Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0001030

Physical Location & Seq

Genomic Coordinates Forward (+)

23349600 .. 23352751

Gene Structure 3152 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG139800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1410 bp

ATGAATGTAAACCGGTGGCTCTATGAAACCCCCTTGGGCGAAAAGCAGTACCGTCTCCCACCTGGTGACTTGGGCTTGCCTTTTATTGGCAACATGTGGTCCTTCCTCAAAGCCTACAAGTCCACTAAACCTGAAACCTTCATCGACTCCTTTGTTTCCAGATTTGGAAAAATTGGAATATACAAGGCTTTCATGTTTGGGAGTCCCAGTATCATTTGTACGGTCCCAGAAACATGTAGAAGAGTTTTGACAGATGATGATGCATTTAAGCCCGGTTGGCCTGCTTCCACCGTTGAACTCATTGGAAAGAAATCATTCGTTTCCATACCCTTTGAAGAGCACAAGCGTCTGAGAAGGCTAACAGCAGCTCCGGTCAATGGTCATGAAGCATTGTCTATGTACATACCATATATTGAGGAGATTGTTATATCTTCTTTGGAAAAATTGGCCACCATGGGACAGATAGAGTTTTTAACTCAACTCAGAAAGATTACTTTCAGAATTATTATGTTCATCTTTCTTAGCACAGAGACTGAGTCTGTGATGGAGGCTCTAGAGAGGGAATATACAGAACTGAACTATGGAGTTAGAGCCATGGCAATCAATATCCCGGGATTTGCTTACCATAAGGCACTTAAGGCTCGGAAAAATCTTGTTGCTATTTTTCAGTCTAGTGTAGATGAGCGCAGAGCCCAAAAGAAGGCTGGCAATTTCTTCAGAAAGAAGAAAGATATGATGGACGCTCTGCTGGATGTTGAAGACGAAGATGGAAGGAAACTTACAGATGAAGAAGTCATTGACATTCTGCTAATGTACTTGAATGCTGGCCATGAGTCTTCTGGCCATACCATCATGTGGGCGACTGTTTTGCTACAAGAACACCCGGAAGTGTTCCAGAAAGCTAAGGCAGAGCAAGAAGAGATTTTAAAGAGGAGGCCACCAACACAGAAGGGACTGACACTTAAGGAATATCGAGAAATGGAATATCTTTCTAAGGTGATAGATGAAACTCTTCGGTTTGTATCATTCTCACTTGTGGTGTTTCGAGAGGCGAATAAAGATGTCAATATAAATGGTTATATCATTCCAAAGGGATGGAAAGCTTTGGCCTGGTTTAGGAGCGTTCACTGGGATTCTGAAATATATCCAAATCCAAGAGAATTTAACCCTTCTAGATGGGATAACTATACACCAAAACCAGCAACTTTTCTTCCCTTCGGAGCTGGAAGCAGGCTGTGCCCGGGAAATGATCTTGCTAAGCTGGAAATTGCTATTTTCCTACACCATTTTCTTCTTGGTTATGAGGTGGAGCGAATTAATCCTCAGTGCCCAATGATCCACTTGCCTCATCCTAGGCCAAAAGACAACTGCTTGGCAAGAATCAAGAAATGTGCACGTTCACGTGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006082 GO:0006629 GO:0006694 GO:0006720 GO:0006721 GO:0007275 GO:0008150 GO:0008152 GO:0008202 GO:0008299 GO:0008610 GO:0009058 GO:0009653 GO:0009685 GO:0009686 GO:0009826 GO:0009846 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010268 GO:0010817 GO:0012505 GO:0016043 GO:0016049 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016125 GO:0016128 GO:0016129 GO:0016131 GO:0016132 GO:0016491 GO:0016705 GO:0016709 GO:0019752 GO:0022414 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0042445 GO:0042446 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0046394 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0048878 GO:0051704 GO:0051777 GO:0055088 GO:0055114 GO:0060560 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00904 ko01100 ko01110 map00904 map01100 map01110

Pfam Domains

Protein Families

p450

Protein Analysis

469

Amino Acids

54.14

Weight (kDa)

8.95

Isoelectric Point (pI)

