Rh7DG189300

Protein TPX2-like isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0005322
Physical Location & Seq
Reverse (-)
17516446 .. 17521541
5096 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG189300.1

Sequence Viewer

Length: 1515 bp
ATGGAAATGGAGGAAGATATGGAGGTGGAGCAAGTGTTTACGGCGCACGAAGTGGACATTGACTACGAGTTTGACGCGGCCAGGTTCTTTGATTTTAGTCGGCACGAGACGCCGGTGGAGGCGCGGCGGGCTGAGCTCTGGTTCGAATCCGCCAAGAGCTATCCTCCTTCTCCTGTTGTGACAAGGATGATACTAGGAGGGGACATTCTCCTGGGAAATGTGAATACCTCCCCAAAATCTAAAGATGTGGAGAATACAAATGGCATTGGCTGTAATATCGGCGCGGGCCAAGAATCGTGTGCAATGGATGTAAATAGCGGAGATTGTGAAGGAATGAATAAAGGGATTTTCGGCAACTTGCAAAGAGTTCTAAATCAATCACATGGAGCAGGCACAGGGTTGACATTCAATCATTCAAAAGGTCAAAATAACTCTTCAGTAAAGCCATCTTTCCCCAGGAAATCAACTTTGATGAAACCTACAGCAAGTCAACTTGCTAAGCAAAATCGCCTCCCTCATATTGGTGGTTCCAGATTTCAGACGCTACATGTTCAAAACAGTGATAAGAGCTTCTGTAGCTCTTCTGGAGTTGAAACTCAAGCTACCAAAAGGCAGAAGTTAGAGGGAGGTCACTCGCAAAAGGTTACTACTGAAGCAATGCAGCAAACTAATTTCATCCACAAGGCACCTAAAAAGGTTGAAACTTTTGATAAGACGCATGCCAAGTTGAAAATTACTATTCCAATAGAGCCTGACTTTGAAACGACATATAGGGCGCAAAGAATAAGGCCTAAGAATGGATCAGTGTTGGAACAAGTGCCATCAGCTCCTCGAAAATTCAAAGCCCGTCCACTGAACAAAAAAATTTTTGAGGCTCCCTCACTGCCACTTCCAAAGAGGAGCACTCCGAAGTTGCCAGAATTTCATGAATTTCGCCTGAAGACAATGGAAAGAGCTATGCAAAATACATCTACTGTTCCATTATCCTCACATCATTTCAATGGTCAAGAGAAGGTGTTGGACAAACCTAGTGCTTCCACTGTTGCAGGAAATGGAAACAGAGAACCCAGAAGGCCGAGTAAATGTCTTAAGCAGGATGGAAGTGATGTAATGCCAAAATTTAAAGCTCGTCCTCTTAATAAAAAGATCTTTTCTAGCAAAGGGGATATCGGTGTTTTCTGGAATAGCAAAAGAGAAACCACTGTACCAATGGAATTTAATTTTCAGACAGAGAGGAGAACTCAGCAGATTCCGCCAACTGATCTTTTCAGTAAGCTCTCTTTAACATCTGAACTCCAGCCAAATAAGGGAACTCAGTTCAACTTGCCTCAGCCAACATCTGTATCAGTGAAGGACTCAAAAGAAAATAGAGCGAATAATTTCCAACCAGAACATAAGATAATGGTAAAAGAGAAATCTTCACTGTTTGGTGGAAAGCAAGCTCTATTTGGGGGTGCCAGGTCCATCAGTGATGTTGATAACAAATCAAGGATGAGGAGTTTGGGAGTCCGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPX2_importin

Protein Analysis

504

Amino Acids

56.31

Weight (kDa)

9.71

Isoelectric Point (pI)

