Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0008978

Physical Location & Seq

Genomic Coordinates Reverse (-)

45121089 .. 45125511

Gene Structure 4423 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G020970.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2139 bp

ATGGGTAGCAACTCGAAGGGAAGGACTGTGCTTGAGGTTGGCGCTGATGGGGTGGCGCTCATCACCATCATCAACCCTCCTGTCAATTCCCTCTCCTTTGATGTGTTATTTGGCTTGAAAGAGAGCTATGAGGAGGCTCTGAGGAGAGAAGATGTCAAGGCAATTGTCGTTACAGGTGCAAGAGGGAAATTCTCTGGCGGATTTGATATTACTGCTTTTGGTGGACTTCAAGGAGGCCACAAAGCGGAGCCGAAGCCTGGTTATATATCTGTGGAGGTTATCACTAACAGTGTAGAAGGTGCTAGGAAACCTTCAGTTGCTGCCATTGATGGCCTAGCATTGGGTGGAGGATTAGAGGTTGCAATGGCTTGCCATGCTCGAATATCAACTCCGACTGCCCAATTAGGCTTGCCAGAACTTCAGCTTGGACTCATCCCTGGATTTGGAGGAACGCAACGGCTTCCGCGTCTTGTTGGAATTTCAAAGGCACTTGAAATGATGCTGACTTCAAAACCGGTTAAAGGGGAAGAGGCTCATGATTTAGGCCTTGTTGATGCTATAGTTTCACCTGATGAGTTGGTAAGCACTGCACGTCGGTGGGCCTTGGATATCTTGGAGCGTCGGAGACCATGGGTTGCTACTAGGGAAATACTTAAATTTGCAAGAGCTCAAGTACGGAAGCAGGCTCCCAATCTCAAACATCCATTAGTTTGCATTGATGTTGTTGAAGAGGGTATAGCTTCTGGTGGCCGGGCTGGACTTTGGAAGGAAGCTCAAGAATTTCAAGGACTTTTGCGTGCTGACACTTGCAAGAGCTTGGTCCACGTCTTCTTTGCTCAACGTGGAACATCAAAGGTACCTGGGGTTACTGATCGAGGTTTGGTGCCTAGACGAGTGACTAAGGTTGCTGTCATTGGTGGAGGCTTGATGGGCTCTGGAATAACTACAGCATTGATTCTTAGTAATTATCCAGTGATCCTGAAAGAAGTAAATGAGAAGTTCTTGCAGGCTGGGATTGGTAGAGTCAAAGCCAATCTGCAGAGCCGCGTCAAAAAAGGGAAAATGACTGAAGAGAAGTTTGAGAAGACACTCTCTCTTCTTAAAGGTACCCTGGACTATGAAAGCTTTAGAGATGTTGACATGGTCATAGAGGCAGTTATTGAGAAGGTTTCTTTAAAGCAACAAATTTTTGCTGACCTTGAAAAATATTGCCCACAACATTGCATACTTGCTAGTAACACTTCCACAATTGACTTGAACCTTATTGGAGAGAAGACCAAATCCCATGATCGAATTATTGGAGCCCATTTCTTTAGTCCAGCACATATCATGCCACTTTTGGAAATTGTTCGCACTAATCAGACATCTCCACAAGTTATTGTTGATTTGCTAGAAGTTGGGAAGAAGATAAAGAAAACCCCAGTTGTTGTTGGGAACTGCACTGGATTTGCTGTTAACAGAATGTTCTTTCCTTATACCCAAGCTGGTCTTCTGCTTATTGAGCGTGGTGCAGATGTATATCAGATTGACAGGGCAATCACCAAATTTGGAATGCCCATGGGCCCATTCAGATTGGCTGATCTGGTTGGCTTTGGTGTGGCGATTGCAACTGGCATGCAATTTATTGAGAATTTTCCTGAGCGGACATATAAGTCGATGCTTATTCCTATGATGCAGGAGGATGGGAGAGCAGGTGAAACTACAAAAAGAGGGTTTTATGTTTATGATGATAAACGCAAAGCTAAGCCAGATCCTGAATTGAAGAAATACATTGAGAAGTCAAGAAGCATTTCTGGTCTTTCAATAGATGCCAAGCTAGTGAAGTTACCAGAAAAGGACATTGTGGAAATGATCTTTTTCCCTGTTGTGAATGAGGCCTGCAGAGTGTATGCTGAAGGTATTGCTGTAAAGGCTGCTGACCTTGATATTGCTTCAGTCATGGGCATGGGGTTTCCACCTTACAGGGGAGGTATCATGTTCTGGGCCGATTTACTTGGATCCAAATACATATATTCAAGACTGGAGCAATGGTCAAACATTTATGGTGAATTTTTCAAGCCTTGTGCCTATTTGGCTGAAAGGGCTGCACAGGGAGCTCCTCTGAGCTCTCCTTTGAAGCAATCAAAATCTCGGTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004165 GO:0004300 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006082 GO:0006629 GO:0006631 GO:0006635 GO:0008150 GO:0008152 GO:0008692 GO:0009056 GO:0009062 GO:0009514 GO:0009987 GO:0016042 GO:0016054 GO:0016829 GO:0016835 GO:0016836 GO:0016853 GO:0016854 GO:0016856 GO:0016860 GO:0016863 GO:0018812 GO:0019395 GO:0019752 GO:0030258 GO:0032787 GO:0034440 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046395 GO:0055114 GO:0071704 GO:0072329 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00071 ko00592 ko01100 ko01110 ko01212 map00071 map00592 map01100 map01110 map01212