47.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	20 - 440	4.4e-63	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001030)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05160 AT1G05160 AT2G32440 AT2G32440
fragaria_vesca	FvH4_5g21590 FvH4_5g21600 FvH4_7g07920 FvH4_7g07920 FvH4_7g07920 FvH4_7g07920 FvH4_7g07921
malus_domestica	MD02G1229400.v1.1 MD02G1234200.v1.1 MD06G1030600.v1.1 MD06G1030900.v1.1 MD07G1083200.v1.1
prunus_persica	Prupe.2G108400_v2.0.a1 Prupe.2G108400_v2.0.a1 Prupe.2G108600_v2.0.a1 Prupe.2G108700_v2.0.a1 Prupe.2G109600_v2.0.a1 Prupe.2G109600_v2.0.a1 Prupe.2G109700_v2.0.a1 Prupe.2G109700_v2.0.a1 Prupe.5G041400_v2.0.a1 Prupe.5G041500_v2.0.a1
pyrus_communis	pycom02g19800 pycom06g02560 pycom06g02570 pycom07g06640
rosa_chinensis	RchiOBHm_Chr1g0341341 RchiOBHm_Chr1g0341371 RchiOBHm_Chr7g0209061
rosa_laevigata	RLG00000003171 RLG00000029085 RLG00000029087
rosa_multiflora	Rmu_co8489367.1_g000001 Rmu_sc0000047.1_g000011 Rmu_sc0022318.1_g000002 Rmu_sc0029225.1_g000001 Rmu_ssc0000190.1_g000009
rosa_roxburghii	Rroxscaffold_3G00249790 Rroxscaffold_4G00311980 Rroxscaffold_4G00312000
rosa_rugosa	Rorug01G0157000.1 Rorug01G0157100.1 Rorug01G0157200.1 Rorug07G0108600
rosa_samantha	Rh1AG172000 Rh1BG139700 Rh1BG139800 Rh1CG160000 Rh1DG172100 Rh1DG172200 Rh7AG243100 Rh7BG238100 Rh7CG258300 Rh7DG250100
rosa_wichuraiana	Rw1G014330 Rw1G014340 Rw7G020600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	855
AclWI	GGATC	1 cut(s)	1330
AcoI	YGGCCR	3 cut(s)	447, 826, 841
AcsI	RAATTY	1 cut(s)	1160
AcuI	CTGAAG	1 cut(s)	700
AcvI	CACGTG	1 cut(s)	1403
AdeI	CACNNNGTG	1 cut(s)	65
AfaI	GTAC	4 cut(s)	50, 220, 401, 815
AfiI	CCNNNNNNNGG	5 cut(s)	86, 377, 700, 855, 1116
AflII	CTTAAG	2 cut(s)	635, 962
AflIII	ACRYGT	2 cut(s)	93, 233
AgeI	ACCGGT	1 cut(s)	12
AgsI	TTSAA	4 cut(s)	296, 335, 758, 820
AjnI	CCWGG	2 cut(s)	61, 1109
AluBI	AGCT	5 cut(s)	368, 902, 1103, 1223, 1261
AluI	AGCT	5 cut(s)	368, 902, 1103, 1223, 1261
Alw21I	GWGCWC	2 cut(s)	342, 1396
Alw26I	GTCTC	2 cut(s)	59, 524
Alw44I	GTGCAC	1 cut(s)	1392
AlwI	GGATC	1 cut(s)	1330
AlwNI	CAGNNNCTG	1 cut(s)	533
Ama87I	CYCGRG	2 cut(s)	610, 1240
AoxI	GGCC	7 cut(s)	278, 447, 826, 841, 935, 1107, 1355