44.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPX2_importin PF12214 243 - 408 1.6e-44 Cell cycle regulated microtubule associated protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 685, 1454
AccII CGCG 3 cut(s) 77, 124, 284
AciI CCGC 8 cut(s) 77, 124, 127, 150, 284, 318, 1253, 1510
AclWI GGATC 1 cut(s) 808
AcoI YGGCCR 1 cut(s) 78
AcsI RAATTY 6 cut(s) 836, 864, 920, 929, 1118, 1214
AcuI CTGAAG 3 cut(s) 420, 672, 959
AcyI GRCGYC 1 cut(s) 110
AdeI CACNNNGTG 1 cut(s) 52
AfaI GTAC 1 cut(s) 1206
AfiI CCNNNNNNNGG 3 cut(s) 521, 797, 1307
AflII CTTAAG 1 cut(s) 1088
AflIII ACRYGT 1 cut(s) 547
AjnI CCWGG 4 cut(s) 80, 210, 455, 1457
Alw21I GWGCWC 2 cut(s) 138, 905
Alw26I GTCTC 1 cut(s) 101
AlwI GGATC 1 cut(s) 808
AoxI GGCC 4 cut(s) 78, 286, 788, 1073
ApeKI GCWGC 1 cut(s) 661
ApoI RAATTY 6 cut(s) 836, 864, 920, 929, 1118, 1214
ArsI GACNNNNNNTTYG 2 cut(s) 53, 85
Asp700I GAANNNNTTC 1 cut(s) 1379
AspLEI GCGC 4 cut(s) 46, 124, 284, 778
AspS9I GGNCC 2 cut(s) 286, 1461
AsuII TTCGAA 1 cut(s) 144
AvaII GGWCC 1 cut(s) 1461
BaeI ACNNNNGTAYC 4 cut(s) 1188, 1221, 1326, 1359
BanI GGYRCC 2 cut(s) 685, 1454
BanII GRGCYC 1 cut(s) 138
BauI CACGAG 1 cut(s) 104
BbsI GAAGAC 1 cut(s) 947
Bbv12I GWGCWC 2 cut(s) 138, 905
BbvCI CCTCAGC 1 cut(s) 1329
BbvI GCAGC 1 cut(s) 673
BccI CCATC 4 cut(s) 454, 829, 1091, 1472
BceAI ACGGC 1 cut(s) 57
BciT130I CCWGG 4 cut(s) 82, 212, 457, 1459
BcoDI GTCTC 1 cut(s) 101
BfaI CTAG 4 cut(s) 194, 1029, 1155, 1513
BfmI CTRYAG 2 cut(s) 480, 574
BfrI CTTAAG 1 cut(s) 1088
BglII AGATCT 1 cut(s) 1146
BisI GCNGC 3 cut(s) 78, 125, 662
BlpI GCTNAGC 2 cut(s) 132, 498
BlsI GCNGC 3 cut(s) 79, 126, 663
Bme1390I CCNGG 4 cut(s) 82, 212, 457, 1459
Bme18I GGWCC 1 cut(s) 1461
BmgT120I GGNCC 2 cut(s) 286, 1461
BmiI GGNNCC 4 cut(s) 529, 687, 876, 1456
BmrFI CCNGG 4 cut(s) 82, 212, 457, 1459
BpiI GAAGAC 1 cut(s) 947
BplI GAGNNNNNCTC 8 cut(s) 148, 180, 863, 895, 889, 921, 1225, 1257
BpmI CTGGAG 2 cut(s) 606, 1280
Bpu10I CCTNAGC 1 cut(s) 1329
Bpu1102I GCTNAGC 2 cut(s) 132, 498
Bpu14I TTCGAA 1 cut(s) 144
BpuEI CTTGAG 1 cut(s) 582
BsaHI GRCGYC 1 cut(s) 110
BsaJI CCNNGG 2 cut(s) 211, 455
BsaXI ACNNNNNCTCC 2 cut(s) 20, 50
Bsc4I CCNNNNNNNGG 3 cut(s) 521, 797, 1307
Bse118I RCCGGY 1 cut(s) 112
Bse3DI GCAATG 2 cut(s) 309, 663
BseBI CCWGG 4 cut(s) 82, 212, 457, 1459
BseDI CCNNGG 2 cut(s) 211, 455
BseGI GGATG 5 cut(s) 192, 313, 675, 1102, 1497
BseLI CCNNNNNNNGG 3 cut(s) 521, 797, 1307
BseMI GCAATG 2 cut(s) 309, 663
BseMII CTCAG 4 cut(s) 123, 1256, 1328, 1343
BseRI GAGGAG 4 cut(s) 819, 913, 1249, 1510
BseXI GCAGC 1 cut(s) 673