Pfam Domains

Protein Families

3HCDH 3HCDH_N ECH_1

Protein Analysis

712

Amino Acids

77.83

Weight (kDa)

9.23

Isoelectric Point (pI)

35.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ECH_1	PF00378	16 - 210	2.1e-40	Enoyl-CoA hydratase/isomerase
ECH_2	PF16113	28 - 197	7.1e-23	Enoyl-CoA hydratase/isomerase
3HCDH_N	PF02737	301 - 479	7.7e-62	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
3HCDH	PF00725	482 - 575	2.9e-21	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008978)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06860
fragaria_vesca	FvH4_4g18500 FvH4_4g18500 FvH4_4g18500
malus_domestica	MD13G1166700.v1.1 MD16G1166400.v1.1
prunus_persica	Prupe.1G133000_v2.0.a1
pyrus_communis	pycom13g14220 pycom16g14060
rosa_chinensis	RchiOBHm_Chr4g0423051
rosa_laevigata	RLG00000007590
rosa_multiflora	Rmu_co8121856.1_g000001 Rmu_sc0006639.1_g000001 Rmu_sc0023965.1_g000001 Rmu_sc0028464.1_g000006
rosa_roxburghii	Rroxscaffold_5G00365130
rosa_rugosa	Rorug04G0183300.1
rosa_samantha	Rh4AG243100 Rh4BG247800 Rh4CG257600 Rh4DG242800
rosa_wichuraiana	Rw4G020970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2137
AarI	CACCTGC	1 cut(s)	1682
AasI	GACNNNNNNGTC	1 cut(s)	1651
Acc36I	ACCTGC	1 cut(s)	1682
Acc65I	GGTACC	2 cut(s)	856, 1106
AccB1I	GGYRCC	3 cut(s)	856, 883, 1106
AccBSI	CCGCTC	1 cut(s)	1642
AccII	CGCG	2 cut(s)	466, 1047
AciI	CCGC	5 cut(s)	198, 245, 464, 1045, 1642
AclWI	GGATC	4 cut(s)	970, 1745, 1992, 2005
AcoI	YGGCCR	1 cut(s)	748
AcsI	RAATTY	8 cut(s)	188, 477, 656, 779, 1185, 1544, 1630, 2048
AcuI	CTGAAG	5 cut(s)	297, 404, 1089, 1914, 1917
AfaI	GTAC	3 cut(s)	675, 858, 1108
AfiI	CCNNNNNNNGG	6 cut(s)	244, 257, 340, 443, 521, 1964
AgeI	ACCGGT	1 cut(s)	514
AjiI	CACGTC	2 cut(s)	593, 826
AjnI	CCWGG	4 cut(s)	256, 436, 859, 1110
AjuI	GAANNNNNNNTTGG	4 cut(s)	408, 440, 1473, 1505
AleI	CACNNNNGTG	1 cut(s)	595
Alw21I	GWGCWC	3 cut(s)	670, 2098, 2108
Alw26I	GTCTC	1 cut(s)	619
AlwI	GGATC	4 cut(s)	970, 1745, 1992, 2005
AlwNI	CAGNNNCTG	2 cut(s)	320, 1754
