AT1G05160

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
1487378 .. 1491005
3628 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G05160.1

Sequence Viewer

Length: 1473 bp
ATGGCGGAGACAACGAGTTGGATCCCAGTATGGTTTCCTCTGATGGTGTTGGGATGTTTTGGTCTGAATTGGTTGGTCAGGAAGGTGAATGTGTGGCTCTATGAGTCCAGCCTTGGGGAGAACAGGCACTATCTGCCACCAGGTGATTTGGGTTGGCCTTTCATTGGCAACATGTTGTCTTTTCTCAGAGCTTTCAAGACTTCTGACCCTGACTCCTTCACTCGCACTTTAATCAAAAGGTATGGACCTAAAGGTATATATAAAGCACACATGTTCGGGAACCCAAGTATAATAGTAACAACATCAGACACTTGCCGGCGTGTGCTGACAGACGATGATGCGTTCAAGCCAGGTTGGCCAACATCTACAATGGAACTCATTGGAAGGAAGTCATTCGTTGGTATCTCTTTCGAGGAACACAAGCGTCTCAGGCGTTTGACTGCTGCTCCAGTCAATGGCCATGAAGCCCTCTCTACTTATATACCGTACATTGAAGAAAACGTTATTACTGTTCTGGACAAGTGGACCAAAATGGGAGAGTTCGAGTTCTTGACTCATCTGCGTAAGCTCACCTTTAGGATCATCATGTACATCTTTCTCAGCTCTGAGAGTGAGAATGTAATGGATGCATTGGAACGAGAATATACAGCTCTTAACTATGGGGTTCGAGCAATGGCAGTCAATATTCCTGGATTTGCTTATCATAGAGCACTCAAGGCGAGGAAAACACTTGTAGCTGCCTTTCAGTCCATAGTGACTGAGCGCAGAAATCAAAGGAAGCAGAACATTTTATCAAATAAGAAAGATATGTTAGACAATCTTCTTAATGTTAAAGATGAAGATGGAAAAACTTTGGATGACGAAGAGATTATCGATGTTCTTCTGATGTATCTTAATGCCGGTCATGAATCCTCTGGCCACACCATTATGTGGGCTACCGTTTTTCTACAAGAACACCCTGAGGTTCTACAAAGAGCAAAGGCTGAACAAGAAATGATCCTGAAAAGTAGGCCTGAAGGTCAAAAAGGTCTATCTCTAAAAGAAACCCGGAAAATGGAATTCTTATCGCAGGTTGTCGATGAGACACTTCGAGTCATAACATTCTCACTCACTGCTTTTCGAGAGGCAAAGACTGACGTTGAAATGAATGGCTATTTGATCCCAAAAGGTTGGAAGGTTTTGACATGGTTTAGGGATGTCCACATCGACCCTGAAGTCTTTCCAGATCCAAGAAAATTTGATCCTGCTAGATGGGATAATGGTTTCGTACCAAAAGCTGGTGCGTTCCTTCCTTTTGGTGCTGGAAGCCATCTATGCCCGGGAAATGATCTGGCTAAGCTCGAGATTTCAATTTTTCTTCATCATTTCCTCCTCAAATATCAGGTGAAACGGAGCAACCCCGAATGTCCAGTGATGTATCTGCCTCATACCAGACCAACTGATAATTGCTTGGCAAGAATTAGTTATCAGTAA

Protein Analysis

490

Amino Acids

56.41

Weight (kDa)

8.58

Isoelectric Point (pI)