ApaLI	GTGCAC	1 cut(s)	1392
ApeKI	GCWGC	1 cut(s)	365
ApoI	RAATTY	1 cut(s)	1160
AseI	ATTAAT	1 cut(s)	1317
AsiGI	ACCGGT	1 cut(s)	12
Asp700I	GAANNNNTTC	2 cut(s)	314, 1011
AspA2I	CCTAGG	1 cut(s)	1352
AspLEI	GCGC	1 cut(s)	687
AspS9I	GGNCC	2 cut(s)	99, 223
AsuC2I	CCSGG	6 cut(s)	273, 611, 612, 884, 1241, 1242
AsuHPI	GGTGA	2 cut(s)	77, 1009
AvaI	CYCGRG	2 cut(s)	610, 1240
AvaII	GGWCC	2 cut(s)	99, 223
AvrII	CCTAGG	1 cut(s)	1352
BaeGI	GKGCMC	3 cut(s)	1241, 1331, 1396
BalI	TGGCCA	3 cut(s)	449, 828, 843
BanII	GRGCYC	1 cut(s)	694
BarI	GAAGNNNNNNTAC	2 cut(s)	763, 795
BbrPI	CACGTG	1 cut(s)	1403
BbsI	GAAGAC	2 cut(s)	765, 828
Bbv12I	GWGCWC	2 cut(s)	342, 1396
BbvI	GCAGC	1 cut(s)	377
BccI	CCATC	6 cut(s)	538, 730, 761, 857, 1089, 1170
BcgI	CGANNNNNNTGC	2 cut(s)	850, 884
BciT130I	CCWGG	2 cut(s)	63, 1111
BcnI	CCSGG	6 cut(s)	273, 611, 612, 884, 1241, 1242
BcoDI	GTCTC	2 cut(s)	59, 524
BfaI	CTAG	4 cut(s)	554, 672, 1173, 1353
BfrI	CTTAAG	2 cut(s)	635, 962
BglI	GCCNNNNNGGC	1 cut(s)	277
BisI	GCNGC	1 cut(s)	366
BlnI	CCTAGG	1 cut(s)	1352
BlpI	GCTNAGC	1 cut(s)	1257
BlsI	GCNGC	1 cut(s)	367
Bme1390I	CCNGG	8 cut(s)	63, 273, 611, 612, 884, 1111, 1241, 1242
Bme18I	GGWCC	2 cut(s)	99, 223
BmeT110I	CYCGRG	2 cut(s)	610, 1240
BmgT120I	GGNCC	2 cut(s)	99, 223
BmiI	GGNNCC	1 cut(s)	225
BmrFI	CCNGG	8 cut(s)	63, 273, 611, 612, 884, 1111, 1241, 1242
BmrI	ACTGGG	2 cut(s)	201, 1138
BmsI	GCATC	1 cut(s)	250
BmuI	ACTGGG	2 cut(s)	201, 1138
BpiI	GAAGAC	2 cut(s)	765, 828
Bpu10I	CCTNAGC	1 cut(s)	903
Bpu1102I	GCTNAGC	1 cut(s)	1257
BpuMI	CCSGG	6 cut(s)	273, 611, 612, 884, 1241, 1242
BsaAI	YACGTR	1 cut(s)	1403
BsaJI	CCNNGG	6 cut(s)	33, 453, 594, 610, 1240, 1352
BsaWI	WCCGGW	2 cut(s)	12, 370
BsaXI	ACNNNNNCTCC	4 cut(s)	193, 223, 352, 382
Bsc4I	CCNNNNNNNGG	5 cut(s)	86, 377, 700, 855, 1116
Bse118I	RCCGGY	1 cut(s)	12
Bse1I	ACTGG	2 cut(s)	207, 1133
BseBI	CCWGG	2 cut(s)	63, 1111
BseDI	CCNNGG	6 cut(s)	33, 453, 594, 610, 1240, 1352
BseGI	GGATG	3 cut(s)	757, 1100, 1348
BseLI	CCNNNNNNNGG	5 cut(s)	86, 377, 700, 855, 1116
BseMII	CTCAG	4 cut(s)	341, 496, 525, 1337
BseNI	ACTGG	2 cut(s)	207, 1133
BseRI	GAGGAG	2 cut(s)	431, 946
BseSI	GKGCMC	3 cut(s)	1241, 1331, 1396