AoxI	GGCC	8 cut(s)	235, 331, 544, 600, 748, 1561, 1875, 1983
ApaI	GGGCCC	1 cut(s)	1565
ApeKI	GCWGC	3 cut(s)	320, 1913, 2084
ApoI	RAATTY	8 cut(s)	188, 477, 656, 779, 1185, 1544, 1630, 2048
AsiGI	ACCGGT	1 cut(s)	514
Asp700I	GAANNNNTTC	2 cut(s)	1347, 1789
Asp718I	GGTACC	2 cut(s)	856, 1106
AspLEI	GCGC	2 cut(s)	44, 58
AspS9I	GGNCC	5 cut(s)	600, 820, 1561, 1562, 1983
AsuC2I	CCSGG	1 cut(s)	752
AsuHPI	GGTGA	5 cut(s)	55, 558, 1531, 1706, 2057
AvaII	GGWCC	1 cut(s)	820
BaeGI	GKGCMC	1 cut(s)	1565
BamHI	GGATCC	1 cut(s)	1997
BanI	GGYRCC	3 cut(s)	856, 883, 1106
BanII	GRGCYC	6 cut(s)	670, 935, 1306, 1565, 2098, 2108
BbsI	GAAGAC	4 cut(s)	820, 1091, 1280, 1481
Bbv12I	GWGCWC	3 cut(s)	670, 2098, 2108
BbvI	GCAGC	3 cut(s)	307, 1900, 2071
BccI	CCATC	5 cut(s)	41, 74, 323, 922, 1676
BceAI	ACGGC	1 cut(s)	473
BciT130I	CCWGG	4 cut(s)	258, 438, 861, 1112
BcnI	CCSGG	1 cut(s)	752
BcoDI	GTCTC	1 cut(s)	619
BfaI	CTAG	7 cut(s)	303, 335, 642, 888, 1233, 1391, 1817
BfmI	CTRYAG	4 cut(s)	558, 945, 1037, 1879
BfoI	RGCGCY	2 cut(s)	45, 59
BfuAI	ACCTGC	1 cut(s)	1682
BglI	GCCNNNNNGGC	1 cut(s)	2072
BisI	GCNGC	4 cut(s)	321, 1045, 1914, 2085
BlpI	GCTNAGC	1 cut(s)	1743
BlsI	GCNGC	4 cut(s)	322, 1046, 1915, 2086
Bme1390I	CCNGG	5 cut(s)	258, 438, 752, 861, 1112
Bme18I	GGWCC	1 cut(s)	820
BmgBI	CACGTC	2 cut(s)	593, 826
BmgT120I	GGNCC	5 cut(s)	600, 820, 1561, 1562, 1983
BmiI	GGNNCC	8 cut(s)	249, 687, 858, 885, 1108, 1303, 1563, 1999
BmrFI	CCNGG	5 cut(s)	258, 438, 752, 861, 1112
BmrI	ACTGGG	1 cut(s)	1415
BmsI	GCATC	5 cut(s)	489, 544, 1647, 1662, 1798
BmuI	ACTGGG	1 cut(s)	1415
BpiI	GAAGAC	4 cut(s)	820, 1091, 1280, 1481
BpmI	CTGGAG	1 cut(s)	2042
Bpu10I	CCTNAGC	1 cut(s)	1638
Bpu1102I	GCTNAGC	1 cut(s)	1743
BpuEI	CTTGAG	3 cut(s)	53, 654, 759
BpuMI	CCSGG	1 cut(s)	752
BsaBI	GATNNNNATC	1 cut(s)	1518
BsaI	GGTCTC	1 cut(s)	619
BsaJI	CCNNGG	6 cut(s)	436, 603, 629, 860, 1110, 1557
BsaWI	WCCGGW	1 cut(s)	514
BsaXI	ACNNNNNCTCC	4 cut(s)	1678, 1708, 2015, 2045
Bsc4I	CCNNNNNNNGG	6 cut(s)	244, 257, 340, 443, 521, 1964
Bse118I	RCCGGY	1 cut(s)	514
