Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0005110

Physical Location & Seq

Genomic Coordinates Reverse (-)

73316238 .. 73322047

Gene Structure 5810 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G041700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1746 bp

ATGTCAGGAATTGACCTCACAAGTAGTTCTGAGAAAAGTCAGATTCGTGTTTTCTGTGACAAAGCATTTTCACGGCTGAAGGGATCCGACAGGAATTTACCTCAGGTTGTCAGAGTTCAAAACCTTCTCAATAGAGGGATTGGTGTCCATCATGCAGGACTTCTTCCAATTGTTAAGGAAGTTGTTGAAATGCTCTTTTGTCGAGGTGGTTCTTTGGTGGAGGACATGCTTAAAAGAAGTTTTGCTGAGTTCCATGCTCAGAAGAAACTACCAGATATGCAGCAACTTCTGATGCGAAAGCTTGCTCAGCCTACAAAAAGTATCGAATGTATAAAAGGGGAACCAGCTATTGAGGAGTATTATGACATGCACTTAGAAAAGGAGAAGCATAGAACAGAAGTATTGGAGGCAGTAATGCAGTCCCCTGGTGCCCAACAATTTCTTACATCCGGAAGAGTGGTTGTCATGAAATCACAATCACAGCAGGCCCAGAAATACTTGCTTGGAGTTGTTGTAAAAGCACCTTCTTCTAGTAATAAGCAACACATCGTTCTAGTGCTGAAACCTGAACTACCAGCGACAATCCAAACTCCCCTGGCTAGTGGTAACTTACAAGATACCAAAAACACTGATTCTTCTCAGGGTTACTACGTGGTAGCGAAATCTAAACGTGCTTTTGAAGAAGAGTATTGTACCTCTGTTTCTTCACGCAAAGGATCAGGTGTCATCAACATAAAATTACCACACCATGGTGCTGCTGCTGGGGTGAGATATGAGGTTAGAGGAGCCGATATCACAGACTTCTCATTCATATGCAGTAGCAAAATAAAGATTGACCTAGTCCGGCTTCTTGAGGACTGTAGCAGTGCTGCTTACTCCAAGACAGTGCAACTGCTGTTGGACACAAAACCTAAAGGAGAGGAGTACCCTCTAGCCTTAGATCCATTGAAAGATCTGAAGTTGAAAGACATGCATCTTGTGGAAACATACTACAAATGGACAAACTTAGTGCAGAAGATGGCAAAGAATAAGTGCGATGGATGTATTAAATTGGAGGAACACATTCAGTTAGCAAGAGAGATAAAGAGACACAAAGAGGAAGTTAATGCTCTTAAGTTTCAAATGTCAGATGAAGCACTTCAACAGATGCCAGATTTTCAAGGCCGGATAGATGTTCTGAAGGAAATCGGATGTATAGATGCTGACCTTGTAGTTCAAATAAAAGGCCGTGTCGCATGCGAGATGAATTCTGGGGAGGAGTTGATCTGCACAGAGTGTTTGTTTGAGAACCAACTAGATGACCTGGAACCAGAAGAAGCGGTGGCATTAATGTCGTCCTTCGTTTTTCAGCAGAAGAATACTTCTGAACCTTCACTTACTCCTAAACTTTCTATGGCGAAAGAGAGATTGTACAATACAGCAATAAGACTAGGCAAGTGTCAAGCTGACTTCAAACTTCCATTAAATCCAGAAGAGTACGCCAAAGAGAATCTCAAGTTTGGTCTTGTTGAAGTCGTTTATGAGTGGGCAAAGGGCACACCATTTGCAGATATTTGTGAACTCACAGATGTTCCTGAAGGCATGATAGTCCGGACCATTGTTAGACTTGACGAGACGTGTCGTGAATTCAAAAATGCTGCATCTATTATGGGTAATTCTGCTCTATACAAGAAAATGGAGACAGCTTCAAATGCAATAAAACGTGACATTGTTTTCGCAGCTAGCTTGTACGTAACAGGAGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000184 GO:0000288 GO:0000291 GO:0000956 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010035 GO:0010038 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0015672 GO:0016070 GO:0016071 GO:0016441 GO:0016458 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0019439 GO:0030001 GO:0032991 GO:0034427 GO:0034641 GO:0034655 GO:0035864 GO:0040029 GO:0042221 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043928 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0050896 GO:0051179 GO:0051234 GO:0055087 GO:0060255 GO:0065007 GO:0070035 GO:0070478 GO:0071704 GO:0090304 GO:0140098 GO:1901360 GO:1901361 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

