FvH4_5g21590

Ent-kaurenoic acid oxidase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
13026219 .. 13030570
4352 bp
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UTR
Exon/CDS
Intron
FvH4_5g21590.t1

Sequence Viewer

Length: 1593 bp
ATGGACGATCTGGGCTTCTGGTGTTTGGTTTTCACAGCTTCAGTTGGTGGCTTTGGTTTTCTAGTTTTGATCCTAAAGAGAGCAAATGAGTGGTACTTAGTGAGCAGCTTGGGTAAAATCCAGTCTAGTGTGCCTCCAGGTGATTTGGGATGGCCTTTCATTGGGAATACCTTGTCCTTCCTCTATTCTCTAAAGTATGGTCATCCTGATTCATTCGTCTCCAACTATGTTAAAAGATATGGGCAGAAAGGAATTTGCAAGGCCTATTTGTTTGGAAAGCCAACCATCATTGCTACAGCACCTGAAATATGTAGAAAGATTTTAACTGATGATACACAATTCAAGCCTGGCTGGCCAAAATCCACTACAAAACTATTGGGAAGGTTAGCTTTTATGGGCAGTTCTGCAGAGGAACACAAGCGCCTTCGCAAGCTGACCGCGGCTCCTATCAGTGGTCACAAGGCACTGTCTATGTACCATGAATACATCAAGGATGTTGTGGTAACTTCATTGGATGAATGGTCTAAGTCTGAGGAACCAATTGAGTTCTTGACTGAGATCAGGAAGTTAACTTTCAAAATAGTCATGCACATTTTTCTAAGCTCTGAGATTGGTCCCATGTTGGAGACCTTAGAAAAAGAGTATACTGCTCTTAATCATGGACTAAGATCCATGGCCATTAACCTTCCTGGCTTTGCTTATCATAATGCACTCAAGTTCGACACCATAAGAGTCTTGCAAACTAAAGCTCGGAAAAGGTTGGTTAAGACTCTTCAAGTGATTGTTGATCGAAGAAGGGAAAGAAAGGAGAGTAGTCTATCAGGGGAAAAAAGAGATTTGCTGGATTTATTACTGGAAGCCGAAGATGAGACTGGTAGAAAACTATATGATGAGGAGATCATAGACATAATCCTCATGTACTTAAATGCTGGTCATGAATCTTCAGCCCATGCCACAATGTGGGCAACTCTCTTTTTACATCAAAATCCAGAATTCTACCAAAAAGCCAAGTTGCTATTCTTCCTTCCAGTTGTGAACCGCAGTTGTCTTTCAGAATTTATCGACGAGACTTTGTTCAGTGTTGATGCAGAGCAAGAGGAGATTCTTAAAAGTCTATCACCAGAAAATGGATTGAGCTTCAAAGAGACTAAACAGATGGAATATCTTTCTAAGGTAATTGATGAAACAATGCGCGTGGTTAATATCTCGCTGTATACTTACCGGGAGGCTACTGCTGATGTTAACATCTCTGGTTACACAATACCAAAGGGATGGAAAGTGATGATGTGGTTCAGAGGAATTCATTTGAACCCAGAAATCTATCAAGATCCAAAGGAGTTCAATCCCTCAAGATGGAATGAAAGTAAAGTGAAGGCAGGGACTTACATTCCCTTTGGAATAGGAAGTAGGCAATGCCCTGGAAGTGATTTGACCAAGCTTGAAATTACTACATTTCTTCACTATTTTCTCCTGAATTATGAGCTGGAACGACTTAATCCGGGATGTGAATTGAGGTACTTACCTCATACAAGACCCGAAGACAATTGTCTTGCAAATATTAAGAAGCTTCCATCAACATCTTCATCTATATAA

Protein Analysis

531

Amino Acids

60.69

Weight (kDa)

7.99

Isoelectric Point (pI)