BseXI	GCAGC	1 cut(s)	377
BshFI	GGCC	7 cut(s)	280, 449, 828, 843, 937, 1109, 1357
BshTI	ACCGGT	1 cut(s)	12
BsiHKAI	GWGCWC	2 cut(s)	342, 1396
BsiHKCI	CYCGRG	2 cut(s)	610, 1240
BsiSI	CCGG	6 cut(s)	13, 273, 371, 611, 884, 1241
BslFI	GGGAC	4 cut(s)	189, 209, 471, 966
BslI	CCNNNNNNNGG	5 cut(s)	86, 377, 700, 855, 1116
BsmAI	GTCTC	2 cut(s)	59, 524
BsmBI	CGTCTC	1 cut(s)	59
BsmFI	GGGAC	4 cut(s)	189, 209, 471, 966
BsmI	GAATGC	1 cut(s)	826
BsnI	GGCC	7 cut(s)	280, 449, 828, 843, 937, 1109, 1357
BsoBI	CYCGRG	2 cut(s)	610, 1240
Bsp1286I	GDGCHC	5 cut(s)	342, 694, 1241, 1331, 1396
Bsp1407I	TGTACA	1 cut(s)	399
Bsp143I	GATC	2 cut(s)	1249, 1335
Bsp1720I	GCTNAGC	1 cut(s)	1257
Bsp19I	CCATGG	2 cut(s)	453, 594
BspANI	GGCC	7 cut(s)	280, 449, 828, 843, 937, 1109, 1357
BspCNI	CTCAG	4 cut(s)	342, 495, 526, 1336
BspHI	TCATGA	1 cut(s)	382
BspLI	GGNNCC	1 cut(s)	225
BspPI	GGATC	1 cut(s)	1330
BspQI	GCTCTTC	1 cut(s)	330
BspTI	CTTAAG	2 cut(s)	635, 962
BsrFI	RCCGGY	1 cut(s)	12
BsrGI	TGTACA	1 cut(s)	399
BsrI	ACTGG	2 cut(s)	207, 1133
BssAI	RCCGGY	1 cut(s)	12
BssECI	CCNNGG	6 cut(s)	33, 453, 594, 610, 1240, 1352
BssMI	GATC	2 cut(s)	1249, 1335
BssT1I	CCWWGG	4 cut(s)	33, 453, 594, 1352
Bst2UI	CCWGG	2 cut(s)	63, 1111
Bst4CI	ACNGT	4 cut(s)	53, 223, 292, 865
Bst6I	CTCTTC	4 cut(s)	235, 330, 912, 1017
BstAFI	CTTAAG	2 cut(s)	635, 962
BstAPI	GCANNNNNTGC	1 cut(s)	1236
BstAUI	TGTACA	1 cut(s)	399
BstBAI	YACGTR	1 cut(s)	1403
BstC8I	GCNNGC	5 cut(s)	77, 282, 706, 826, 1232
BstDEI	CTNAG	8 cut(s)	350, 482, 521, 534, 903, 993, 1257, 1323
BstDSI	CCRYGG	2 cut(s)	453, 594
BstENI	CCTNNNNNAGG	1 cut(s)	1114
BstF5I	GGATG	3 cut(s)	757, 1100, 1348
BstHHI	GCGC	1 cut(s)	687
BstKTI	GATC	2 cut(s)	1252, 1338
BstMAI	GTCTC	2 cut(s)	59, 524
BstMBI	GATC	2 cut(s)	1249, 1335
BstMWI	GCNNNNNNNGC	3 cut(s)	277, 638, 1236
BstNI	CCWGG	2 cut(s)	63, 1111
BstNSI	RCATGY	2 cut(s)	97, 237
BstSCI	CCNGG	8 cut(s)	61, 271, 609, 610, 882, 1109, 1239, 1240
BstSLI	GKGCMC	3 cut(s)	1241, 1331, 1396
BstV1I	GCAGC	1 cut(s)	377
BstV2I	GAAGAC	2 cut(s)	765, 828
BstXI	CCANNNNNNTGG	1 cut(s)	1095
BsuRI	GGCC	7 cut(s)	280, 449, 828, 843, 937, 1109, 1357
BtgI	CCRYGG	2 cut(s)	453, 594
BtsCI	GGATG	3 cut(s)	757, 1100, 1348