DEAD DSHCT Helicase_C rRNA_proc-arch

Protein Analysis

581

Amino Acids

65.14

Weight (kDa)

6.85

Isoelectric Point (pI)

43.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MTR4-like_stalk	PF21408	74 - 138	3.3e-13	Exosome RNA helicase MTR4-like, stalk
MTR4_beta-barrel	PF13234	142 - 377	2.1e-24	Mtr4-like, beta-barrel domain
DSHCT	PF08148	403 - 573	1.6e-59	DSHCT (NUC185) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005110)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46960 AT3G46960 AT3G46960
fragaria_vesca	FvH4_3g37880 FvH4_3g37880 FvH4_3g37880 FvH4_3g37880 FvH4_3g37880
malus_domestica	MD03G1077900.v1.1 MD11G1082500.v1.1
prunus_persica	Prupe.6G062900_v2.0.a1 Prupe.6G062900_v2.0.a1 Prupe.6G062900_v2.0.a1
pyrus_communis	pycom03g06210 pycom11g07060
rosa_chinensis	RchiOBHm_Chr5g0068091
rosa_laevigata	RLG00000035954
rosa_multiflora	Rmu_sc0000435.1_g000017
rosa_roxburghii	Rroxscaffold_1G00012520 Rroxscaffold_1G00013260
rosa_rugosa	Rorug05G0387900 Rorug05G0388300 Rorug05G0388400 Rorug05G0388500
rosa_samantha	Rh5AG446500 Rh5BG464600 Rh5CG486400 Rh5DG478400
rosa_wichuraiana	Rw5G041700 Rw5G041740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	428
AccB7I	CCANNNNNTGG	1 cut(s)	749
AccIII	TCCGGA	2 cut(s)	449, 1590
AciI	CCGC	1 cut(s)	1319
AclWI	GGATC	4 cut(s)	78, 91, 724, 935
AcsI	RAATTY	3 cut(s)	94, 1246, 1625
AcuI	CTGAAG	4 cut(s)	98, 977, 1199, 1596
AdeI	CACNNNGTG	1 cut(s)	1275
AfaI	GTAC	5 cut(s)	694, 926, 1412, 1478, 1730
AfiI	CCNNNNNNNGG	1 cut(s)	749
AflII	CTTAAG	1 cut(s)	1112
AflIII	ACRYGT	1 cut(s)	1616
AjiI	CACGTC	1 cut(s)	1617
AjnI	CCWGG	3 cut(s)	424, 594, 1302
AleI	CACNNNNGTG	1 cut(s)	750
AluBI	AGCT	6 cut(s)	301, 347, 1445, 1685, 1721, 1725
AluI	AGCT	6 cut(s)	301, 347, 1445, 1685, 1721, 1725
Alw26I	GTCTC	3 cut(s)	1081, 1607, 1673
AlwI	GGATC	4 cut(s)	78, 91, 724, 935
Aor13HI	TCCGGA	2 cut(s)	449, 1590
AoxI	GGCC	3 cut(s)	486, 1162, 1225
ApeKI	GCWGC	6 cut(s)	280, 755, 758, 869, 1637, 1718
ApoI	RAATTY	3 cut(s)	94, 1246, 1625
ArsI	GACNNNNNNTTYG	2 cut(s)	1697, 1729
AseI	ATTAAT	1 cut(s)	1328
Asp700I	GAANNNNTTC	2 cut(s)	1062, 1137
AspS9I	GGNCC	2 cut(s)	487, 1593
AsuHPI	GGTGA	1 cut(s)	778
AsuNHI	GCTAGC	1 cut(s)	1721
AvaII	GGWCC	1 cut(s)	1593
AxyI	CCTNAGG	1 cut(s)	102
BaeGI	GKGCMC	2 cut(s)	433, 1538
BamHI	GGATCC	1 cut(s)	83
BanI	GGYRCC	1 cut(s)	428
BbvI	GCAGC	6 cut(s)	292, 742, 745, 856, 1624, 1730