Bse1I	ACTGG	5 cut(s)	971, 1421, 1447, 1615, 2025
Bse3DI	GCAATG	3 cut(s)	369, 1219, 2033
Bse8I	GATNNNNATC	1 cut(s)	1518
BseBI	CCWGG	4 cut(s)	258, 438, 861, 1112
BseDI	CCNNGG	6 cut(s)	436, 603, 629, 860, 1110, 1557
BseGI	GGATG	3 cut(s)	432, 700, 1687
BseJI	GATNNNNATC	1 cut(s)	1518
BseLI	CCNNNNNNNGG	6 cut(s)	244, 257, 340, 443, 521, 1964
BseMI	GCAATG	3 cut(s)	369, 1219, 2033
BseMII	CTCAG	3 cut(s)	131, 1629, 2093
BseNI	ACTGG	5 cut(s)	971, 1421, 1447, 1615, 2025
BseRI	GAGGAG	3 cut(s)	146, 157, 2088
BseSI	GKGCMC	1 cut(s)	1565
BseXI	GCAGC	3 cut(s)	307, 1900, 2071
BseYI	CCCAGC	1 cut(s)	1010
BsgI	GTGCAG	4 cut(s)	573, 1423, 1530, 2070
Bsh1236I	CGCG	2 cut(s)	466, 1047
BshFI	GGCC	8 cut(s)	237, 333, 546, 602, 750, 1563, 1877, 1985
BshNI	GGYRCC	3 cut(s)	856, 883, 1106
BshTI	ACCGGT	1 cut(s)	514
BsiHKAI	GWGCWC	3 cut(s)	670, 2098, 2108
BsiSI	CCGG	2 cut(s)	515, 751
BslI	CCNNNNNNNGG	6 cut(s)	244, 257, 340, 443, 521, 1964
BsmAI	GTCTC	1 cut(s)	619
BsmI	GAATGC	1 cut(s)	1557
BsnI	GGCC	8 cut(s)	237, 333, 546, 602, 750, 1563, 1877, 1985
Bso31I	GGTCTC	1 cut(s)	619
Bsp120I	GGGCCC	1 cut(s)	1561
Bsp1286I	GDGCHC	6 cut(s)	670, 935, 1306, 1565, 2098, 2108
Bsp143I	GATC	7 cut(s)	871, 975, 1288, 1579, 1750, 1851, 1997
Bsp1720I	GCTNAGC	1 cut(s)	1743
Bsp19I	CCATGG	2 cut(s)	629, 1557
BspACI	CCGC	5 cut(s)	198, 245, 464, 1045, 1642
BspANI	GGCC	8 cut(s)	237, 333, 546, 602, 750, 1563, 1877, 1985
BspCNI	CTCAG	3 cut(s)	132, 1630, 2094
BspFNI	CGCG	2 cut(s)	466, 1047
BspHI	TCATGA	1 cut(s)	535
BspLI	GGNNCC	8 cut(s)	249, 687, 858, 885, 1108, 1303, 1563, 1999
BspMAI	CTGCAG	2 cut(s)	1041, 1883
BspMI	ACCTGC	1 cut(s)	1682
BspPI	GGATC	4 cut(s)	970, 1745, 1992, 2005
BspT107I	GGYRCC	3 cut(s)	856, 883, 1106
BspTNI	GGTCTC	1 cut(s)	619
BsrBI	CCGCTC	1 cut(s)	1642
BsrDI	GCAATG	3 cut(s)	369, 1219, 2033
BsrFI	RCCGGY	1 cut(s)	514
BsrI	ACTGG	5 cut(s)	971, 1421, 1447, 1615, 2025
BssAI	RCCGGY	1 cut(s)	514
BssECI	CCNNGG	6 cut(s)	436, 603, 629, 860, 1110, 1557
BssMI	GATC	7 cut(s)	871, 975, 1288, 1579, 1750, 1851, 1997