41.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 46 - 466 3.2e-67 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1214
Acc36I ACCTGC 1 cut(s) 1060
AccB7I CCANNNNNTGG 3 cut(s) 455, 930, 1277
AciI CCGC 1 cut(s) 5
AclI AACGTT 1 cut(s) 501
AclWI GGATC 7 cut(s) 16, 29, 587, 991, 1153, 1220, 1235
AcoI YGGCCR 3 cut(s) 356, 457, 916
AcsI RAATTY 2 cut(s) 1058, 1235
AcuI CTGAAG 2 cut(s) 1035, 1233
AdeI CACNNNGTG 1 cut(s) 143
AfaI GTAC 3 cut(s) 488, 590, 1269
AfiI CCNNNNNNNGG 6 cut(s) 114, 164, 455, 930, 1054, 1277
AflIII ACRYGT 2 cut(s) 171, 270
AgsI TTSAA 5 cut(s) 196, 346, 494, 1142, 1350
AjnI CCWGG 3 cut(s) 139, 349, 688
AluBI AGCT 7 cut(s) 191, 568, 603, 650, 737, 1277, 1339
AluI AGCT 7 cut(s) 191, 568, 603, 650, 737, 1277, 1339
Alw21I GWGCWC 1 cut(s) 712
Alw26I GTCTC 3 cut(s) 2, 431, 1076
AlwI GGATC 7 cut(s) 16, 29, 587, 991, 1153, 1220, 1235
Ama87I CYCGRG 2 cut(s) 1318, 1340
AoxI GGCC 5 cut(s) 155, 356, 457, 916, 1010
ApeKI GCWGC 2 cut(s) 443, 737
ApoI RAATTY 2 cut(s) 1058, 1235
Asp700I GAANNNNTTC 2 cut(s) 392, 1218
AspLEI GCGC 1 cut(s) 765
AspS9I GGNCC 2 cut(s) 245, 525
AsuC2I CCSGG 3 cut(s) 1048, 1319, 1320
AsuHPI GGTGA 4 cut(s) 97, 155, 562, 1396
AvaI CYCGRG 2 cut(s) 1318, 1340
AvaII GGWCC 2 cut(s) 245, 525
AxyI CCTNAGG 1 cut(s) 960
BalI TGGCCA 3 cut(s) 358, 459, 918
BamHI GGATCC 1 cut(s) 21
Bbv12I GWGCWC 1 cut(s) 712
BbvI GCAGC 2 cut(s) 430, 724
BccI CCATC 4 cut(s) 37, 836, 1245, 1317
BciT130I CCWGG 3 cut(s) 141, 351, 690
BcnI CCSGG 3 cut(s) 1048, 1319, 1320
BcoDI GTCTC 3 cut(s) 2, 431, 1076
BfaI CTAG 1 cut(s) 1248
BfuAI ACCTGC 1 cut(s) 1060
BglI GCCNNNNNGGC 1 cut(s) 355
BisI GCNGC 2 cut(s) 444, 738
BlpI GCTNAGC 1 cut(s) 1335
BlsI GCNGC 2 cut(s) 445, 739
Bme1390I CCNGG 6 cut(s) 141, 351, 690, 1048, 1319, 1320
Bme18I GGWCC 2 cut(s) 245, 525
BmeT110I CYCGRG 2 cut(s) 1318, 1340
BmgT120I GGNCC 2 cut(s) 245, 525
BmiI GGNNCC 2 cut(s) 23, 281
BmrFI CCNGG 6 cut(s) 141, 351, 690, 1048, 1319, 1320
BmrI ACTGGG 1 cut(s) 20
BmsI GCATC 2 cut(s) 328, 616
BmuI ACTGGG 1 cut(s) 20
BpmI CTGGAG 1 cut(s) 432
Bpu1102I GCTNAGC 1 cut(s) 1335
BpuEI CTTGAG 1 cut(s) 698
BpuMI CCSGG 3 cut(s) 1048, 1319, 1320
Bsa29I ATCGAT 1 cut(s) 873
BsaJI CCNNGG 2 cut(s) 112, 1318
