No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G66780 AT5G66780 |
| fragaria_vesca | FvH4_1g13380 FvH4_1g13390 |
| malus_domestica | MD02G1148600.v1.1 MD02G1148700.v1.1 MD15G1262800.v1.1 MD15G1262900.v1.1 |
| prunus_persica | Prupe.7G153900_v2.0.a1 |
| pyrus_communis | pycom02g11710 |
| rosa_chinensis | RchiOBHm_Chr2g0101741 RchiOBHm_Chr2g0101751 |
| rosa_laevigata | RLG00000017097 RLG00000017098 |
| rosa_multiflora | Rmu_co8312965.1_g000001 Rmu_sc0011183.1_g000005 Rmu_sc0011183.1_g000007 Rmu_sc0020365.1_g000007 |
| rosa_roxburghii | Rroxscaffold_2G00141060 Rroxscaffold_2G00141070 |
| rosa_rugosa | Rorug02G0101700 Rorug02G0101800 |
| rosa_samantha | Rh2AG148900 Rh2AG149000 Rh2BG154500 Rh2BG154600 Rh2CG154800 Rh2CG154900 Rh2DG154700 Rh2DG154800 |
| rosa_wichuraiana | Rw2G011630 Rw2G011640 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 134 |
| AgsI | TTSAA | 1 cut(s) | 402 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 208 |
| AjiI | CACGTC | 1 cut(s) | 205 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 300, 332 |
| AluBI | AGCT | 4 cut(s) | 176, 313, 380, 398 |
| AluI | AGCT | 4 cut(s) | 176, 313, 380, 398 |
| Alw26I | GTCTC | 2 cut(s) | 45, 216 |
| Ama87I | CYCGRG | 1 cut(s) | 96 |
| AoxI | GGCC | 1 cut(s) | 114 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 242, 274 |
| AsuHPI | GGTGA | 1 cut(s) | 236 |
| AvaI | CYCGRG | 1 cut(s) | 96 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 346, 378 |
| BccI | CCATC | 2 cut(s) | 64, 248 |
| BcoDI | GTCTC | 2 cut(s) | 45, 216 |
| BfaI | CTAG | 1 cut(s) | 173 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 208 |
| BmeT110I | CYCGRG | 1 cut(s) | 96 |
| BmgBI | CACGTC | 1 cut(s) | 205 |
| BmsI | GCATC | 1 cut(s) | 73 |
| BpuEI | CTTGAG | 1 cut(s) | 100 |
| Bse1I | ACTGG | 1 cut(s) | 283 |
| BseGI | GGATG | 1 cut(s) | 315 |
| BseMII | CTCAG | 1 cut(s) | 143 |
| BseNI | ACTGG | 1 cut(s) | 283 |
| BseRI | GAGGAG | 1 cut(s) | 109 |
| BshFI | GGCC | 1 cut(s) | 116 |
| BsiHKCI | CYCGRG | 1 cut(s) | 96 |
| BsiSI | CCGG | 2 cut(s) | 85, 143 |
| BslFI | GGGAC | 1 cut(s) | 215 |
| BsmAI | GTCTC | 2 cut(s) | 45, 216 |
| BsmBI | CGTCTC | 1 cut(s) | 45 |
| BsmFI | GGGAC | 1 cut(s) | 215 |
| BsnI | GGCC | 1 cut(s) | 116 |
| BsoBI | CYCGRG | 1 cut(s) | 96 |
| BspANI | GGCC | 1 cut(s) | 116 |
| BspCNI | CTCAG | 1 cut(s) | 142 |
| BsrI | ACTGG | 1 cut(s) | 283 |
| Bst4CI | ACNGT | 2 cut(s) | 139, 243 |
| BstC8I | GCNNGC | 1 cut(s) | 114 |
| BstDEI | CTNAG | 1 cut(s) | 129 |
| BstF5I | GGATG | 1 cut(s) | 315 |
| BstMAI | GTCTC | 2 cut(s) | 45, 216 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 310 |
| BsuRI | GGCC | 1 cut(s) | 116 |
| BtrI | CACGTC | 1 cut(s) | 205 |
| BtsCI | GGATG | 1 cut(s) | 315 |
| Cac8I | GCNNGC | 1 cut(s) | 114 |
| CseI | GACGC | 1 cut(s) | 27 |
| CviAII | CATG | 3 cut(s) | 8, 160, 320 |
| CviJI | RGCY | 7 cut(s) | 84, 92, 116, 176, 313, 380, 398 |