Bsh1236I CGCG 3 cut(s) 77, 124, 284
BshFI GGCC 4 cut(s) 80, 288, 790, 1075
BshNI GGYRCC 2 cut(s) 685, 1454
BsiHKAI GWGCWC 2 cut(s) 138, 905
BsiSI CCGG 1 cut(s) 113
BslFI GGGAC 1 cut(s) 215
BslI CCNNNNNNNGG 3 cut(s) 521, 797, 1307
BsmAI GTCTC 1 cut(s) 101
BsmBI CGTCTC 1 cut(s) 101
BsmFI GGGAC 1 cut(s) 215
BsnI GGCC 4 cut(s) 80, 288, 790, 1075
Bsp119I TTCGAA 1 cut(s) 144
Bsp1286I GDGCHC 2 cut(s) 138, 905
Bsp143I GATC 3 cut(s) 800, 1146, 1261
Bsp1720I GCTNAGC 2 cut(s) 132, 498
BspACI CCGC 8 cut(s) 77, 124, 127, 150, 284, 318, 1253, 1510
BspANI GGCC 4 cut(s) 80, 288, 790, 1075
BspCNI CTCAG 4 cut(s) 124, 1255, 1327, 1342
BspFNI CGCG 3 cut(s) 77, 124, 284
BspHI TCATGA 1 cut(s) 925
BspLI GGNNCC 4 cut(s) 529, 687, 876, 1456
BspPI GGATC 1 cut(s) 808
BspQI GCTCTTC 1 cut(s) 586
BspT104I TTCGAA 1 cut(s) 144
BspT107I GGYRCC 2 cut(s) 685, 1454
BspTI CTTAAG 1 cut(s) 1088
BsrDI GCAATG 2 cut(s) 309, 663
BsrFI RCCGGY 1 cut(s) 112
BssAI RCCGGY 1 cut(s) 112
BssECI CCNNGG 2 cut(s) 211, 455
BssMI GATC 3 cut(s) 800, 1146, 1261
BssNI GRCGYC 1 cut(s) 110
BssSI CACGAG 1 cut(s) 104
Bst2BI CACGAG 1 cut(s) 104
Bst2UI CCWGG 4 cut(s) 82, 212, 457, 1459
Bst4CI ACNGT 5 cut(s) 560, 976, 1042, 1204, 1425
Bst6I CTCTTC 2 cut(s) 439, 586
BstACI GRCGYC 1 cut(s) 110
BstAFI CTTAAG 1 cut(s) 1088
BstBI TTCGAA 1 cut(s) 144
BstC8I GCNNGC 5 cut(s) 129, 286, 391, 720, 1440
BstDEI CTNAG 6 cut(s) 132, 498, 792, 1242, 1314, 1329
BstF5I GGATG 5 cut(s) 192, 313, 675, 1102, 1497
BstFNI CGCG 3 cut(s) 77, 124, 284
BstHHI GCGC 4 cut(s) 46, 124, 284, 778
BstKTI GATC 3 cut(s) 803, 1149, 1264
BstMAI GTCTC 1 cut(s) 101
BstMBI GATC 3 cut(s) 800, 1146, 1261
BstMWI GCNNNNNNNGC 5 cut(s) 109, 128, 133, 576, 1252
BstNI CCWGG 4 cut(s) 82, 212, 457, 1459
BstNSI RCATGY 2 cut(s) 551, 722
BstSCI CCNGG 4 cut(s) 80, 210, 455, 1457
BstSFI CTRYAG 2 cut(s) 480, 574
BstUI CGCG 3 cut(s) 77, 124, 284
BstV1I GCAGC 1 cut(s) 673
BstV2I GAAGAC 1 cut(s) 947
BstX2I RGATCY 1 cut(s) 1146
BstYI RGATCY 1 cut(s) 1146
BsuRI GGCC 4 cut(s) 80, 288, 790, 1075
BtsCI GGATG 5 cut(s) 192, 313, 675, 1102, 1497
BtsI GCAGTG 1 cut(s) 881
BtsIMutI CAGTG 9 cut(s) 565, 810, 851, 881, 1038, 1200, 1353, 1421, 1474
Cac8I GCNNGC 5 cut(s) 129, 286, 391, 720, 1440
CciI TCATGA 1 cut(s) 925
CfoI GCGC 4 cut(s) 46, 124, 284, 778
Cfr10I RCCGGY 1 cut(s) 112
Cfr13I GGNCC 2 cut(s) 286, 1461
CseI GACGC 4 cut(s) 83, 118, 550, 724
Csp6I GTAC 1 cut(s) 1205
CviAII CATG 4 cut(s) 383, 548, 719, 926
CviQI GTAC 1 cut(s) 1205
DdeI CTNAG 6 cut(s) 132, 498, 792, 1242, 1314, 1329
DpnI GATC 3 cut(s) 802, 1148, 1263