BsaXI ACNNNNNCTCC 4 cut(s) 197, 227, 430, 460
Bsc4I CCNNNNNNNGG 6 cut(s) 114, 164, 455, 930, 1054, 1277
Bse118I RCCGGY 2 cut(s) 315, 899
Bse1I ACTGG 3 cut(s) 26, 449, 1409
Bse21I CCTNAGG 1 cut(s) 960
Bse3DI GCAATG 1 cut(s) 678
BseBI CCWGG 3 cut(s) 141, 351, 690
BseCI ATCGAT 1 cut(s) 873
BseDI CCNNGG 2 cut(s) 112, 1318
BseGI GGATG 4 cut(s) 59, 631, 862, 1201
BseLI CCNNNNNNNGG 6 cut(s) 114, 164, 455, 930, 1054, 1277
BseMI GCAATG 1 cut(s) 678
BseMII CTCAG 6 cut(s) 199, 442, 597, 613, 750, 951
BseNI ACTGG 3 cut(s) 26, 449, 1409
BseRI GAGGAG 1 cut(s) 1361
BseXI GCAGC 2 cut(s) 430, 724
BshFI GGCC 5 cut(s) 157, 358, 459, 918, 1012
BshVI ATCGAT 1 cut(s) 873
BsiHKAI GWGCWC 1 cut(s) 712
BsiHKCI CYCGRG 2 cut(s) 1318, 1340
BsiSI CCGG 4 cut(s) 316, 900, 1048, 1319
BslI CCNNNNNNNGG 6 cut(s) 114, 164, 455, 930, 1054, 1277
BsmAI GTCTC 3 cut(s) 2, 431, 1076
BsmBI CGTCTC 1 cut(s) 431
BsnI GGCC 5 cut(s) 157, 358, 459, 918, 1012
BsoBI CYCGRG 2 cut(s) 1318, 1340
Bsp1286I GDGCHC 1 cut(s) 712
Bsp1407I TGTACA 1 cut(s) 588
Bsp143I GATC 7 cut(s) 21, 579, 996, 1158, 1225, 1240, 1327
Bsp1720I GCTNAGC 1 cut(s) 1335
BspACI CCGC 1 cut(s) 5
BspANI GGCC 5 cut(s) 157, 358, 459, 918, 1012
BspCNI CTCAG 6 cut(s) 198, 441, 598, 612, 751, 952
BspDI ATCGAT 1 cut(s) 873
BspHI TCATGA 1 cut(s) 904
BspLI GGNNCC 2 cut(s) 23, 281
BspMI ACCTGC 1 cut(s) 1060
BspPI GGATC 7 cut(s) 16, 29, 587, 991, 1153, 1220, 1235
BsrDI GCAATG 1 cut(s) 678
BsrFI RCCGGY 2 cut(s) 315, 899
BsrGI TGTACA 1 cut(s) 588
BsrI ACTGG 3 cut(s) 26, 449, 1409
BssAI RCCGGY 2 cut(s) 315, 899
BssECI CCNNGG 2 cut(s) 112, 1318
BssMI GATC 7 cut(s) 21, 579, 996, 1158, 1225, 1240, 1327
BssT1I CCWWGG 1 cut(s) 112
Bst2UI CCWGG 3 cut(s) 141, 351, 690
Bst4CI ACNGT 3 cut(s) 486, 511, 940
Bst6I CTCTTC 1 cut(s) 858
BstAPI GCANNNNNTGC 1 cut(s) 133
BstAUI TGTACA 1 cut(s) 588
BstC8I GCNNGC 1 cut(s) 317
BstDEI CTNAG 7 cut(s) 185, 428, 599, 606, 759, 960, 1335
BstF5I GGATG 4 cut(s) 59, 631, 862, 1201
BstHHI GCGC 1 cut(s) 765
BstKTI GATC 7 cut(s) 24, 582, 999, 1161, 1228, 1243, 1330
BstMAI GTCTC 3 cut(s) 2, 431, 1076
BstMBI GATC 7 cut(s) 21, 579, 996, 1158, 1225, 1240, 1327
BstMWI GCNNNNNNNGC 5 cut(s) 133, 355, 430, 716, 1314
BstNI CCWGG 3 cut(s) 141, 351, 690