45.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 45 - 336 2.1e-25 Cytochrome P450
p450 PF00067 365 - 497 2.2e-37 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 960, 1127
AccI GTMKAC 2 cut(s) 644, 1214
AccII CGCG 2 cut(s) 440, 1194
AciI CCGC 3 cut(s) 438, 440, 1039
AclWI GGATC 3 cut(s) 64, 663, 1322
AcoI YGGCCR 2 cut(s) 353, 675
AcsI RAATTY 4 cut(s) 252, 992, 1055, 1299
AcuI CTGAAG 2 cut(s) 24, 927
AdeI CACNNNGTG 1 cut(s) 960
AfaI GTAC 4 cut(s) 95, 476, 920, 1517
AfiI CCNNNNNNNGG 5 cut(s) 161, 452, 960, 1127, 1353
AgsI TTSAA 7 cut(s) 343, 577, 776, 1141, 1309, 1342, 1442
AjnI CCWGG 4 cut(s) 136, 346, 688, 1417
AjuI GAANNNNNNNTTGG 2 cut(s) 1001, 1033
Alw26I GTCTC 5 cut(s) 223, 620, 863, 1061, 1139
AlwI GGATC 3 cut(s) 64, 663, 1322
AlwNI CAGNNNCTG 1 cut(s) 302
AoxI GGCC 4 cut(s) 152, 261, 353, 675
ApeKI GCWGC 1 cut(s) 105
ApoI RAATTY 4 cut(s) 252, 992, 1055, 1299
AspLEI GCGC 2 cut(s) 423, 1194
AspS9I GGNCC 1 cut(s) 614
AsuC2I CCSGG 2 cut(s) 1223, 1500
AsuHPI GGTGA 2 cut(s) 152, 1110
AvaII GGWCC 1 cut(s) 614
BalI TGGCCA 2 cut(s) 355, 677
BbsI GAAGAC 1 cut(s) 1545
BbvI GCAGC 1 cut(s) 117
BccI CCATC 6 cut(s) 144, 293, 1150, 1266, 1347, 1579
BciT130I CCWGG 4 cut(s) 138, 348, 690, 1419
BcnI CCSGG 2 cut(s) 1223, 1500
BcoDI GTCTC 5 cut(s) 223, 620, 863, 1061, 1139
BfaI CTAG 2 cut(s) 62, 126
BfmI CTRYAG 2 cut(s) 294, 405
BfoI RGCGCY 1 cut(s) 424
BglI GCCNNNNNGGC 1 cut(s) 352
BisI GCNGC 2 cut(s) 106, 441
BlsI GCNGC 2 cut(s) 107, 442
Bme1390I CCNGG 6 cut(s) 138, 348, 690, 1223, 1419, 1500
Bme18I GGWCC 1 cut(s) 614
BmgT120I GGNCC 1 cut(s) 614
BmiI GGNNCC 3 cut(s) 444, 537, 616
BmrFI CCNGG 6 cut(s) 138, 348, 690, 1223, 1419, 1500
BmsI GCATC 1 cut(s) 1075
BoxI GACNNNNGTC 1 cut(s) 1545
BpiI GAAGAC 1 cut(s) 1545
BpmI CTGGAG 1 cut(s) 120
BpuEI CTTGAG 2 cut(s) 698, 1333
BpuMI CCSGG 2 cut(s) 1223, 1500
BsaI GGTCTC 1 cut(s) 620
BsaJI CCNNGG 3 cut(s) 438, 672, 1417
BsaXI ACNNNNNCTCC 2 cut(s) 427, 457
Bsc4I CCNNNNNNNGG 5 cut(s) 161, 452, 960, 1127, 1353
Bse1I ACTGG 4 cut(s) 121, 858, 877, 1028
Bse3DI GCAATG 2 cut(s) 288, 1418
BseBI CCWGG 4 cut(s) 138, 348, 690, 1419
BseDI CCNNGG 3 cut(s) 438, 672, 1417
BseGI GGATG 6 cut(s) 155, 202, 499, 520, 1277, 1508
BseLI CCNNNNNNNGG 5 cut(s) 161, 452, 960, 1127, 1353
BseMI GCAATG 2 cut(s) 288, 1418
BseMII CTCAG 3 cut(s) 522, 546, 597
BseNI ACTGG 4 cut(s) 121, 858, 877, 1028
BseRI GAGGAG 2 cut(s) 908, 1112
BseXI GCAGC 1 cut(s) 117
Bsh1236I CGCG 2 cut(s) 440, 1194
BshFI GGCC 4 cut(s) 154, 263, 355, 677
BsiSI CCGG 2 cut(s) 1222, 1499
BslFI GGGAC 2 cut(s) 600, 1393
BslI CCNNNNNNNGG 5 cut(s) 161, 452, 960, 1127, 1353
BsmAI GTCTC 5 cut(s) 223, 620, 863, 1061, 1139
BsmBI CGTCTC 1 cut(s) 223
BsmFI GGGAC 2 cut(s) 600, 1393
BsnI GGCC 4 cut(s) 154, 263, 355, 677
Bso31I GGTCTC 1 cut(s) 620
Bsp143I GATC 7 cut(s) 7, 69, 558, 668, 787, 897, 1327
Bsp19I CCATGG 1 cut(s) 672
BspACI CCGC 3 cut(s) 438, 440, 1039
BspANI GGCC 4 cut(s) 154, 263, 355, 677