BccI	CCATC	3 cut(s)	156, 1012, 1031
BceAI	ACGGC	2 cut(s)	89, 1212
BcgI	CGANNNNNNTGC	2 cut(s)	1314, 1348
BciT130I	CCWGG	3 cut(s)	426, 596, 1304
BcoDI	GTCTC	3 cut(s)	1081, 1607, 1673
BfaI	CTAG	8 cut(s)	531, 554, 600, 839, 932, 1295, 1430, 1722
BfmI	CTRYAG	1 cut(s)	859
BfrI	CTTAAG	1 cut(s)	1112
BglII	AGATCT	1 cut(s)	952
BisI	GCNGC	6 cut(s)	281, 756, 759, 870, 1638, 1719
BlpI	GCTNAGC	1 cut(s)	306
BlsI	GCNGC	6 cut(s)	282, 757, 760, 871, 1639, 1720
Bme1390I	CCNGG	3 cut(s)	426, 596, 1304
Bme18I	GGWCC	1 cut(s)	1593
BmgBI	CACGTC	1 cut(s)	1617
BmgT120I	GGNCC	2 cut(s)	487, 1593
BmiI	GGNNCC	5 cut(s)	85, 342, 430, 787, 1308
BmrFI	CCNGG	3 cut(s)	426, 596, 1304
BmsI	GCATC	5 cut(s)	282, 982, 1137, 1189, 1649
BmtI	GCTAGC	1 cut(s)	1725
Bpu1102I	GCTNAGC	1 cut(s)	306
BpuEI	CTTGAG	2 cut(s)	872, 1478
BsaAI	YACGTR	2 cut(s)	652, 1732
BsaJI	CCNNGG	3 cut(s)	424, 594, 748
BsaWI	WCCGGW	2 cut(s)	449, 1590
BsaXI	ACNNNNNCTCC	2 cut(s)	498, 528
Bsc4I	CCNNNNNNNGG	1 cut(s)	749
Bse21I	CCTNAGG	1 cut(s)	102
BseAI	TCCGGA	2 cut(s)	449, 1590
BseBI	CCWGG	3 cut(s)	426, 596, 1304
BseDI	CCNNGG	3 cut(s)	424, 594, 748
BseGI	GGATG	3 cut(s)	446, 1046, 1196
BseLI	CCNNNNNNNGG	1 cut(s)	749
BseMII	CTCAG	6 cut(s)	21, 116, 237, 272, 320, 653
BseRI	GAGGAG	4 cut(s)	368, 798, 935, 1271
BseSI	GKGCMC	2 cut(s)	433, 1538
BseXI	GCAGC	6 cut(s)	292, 742, 745, 856, 1624, 1730
BseYI	CCCAGC	1 cut(s)	761
BsgI	GTGCAG	2 cut(s)	1031, 1252
BshFI	GGCC	3 cut(s)	488, 1164, 1227
BshNI	GGYRCC	1 cut(s)	428
BsiSI	CCGG	4 cut(s)	450, 844, 1165, 1591
BslFI	GGGAC	1 cut(s)	406
BslI	CCNNNNNNNGG	1 cut(s)	749
BsmAI	GTCTC	3 cut(s)	1081, 1607, 1673
BsmBI	CGTCTC	1 cut(s)	1607
BsmFI	GGGAC	1 cut(s)	406
BsnI	GGCC	3 cut(s)	488, 1164, 1227
Bsp1286I	GDGCHC	2 cut(s)	433, 1538
Bsp13I	TCCGGA	2 cut(s)	449, 1590
Bsp1407I	TGTACA	1 cut(s)	1410
Bsp143I	GATC	5 cut(s)	83, 716, 940, 952, 1263
Bsp1720I	GCTNAGC	1 cut(s)	306
Bsp19I	CCATGG	1 cut(s)	748
BspACI	CCGC	1 cut(s)	1319
BspANI	GGCC	3 cut(s)	488, 1164, 1227
BspCNI	CTCAG	6 cut(s)	22, 115, 238, 271, 319, 652
BspEI	TCCGGA	2 cut(s)	449, 1590
BspHI	TCATGA	1 cut(s)	465
BspLI	GGNNCC	5 cut(s)	85, 342, 430, 787, 1308
BspOI	GCTAGC	1 cut(s)	1725
BspPI	GGATC	4 cut(s)	78, 91, 724, 935
BspT107I	GGYRCC	1 cut(s)	428
BspTI	CTTAAG	1 cut(s)	1112
BsrGI	TGTACA	1 cut(s)	1410
BssECI	CCNNGG	3 cut(s)	424, 594, 748
BssMI	GATC	5 cut(s)	83, 716, 940, 952, 1263