BtsIMutI	CAGTG	2 cut(s)	1126, 1331
Cac8I	GCNNGC	5 cut(s)	77, 282, 706, 826, 1232
CaiI	CAGNNNCTG	1 cut(s)	533
CciI	TCATGA	1 cut(s)	382
CfoI	GCGC	1 cut(s)	687
Cfr10I	RCCGGY	1 cut(s)	12
Cfr13I	GGNCC	2 cut(s)	99, 223
Cfr9I	CCCGGG	2 cut(s)	610, 1240
CseI	GACGC	2 cut(s)	335, 749
CsiI	ACCWGGT	1 cut(s)	61
Csp6I	GTAC	4 cut(s)	49, 219, 400, 814
CspAI	ACCGGT	1 cut(s)	12
CviAII	CATG	8 cut(s)	94, 193, 234, 383, 454, 595, 830, 853
CviQI	GTAC	4 cut(s)	49, 219, 400, 814
DdeI	CTNAG	8 cut(s)	350, 482, 521, 534, 903, 993, 1257, 1323
DpnI	GATC	2 cut(s)	1251, 1337
DpnII	GATC	2 cut(s)	1249, 1335
DraI	TTTAAA	1 cut(s)	927
DraIII	CACNNNGTG	1 cut(s)	65
EaeI	YGGCCR	3 cut(s)	447, 826, 841
Eam1104I	CTCTTC	4 cut(s)	235, 330, 912, 1017
EarI	CTCTTC	4 cut(s)	235, 330, 912, 1017
Eco130I	CCWWGG	4 cut(s)	33, 453, 594, 1352
Eco24I	GRGCYC	1 cut(s)	694
Eco47I	GGWCC	2 cut(s)	99, 223
Eco57I	CTGAAG	1 cut(s)	700
Eco72I	CACGTG	1 cut(s)	1403
Eco88I	CYCGRG	2 cut(s)	610, 1240
EcoNI	CCTNNNNNAGG	1 cut(s)	1114
EcoRII	CCWGG	2 cut(s)	61, 1109
EcoT14I	CCWWGG	4 cut(s)	33, 453, 594, 1352
EcoT22I	ATGCAT	1 cut(s)	265
EcoT38I	GRGCYC	1 cut(s)	694
ErhI	CCWWGG	4 cut(s)	33, 453, 594, 1352
Esp3I	CGTCTC	1 cut(s)	59
FaeI	CATG	8 cut(s)	97, 196, 237, 386, 457, 598, 833, 856
FaqI	GGGAC	4 cut(s)	189, 209, 471, 966
FatI	CATG	8 cut(s)	93, 192, 233, 382, 453, 594, 829, 852
Fnu4HI	GCNGC	1 cut(s)	366
FokI	GGATG	3 cut(s)	764, 1107, 1335
FriOI	GRGCYC	1 cut(s)	694
Fsp4HI	GCNGC	1 cut(s)	366
FspBI	CTAG	4 cut(s)	554, 672, 1173, 1353
GlaI	GCGC	1 cut(s)	686
GluI	GCNGC	1 cut(s)	366
HaeIII	GGCC	7 cut(s)	280, 449, 828, 843, 937, 1109, 1357
HapII	CCGG	6 cut(s)	13, 273, 371, 611, 884, 1241
HgaI	GACGC	2 cut(s)	335, 749
HhaI	GCGC	1 cut(s)	687
Hin1II	CATG	8 cut(s)	97, 196, 237, 386, 457, 598, 833, 856
Hin6I	GCGC	1 cut(s)	685
HinP1I	GCGC	1 cut(s)	685
HindIII	AAGCTT	1 cut(s)	1101
HinfI	GANTC	6 cut(s)	146, 202, 536, 833, 1133, 1380
HpaII	CCGG	6 cut(s)	13, 273, 371, 611, 884, 1241
HphI	GGTGA	2 cut(s)	77, 1009
Hpy166II	GTNNAC	5 cut(s)	10, 123, 1126, 1394, 1400
Hpy188I	TCNGA	7 cut(s)	351, 485, 500, 645, 719, 1138, 1220
Hpy188III	TCNNGA	8 cut(s)	159, 383, 554, 895, 974, 1046, 1173, 1384