DpnII GATC 3 cut(s) 800, 1146, 1261
DraI TTTAAA 1 cut(s) 1123
DraIII CACNNNGTG 1 cut(s) 52
EaeI YGGCCR 1 cut(s) 78
Eam1104I CTCTTC 2 cut(s) 439, 586
EarI CTCTTC 2 cut(s) 439, 586
EciI GGCGGA 2 cut(s) 139, 1242
Ecl136II GAGCTC 1 cut(s) 136
Eco147I AGGCCT 1 cut(s) 790
Eco24I GRGCYC 1 cut(s) 138
Eco32I GATATC 1 cut(s) 1168
Eco47I GGWCC 1 cut(s) 1461
Eco53kI GAGCTC 1 cut(s) 136
Eco57I CTGAAG 3 cut(s) 420, 672, 959
EcoICRI GAGCTC 1 cut(s) 136
EcoRII CCWGG 4 cut(s) 80, 210, 455, 1457
EcoRV GATATC 1 cut(s) 1168
EcoT38I GRGCYC 1 cut(s) 138
Esp3I CGTCTC 1 cut(s) 101
FaeI CATG 4 cut(s) 386, 551, 722, 929
FaqI GGGAC 1 cut(s) 215
FatI CATG 4 cut(s) 382, 547, 718, 925
FauI CCCGC 2 cut(s) 120, 277
Fnu4HI GCNGC 3 cut(s) 78, 125, 662
FokI GGATG 5 cut(s) 199, 320, 662, 1109, 1504
FriOI GRGCYC 1 cut(s) 138
Fsp4HI GCNGC 3 cut(s) 78, 125, 662
FspBI CTAG 4 cut(s) 194, 1029, 1155, 1513
GlaI GCGC 4 cut(s) 45, 123, 283, 777
GluI GCNGC 3 cut(s) 78, 125, 662
GsuI CTGGAG 2 cut(s) 606, 1280
HaeIII GGCC 4 cut(s) 80, 288, 790, 1075
HapII CCGG 1 cut(s) 113
HgaI GACGC 4 cut(s) 83, 118, 550, 724
HhaI GCGC 4 cut(s) 46, 124, 284, 778
Hin1I GRCGYC 1 cut(s) 110
Hin1II CATG 4 cut(s) 386, 551, 722, 929
Hin6I GCGC 4 cut(s) 44, 122, 282, 776
HinP1I GCGC 4 cut(s) 44, 122, 282, 776
HincII GTYRAC 2 cut(s) 402, 491
HindII GTYRAC 2 cut(s) 402, 491
HinfI GANTC 5 cut(s) 146, 293, 1249, 1355, 1506
HpaII CCGG 1 cut(s) 113
Hpy166II GTNNAC 5 cut(s) 39, 55, 402, 491, 851
Hpy188I TCNGA 4 cut(s) 540, 909, 1227, 1291
Hpy188III TCNNGA 5 cut(s) 531, 585, 926, 1007, 1180
Hpy8I GTNNAC 5 cut(s) 39, 55, 402, 491, 851
HpyAV CCTTC 5 cut(s) 177, 323, 1006, 1065, 1345
HpyCH4III ACNGT 5 cut(s) 560, 976, 1042, 1204, 1425
HpyCH4V TGCA 5 cut(s) 302, 361, 661, 961, 1046
HpyF10VI GCNNNNNNNGC 5 cut(s) 109, 128, 133, 576, 1252
HpyF3I CTNAG 6 cut(s) 132, 498, 792, 1242, 1314, 1329
Hsp92I GRCGYC 1 cut(s) 110
Hsp92II CATG 4 cut(s) 386, 551, 722, 929
HspAI GCGC 4 cut(s) 44, 122, 282, 776
Kzo9I GATC 3 cut(s) 800, 1146, 1261
LguI GCTCTTC 1 cut(s) 586
LmnI GCTCC 5 cut(s) 28, 386, 832, 880, 900
Lsp1109I GCAGC 1 cut(s) 673
MaeI CTAG 4 cut(s) 194, 1029, 1155, 1513
MaeIII GTNAC 3 cut(s) 178, 629, 643
MalI GATC 3 cut(s) 802, 1148, 1263
MboI GATC 3 cut(s) 800, 1146, 1261
MboII GAAGA 5 cut(s) 26, 426, 573, 952, 1410
MflI RGATCY 1 cut(s) 1146
MhlI GDGCHC 2 cut(s) 138, 905
MlyI GAGTC 2 cut(s) 1349, 1515
MmeI TCCRAC 3 cut(s) 789, 999, 1408
MroXI GAANNNNTTC 1 cut(s) 1379
MseI TTAA 5 cut(s) 1089, 1122, 1137, 1218, 1283
MslI CAYNNNNRTG 2 cut(s) 522, 999
MspCI CTTAAG 1 cut(s) 1088
MspI CCGG 1 cut(s) 113