BssT1I	CCWWGG	1 cut(s)	748
Bst2UI	CCWGG	3 cut(s)	426, 596, 1304
Bst4CI	ACNGT	2 cut(s)	860, 886
Bst6I	CTCTTC	3 cut(s)	448, 678, 1467
BstAFI	CTTAAG	1 cut(s)	1112
BstAUI	TGTACA	1 cut(s)	1410
BstBAI	YACGTR	2 cut(s)	652, 1732
BstC8I	GCNNGC	4 cut(s)	303, 486, 1237, 1723
BstDEI	CTNAG	9 cut(s)	30, 102, 246, 258, 306, 373, 639, 937, 1006
BstDSI	CCRYGG	1 cut(s)	748
BstF5I	GGATG	3 cut(s)	446, 1046, 1196
BstKTI	GATC	5 cut(s)	86, 719, 943, 955, 1266
BstMAI	GTCTC	3 cut(s)	1081, 1607, 1673
BstMBI	GATC	5 cut(s)	83, 716, 940, 952, 1263
BstMWI	GCNNNNNNNGC	2 cut(s)	307, 1691
BstNI	CCWGG	3 cut(s)	426, 596, 1304
BstNSI	RCATGY	4 cut(s)	229, 370, 973, 1239
BstSCI	CCNGG	3 cut(s)	424, 594, 1302
BstSFI	CTRYAG	1 cut(s)	859
BstSLI	GKGCMC	2 cut(s)	433, 1538
BstSNI	TACGTA	1 cut(s)	1732
BstV1I	GCAGC	6 cut(s)	292, 742, 745, 856, 1624, 1730
BstX2I	RGATCY	3 cut(s)	83, 940, 952
BstYI	RGATCY	3 cut(s)	83, 940, 952
Bsu36I	CCTNAGG	1 cut(s)	102
BsuRI	GGCC	3 cut(s)	488, 1164, 1227
BtgI	CCRYGG	1 cut(s)	748
BtgZI	GCGATG	1 cut(s)	1050
BtrI	CACGTC	1 cut(s)	1617
BtsCI	GGATG	3 cut(s)	446, 1046, 1196
BtsI	GCAGTG	1 cut(s)	871
BtsIMutI	CAGTG	3 cut(s)	627, 871, 891
Cac8I	GCNNGC	4 cut(s)	303, 486, 1237, 1723
CciI	TCATGA	1 cut(s)	465
Cfr13I	GGNCC	2 cut(s)	487, 1593
Csp6I	GTAC	5 cut(s)	693, 925, 1411, 1477, 1729
CviAII	CATG	9 cut(s)	152, 226, 254, 367, 466, 749, 970, 1236, 1582
CviQI	GTAC	5 cut(s)	693, 925, 1411, 1477, 1729
DdeI	CTNAG	9 cut(s)	30, 102, 246, 258, 306, 373, 639, 937, 1006
DpnI	GATC	5 cut(s)	85, 718, 942, 954, 1265
DpnII	GATC	5 cut(s)	83, 716, 940, 952, 1263
DraIII	CACNNNGTG	1 cut(s)	1275
Eam1104I	CTCTTC	3 cut(s)	448, 678, 1467
EarI	CTCTTC	3 cut(s)	448, 678, 1467
Eco105I	TACGTA	1 cut(s)	1732
Eco130I	CCWWGG	1 cut(s)	748
Eco32I	GATATC	1 cut(s)	793
Eco47I	GGWCC	1 cut(s)	1593
Eco57I	CTGAAG	4 cut(s)	98, 977, 1199, 1596
Eco81I	CCTNAGG	1 cut(s)	102
EcoRI	GAATTC	2 cut(s)	1246, 1625
EcoRII	CCWGG	3 cut(s)	424, 594, 1302
EcoRV	GATATC	1 cut(s)	793
EcoT14I	CCWWGG	1 cut(s)	748
EcoT22I	ATGCAT	1 cut(s)	975
ErhI	CCWWGG	1 cut(s)	748
Esp3I	CGTCTC	1 cut(s)	1607
FaeI	CATG	9 cut(s)	155, 229, 257, 370, 469, 752, 973, 1239, 1585
FaqI	GGGAC	1 cut(s)	406
FatI	CATG	9 cut(s)	151, 225, 253, 366, 465, 748, 969, 1235, 1581
FauNDI	CATATG	1 cut(s)	812
Fnu4HI	GCNGC	6 cut(s)	281, 756, 759, 870, 1638, 1719
FokI	GGATG	3 cut(s)	433, 1053, 1203
