Rh7AG391700

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
51259262 .. 51261327
2066 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG391700.1

Sequence Viewer

Length: 630 bp
ATGGAAAGTGCCTTTGGACTATATGAAGAGATGCTTCAGAGTATCTCTCCAAATATAGTGAGTTACAGCATCCTCATTGATGGTCTTTGCAAAAGAGGACTGATGGAGAAAGCAGCCCTTGCATTTCATTCTGCTATAGACAGGGGTCTGGTGCCGGATGTAGTAGCATATGGGATTCTGATTCATGGTTACTGCAGGGTTGGAAGAACGGCAGAAGCCATGGTATTGTACGGTCGGGTCTTTACTGCTCGAGCTTATTCAGCAGATGCAAGTACAAGGTGTGCAGGCATCTGGGAAGTGATTGAAAGAAGAAAGGAGCAGTTGTCAATATTAGTTCTAATGCAGCTCACCTCCCTTCTTTGCTTCTACAATCAAAGCACTCCACTTTTCGTGGCGGGGATGACAAAACATGTGAAGGCACCTTCCTGGTTGATATATTTGGATGATGATGACGAAGCCATCCGAAATAGGGCAACATCTTGTTATTGCAGATTGGTTGCAAATTCCTTTTCTGGCGTACAATATGCTCCTGGTAGGTCAAATTGGGGAAAGCTATGGGATTCTCAGGTTAAAGGATGGCAGATATTCAGGAGATATCACTTAAATTGGAGAGGAAATTTCTGCGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001067 GO:0001558 GO:0002682 GO:0002683 GO:0002697 GO:0002698 GO:0002831 GO:0002832 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004672 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005844 GO:0006139 GO:0006259 GO:0006281 GO:0006351 GO:0006355 GO:0006464 GO:0006468 GO:0006629 GO:0006644 GO:0006650 GO:0006661 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006974 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009059 GO:0009303 GO:0009605 GO:0009606 GO:0009607 GO:0009615 GO:0009628 GO:0009629 GO:0009630 GO:0009719 GO:0009725 GO:0009733 GO:0009743 GO:0009744 GO:0009745 GO:0009756 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009894 GO:0009895 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010115 GO:0010116 GO:0010154 GO:0010182 GO:0010243 GO:0010467 GO:0010468 GO:0010506 GO:0010507 GO:0010556 GO:0010557 GO:0010565 GO:0010604 GO:0010628 GO:0010646 GO:0010647 GO:0010928 GO:0010929 GO:0014070 GO:0016070 GO:0016072 GO:0016301 GO:0016303 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018130 GO:0019216 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0019637 GO:0019747 GO:0022414 GO:0023051 GO:0023052 GO:0023056 GO:0030258 GO:0030307 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0031329 GO:0031330 GO:0031347 GO:0031348 GO:0032101 GO:0032102 GO:0032501 GO:0032502 GO:0032774 GO:0032991 GO:0033554 GO:0034285 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0035004 GO:0036092 GO:0036211 GO:0040008 GO:0040019 GO:0042221 GO:0042493 GO:0042802 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043455 GO:0043621 GO:0043900 GO:0043901 GO:0044087 GO:0044089 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044464 GO:0045017 GO:0045472 GO:0045828 GO:0045834 GO:0045893 GO:0045927 GO:0045935 GO:0045995 GO:0046474 GO:0046483 GO:0046486 GO:0046488 GO:0046677 GO:0046834 GO:0046854 GO:0046889 GO:0046890 GO:0048316 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0048608 GO:0048731 GO:0048856 GO:0050687 GO:0050688 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051128 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0051716 GO:0052742 GO:0060255 GO:0061458 GO:0062012 GO:0062013 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071322 GO:0071324 GO:0071329 GO:0071704 GO:0080090 GO:0080134 GO:0090069 GO:0090070 GO:0090304 GO:0090407 GO:0097159 GO:0097305 GO:0097327 GO:0097659 GO:0098781 GO:0140096 GO:1900457 GO:1900459 GO:1901355 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1901654 GO:1901698 GO:1901700 GO:1901701 GO:1902659 GO:1902661 GO:1902680 GO:1902930 GO:1902932 GO:1903506 GO:1903508 GO:1990904 GO:2000026 GO:2000112 GO:2000232 GO:2000234 GO:2001141

Protein Analysis

209

Amino Acids

23.63

Weight (kDa)

8.84

Isoelectric Point (pI)