BstNSI RCATGY 2 cut(s) 175, 274
BstSCI CCNGG 6 cut(s) 139, 349, 688, 1046, 1317, 1318
BstV1I GCAGC 2 cut(s) 430, 724
BstX2I RGATCY 2 cut(s) 21, 1225
BstXI CCANNNNNNTGG 1 cut(s) 1170
BstYI RGATCY 2 cut(s) 21, 1225
Bsu15I ATCGAT 1 cut(s) 873
Bsu36I CCTNAGG 1 cut(s) 960
BsuRI GGCC 5 cut(s) 157, 358, 459, 918, 1012
BsuTUI ATCGAT 1 cut(s) 873
BtsCI GGATG 4 cut(s) 59, 631, 862, 1201
BtsI GCAGTG 1 cut(s) 1110
BtsIMutI CAGTG 2 cut(s) 1110, 1416
BveI ACCTGC 1 cut(s) 1060
Cac8I GCNNGC 1 cut(s) 317
CciI TCATGA 1 cut(s) 904
CfoI GCGC 1 cut(s) 765
Cfr10I RCCGGY 2 cut(s) 315, 899
Cfr13I GGNCC 2 cut(s) 245, 525
Cfr9I CCCGGG 1 cut(s) 1318
ClaI ATCGAT 1 cut(s) 873
CseI GACGC 1 cut(s) 413
CsiI ACCWGGT 1 cut(s) 139
Csp6I GTAC 3 cut(s) 487, 589, 1268
CviAII CATG 6 cut(s) 172, 271, 461, 586, 905, 1185
CviQI GTAC 3 cut(s) 487, 589, 1268
DdeI CTNAG 7 cut(s) 185, 428, 599, 606, 759, 960, 1335
DpnI GATC 7 cut(s) 23, 581, 998, 1160, 1227, 1242, 1329
DpnII GATC 7 cut(s) 21, 579, 996, 1158, 1225, 1240, 1327
DraIII CACNNNGTG 1 cut(s) 143
DrdI GACNNNNNNGTC 1 cut(s) 1214
DseDI GACNNNNNNGTC 1 cut(s) 1214
EaeI YGGCCR 3 cut(s) 356, 457, 916
Eam1104I CTCTTC 1 cut(s) 858
EarI CTCTTC 1 cut(s) 858
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 1 cut(s) 112
Eco147I AGGCCT 1 cut(s) 1012
Eco47I GGWCC 2 cut(s) 245, 525
Eco57I CTGAAG 2 cut(s) 1035, 1233
Eco81I CCTNAGG 1 cut(s) 960
Eco88I CYCGRG 2 cut(s) 1318, 1340
EcoRI GAATTC 1 cut(s) 1058
EcoRII CCWGG 3 cut(s) 139, 349, 688
EcoT14I CCWWGG 1 cut(s) 112
EcoT22I ATGCAT 1 cut(s) 631
ErhI CCWWGG 1 cut(s) 112
Esp3I CGTCTC 1 cut(s) 431
FaeI CATG 6 cut(s) 175, 274, 464, 589, 908, 1188
FalI AAGNNNNNCTT 2 cut(s) 557, 589
FatI CATG 6 cut(s) 171, 270, 460, 585, 904, 1184
Fnu4HI GCNGC 2 cut(s) 444, 738
FokI GGATG 4 cut(s) 66, 638, 869, 1208
Fsp4HI GCNGC 2 cut(s) 444, 738
FspBI CTAG 1 cut(s) 1248
GlaI GCGC 1 cut(s) 764
GluI GCNGC 2 cut(s) 444, 738
GsuI CTGGAG 1 cut(s) 432
HaeIII GGCC 5 cut(s) 157, 358, 459, 918, 1012
HapII CCGG 4 cut(s) 316, 900, 1048, 1319
HgaI GACGC 1 cut(s) 413
HhaI GCGC 1 cut(s) 765
Hin1II CATG 6 cut(s) 175, 274, 464, 589, 908, 1188
Hin6I GCGC 1 cut(s) 763
HinP1I GCGC 1 cut(s) 763
HinfI GANTC 5 cut(s) 104, 212, 553, 908, 1092
HpaII CCGG 4 cut(s) 316, 900, 1048, 1319