Fsp4HI	GCNGC	6 cut(s)	281, 756, 759, 870, 1638, 1719
FspBI	CTAG	8 cut(s)	531, 554, 600, 839, 932, 1295, 1430, 1722
GluI	GCNGC	6 cut(s)	281, 756, 759, 870, 1638, 1719
GsaI	CCCAGC	1 cut(s)	765
HaeIII	GGCC	3 cut(s)	488, 1164, 1227
HapII	CCGG	4 cut(s)	450, 844, 1165, 1591
Hin1II	CATG	9 cut(s)	155, 229, 257, 370, 469, 752, 973, 1239, 1585
HindIII	AAGCTT	1 cut(s)	299
HinfI	GANTC	3 cut(s)	43, 632, 1489
HpaII	CCGG	4 cut(s)	450, 844, 1165, 1591
HphI	GGTGA	1 cut(s)	778
Hpy166II	GTNNAC	1 cut(s)	1559
Hpy188III	TCNNGA	8 cut(s)	6, 450, 466, 851, 1469, 1574, 1591, 1622
Hpy8I	GTNNAC	1 cut(s)	1559
HpyAV	CCTTC	7 cut(s)	73, 134, 534, 1174, 1348, 1380, 1571
HpyCH4III	ACNGT	2 cut(s)	860, 886
HpyCH4IV	ACGT	5 cut(s)	651, 670, 1616, 1702, 1731
HpyF10VI	GCNNNNNNNGC	2 cut(s)	307, 1691
HpyF3I	CTNAG	9 cut(s)	30, 102, 246, 258, 306, 373, 639, 937, 1006
HpySE526I	ACGT	5 cut(s)	651, 670, 1616, 1702, 1731
Hsp92II	CATG	9 cut(s)	155, 229, 257, 370, 469, 752, 973, 1239, 1585
Kpn2I	TCCGGA	2 cut(s)	449, 1590
Kzo9I	GATC	5 cut(s)	83, 716, 940, 952, 1263
LmnI	GCTCC	1 cut(s)	785
Lsp1109I	GCAGC	6 cut(s)	292, 742, 745, 856, 1624, 1730
LweI	GCATC	5 cut(s)	282, 982, 1137, 1189, 1649
MaeI	CTAG	8 cut(s)	531, 554, 600, 839, 932, 1295, 1430, 1722
MaeII	ACGT	5 cut(s)	651, 670, 1616, 1702, 1731
MaeIII	GTNAC	5 cut(s)	56, 605, 644, 1703, 1732
MalI	GATC	5 cut(s)	85, 718, 942, 954, 1265
MboI	GATC	5 cut(s)	83, 716, 940, 952, 1263
MfeI	CAATTG	1 cut(s)	168
MflI	RGATCY	3 cut(s)	83, 940, 952
MhlI	GDGCHC	2 cut(s)	433, 1538
MluCI	AATT	9 cut(s)	9, 94, 168, 437, 737, 1049, 1246, 1625, 1654
MmeI	TCCRAC	2 cut(s)	111, 879
Mph1103I	ATGCAT	1 cut(s)	975
MroI	TCCGGA	2 cut(s)	449, 1590
MroXI	GAANNNNTTC	2 cut(s)	1062, 1137
MseI	TTAA	7 cut(s)	174, 231, 1047, 1104, 1113, 1328, 1463
MslI	CAYNNNNRTG	2 cut(s)	750, 811
MspCI	CTTAAG	1 cut(s)	1112
MspI	CCGG	4 cut(s)	450, 844, 1165, 1591
MspR9I	CCNGG	3 cut(s)	426, 596, 1304
MunI	CAATTG	1 cut(s)	168
MvaI	CCWGG	3 cut(s)	426, 596, 1304
MwoI	GCNNNNNNNGC	2 cut(s)	307, 1691
NcoI	CCATGG	1 cut(s)	748
NdeI	CATATG	1 cut(s)	812
NdeII	GATC	5 cut(s)	83, 716, 940, 952, 1263
NheI	GCTAGC	1 cut(s)	1721
NlaIII	CATG	9 cut(s)	155, 229, 257, 370, 469, 752, 973, 1239, 1585
NlaIV	GGNNCC	5 cut(s)	85, 342, 430, 787, 1308
NmuCI	GTSAC	2 cut(s)	56, 1703
NsiI	ATGCAT	1 cut(s)	975
NspI	RCATGY	4 cut(s)	229, 370, 973, 1239
OliI	CACNNNNGTG	1 cut(s)	750
PaeI	GCATGC	1 cut(s)	1239