BssT1I	CCWWGG	3 cut(s)	603, 629, 1557
Bst2UI	CCWGG	4 cut(s)	258, 438, 861, 1112
Bst4CI	ACNGT	2 cut(s)	28, 290
Bst6I	CTCTTC	4 cut(s)	522, 723, 1065, 1101
BstC8I	GCNNGC	7 cut(s)	370, 410, 684, 798, 1008, 1616, 1879
BstDEI	CTNAG	6 cut(s)	140, 900, 959, 1638, 1743, 2102
BstDSI	CCRYGG	2 cut(s)	629, 1557
BstF5I	GGATG	3 cut(s)	432, 700, 1687
BstFNI	CGCG	2 cut(s)	466, 1047
BstH2I	RGCGCY	2 cut(s)	45, 59
BstHHI	GCGC	2 cut(s)	44, 58
BstKTI	GATC	7 cut(s)	874, 978, 1291, 1582, 1753, 1854, 2000
BstMAI	GTCTC	1 cut(s)	619
BstMBI	GATC	7 cut(s)	871, 975, 1288, 1579, 1750, 1851, 1997
BstMWI	GCNNNNNNNGC	7 cut(s)	374, 930, 1501, 1910, 2072, 2081, 2093
BstNI	CCWGG	4 cut(s)	258, 438, 861, 1112
BstNSI	RCATGY	1 cut(s)	1618
BstSCI	CCNGG	5 cut(s)	256, 436, 750, 859, 1110
BstSFI	CTRYAG	4 cut(s)	558, 945, 1037, 1879
BstSLI	GKGCMC	1 cut(s)	1565
BstUI	CGCG	2 cut(s)	466, 1047
BstV1I	GCAGC	3 cut(s)	307, 1900, 2071
BstV2I	GAAGAC	4 cut(s)	820, 1091, 1280, 1481
BstX2I	RGATCY	2 cut(s)	1750, 1997
BstYI	RGATCY	2 cut(s)	1750, 1997
BsuRI	GGCC	8 cut(s)	237, 333, 546, 602, 750, 1563, 1877, 1985
BtgI	CCRYGG	2 cut(s)	629, 1557
BtrI	CACGTC	2 cut(s)	593, 826
BtsCI	GGATG	3 cut(s)	432, 700, 1687
BtsI	GCAGTG	1 cut(s)	585
BtsIMutI	CAGTG	4 cut(s)	295, 585, 978, 1440
BveI	ACCTGC	1 cut(s)	1682
Cac8I	GCNNGC	7 cut(s)	370, 410, 684, 798, 1008, 1616, 1879
CaiI	CAGNNNCTG	2 cut(s)	320, 1754
CciI	TCATGA	1 cut(s)	535
CfoI	GCGC	2 cut(s)	44, 58
Cfr10I	RCCGGY	1 cut(s)	514
Cfr13I	GGNCC	5 cut(s)	600, 820, 1561, 1562, 1983
CseI	GACGC	3 cut(s)	455, 608, 1036
Csp6I	GTAC	3 cut(s)	674, 857, 1107
CspAI	ACCGGT	1 cut(s)	514
CviQI	GTAC	3 cut(s)	674, 857, 1107
DdeI	CTNAG	6 cut(s)	140, 900, 959, 1638, 1743, 2102
DpnI	GATC	7 cut(s)	873, 977, 1290, 1581, 1752, 1853, 1999
DpnII	GATC	7 cut(s)	871, 975, 1288, 1579, 1750, 1851, 1997
DraI	TTTAAA	1 cut(s)	1176
DrdI	GACNNNNNNGTC	1 cut(s)	1651
DseDI	GACNNNNNNGTC	1 cut(s)	1651
EaeI	YGGCCR	1 cut(s)	748
Eam1104I	CTCTTC	4 cut(s)	522, 723, 1065, 1101
EarI	CTCTTC	4 cut(s)	522, 723, 1065, 1101
EciI	GGCGGA	1 cut(s)	213
