No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G00305 |
| rosa_chinensis | RchiOBHm_Chr7g0218811 RchiOBHm_Chr7g0223101 |
| rosa_laevigata | RLG00000002002 |
| rosa_multiflora | Rmu_sc0001301.1_g000011 Rmu_sc0005784.1_g000006 Rmu_sc0006514.1_g000033 Rmu_sc0022837.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00236340 |
| rosa_rugosa | Rorug07G0212900 |
| rosa_samantha | Rh7AG358000 Rh7AG358100 Rh7BG312100 Rh7BG346200 Rh7CG376100 Rh7CG376300 Rh7DG353500 |
| rosa_wichuraiana | Rw7G030470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 36, 39 |
| AcoI | YGGCCR | 1 cut(s) | 141 |
| AcsI | RAATTY | 2 cut(s) | 81, 119 |
| AcuI | CTGAAG | 2 cut(s) | 42, 117 |
| AfaI | GTAC | 2 cut(s) | 55, 199 |
| AgsI | TTSAA | 2 cut(s) | 105, 244 |
| AhlI | ACTAGT | 1 cut(s) | 194 |
| AjnI | CCWGG | 1 cut(s) | 223 |
| AluBI | AGCT | 1 cut(s) | 135 |
| AluI | AGCT | 1 cut(s) | 135 |
| Alw21I | GWGCWC | 1 cut(s) | 167 |
| Alw44I | GTGCAC | 1 cut(s) | 163 |
| AoxI | GGCC | 1 cut(s) | 141 |
| ApaLI | GTGCAC | 1 cut(s) | 163 |
| ApoI | RAATTY | 2 cut(s) | 81, 119 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 25, 57 |
| AsuII | TTCGAA | 1 cut(s) | 208 |
| BaeGI | GKGCMC | 1 cut(s) | 167 |
| BbsI | GAAGAC | 1 cut(s) | 186 |
| Bbv12I | GWGCWC | 1 cut(s) | 167 |
| BccI | CCATC | 1 cut(s) | 182 |
| BciT130I | CCWGG | 1 cut(s) | 225 |
| BcuI | ACTAGT | 1 cut(s) | 194 |
| BfaI | CTAG | 2 cut(s) | 113, 195 |
| BisI | GCNGC | 1 cut(s) | 37 |
| BlsI | GCNGC | 1 cut(s) | 38 |
| BmcAI | AGTACT | 2 cut(s) | 55, 199 |
| Bme1390I | CCNGG | 1 cut(s) | 225 |
| BmrFI | CCNGG | 1 cut(s) | 225 |
| BmsI | GCATC | 2 cut(s) | 21, 55 |
| BpiI | GAAGAC | 1 cut(s) | 186 |
| Bpu14I | TTCGAA | 1 cut(s) | 208 |
| BseBI | CCWGG | 1 cut(s) | 225 |
| BseGI | GGATG | 2 cut(s) | 70, 220 |
| BseSI | GKGCMC | 1 cut(s) | 167 |
| BshFI | GGCC | 1 cut(s) | 143 |
| BsiHKAI | GWGCWC | 1 cut(s) | 167 |
| BslFI | GGGAC | 1 cut(s) | 205 |
| BsmFI | GGGAC | 1 cut(s) | 205 |
| BsnI | GGCC | 1 cut(s) | 143 |
| Bsp119I | TTCGAA | 1 cut(s) | 208 |
| Bsp1286I | GDGCHC | 1 cut(s) | 167 |
| BspACI | CCGC | 2 cut(s) | 36, 39 |
| BspANI | GGCC | 1 cut(s) | 143 |
| BspT104I | TTCGAA | 1 cut(s) | 208 |
| Bst2UI | CCWGG | 1 cut(s) | 225 |
| Bst4CI | ACNGT | 1 cut(s) | 109 |
| BstBI | TTCGAA | 1 cut(s) | 208 |
| BstF5I | GGATG | 2 cut(s) | 70, 220 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 74 |
| BstNI | CCWGG | 1 cut(s) | 225 |
| BstSCI | CCNGG | 1 cut(s) | 223 |
| BstSLI | GKGCMC | 1 cut(s) | 167 |
| BstV2I | GAAGAC | 1 cut(s) | 186 |
| BsuRI | GGCC | 1 cut(s) | 143 |
| BtsCI | GGATG | 2 cut(s) | 70, 220 |
| BtsI | GCAGTG | 1 cut(s) | 15 |
| BtsIMutI | CAGTG | 1 cut(s) | 15 |
| Csp6I | GTAC | 2 cut(s) | 54, 198 |
| CviAII | CATG | 1 cut(s) | 124 |
| CviJI | RGCY | 4 cut(s) | 128, 135, 143, 235 |
| CviKI_1 | RGCY | 4 cut(s) | 128, 135, 143, 235 |