| CviKI_1 | RGCY | 7 cut(s) | 84, 92, 116, 176, 313, 380, 398 |
| DdeI | CTNAG | 1 cut(s) | 129 |
| DriI | GACNNNNNGTC | 1 cut(s) | 208 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 208 |
| Eco147I | AGGCCT | 1 cut(s) | 116 |
| Eco88I | CYCGRG | 1 cut(s) | 96 |
| Esp3I | CGTCTC | 1 cut(s) | 45 |
| FaeI | CATG | 3 cut(s) | 11, 163, 323 |
| FaiI | YATR | 8 cut(s) | 9, 161, 232, 234, 271, 273, 321, 339 |
| FaqI | GGGAC | 1 cut(s) | 215 |
| FatI | CATG | 3 cut(s) | 7, 159, 319 |
| FauNDI | CATATG | 1 cut(s) | 232 |
| FblI | GTMKAC | 1 cut(s) | 134 |
| FokI | GGATG | 1 cut(s) | 302 |
| FspBI | CTAG | 1 cut(s) | 173 |
| HaeIII | GGCC | 1 cut(s) | 116 |
| HapII | CCGG | 2 cut(s) | 85, 143 |
| HgaI | GACGC | 1 cut(s) | 27 |
| Hin1II | CATG | 3 cut(s) | 11, 163, 323 |
| HincII | GTYRAC | 1 cut(s) | 135 |
| HindII | GTYRAC | 1 cut(s) | 135 |
| HindIII | AAGCTT | 1 cut(s) | 396 |
| HinfI | GANTC | 3 cut(s) | 4, 105, 169 |
| HpaII | CCGG | 2 cut(s) | 85, 143 |
| HphI | GGTGA | 1 cut(s) | 236 |
| Hpy166II | GTNNAC | 1 cut(s) | 135 |
| Hpy188I | TCNGA | 2 cut(s) | 45, 390 |
| Hpy8I | GTNNAC | 1 cut(s) | 135 |
| HpyAV | CCTTC | 1 cut(s) | 385 |
| HpyCH4III | ACNGT | 2 cut(s) | 139, 243 |
| HpyCH4IV | ACGT | 1 cut(s) | 204 |
| HpyCH4V | TGCA | 3 cut(s) | 11, 64, 236 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 310 |
| HpyF3I | CTNAG | 1 cut(s) | 129 |
| HpySE526I | ACGT | 1 cut(s) | 204 |
| Hsp92II | CATG | 3 cut(s) | 11, 163, 323 |
| LmnI | GCTCC | 1 cut(s) | 301 |
| LpnPI | CCDG | 8 cut(s) | 94, 98, 98, 156, 183, 296, 335, 345 |
| LweI | GCATC | 1 cut(s) | 73 |
| MaeI | CTAG | 1 cut(s) | 173 |
| MaeII | ACGT | 1 cut(s) | 204 |
| MaeIII | GTNAC | 2 cut(s) | 74, 361 |
| MluCI | AATT | 1 cut(s) | 406 |
| MmeI | TCCRAC | 1 cut(s) | 68 |
| MnlI | CCTC | 7 cut(s) | 103, 127, 130, 220, 241, 257, 352 |
| MseI | TTAA | 1 cut(s) | 409 |
| MspI | CCGG | 2 cut(s) | 85, 143 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 310 |
| NdeI | CATATG | 1 cut(s) | 232 |
| NlaIII | CATG | 3 cut(s) | 11, 163, 323 |
| PceI | AGGCCT | 1 cut(s) | 116 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 35 |
| PfeI | GAWTC | 3 cut(s) | 4, 105, 169 |
| SalI | GTCGAC | 1 cut(s) | 133 |
| SaqAI | TTAA | 1 cut(s) | 409 |
| SetI | ASST | 6 cut(s) | 178, 207, 315, 363, 382, 400 |
| SfaNI | GCATC | 1 cut(s) | 73 |
| SmlI | CTYRAG | 1 cut(s) | 79 |
| SmoI | CTYRAG | 1 cut(s) | 79 |
| Sse9I | AATT | 1 cut(s) | 406 |
| SseBI | AGGCCT | 1 cut(s) | 116 |
| SspMI | CTAG | 1 cut(s) | 173 |
| StuI | AGGCCT | 1 cut(s) | 116 |
| TaaI | ACNGT | 2 cut(s) | 139, 243 |
| TaiI | ACGT | 1 cut(s) | 207 |
| TaqI | TCGA | 3 cut(s) | 71, 134, 382 |
| TasI | AATT | 1 cut(s) | 406 |
| TfiI | GAWTC | 3 cut(s) | 4, 105, 169 |
| Tru1I | TTAA | 1 cut(s) | 409 |
| Tru9I | TTAA | 1 cut(s) | 409 |
| TspGWI | ACGGA | 1 cut(s) | 380 |
| XmiI | GTMKAC | 1 cut(s) | 134 |
| XspI | CTAG | 1 cut(s) | 173 |