Ecl136II	GAGCTC	3 cut(s)	668, 2096, 2106
Eco130I	CCWWGG	3 cut(s)	603, 629, 1557
Eco147I	AGGCCT	2 cut(s)	546, 1877
Eco24I	GRGCYC	6 cut(s)	670, 935, 1306, 1565, 2098, 2108
Eco31I	GGTCTC	1 cut(s)	619
Eco32I	GATATC	1 cut(s)	610
Eco47I	GGWCC	1 cut(s)	820
Eco53kI	GAGCTC	3 cut(s)	668, 2096, 2106
Eco57I	CTGAAG	5 cut(s)	297, 404, 1089, 1914, 1917
EcoICRI	GAGCTC	3 cut(s)	668, 2096, 2106
EcoRII	CCWGG	4 cut(s)	256, 436, 859, 1110
EcoRV	GATATC	1 cut(s)	610
EcoT14I	CCWWGG	3 cut(s)	603, 629, 1557
EcoT38I	GRGCYC	6 cut(s)	670, 935, 1306, 1565, 2098, 2108
ErhI	CCWWGG	3 cut(s)	603, 629, 1557
FalI	AAGNNNNNCTT	2 cut(s)	1473, 1505
Fnu4HI	GCNGC	4 cut(s)	321, 1045, 1914, 2085
FokI	GGATG	3 cut(s)	419, 687, 1694
FriOI	GRGCYC	6 cut(s)	670, 935, 1306, 1565, 2098, 2108
Fsp4HI	GCNGC	4 cut(s)	321, 1045, 1914, 2085
FspBI	CTAG	7 cut(s)	303, 335, 642, 888, 1233, 1391, 1817
GlaI	GCGC	2 cut(s)	43, 57
GluI	GCNGC	4 cut(s)	321, 1045, 1914, 2085
GsaI	CCCAGC	1 cut(s)	1014
GsuI	CTGGAG	1 cut(s)	2042
HaeII	RGCGCY	2 cut(s)	45, 59
HaeIII	GGCC	8 cut(s)	237, 333, 546, 602, 750, 1563, 1877, 1985
HapII	CCGG	2 cut(s)	515, 751
HgaI	GACGC	3 cut(s)	455, 608, 1036
HhaI	GCGC	2 cut(s)	44, 58
Hin6I	GCGC	2 cut(s)	42, 56
HinP1I	GCGC	2 cut(s)	42, 56
HincII	GTYRAC	2 cut(s)	1138, 1456
HindII	GTYRAC	2 cut(s)	1138, 1456
HindIII	AAGCTT	1 cut(s)	1123
HinfI	GANTC	3 cut(s)	429, 955, 1023
HpaI	GTTAAC	1 cut(s)	1456
HpaII	CCGG	2 cut(s)	515, 751
HphI	GGTGA	5 cut(s)	55, 558, 1531, 1706, 2057
Hpy166II	GTNNAC	4 cut(s)	224, 823, 1138, 1456
Hpy188I	TCNGA	7 cut(s)	141, 393, 624, 1362, 1524, 1571, 2103
Hpy188III	TCNNGA	8 cut(s)	536, 776, 936, 979, 1637, 1754, 1782, 2016
Hpy8I	GTNNAC	4 cut(s)	224, 823, 1138, 1456
Hpy99I	CGWCG	2 cut(s)	597, 624
HpyAV	CCTTC	7 cut(s)	10, 15, 290, 321, 760, 1159, 1889
HpyCH4III	ACNGT	2 cut(s)	28, 290
HpyCH4IV	ACGT	3 cut(s)	592, 825, 841
HpyF10VI	GCNNNNNNNGC	7 cut(s)	374, 930, 1501, 1910, 2072, 2081, 2093
HpyF3I	CTNAG	6 cut(s)	140, 900, 959, 1638, 1743, 2102
HpySE526I	ACGT	3 cut(s)	592, 825, 841
HspAI	GCGC	2 cut(s)	42, 56