MspR9I CCNGG 4 cut(s) 82, 212, 457, 1459
MvaI CCWGG 4 cut(s) 82, 212, 457, 1459
MvnI CGCG 3 cut(s) 77, 124, 284
MwoI GCNNNNNNNGC 5 cut(s) 109, 128, 133, 576, 1252
NdeII GATC 3 cut(s) 800, 1146, 1261
NlaIII CATG 4 cut(s) 386, 551, 722, 929
NlaIV GGNNCC 4 cut(s) 529, 687, 876, 1456
NmeAIII GCCGAG 1 cut(s) 1101
NmuCI GTSAC 2 cut(s) 178, 629
NspI RCATGY 2 cut(s) 551, 722
NspV TTCGAA 1 cut(s) 144
PaeI GCATGC 1 cut(s) 722
PagI TCATGA 1 cut(s) 925
PceI AGGCCT 1 cut(s) 790
PciI ACATGT 1 cut(s) 547
PciSI GCTCTTC 1 cut(s) 586
PdmI GAANNNNTTC 1 cut(s) 1379
PfeI GAWTC 3 cut(s) 146, 293, 1249
PkrI GCNGC 3 cut(s) 79, 126, 663
PleI GAGTC 2 cut(s) 1349, 1514
PpsI GAGTC 2 cut(s) 1349, 1514
PscI ACATGT 1 cut(s) 547
Psp124BI GAGCTC 1 cut(s) 138
Psp6I CCWGG 4 cut(s) 80, 210, 455, 1457
PspGI CCWGG 4 cut(s) 80, 210, 455, 1457
PspN4I GGNNCC 4 cut(s) 529, 687, 876, 1456
PspPI GGNCC 2 cut(s) 286, 1461
PsuI RGATCY 1 cut(s) 1146
RsaI GTAC 1 cut(s) 1206
RsaNI GTAC 1 cut(s) 1205
RseI CAYNNNNRTG 2 cut(s) 522, 999
SacI GAGCTC 1 cut(s) 138
SapI GCTCTTC 1 cut(s) 586
SaqAI TTAA 5 cut(s) 1089, 1122, 1137, 1218, 1283
SatI GCNGC 3 cut(s) 78, 125, 662
Sau3AI GATC 3 cut(s) 800, 1146, 1261
Sau96I GGNCC 2 cut(s) 286, 1461
SchI GAGTC 2 cut(s) 1349, 1515
ScrFI CCNGG 4 cut(s) 82, 212, 457, 1459
SduI GDGCHC 2 cut(s) 138, 905
SfcI CTRYAG 2 cut(s) 480, 574
SfuI TTCGAA 1 cut(s) 144
SgrAI CRCCGGYG 1 cut(s) 112
SinI GGWCC 1 cut(s) 1461
SmiMI CAYNNNNRTG 2 cut(s) 522, 999
SmlI CTYRAG 2 cut(s) 597, 1088
SmoI CTYRAG 2 cut(s) 597, 1088
SphI GCATGC 1 cut(s) 722
SseBI AGGCCT 1 cut(s) 790
SsiI CCGC 8 cut(s) 77, 124, 127, 150, 284, 318, 1253, 1510
SspMI CTAG 4 cut(s) 194, 1029, 1155, 1513
SstI GAGCTC 1 cut(s) 138
StuI AGGCCT 1 cut(s) 790
StyD4I CCNGG 4 cut(s) 80, 210, 455, 1457
TaaI ACNGT 5 cut(s) 560, 976, 1042, 1204, 1425
TaqI TCGA 2 cut(s) 144, 832
TauI GCSGC 2 cut(s) 80, 127
TfiI GAWTC 3 cut(s) 146, 293, 1249
Tru1I TTAA 5 cut(s) 1089, 1122, 1137, 1218, 1283
Tru9I TTAA 5 cut(s) 1089, 1122, 1137, 1218, 1283
TscAI CASTG 9 cut(s) 565, 810, 858, 888, 1045, 1207, 1353, 1428, 1474
TseFI GTSAC 2 cut(s) 178, 629
TseI GCWGC 1 cut(s) 661
Tsp45I GTSAC 2 cut(s) 178, 629
TspDTI ATGAA 5 cut(s) 350, 488, 664, 914, 942
TspRI CASTG 9 cut(s) 565, 810, 858, 888, 1045, 1207, 1353, 1428, 1474
Vha464I CTTAAG 1 cut(s) 1088
VpaK11BI GGWCC 1 cut(s) 1461
XapI RAATTY 6 cut(s) 836, 864, 920, 929, 1118, 1214
XceI RCATGY 2 cut(s) 551, 722
XcmI CCANNNNNNNNNTGG 1 cut(s) 1207
XmnI GAANNNNTTC 1 cut(s) 1379
XspI CTAG 4 cut(s) 194, 1029, 1155, 1513
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.