HphI GGTGA 4 cut(s) 97, 155, 562, 1396
Hpy166II GTNNAC 2 cut(s) 525, 1201
Hpy188I TCNGA 7 cut(s) 42, 66, 188, 205, 307, 607, 885
Hpy8I GTNNAC 2 cut(s) 525, 1201
HpyAV CCTTC 6 cut(s) 76, 226, 378, 1010, 1168, 1298
HpyCH4III ACNGT 3 cut(s) 486, 511, 940
HpyCH4IV ACGT 2 cut(s) 501, 1137
HpyCH4V TGCA 1 cut(s) 629
HpyF10VI GCNNNNNNNGC 5 cut(s) 133, 355, 430, 716, 1314
HpyF3I CTNAG 7 cut(s) 185, 428, 599, 606, 759, 960, 1335
HpySE526I ACGT 2 cut(s) 501, 1137
Hsp92II CATG 6 cut(s) 175, 274, 464, 589, 908, 1188
HspAI GCGC 1 cut(s) 763
KroI GCCGGC 1 cut(s) 315
KroNI GCCGGC 1 cut(s) 317
Kzo9I GATC 7 cut(s) 21, 579, 996, 1158, 1225, 1240, 1327
LmnI GCTCC 2 cut(s) 451, 1392
Lsp1109I GCAGC 2 cut(s) 430, 724
LweI GCATC 2 cut(s) 328, 616
MabI ACCWGGT 1 cut(s) 139
MaeI CTAG 1 cut(s) 1248
MaeII ACGT 2 cut(s) 501, 1137
MaeIII GTNAC 2 cut(s) 295, 754
MalI GATC 7 cut(s) 23, 581, 998, 1160, 1227, 1242, 1329
MboI GATC 7 cut(s) 21, 579, 996, 1158, 1225, 1240, 1327
MboII GAAGA 6 cut(s) 506, 812, 851, 872, 875, 1349
MflI RGATCY 2 cut(s) 21, 1225
MhlI GDGCHC 1 cut(s) 712
MlsI TGGCCA 3 cut(s) 358, 459, 918
MluCI AATT 6 cut(s) 67, 1058, 1235, 1350, 1444, 1458
MluNI TGGCCA 3 cut(s) 358, 459, 918
MlyI GAGTC 4 cut(s) 113, 206, 547, 1101
MmeI TCCRAC 1 cut(s) 1151
Mox20I TGGCCA 3 cut(s) 358, 459, 918
Mph1103I ATGCAT 1 cut(s) 631
MroNI GCCGGC 1 cut(s) 315
MroXI GAANNNNTTC 2 cut(s) 392, 1218
MscI TGGCCA 3 cut(s) 358, 459, 918
MseI TTAA 5 cut(s) 230, 654, 825, 831, 894
MslI CAYNNNNRTG 1 cut(s) 926
Msp20I TGGCCA 3 cut(s) 358, 459, 918
MspI CCGG 4 cut(s) 316, 900, 1048, 1319
MspR9I CCNGG 6 cut(s) 141, 351, 690, 1048, 1319, 1320
MvaI CCWGG 3 cut(s) 141, 351, 690
MwoI GCNNNNNNNGC 5 cut(s) 133, 355, 430, 716, 1314
NaeI GCCGGC 1 cut(s) 317
NciI CCSGG 3 cut(s) 1048, 1319, 1320
NdeII GATC 7 cut(s) 21, 579, 996, 1158, 1225, 1240, 1327
NgoMIV GCCGGC 1 cut(s) 315
NlaIII CATG 6 cut(s) 175, 274, 464, 589, 908, 1188
NlaIV GGNNCC 2 cut(s) 23, 281
NmuCI GTSAC 1 cut(s) 754
NsiI ATGCAT 1 cut(s) 631
NspI RCATGY 2 cut(s) 175, 274
PaeR7I CTCGAG 1 cut(s) 1340
PagI TCATGA 1 cut(s) 904
PceI AGGCCT 1 cut(s) 1012
PciI ACATGT 2 cut(s) 171, 270
PdiI GCCGGC 1 cut(s) 317
PdmI GAANNNNTTC 2 cut(s) 392, 1218