KpnI	GGTACC	2 cut(s)	860, 1110
KspAI	GTTAAC	1 cut(s)	1456
Kzo9I	GATC	7 cut(s)	871, 975, 1288, 1579, 1750, 1851, 1997
LmnI	GCTCC	7 cut(s)	247, 616, 691, 1301, 2023, 2093, 2101
Lsp1109I	GCAGC	3 cut(s)	307, 1900, 2071
LweI	GCATC	5 cut(s)	489, 544, 1647, 1662, 1798
MaeI	CTAG	7 cut(s)	303, 335, 642, 888, 1233, 1391, 1817
MaeII	ACGT	3 cut(s)	592, 825, 841
MaeIII	GTNAC	5 cut(s)	169, 865, 895, 1235, 1824
MalI	GATC	7 cut(s)	873, 977, 1290, 1581, 1752, 1853, 1999
MbiI	CCGCTC	1 cut(s)	1642
MboI	GATC	7 cut(s)	871, 975, 1288, 1579, 1750, 1851, 1997
MfeI	CAATTG	2 cut(s)	162, 1248
MflI	RGATCY	2 cut(s)	1750, 1997
MhlI	GDGCHC	6 cut(s)	670, 935, 1306, 1565, 2098, 2108
MlyI	GAGTC	2 cut(s)	423, 1032
MmeI	TCCRAC	3 cut(s)	416, 454, 602
MroXI	GAANNNNTTC	2 cut(s)	1347, 1789
MseI	TTAA	5 cut(s)	519, 654, 1101, 1175, 1455
MslI	CAYNNNNRTG	2 cut(s)	595, 1943
MspI	CCGG	2 cut(s)	515, 751
MspR9I	CCNGG	5 cut(s)	258, 438, 752, 861, 1112
MunI	CAATTG	2 cut(s)	162, 1248
Mva1269I	GAATGC	1 cut(s)	1557
MvaI	CCWGG	4 cut(s)	258, 438, 861, 1112
MvnI	CGCG	2 cut(s)	466, 1047
MwoI	GCNNNNNNNGC	7 cut(s)	374, 930, 1501, 1910, 2072, 2081, 2093
NciI	CCSGG	1 cut(s)	752
NcoI	CCATGG	2 cut(s)	629, 1557
NdeII	GATC	7 cut(s)	871, 975, 1288, 1579, 1750, 1851, 1997
NlaIV	GGNNCC	8 cut(s)	249, 687, 858, 885, 1108, 1303, 1563, 1999
NmuCI	GTSAC	1 cut(s)	895
NspI	RCATGY	1 cut(s)	1618
OliI	CACNNNNGTG	1 cut(s)	595
PaeI	GCATGC	1 cut(s)	1618
PagI	TCATGA	1 cut(s)	535
PaqCI	CACCTGC	1 cut(s)	1682
PceI	AGGCCT	2 cut(s)	546, 1877
PcsI	WCGNNNNNNNCGW	1 cut(s)	463
PctI	GAATGC	1 cut(s)	1557
PdmI	GAANNNNTTC	2 cut(s)	1347, 1789
PfeI	GAWTC	1 cut(s)	955
PflFI	GACNNNGTC	1 cut(s)	1142
PinAI	ACCGGT	1 cut(s)	514
PkrI	GCNGC	4 cut(s)	322, 1046, 1915, 2086
PleI	GAGTC	2 cut(s)	423, 1031
PpsI	GAGTC	2 cut(s)	423, 1031
PsiI	TTATAA	1 cut(s)	2137
Psp124BI	GAGCTC	3 cut(s)	670, 2098, 2108
Psp6I	CCWGG	4 cut(s)	256, 436, 859, 1110
PspFI	CCCAGC	1 cut(s)	1010
PspGI	CCWGG	4 cut(s)	256, 436, 859, 1110
PspN4I	GGNNCC	8 cut(s)	249, 687, 858, 885, 1108, 1303, 1563, 1999