Hpy8I	GTNNAC	5 cut(s)	10, 123, 1126, 1394, 1400
HpyAV	CCTTC	8 cut(s)	112, 148, 348, 694, 765, 943, 1179, 1225
HpyCH4III	ACNGT	4 cut(s)	53, 223, 292, 865
HpyCH4IV	ACGT	2 cut(s)	1396, 1402
HpyCH4V	TGCA	3 cut(s)	263, 1394, 1406
HpyF10VI	GCNNNNNNNGC	3 cut(s)	277, 638, 1236
HpyF3I	CTNAG	8 cut(s)	350, 482, 521, 534, 903, 993, 1257, 1323
HpySE526I	ACGT	2 cut(s)	1396, 1402
Hsp92II	CATG	8 cut(s)	97, 196, 237, 386, 457, 598, 833, 856
HspAI	GCGC	1 cut(s)	685
Kzo9I	GATC	2 cut(s)	1249, 1335
LguI	GCTCTTC	1 cut(s)	330
LmnI	GCTCC	4 cut(s)	373, 1119, 1220, 1309
Lsp1109I	GCAGC	1 cut(s)	377
LweI	GCATC	1 cut(s)	250
MabI	ACCWGGT	1 cut(s)	61
MaeI	CTAG	4 cut(s)	554, 672, 1173, 1353
MaeII	ACGT	2 cut(s)	1396, 1402
MaeIII	GTNAC	1 cut(s)	65
MalI	GATC	2 cut(s)	1251, 1337
MboI	GATC	2 cut(s)	1249, 1335
MhlI	GDGCHC	5 cut(s)	342, 694, 1241, 1331, 1396
MlsI	TGGCCA	3 cut(s)	449, 828, 843
MluCI	AATT	7 cut(s)	171, 443, 501, 709, 1160, 1266, 1314
MluNI	TGGCCA	3 cut(s)	449, 828, 843
MlyI	GAGTC	4 cut(s)	140, 211, 545, 842
Mox20I	TGGCCA	3 cut(s)	449, 828, 843
Mph1103I	ATGCAT	1 cut(s)	265
MroXI	GAANNNNTTC	2 cut(s)	314, 1011
MscI	TGGCCA	3 cut(s)	449, 828, 843
MseI	TTAA	7 cut(s)	267, 473, 636, 926, 963, 1164, 1317
Msp20I	TGGCCA	3 cut(s)	449, 828, 843
MspCI	CTTAAG	2 cut(s)	635, 962
MspI	CCGG	6 cut(s)	13, 273, 371, 611, 884, 1241
MspR9I	CCNGG	8 cut(s)	63, 273, 611, 612, 884, 1111, 1241, 1242
Mva1269I	GAATGC	1 cut(s)	826
MvaI	CCWGG	2 cut(s)	63, 1111
MwoI	GCNNNNNNNGC	3 cut(s)	277, 638, 1236
NciI	CCSGG	6 cut(s)	273, 611, 612, 884, 1241, 1242
NcoI	CCATGG	2 cut(s)	453, 594
NdeII	GATC	2 cut(s)	1249, 1335
NlaIII	CATG	8 cut(s)	97, 196, 237, 386, 457, 598, 833, 856
NlaIV	GGNNCC	1 cut(s)	225
NmuCI	GTSAC	1 cut(s)	65
NsiI	ATGCAT	1 cut(s)	265
NspI	RCATGY	2 cut(s)	97, 237
PagI	TCATGA	1 cut(s)	382
PciI	ACATGT	2 cut(s)	93, 233
PciSI	GCTCTTC	1 cut(s)	330
PctI	GAATGC	1 cut(s)	826
PdmI	GAANNNNTTC	2 cut(s)	314, 1011
PfeI	GAWTC	2 cut(s)	1133, 1380
PflFI	GACNNNGTC	1 cut(s)	535
PflMI	CCANNNNNTGG	1 cut(s)	855
PinAI	ACCGGT	1 cut(s)	12
PkrI	GCNGC	1 cut(s)	367
PleI	GAGTC	4 cut(s)	140, 210, 544, 841
PmaCI	CACGTG	1 cut(s)	1403
PmlI	CACGTG	1 cut(s)	1403
PpsI	GAGTC	4 cut(s)	140, 210, 544, 841