PfeI GAWTC 1 cut(s) 908
PflMI CCANNNNNTGG 3 cut(s) 455, 930, 1277
PfoI TCCNGGA 1 cut(s) 688
PkrI GCNGC 2 cut(s) 445, 739
PleI GAGTC 4 cut(s) 112, 206, 547, 1100
PpsI GAGTC 4 cut(s) 112, 206, 547, 1100
PscI ACATGT 2 cut(s) 171, 270
Psp1406I AACGTT 1 cut(s) 501
Psp6I CCWGG 3 cut(s) 139, 349, 688
PspGI CCWGG 3 cut(s) 139, 349, 688
PspN4I GGNNCC 2 cut(s) 23, 281
PspPI GGNCC 2 cut(s) 245, 525
PsuI RGATCY 2 cut(s) 21, 1225
RsaI GTAC 3 cut(s) 488, 590, 1269
RsaNI GTAC 3 cut(s) 487, 589, 1268
RseI CAYNNNNRTG 1 cut(s) 926
SaqAI TTAA 5 cut(s) 230, 654, 825, 831, 894
SatI GCNGC 2 cut(s) 444, 738
Sau3AI GATC 7 cut(s) 21, 579, 996, 1158, 1225, 1240, 1327
Sau96I GGNCC 2 cut(s) 245, 525
SchI GAGTC 4 cut(s) 113, 206, 547, 1101
ScrFI CCNGG 6 cut(s) 141, 351, 690, 1048, 1319, 1320
SduI GDGCHC 1 cut(s) 712
SexAI ACCWGGT 1 cut(s) 139
SfaNI GCATC 2 cut(s) 328, 616
Sfr274I CTCGAG 1 cut(s) 1340
SinI GGWCC 2 cut(s) 245, 525
SlaI CTCGAG 1 cut(s) 1340
SmaI CCCGGG 1 cut(s) 1320
SmiMI CAYNNNNRTG 1 cut(s) 926
SmlI CTYRAG 2 cut(s) 713, 1340
SmoI CTYRAG 2 cut(s) 713, 1340
Sse9I AATT 6 cut(s) 67, 1058, 1235, 1350, 1444, 1458
SseBI AGGCCT 1 cut(s) 1012
SsiI CCGC 1 cut(s) 5
SspI AATATT 1 cut(s) 685
SspMI CTAG 1 cut(s) 1248
StuI AGGCCT 1 cut(s) 1012
StyD4I CCNGG 6 cut(s) 139, 349, 688, 1046, 1317, 1318
StyI CCWWGG 1 cut(s) 112
TaaI ACNGT 3 cut(s) 486, 511, 940
TaiI ACGT 2 cut(s) 504, 1140
TaqI TCGA 9 cut(s) 411, 543, 667, 873, 1077, 1090, 1120, 1206, 1341
TasI AATT 6 cut(s) 67, 1058, 1235, 1350, 1444, 1458
TatI WGTACW 1 cut(s) 588
TfiI GAWTC 1 cut(s) 908
Tru1I TTAA 5 cut(s) 230, 654, 825, 831, 894
Tru9I TTAA 5 cut(s) 230, 654, 825, 831, 894
TscAI CASTG 2 cut(s) 1117, 1416
TseFI GTSAC 1 cut(s) 754
TseI GCWGC 2 cut(s) 443, 737
Tsp45I GTSAC 1 cut(s) 754
TspDTI ATGAA 6 cut(s) 151, 477, 852, 921, 1160, 1349
TspGWI ACGGA 1 cut(s) 1405
TspMI CCCGGG 1 cut(s) 1318
TspRI CASTG 2 cut(s) 1117, 1416
Van91I CCANNNNNTGG 3 cut(s) 455, 930, 1277
VpaK11BI GGWCC 2 cut(s) 245, 525
XapI RAATTY 2 cut(s) 1058, 1235
XceI RCATGY 2 cut(s) 175, 274
XhoI CTCGAG 1 cut(s) 1340
XmaI CCCGGG 1 cut(s) 1318
XmnI GAANNNNTTC 2 cut(s) 392, 1218
XspI CTAG 1 cut(s) 1248
Zsp2I ATGCAT 1 cut(s) 631
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.