Rw4G022550

Very-long-chain enoyl-CoA

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Forward (+)
47994917 .. 47995589
673 bp
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UTR
Exon/CDS
Intron
Rw4G022550.1

Sequence Viewer

Length: 321 bp
ATGAAGGTCATCGTAGTTACAAGGAGTGGTAGAGAGCTTTTCAAGGGTGGCTTTGAGCTCAGTGACTCTGAGGAGATCCATAAGAGATGTAAGTGTTTGCAGATGCATACTTTACATCCTGTAATACTTATGGAATTTTGCAGAATTGGAAATGAAGATTGGATGATTACTTTACATCCTGTTTACTGTGAAGGGTTGGTAGAGTGGGTTAGAGGTTGGGAAGGTAAAGATGGAGCCGTTCCAATTATGGTGCCTAGTTCTACATTTGTAATTGTAAAGCTGAATTGTAATTTCTGCAATCCGATATATTATGGTGCCTAG

Protein Analysis

106

Amino Acids

12.15

Weight (kDa)

6.4

Isoelectric Point (pI)

43.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014722)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 250, 314
AclWI GGATC 1 cut(s) 70
AcsI RAATTY 1 cut(s) 134
AgsI TTSAA 1 cut(s) 43
AjuI GAANNNNNNNTTGG 2 cut(s) 142, 174
AluBI AGCT 3 cut(s) 37, 58, 280
AluI AGCT 3 cut(s) 37, 58, 280
Alw21I GWGCWC 1 cut(s) 60
AlwI GGATC 1 cut(s) 70
ApoI RAATTY 1 cut(s) 134
BanI GGYRCC 2 cut(s) 250, 314
BanII GRGCYC 1 cut(s) 60
Bbv12I GWGCWC 1 cut(s) 60
BccI CCATC 1 cut(s) 224
BceAI ACGGC 1 cut(s) 221
BfaI CTAG 2 cut(s) 255, 319
BmiI GGNNCC 3 cut(s) 235, 252, 316
BmsI GCATC 1 cut(s) 93
BseGI GGATG 3 cut(s) 115, 168, 175
BseMII CTCAG 2 cut(s) 60, 73
BseRI GAGGAG 1 cut(s) 86
BshNI GGYRCC 2 cut(s) 250, 314
BsiHKAI GWGCWC 1 cut(s) 60
Bsp1286I GDGCHC 1 cut(s) 60
Bsp143I GATC 1 cut(s) 75
BspCNI CTCAG 2 cut(s) 61, 72
BspLI GGNNCC 3 cut(s) 235, 252, 316
BspPI GGATC 1 cut(s) 70
BspT107I GGYRCC 2 cut(s) 250, 314
BssMI GATC 1 cut(s) 75
Bst4CI ACNGT 1 cut(s) 188
BstDEI CTNAG 2 cut(s) 59, 69
BstF5I GGATG 3 cut(s) 115, 168, 175
BstKTI GATC 1 cut(s) 78
BstMBI GATC 1 cut(s) 75
BstX2I RGATCY 1 cut(s) 75
BstYI RGATCY 1 cut(s) 75
BtsCI GGATG 3 cut(s) 115, 168, 175
BtsIMutI CAGTG 1 cut(s) 67
CviJI RGCY 5 cut(s) 37, 51, 58, 236, 280
CviKI_1 RGCY 5 cut(s) 37, 51, 58, 236, 280
DdeI CTNAG 2 cut(s) 59, 69
DpnI GATC 1 cut(s) 77
DpnII GATC 1 cut(s) 75
Ecl136II GAGCTC 1 cut(s) 58
Eco24I GRGCYC 1 cut(s) 60
Eco53kI GAGCTC 1 cut(s) 58
EcoICRI GAGCTC 1 cut(s) 58
EcoT22I ATGCAT 1 cut(s) 108
EcoT38I GRGCYC 1 cut(s) 60
FaiI YATR 6 cut(s) 81, 108, 131, 248, 307, 312
FalI AAGNNNNNCTT 2 cut(s) 35, 67
FokI GGATG 3 cut(s) 102, 162, 175
FriOI GRGCYC 1 cut(s) 60
FspBI CTAG 2 cut(s) 255, 319
HinfI GANTC 1 cut(s) 65
Hpy166II GTNNAC 1 cut(s) 184
Hpy188I TCNGA 2 cut(s) 70, 303
Hpy8I GTNNAC 1 cut(s) 184
HpyAV CCTTC 2 cut(s) 185, 215
HpyCH4III ACNGT 1 cut(s) 188
HpyCH4V TGCA 4 cut(s) 100, 106, 141, 297
HpyF3I CTNAG 2 cut(s) 59, 69
Kzo9I GATC 1 cut(s) 75
LmnI GCTCC 1 cut(s) 233
LpnPI CCDG 2 cut(s) 132, 192
LweI GCATC 1 cut(s) 93
MaeI CTAG 2 cut(s) 255, 319
MaeIII GTNAC 2 cut(s) 16, 62
MalI GATC 1 cut(s) 77
MboI GATC 1 cut(s) 75
MboII GAAGA 1 cut(s) 167
MflI RGATCY 1 cut(s) 75
MhlI GDGCHC 1 cut(s) 60
MluCI AATT 6 cut(s) 134, 144, 243, 270, 283, 289
MlyI GAGTC 1 cut(s) 59
MnlI CCTC 2 cut(s) 64, 206
Mph1103I ATGCAT 1 cut(s) 108
NdeII GATC 1 cut(s) 75
NlaIV GGNNCC 3 cut(s) 235, 252, 316
NmuCI GTSAC 1 cut(s) 62
NsiI ATGCAT 1 cut(s) 108
PleI GAGTC 1 cut(s) 59
PpsI GAGTC 1 cut(s) 59
Psp124BI GAGCTC 1 cut(s) 60
PspN4I GGNNCC 3 cut(s) 235, 252, 316
PsuI RGATCY 1 cut(s) 75
SacI GAGCTC 1 cut(s) 60
Sau3AI GATC 1 cut(s) 75
SchI GAGTC 1 cut(s) 59
SduI GDGCHC 1 cut(s) 60
SetI ASST 6 cut(s) 9, 39, 60, 217, 226, 282
SfaNI GCATC 1 cut(s) 93
SgeI CNNG 5 cut(s) 33, 55, 131, 191, 267
Sse9I AATT 6 cut(s) 134, 144, 243, 270, 283, 289
SspMI CTAG 2 cut(s) 255, 319
SstI GAGCTC 1 cut(s) 60
TaaI ACNGT 1 cut(s) 188
TasI AATT 6 cut(s) 134, 144, 243, 270, 283, 289
TscAI CASTG 1 cut(s) 67
TseFI GTSAC 1 cut(s) 62
Tsp45I GTSAC 1 cut(s) 62
TspDTI ATGAA 2 cut(s) 17, 168
TspRI CASTG 1 cut(s) 67
XapI RAATTY 1 cut(s) 134
XspI CTAG 2 cut(s) 255, 319
Zsp2I ATGCAT 1 cut(s) 108
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.