39.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 1 - 31 1e-07 PPR repeat family
PPR_1 PF12854 15 - 38 1.4e-08 PPR repeat
PPR_2 PF13041 17 - 66 2.8e-13 PPR repeat family
PPR_1 PF12854 48 - 76 4.6e-10 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 151, 418
AciI CCGC 2 cut(s) 395, 624
AcsI RAATTY 2 cut(s) 502, 616
AcuI CTGAAG 1 cut(s) 20
AfaI GTAC 3 cut(s) 230, 274, 519
AfiI CCNNNNNNNGG 1 cut(s) 469
AflIII ACRYGT 1 cut(s) 409
AgsI TTSAA 1 cut(s) 305
AjnI CCWGG 2 cut(s) 425, 529
AjuI GAANNNNNNNTTGG 1 cut(s) 29
AluBI AGCT 3 cut(s) 254, 346, 553
AluI AGCT 3 cut(s) 254, 346, 553
Ama87I CYCGRG 1 cut(s) 249
ApeKI GCWGC 2 cut(s) 113, 343
ApoI RAATTY 2 cut(s) 502, 616
AsuHPI GGTGA 1 cut(s) 340
AvaI CYCGRG 1 cut(s) 249
BanI GGYRCC 2 cut(s) 151, 418
BbvI GCAGC 2 cut(s) 125, 355
BccI CCATC 4 cut(s) 74, 97, 467, 570
BceAI ACGGC 1 cut(s) 225
BciT130I CCWGG 2 cut(s) 427, 531
BfmI CTRYAG 2 cut(s) 135, 193
BisI GCNGC 2 cut(s) 114, 344
BlsI GCNGC 2 cut(s) 115, 345
Bme1390I CCNGG 2 cut(s) 427, 531
BmeT110I CYCGRG 1 cut(s) 249
BmiI GGNNCC 2 cut(s) 153, 420
BmrFI CCNGG 2 cut(s) 427, 531
BmsI GCATC 4 cut(s) 21, 78, 256, 297
BoxI GACNNNNGTC 1 cut(s) 144
BplI GAGNNNNNCTC 2 cut(s) 31, 63
BsaJI CCNNGG 1 cut(s) 219
BsaXI ACNNNNNCTCC 2 cut(s) 308, 338
Bsc4I CCNNNNNNNGG 1 cut(s) 469
BseBI CCWGG 2 cut(s) 427, 531
BseDI CCNNGG 1 cut(s) 219
BseGI GGATG 6 cut(s) 69, 163, 405, 448, 459, 581
BseLI CCNNNNNNNGG 1 cut(s) 469
BseMII CTCAG 1 cut(s) 578
BseXI GCAGC 2 cut(s) 125, 355
BsgI GTGCAG 1 cut(s) 303
Bsh1285I CGRYCG 1 cut(s) 235
BshNI GGYRCC 2 cut(s) 151, 418
BsiEI CGRYCG 1 cut(s) 235
BsiHKCI CYCGRG 1 cut(s) 249
BsiSI CCGG 1 cut(s) 155
BslI CCNNNNNNNGG 1 cut(s) 469
BsoBI CYCGRG 1 cut(s) 249
Bsp19I CCATGG 1 cut(s) 219
BspACI CCGC 2 cut(s) 395, 624
BspCNI CTCAG 1 cut(s) 577
BspLI GGNNCC 2 cut(s) 153, 420
BspMAI CTGCAG 1 cut(s) 197
BspT107I GGYRCC 2 cut(s) 151, 418
BssECI CCNNGG 1 cut(s) 219
BssT1I CCWWGG 1 cut(s) 219
Bst2UI CCWGG 2 cut(s) 427, 531
Bst4CI ACNGT 1 cut(s) 233
Bst6I CTCTTC 1 cut(s) 21
BstAPI GCANNNNNTGC 1 cut(s) 119
BstC8I GCNNGC 1 cut(s) 286
BstDEI CTNAG 1 cut(s) 564
BstDSI CCRYGG 1 cut(s) 219
BstF5I GGATG 6 cut(s) 69, 163, 405, 448, 459, 581
BstMCI CGRYCG 1 cut(s) 235
BstMWI GCNNNNNNNGC 2 cut(s) 119, 260
BstNI CCWGG 2 cut(s) 427, 531
BstNSI RCATGY 1 cut(s) 413
BstPAI GACNNNNGTC 1 cut(s) 144
BstSCI CCNGG 2 cut(s) 425, 529
BstSFI CTRYAG 2 cut(s) 135, 193
BstV1I GCAGC 2 cut(s) 125, 355
BtgI CCRYGG 1 cut(s) 219
BtsCI GGATG 6 cut(s) 69, 163, 405, 448, 459, 581
Cac8I GCNNGC 1 cut(s) 286
Csp6I GTAC 3 cut(s) 229, 273, 518
CviAII CATG 3 cut(s) 185, 220, 410
CviJI RGCY 6 cut(s) 116, 218, 254, 346, 458, 553
CviKI_1 RGCY 6 cut(s) 116, 218, 254, 346, 458, 553
CviQI GTAC 3 cut(s) 229, 273, 518
DdeI CTNAG 1 cut(s) 564
Eam1104I CTCTTC 1 cut(s) 21