PspOMI	GGGCCC	1 cut(s)	1561
PspPI	GGNCC	5 cut(s)	600, 820, 1561, 1562, 1983
PstI	CTGCAG	2 cut(s)	1041, 1883
PstNI	CAGNNNCTG	2 cut(s)	320, 1754
PsuI	RGATCY	2 cut(s)	1750, 1997
PsyI	GACNNNGTC	1 cut(s)	1142
RsaI	GTAC	3 cut(s)	675, 858, 1108
RsaNI	GTAC	3 cut(s)	674, 857, 1107
RseI	CAYNNNNRTG	2 cut(s)	595, 1943
SacI	GAGCTC	3 cut(s)	670, 2098, 2108
SaqAI	TTAA	5 cut(s)	519, 654, 1101, 1175, 1455
SatI	GCNGC	4 cut(s)	321, 1045, 1914, 2085
Sau3AI	GATC	7 cut(s)	871, 975, 1288, 1579, 1750, 1851, 1997
Sau96I	GGNCC	5 cut(s)	600, 820, 1561, 1562, 1983
SchI	GAGTC	2 cut(s)	423, 1032
ScrFI	CCNGG	5 cut(s)	258, 438, 752, 861, 1112
SduI	GDGCHC	6 cut(s)	670, 935, 1306, 1565, 2098, 2108
SfaNI	GCATC	5 cut(s)	489, 544, 1647, 1662, 1798
SfcI	CTRYAG	4 cut(s)	558, 945, 1037, 1879
SinI	GGWCC	1 cut(s)	820
SmiMI	CAYNNNNRTG	2 cut(s)	595, 1943
SmlI	CTYRAG	3 cut(s)	32, 669, 774
SmoI	CTYRAG	3 cut(s)	32, 669, 774
SphI	GCATGC	1 cut(s)	1618
SseBI	AGGCCT	2 cut(s)	546, 1877
SsiI	CCGC	5 cut(s)	198, 245, 464, 1045, 1642
SspI	AATATT	1 cut(s)	1208
SspMI	CTAG	7 cut(s)	303, 335, 642, 888, 1233, 1391, 1817
SstI	GAGCTC	3 cut(s)	670, 2098, 2108
StuI	AGGCCT	2 cut(s)	546, 1877
StyD4I	CCNGG	5 cut(s)	256, 436, 750, 859, 1110
StyI	CCWWGG	3 cut(s)	603, 629, 1557
TaaI	ACNGT	2 cut(s)	28, 290
TaiI	ACGT	3 cut(s)	595, 828, 844
TaqI	TCGA	5 cut(s)	14, 379, 874, 1291, 1655
TauI	GCSGC	1 cut(s)	1047
TfiI	GAWTC	1 cut(s)	955
Tru1I	TTAA	5 cut(s)	519, 654, 1101, 1175, 1455
Tru9I	TTAA	5 cut(s)	519, 654, 1101, 1175, 1455
TscAI	CASTG	4 cut(s)	295, 592, 978, 1447
TseFI	GTSAC	1 cut(s)	895
TseI	GCWGC	3 cut(s)	320, 1913, 2084
Tsp45I	GTSAC	1 cut(s)	895
TspDTI	ATGAA	1 cut(s)	1134
TspGWI	ACGGA	1 cut(s)	691
TspRI	CASTG	4 cut(s)	295, 592, 978, 1447
Tth111I	GACNNNGTC	1 cut(s)	1142
VpaK11BI	GGWCC	1 cut(s)	820
XapI	RAATTY	8 cut(s)	188, 477, 656, 779, 1185, 1544, 1630, 2048
XceI	RCATGY	1 cut(s)	1618
XmnI	GAANNNNTTC	2 cut(s)	1347, 1789
XspI	CTAG	7 cut(s)	303, 335, 642, 888, 1233, 1391, 1817

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.