Ppu21I	YACGTR	1 cut(s)	1403
PscI	ACATGT	2 cut(s)	93, 233
PshBI	ATTAAT	1 cut(s)	1317
Psp6I	CCWGG	2 cut(s)	61, 1109
PspCI	CACGTG	1 cut(s)	1403
PspGI	CCWGG	2 cut(s)	61, 1109
PspN4I	GGNNCC	1 cut(s)	225
PspPI	GGNCC	2 cut(s)	99, 223
PstNI	CAGNNNCTG	1 cut(s)	533
PsyI	GACNNNGTC	1 cut(s)	535
RsaI	GTAC	4 cut(s)	50, 220, 401, 815
RsaNI	GTAC	4 cut(s)	49, 219, 400, 814
SapI	GCTCTTC	1 cut(s)	330
SaqAI	TTAA	7 cut(s)	267, 473, 636, 926, 963, 1164, 1317
SatI	GCNGC	1 cut(s)	366
Sau3AI	GATC	2 cut(s)	1249, 1335
Sau96I	GGNCC	2 cut(s)	99, 223
SchI	GAGTC	4 cut(s)	140, 211, 545, 842
ScrFI	CCNGG	8 cut(s)	63, 273, 611, 612, 884, 1111, 1241, 1242
SduI	GDGCHC	5 cut(s)	342, 694, 1241, 1331, 1396
SexAI	ACCWGGT	1 cut(s)	61
SfaNI	GCATC	1 cut(s)	250
SinI	GGWCC	2 cut(s)	99, 223
SmaI	CCCGGG	2 cut(s)	612, 1242
SmlI	CTYRAG	2 cut(s)	635, 962
SmoI	CTYRAG	2 cut(s)	635, 962
Sse9I	AATT	7 cut(s)	171, 443, 501, 709, 1160, 1266, 1314
SspMI	CTAG	4 cut(s)	554, 672, 1173, 1353
StyD4I	CCNGG	8 cut(s)	61, 271, 609, 610, 882, 1109, 1239, 1240
StyI	CCWWGG	4 cut(s)	33, 453, 594, 1352
TaaI	ACNGT	4 cut(s)	53, 223, 292, 865
TaiI	ACGT	2 cut(s)	1399, 1405
TaqI	TCGA	3 cut(s)	144, 973, 1045
TasI	AATT	7 cut(s)	171, 443, 501, 709, 1160, 1266, 1314
TatI	WGTACW	2 cut(s)	399, 813
TfiI	GAWTC	2 cut(s)	1133, 1380
Tru1I	TTAA	7 cut(s)	267, 473, 636, 926, 963, 1164, 1317
Tru9I	TTAA	7 cut(s)	267, 473, 636, 926, 963, 1164, 1317
TscAI	CASTG	2 cut(s)	1133, 1331
TseFI	GTSAC	1 cut(s)	65
TseI	GCWGC	1 cut(s)	365
Tsp45I	GTSAC	1 cut(s)	65
TspDTI	ATGAA	8 cut(s)	17, 39, 130, 181, 399, 502, 801, 1020
TspMI	CCCGGG	2 cut(s)	610, 1240
TspRI	CASTG	2 cut(s)	1133, 1331
Tth111I	GACNNNGTC	1 cut(s)	535
Van91I	CCANNNNNTGG	1 cut(s)	855
Vha464I	CTTAAG	2 cut(s)	635, 962
VneI	GTGCAC	1 cut(s)	1392
VpaK11BI	GGWCC	2 cut(s)	99, 223
VspI	ATTAAT	1 cut(s)	1317
XagI	CCTNNNNNAGG	1 cut(s)	1114
XapI	RAATTY	1 cut(s)	1160
XbaI	TCTAGA	2 cut(s)	553, 1172
XceI	RCATGY	2 cut(s)	97, 237
XcmI	CCANNNNNNNNNTGG	3 cut(s)	701, 836, 1292
XmaI	CCCGGG	2 cut(s)	610, 1240
XmaJI	CCTAGG	1 cut(s)	1352
XmnI	GAANNNNTTC	2 cut(s)	314, 1011
XspI	CTAG	4 cut(s)	554, 672, 1173, 1353
Zsp2I	ATGCAT	1 cut(s)	265

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.