Rh7CG396800

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Reverse (-)
50622112 .. 50624046
1935 bp
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UTR
Exon/CDS
Intron
Rh7CG396800.1

Sequence Viewer

Length: 180 bp
ATGAGTTCTTCACATGCAAAAAGCATTGCAGCTATTGATGGTCAGGATTGGAGCAACCAGTTTGAAGAATCATATTCAGATTACATTGGAGAGTTGGAGTTTTCTTTTGACGATGTGTACGATCATTACCTACTCCATTCTCGTGTTATCAATGATGATCAGCAAGTGACCATTGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

59

Amino Acids

6.83

Weight (kDa)

4.06

Isoelectric Point (pI)

48.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 119
AgsI TTSAA 1 cut(s) 65
AluBI AGCT 1 cut(s) 32
AluI AGCT 1 cut(s) 32
ApeKI GCWGC 1 cut(s) 29
BauI CACGAG 1 cut(s) 141
BbvI GCAGC 1 cut(s) 41
BccI CCATC 1 cut(s) 32
BclI TGATCA 1 cut(s) 157
BfaI CTAG 1 cut(s) 178
BisI GCNGC 1 cut(s) 30
BlsI GCNGC 1 cut(s) 31
Bse1I ACTGG 1 cut(s) 58
Bse3DI GCAATG 1 cut(s) 24
BseMI GCAATG 1 cut(s) 24
BseNI ACTGG 1 cut(s) 58
BseXI GCAGC 1 cut(s) 41
Bsp143I GATC 2 cut(s) 121, 157
BsrDI GCAATG 1 cut(s) 24
BsrI ACTGG 1 cut(s) 58
BssMI GATC 2 cut(s) 121, 157
BssSI CACGAG 1 cut(s) 141
Bst2BI CACGAG 1 cut(s) 141
BstKTI GATC 2 cut(s) 124, 160
BstMBI GATC 2 cut(s) 121, 157
BstNSI RCATGY 1 cut(s) 17
BstV1I GCAGC 1 cut(s) 41
Csp6I GTAC 1 cut(s) 118
CviAII CATG 1 cut(s) 14
CviJI RGCY 1 cut(s) 32
CviKI_1 RGCY 1 cut(s) 32
CviQI GTAC 1 cut(s) 118
DpnI GATC 2 cut(s) 123, 159
DpnII GATC 2 cut(s) 121, 157
FaeI CATG 1 cut(s) 17
FaiI YATR 2 cut(s) 15, 73
FatI CATG 1 cut(s) 13
FbaI TGATCA 1 cut(s) 157
Fnu4HI GCNGC 1 cut(s) 30
Fsp4HI GCNGC 1 cut(s) 30
FspBI CTAG 1 cut(s) 178
FspEI CC 8 cut(s) 24, 29, 34, 71, 72, 80, 143, 149
GluI GCNGC 1 cut(s) 30
Hin1II CATG 1 cut(s) 17
HinfI GANTC 1 cut(s) 68
Hpy166II GTNNAC 1 cut(s) 118
Hpy188I TCNGA 1 cut(s) 79
Hpy188III TCNNGA 1 cut(s) 44
Hpy8I GTNNAC 1 cut(s) 118
HpyCH4V TGCA 2 cut(s) 17, 29
Hsp92II CATG 1 cut(s) 17
Ksp22I TGATCA 1 cut(s) 157
Kzo9I GATC 2 cut(s) 121, 157
LmnI GCTCC 1 cut(s) 51
LpnPI CCDG 2 cut(s) 29, 71
Lsp1109I GCAGC 1 cut(s) 41
MaeI CTAG 1 cut(s) 178
MaeIII GTNAC 1 cut(s) 166
MalI GATC 2 cut(s) 123, 159
MboI GATC 2 cut(s) 121, 157
MboII GAAGA 1 cut(s) 77
MmeI TCCRAC 1 cut(s) 75
MslI CAYNNNNRTG 1 cut(s) 141
NdeII GATC 2 cut(s) 121, 157
NlaIII CATG 1 cut(s) 17
NmuCI GTSAC 1 cut(s) 166
NspI RCATGY 1 cut(s) 17
PcsI WCGNNNNNNNCGW 1 cut(s) 117
PfeI GAWTC 1 cut(s) 68
PkrI GCNGC 1 cut(s) 31
RsaI GTAC 1 cut(s) 119
RsaNI GTAC 1 cut(s) 118
RseI CAYNNNNRTG 1 cut(s) 141
SatI GCNGC 1 cut(s) 30
Sau3AI GATC 2 cut(s) 121, 157
SetI ASST 2 cut(s) 34, 132
SgeI CNNG 6 cut(s) 26, 56, 70, 153, 155, 176
SmiMI CAYNNNNRTG 1 cut(s) 141
SspMI CTAG 1 cut(s) 178
TfiI GAWTC 1 cut(s) 68
TseFI GTSAC 1 cut(s) 166
TseI GCWGC 1 cut(s) 29
Tsp45I GTSAC 1 cut(s) 166
XceI RCATGY 1 cut(s) 17
XspI CTAG 1 cut(s) 178
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.