| CviQI | GTAC | 2 cut(s) | 54, 198 |
| EaeI | YGGCCR | 1 cut(s) | 141 |
| Eco57I | CTGAAG | 2 cut(s) | 42, 117 |
| EcoRII | CCWGG | 1 cut(s) | 223 |
| FaeI | CATG | 1 cut(s) | 127 |
| FaiI | YATR | 2 cut(s) | 125, 176 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 224 |
| FaqI | GGGAC | 1 cut(s) | 205 |
| FatI | CATG | 1 cut(s) | 123 |
| Fnu4HI | GCNGC | 1 cut(s) | 37 |
| FokI | GGATG | 2 cut(s) | 77, 207 |
| Fsp4HI | GCNGC | 1 cut(s) | 37 |
| FspBI | CTAG | 2 cut(s) | 113, 195 |
| GluI | GCNGC | 1 cut(s) | 37 |
| HaeIII | GGCC | 1 cut(s) | 143 |
| Hin1II | CATG | 1 cut(s) | 127 |
| HinfI | GANTC | 2 cut(s) | 47, 152 |
| Hpy166II | GTNNAC | 1 cut(s) | 165 |
| Hpy188I | TCNGA | 1 cut(s) | 157 |
| Hpy188III | TCNNGA | 2 cut(s) | 44, 113 |
| Hpy8I | GTNNAC | 1 cut(s) | 165 |
| HpyAV | CCTTC | 3 cut(s) | 16, 92, 142 |
| HpyCH4III | ACNGT | 1 cut(s) | 109 |
| HpyCH4V | TGCA | 2 cut(s) | 12, 165 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 74 |
| Hsp92II | CATG | 1 cut(s) | 127 |
| LpnPI | CCDG | 3 cut(s) | 210, 228, 237 |
| LweI | GCATC | 2 cut(s) | 21, 55 |
| MaeI | CTAG | 2 cut(s) | 113, 195 |
| MboII | GAAGA | 1 cut(s) | 191 |
| MhlI | GDGCHC | 1 cut(s) | 167 |
| MluCI | AATT | 2 cut(s) | 81, 119 |
| MseI | TTAA | 1 cut(s) | 250 |
| MspR9I | CCNGG | 1 cut(s) | 225 |
| MvaI | CCWGG | 1 cut(s) | 225 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 74 |
| NlaIII | CATG | 1 cut(s) | 127 |
| NmeAIII | GCCGAG | 1 cut(s) | 169 |
| NspV | TTCGAA | 1 cut(s) | 208 |
| PfeI | GAWTC | 2 cut(s) | 47, 152 |
| PkrI | GCNGC | 1 cut(s) | 38 |
| Psp6I | CCWGG | 1 cut(s) | 223 |
| PspGI | CCWGG | 1 cut(s) | 223 |
| RsaI | GTAC | 2 cut(s) | 55, 199 |
| RsaNI | GTAC | 2 cut(s) | 54, 198 |
| SaqAI | TTAA | 1 cut(s) | 250 |
| SatI | GCNGC | 1 cut(s) | 37 |
| ScaI | AGTACT | 2 cut(s) | 55, 199 |
| ScrFI | CCNGG | 1 cut(s) | 225 |
| SduI | GDGCHC | 1 cut(s) | 167 |
| SetI | ASST | 2 cut(s) | 103, 137 |
| SfaNI | GCATC | 2 cut(s) | 21, 55 |
| SfuI | TTCGAA | 1 cut(s) | 208 |
| SpeI | ACTAGT | 1 cut(s) | 194 |
| Sse9I | AATT | 2 cut(s) | 81, 119 |
| SsiI | CCGC | 2 cut(s) | 36, 39 |
| SspI | AATATT | 1 cut(s) | 247 |
| SspMI | CTAG | 2 cut(s) | 113, 195 |
| StyD4I | CCNGG | 1 cut(s) | 223 |
| TaaI | ACNGT | 1 cut(s) | 109 |
| TaqI | TCGA | 2 cut(s) | 50, 208 |
| TasI | AATT | 2 cut(s) | 81, 119 |
| TatI | WGTACW | 2 cut(s) | 53, 197 |
| TauI | GCSGC | 1 cut(s) | 39 |
| TfiI | GAWTC | 2 cut(s) | 47, 152 |
| Tru1I | TTAA | 1 cut(s) | 250 |
| Tru9I | TTAA | 1 cut(s) | 250 |
| TscAI | CASTG | 1 cut(s) | 22 |
| TspDTI | ATGAA | 3 cut(s) | 75, 112, 209 |
| TspRI | CASTG | 1 cut(s) | 22 |
| VneI | GTGCAC | 1 cut(s) | 163 |
| XapI | RAATTY | 2 cut(s) | 81, 119 |
| XbaI | TCTAGA | 1 cut(s) | 112 |
| XspI | CTAG | 2 cut(s) | 113, 195 |
| ZrmI | AGTACT | 2 cut(s) | 55, 199 |