)	222, 313, 985, 1314, 1330, 1798, 1911
HpyCH4IV	ACGT	4 cut(s)	285, 360, 526, 831
HpyCH4V	TGCA	9 cut(s)	196, 404, 500, 1154, 1470, 1687, 1897, 2006, 2054
HpyF10VI	GCNNNNNNNGC	4 cut(s)	14, 590, 731, 740
HpySE526I	ACGT	4 cut(s)	285, 360, 526, 831
HspAI	GCGC	3 cut(s)	20, 1413, 1719
KpnI	GGTACC	1 cut(s)	1290
Ksp22I	TGATCA	1 cut(s)	1789
KspI	CCGCGG	1 cut(s)	192
Kzo9I	GATC	5 cut(s)	596, 1056, 1241, 1789, 2015
LmnI	GCTCC	4 cut(s)	191, 466, 1276, 1567
Lsp1109I	GCAGC	1 cut(s)	4
LweI	GCATC	1 cut(s)	901
MaeI	CTAG	4 cut(s)	993, 1542, 2046, 2083
MaeII	ACGT	4 cut(s)	285, 360, 526, 831
MaeIII	GTNAC	5 cut(s)	409, 1036, 1223, 1324, 1588
MalI	GATC	5 cut(s)	598, 1058, 1243, 1791, 2017
MboI	GATC	5 cut(s)	596, 1056, 1241, 1789, 2015
MfeI	CAATTG	1 cut(s)	1574
MflI	RGATCY	1 cut(s)	1056
MhlI	GDGCHC	4 cut(s)	188, 756, 1645, 1907
MlyI	GAGTC	6 cut(s)	227, 452, 547, 830, 1925, 1984
MmeI	TCCRAC	3 cut(s)	864, 1589, 1945
MseI	TTAA	5 cut(s)	83, 354, 510, 626, 633
MslI	CAYNNNNRTG	4 cut(s)	983, 1169, 1205, 1692
MspA1I	CMGCKG	1 cut(s)	191
MspI	CCGG	1 cut(s)	210
MspR9I	CCNGG	2 cut(s)	211, 2062
MunI	CAATTG	1 cut(s)	1574
Mva1269I	GAATGC	1 cut(s)	1564
MvaI	CCWGG	1 cut(s)	2062
MvnI	CGCG	2 cut(s)	191, 1719
MwoI	GCNNNNNNNGC	4 cut(s)	14, 590, 731, 740
NciI	CCSGG	1 cut(s)	211
NcoI	CCATGG	1 cut(s)	1815
NdeII	GATC	5 cut(s)	596, 1056, 1241, 1789, 2015
NheI	GCTAGC	1 cut(s)	1541
NlaIV	GGNNCC	2 cut(s)	305, 1288
NmuCI	GTSAC	3 cut(s)	409, 1324, 1588
NspI	RCATGY	2 cut(s)	1895, 2003
PceI	AGGCCT	1 cut(s)	2050
PciI	ACATGT	1 cut(s)	1891
PctI	GAATGC	1 cut(s)	1564
PfeI	GAWTC	2 cut(s)	778, 809
PflFI	GACNNNGTC	1 cut(s)	617
PkrI	GCNGC	4 cut(s)	7, 19, 771, 1979
PleI	GAGTC	6 cut(s)	227, 452, 547, 830, 1924, 1984
PpsI	GAGTC	6 cut(s)	227, 452, 547, 830, 1924, 1984
Ppu21I	YACGTR	1 cut(s)	286
PscI	ACATGT	1 cut(s)	1891
PsiI	TTATAA	2 cut(s)	371, 1371
Psp1406I	AACGTT	1 cut(s)	831
Psp6I	CCWGG	1 cut(s)	2060
PspGI	CCWGG	1 cut(s)	2060
PspN4I	GGNNCC	2 cut(s)	305, 1288
PspPI	GGNCC	4 cut(s)	303, 668, 1231, 1934
PstNI	CAGNNNCTG	1 cut(s)	1955
PsuI	RGATCY	1 cut(s)	1056
PsyI	GACNNNGTC	1 cut(s)	617
RsaI	GTAC	5 cut(s)	284, 1217, 1288, 1376, 1716
RsaNI	GTAC	5 cut(s)	283, 1216, 1287, 1375, 1715
RseI	CAYNNNNRTG	4 cut(s)	983, 1169, 1205, 1692
SacII	CCGCGG	1 cut(s)	192
SaqAI	TTAA	5 cut(s)	83, 354, 510, 626, 633
SatI	GCNGC	4 cut(s)	6, 18, 770, 1978
Sau3AI	GATC	5 cut(s)	596, 1056, 1241, 1789, 2015
Sau96I	GGNCC	4 cut(s)	303, 668, 1231, 1934
ScaI	AGTACT	1 cut(s)	1217
SchI	GAGTC	6 cut(s)	227, 452, 547, 830, 1925, 1984
ScrFI	CCNGG	2 cut(s)	211, 2062
SduI	GDGCHC	4 cut(s)	188, 756, 1645, 1907
SfaNI	GCATC	1 cut(s)	901
SfcI	CTRYAG	1 cut(s)	1261
Sfr303I	CCGCGG	1 cut(s)	192
SgrBI	CCGCGG	1 cut(s)	192
SinI	GGWCC	3 cut(s)	303, 1231, 1934
SmiMI	CAYNNNNRTG	4 cut(s)	983, 1169, 1205, 1692
SmlI	CTYRAG	3 cut(s)	269, 540, 1508
SmoI	CTYRAG	3 cut(s)	269, 540, 1508
SseBI	AGGCCT	1 cut(s)	2050
SsiI	CCGC	7 cut(s)	5, 189, 191, 769, 1221, 1864, 1978
SspMI	CTAG	4 cut(s)	993, 1542, 2046, 2083
StuI	AGGCCT	1 cut(s)	2050
StyD4I	CCNGG	2 cut(s)	209, 2060
StyI	CCWWGG	2 cut(s)	299, 1815
TaaI	ACNGT	7 cut(s)	222, 313, 985, 1314, 1330, 1798, 1911
TaiI	ACGT	4 cut(s)	288, 363, 529, 834
TaqI	TCGA	6 cut(s)	174, 318, 533, 1520, 1553, 1669
TaqII	GACCGA	1 cut(s)	1248
TatI	WGTACW	2 cut(s)	1215, 1374
TauI	GCSGC	3 cut(s)	8, 772, 1980
TfiI	GAWTC	2 cut(s)	778, 809
Tru1I	TTAA	5 cut(s)	83, 354, 510, 626, 633
Tru9I	TTAA	5 cut(s)	83, 354, 510, 626, 633
TscAI	CASTG	3 cut(s)	243, 316, 780
TseFI	GTSAC	3 cut(s)	409, 1324, 1588
TseI	GCWGC	1 cut(s)	17
Tsp45I	GTSAC	3 cut(s)	409, 1324, 1588
TspGWI	ACGGA	1 cut(s)	1421
TspRI	CASTG	3 cut(s)	243, 316, 780
Tth111I	GACNNNGTC	1 cut(s)	617
VpaK11BI	GGWCC	3 cut(s)	303, 1231, 1934
XapI	RAATTY	5 cut(s)	452, 628, 785, 1006, 1132
XceI	RCATGY	2 cut(s)	1895, 2003
XmiI	GTMKAC	1 cut(s)	989
XspI	CTAG	4 cut(s)	993, 1542, 2046, 2083
ZrmI	AGTACT	1 cut(s)	1217

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.