EarI CTCTTC 1 cut(s) 21
Eco130I CCWWGG 1 cut(s) 219
Eco32I GATATC 1 cut(s) 596
Eco57I CTGAAG 1 cut(s) 20
Eco88I CYCGRG 1 cut(s) 249
EcoRII CCWGG 2 cut(s) 425, 529
EcoRV GATATC 1 cut(s) 596
EcoT14I CCWWGG 1 cut(s) 219
ErhI CCWWGG 1 cut(s) 219
FaeI CATG 3 cut(s) 188, 223, 413
FalI AAGNNNNNCTT 4 cut(s) 18, 50, 102, 134
FatI CATG 3 cut(s) 184, 219, 409
FauI CCCGC 1 cut(s) 388
FauNDI CATATG 1 cut(s) 169
Fnu4HI GCNGC 2 cut(s) 114, 344
FokI GGATG 6 cut(s) 56, 170, 412, 446, 455, 588
Fsp4HI GCNGC 2 cut(s) 114, 344
GluI GCNGC 2 cut(s) 114, 344
HapII CCGG 1 cut(s) 155
Hin1II CATG 3 cut(s) 188, 223, 413
HinfI GANTC 3 cut(s) 175, 181, 560
HpaII CCGG 1 cut(s) 155
HphI GGTGA 1 cut(s) 340
Hpy188I TCNGA 3 cut(s) 39, 180, 464
Hpy188III TCNNGA 1 cut(s) 589
HpyAV CCTTC 3 cut(s) 365, 409, 432
HpyCH4III ACNGT 1 cut(s) 233
HpyCH4V TGCA 8 cut(s) 90, 122, 195, 269, 284, 343, 489, 500
HpyF10VI GCNNNNNNNGC 2 cut(s) 119, 260
HpyF3I CTNAG 1 cut(s) 564
Hsp92II CATG 3 cut(s) 188, 223, 413
LmnI GCTCC 2 cut(s) 316, 532
Lsp1109I GCAGC 2 cut(s) 125, 355
LweI GCATC 4 cut(s) 21, 78, 256, 297
MaeIII GTNAC 2 cut(s) 62, 188
MboII GAAGA 3 cut(s) 38, 216, 321
MluCI AATT 4 cut(s) 502, 541, 604, 616
MmeI TCCRAC 1 cut(s) 181
MnlI CCTC 4 cut(s) 83, 89, 361, 605
MseI TTAA 2 cut(s) 570, 602
MspI CCGG 1 cut(s) 155
MspR9I CCNGG 2 cut(s) 427, 531
MvaI CCWGG 2 cut(s) 427, 531
MwoI GCNNNNNNNGC 2 cut(s) 119, 260
NcoI CCATGG 1 cut(s) 219
NdeI CATATG 1 cut(s) 169
NlaIII CATG 3 cut(s) 188, 223, 413
NlaIV GGNNCC 2 cut(s) 153, 420
NspI RCATGY 1 cut(s) 413
PaeR7I CTCGAG 1 cut(s) 249
PciI ACATGT 1 cut(s) 409
PfeI GAWTC 3 cut(s) 175, 181, 560
PkrI GCNGC 2 cut(s) 115, 345
PscI ACATGT 1 cut(s) 409
PshAI GACNNNNGTC 1 cut(s) 144
Psp6I CCWGG 2 cut(s) 425, 529
PspGI CCWGG 2 cut(s) 425, 529
PspN4I GGNNCC 2 cut(s) 153, 420
PspXI VCTCGAGB 1 cut(s) 249
PstI CTGCAG 1 cut(s) 197
RsaI GTAC 3 cut(s) 230, 274, 519
RsaNI GTAC 3 cut(s) 229, 273, 518
SaqAI TTAA 2 cut(s) 570, 602
SatI GCNGC 2 cut(s) 114, 344
ScrFI CCNGG 2 cut(s) 427, 531
SetI ASST 8 cut(s) 256, 281, 348, 353, 424, 539, 555, 570
SfaNI GCATC 4 cut(s) 21, 78, 256, 297
SfcI CTRYAG 2 cut(s) 135, 193
Sfr274I CTCGAG 1 cut(s) 249
SlaI CTCGAG 1 cut(s) 249
SmlI CTYRAG 1 cut(s) 249
SmoI CTYRAG 1 cut(s) 249
Sse9I AATT 4 cut(s) 502, 541, 604, 616
SsiI CCGC 2 cut(s) 395, 624
SspI AATATT 1 cut(s) 330
StyD4I CCNGG 2 cut(s) 425, 529
StyI CCWWGG 1 cut(s) 219
TaaI ACNGT 1 cut(s) 233
TaqI TCGA 1 cut(s) 250
TasI AATT 4 cut(s) 502, 541, 604, 616
TatI WGTACW 1 cut(s) 272
TfiI GAWTC 3 cut(s) 175, 181, 560
Tru1I TTAA 2 cut(s) 570, 602
Tru9I TTAA 2 cut(s) 570, 602
TseI GCWGC 2 cut(s) 113, 343
TspDTI ATGAA 3 cut(s) 39, 116, 173
XapI RAATTY 2 cut(s) 502, 616
XceI RCATGY 1 cut(s) 413
XhoI CTCGAG 1 cut(s) 249
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.