PagI	TCATGA	1 cut(s)	465
PdmI	GAANNNNTTC	2 cut(s)	1062, 1137
PfeI	GAWTC	3 cut(s)	43, 632, 1489
PflFI	GACNNNGTC	1 cut(s)	839
PflMI	CCANNNNNTGG	1 cut(s)	749
PkrI	GCNGC	6 cut(s)	282, 757, 760, 871, 1639, 1720
Ppu21I	YACGTR	2 cut(s)	652, 1732
PshBI	ATTAAT	1 cut(s)	1328
Psp6I	CCWGG	3 cut(s)	424, 594, 1302
PspFI	CCCAGC	1 cut(s)	761
PspGI	CCWGG	3 cut(s)	424, 594, 1302
PspN4I	GGNNCC	5 cut(s)	85, 342, 430, 787, 1308
PspPI	GGNCC	2 cut(s)	487, 1593
PsuI	RGATCY	3 cut(s)	83, 940, 952
PsyI	GACNNNGTC	1 cut(s)	839
RsaI	GTAC	5 cut(s)	694, 926, 1412, 1478, 1730
RsaNI	GTAC	5 cut(s)	693, 925, 1411, 1477, 1729
RseI	CAYNNNNRTG	2 cut(s)	750, 811
SaqAI	TTAA	7 cut(s)	174, 231, 1047, 1104, 1113, 1328, 1463
SatI	GCNGC	6 cut(s)	281, 756, 759, 870, 1638, 1719
Sau3AI	GATC	5 cut(s)	83, 716, 940, 952, 1263
Sau96I	GGNCC	2 cut(s)	487, 1593
ScrFI	CCNGG	3 cut(s)	426, 596, 1304
SduI	GDGCHC	2 cut(s)	433, 1538
SfaNI	GCATC	5 cut(s)	282, 982, 1137, 1189, 1649
SfcI	CTRYAG	1 cut(s)	859
SinI	GGWCC	1 cut(s)	1593
SmiMI	CAYNNNNRTG	2 cut(s)	750, 811
SmlI	CTYRAG	3 cut(s)	851, 1112, 1493
SmoI	CTYRAG	3 cut(s)	851, 1112, 1493
SnaBI	TACGTA	1 cut(s)	1732
SphI	GCATGC	1 cut(s)	1239
Sse9I	AATT	9 cut(s)	9, 94, 168, 437, 737, 1049, 1246, 1625, 1654
SsiI	CCGC	1 cut(s)	1319
SspMI	CTAG	8 cut(s)	531, 554, 600, 839, 932, 1295, 1430, 1722
StyD4I	CCNGG	3 cut(s)	424, 594, 1302
StyI	CCWWGG	1 cut(s)	748
TaaI	ACNGT	2 cut(s)	860, 886
TaiI	ACGT	5 cut(s)	654, 673, 1619, 1705, 1734
TaqI	TCGA	2 cut(s)	202, 324
TasI	AATT	9 cut(s)	9, 94, 168, 437, 737, 1049, 1246, 1625, 1654
TatI	WGTACW	1 cut(s)	1410
TfiI	GAWTC	3 cut(s)	43, 632, 1489
Tru1I	TTAA	7 cut(s)	174, 231, 1047, 1104, 1113, 1328, 1463
Tru9I	TTAA	7 cut(s)	174, 231, 1047, 1104, 1113, 1328, 1463
TscAI	CASTG	3 cut(s)	634, 871, 891
TseFI	GTSAC	2 cut(s)	56, 1703
TseI	GCWGC	6 cut(s)	280, 755, 758, 869, 1637, 1718
Tsp45I	GTSAC	2 cut(s)	56, 1703
TspDTI	ATGAA	4 cut(s)	482, 799, 1146, 1259
TspRI	CASTG	3 cut(s)	634, 871, 891
Tth111I	GACNNNGTC	1 cut(s)	839
Van91I	CCANNNNNTGG	1 cut(s)	749
Vha464I	CTTAAG	1 cut(s)	1112
VpaK11BI	GGWCC	1 cut(s)	1593
VspI	ATTAAT	1 cut(s)	1328
XapI	RAATTY	3 cut(s)	94, 1246, 1625
XceI	RCATGY	4 cut(s)	229, 370, 973, 1239
XmnI	GAANNNNTTC	2 cut(s)	1062, 1137
XspI	CTAG	8 cut(s)	531, 554, 600, 839, 932, 1295, 1430, 1722
Zsp2I	ATGCAT	1 cut(s)	975

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.