BspCNI CTCAG 3 cut(s) 523, 547, 598
BspFNI CGCG 2 cut(s) 440, 1194
BspHI TCATGA 1 cut(s) 934
BspLI GGNNCC 3 cut(s) 444, 537, 616
BspMAI CTGCAG 1 cut(s) 409
BspPI GGATC 3 cut(s) 64, 663, 1322
BspTNI GGTCTC 1 cut(s) 620
BsrDI GCAATG 2 cut(s) 288, 1418
BsrI ACTGG 4 cut(s) 121, 858, 877, 1028
BssECI CCNNGG 3 cut(s) 438, 672, 1417
BssMI GATC 7 cut(s) 7, 69, 558, 668, 787, 897, 1327
BssNAI GTATAC 2 cut(s) 645, 1215
BssT1I CCWWGG 1 cut(s) 672
Bst1107I GTATAC 2 cut(s) 645, 1215
Bst2UI CCWGG 4 cut(s) 138, 348, 690, 1419
Bst4CI ACNGT 1 cut(s) 468
Bst6I CTCTTC 1 cut(s) 777
BstC8I GCNNGC 2 cut(s) 353, 431
BstDEI CTNAG 9 cut(s) 97, 525, 531, 555, 599, 606, 631, 665, 1170
BstDSI CCRYGG 2 cut(s) 438, 672
BstF5I GGATG 6 cut(s) 155, 202, 499, 520, 1277, 1508
BstFNI CGCG 2 cut(s) 440, 1194
BstH2I RGCGCY 1 cut(s) 424
BstHHI GCGC 2 cut(s) 423, 1194
BstKTI GATC 7 cut(s) 10, 72, 561, 671, 790, 900, 1330
BstMAI GTCTC 5 cut(s) 223, 620, 863, 1061, 1139
BstMBI GATC 7 cut(s) 7, 69, 558, 668, 787, 897, 1327
BstMWI GCNNNNNNNGC 1 cut(s) 352
BstNI CCWGG 4 cut(s) 138, 348, 690, 1419
BstPAI GACNNNNGTC 1 cut(s) 1545
BstSCI CCNGG 6 cut(s) 136, 346, 688, 1221, 1417, 1498
BstSFI CTRYAG 2 cut(s) 294, 405
BstUI CGCG 2 cut(s) 440, 1194
BstV1I GCAGC 1 cut(s) 117
BstV2I GAAGAC 1 cut(s) 1545
BstX2I RGATCY 2 cut(s) 668, 1327
BstXI CCANNNNNNTGG 1 cut(s) 1272
BstYI RGATCY 2 cut(s) 668, 1327
BstZ17I GTATAC 2 cut(s) 645, 1215
BsuRI GGCC 4 cut(s) 154, 263, 355, 677
BtgI CCRYGG 2 cut(s) 438, 672
BtsCI GGATG 6 cut(s) 155, 202, 499, 520, 1277, 1508
BtsIMutI CAGTG 3 cut(s) 457, 464, 1084
Cac8I GCNNGC 2 cut(s) 353, 431
CaiI CAGNNNCTG 1 cut(s) 302
CciI TCATGA 1 cut(s) 934
CfoI GCGC 2 cut(s) 423, 1194
Cfr13I GGNCC 1 cut(s) 614
Cfr42I CCGCGG 1 cut(s) 441
Csp6I GTAC 4 cut(s) 94, 475, 919, 1516
CspCI CAANNNNNGTGG 2 cut(s) 1176, 1211
CviAII CATG 8 cut(s) 479, 586, 619, 659, 673, 916, 935, 950
CviQI GTAC 4 cut(s) 94, 475, 919, 1516
DdeI CTNAG 9 cut(s) 97, 525, 531, 555, 599, 606, 631, 665, 1170
DpnI GATC 7 cut(s) 9, 71, 560, 670, 789, 899, 1329
DpnII GATC 7 cut(s) 7, 69, 558, 668, 787, 897, 1327
DraIII CACNNNGTG 1 cut(s) 960
EaeI YGGCCR 2 cut(s) 353, 675
Eam1104I CTCTTC 1 cut(s) 777
EarI CTCTTC 1 cut(s) 777
Eco130I CCWWGG 1 cut(s) 672
Eco147I AGGCCT 1 cut(s) 263
Eco31I GGTCTC 1 cut(s) 620
Eco47I GGWCC 1 cut(s) 614
Eco57I CTGAAG 2 cut(s) 24, 927
EcoRI GAATTC 2 cut(s) 992, 1299
EcoRII CCWGG 4 cut(s) 136, 346, 688, 1417
EcoT14I CCWWGG 1 cut(s) 672
ErhI CCWWGG 1 cut(s) 672
Esp3I CGTCTC 1 cut(s) 223
FaeI CATG 8 cut(s) 482, 589, 622, 662, 676, 919, 938, 953
FalI AAGNNNNNCTT 2 cut(s) 373, 405
FaqI GGGAC 2 cut(s) 600, 1393
FatI CATG 8 cut(s) 478, 585, 618, 658, 672, 915, 934, 949
FblI GTMKAC 2 cut(s) 644, 1214
Fnu4HI GCNGC 2 cut(s) 106, 441
FokI GGATG 6 cut(s) 162, 189, 506, 527, 1284, 1515
Fsp4HI GCNGC 2 cut(s) 106, 441
FspBI CTAG 2 cut(s) 62, 126
GlaI GCGC 2 cut(s) 422, 1193
GluI GCNGC 2 cut(s) 106, 441
GsuI CTGGAG 1 cut(s) 120
HaeII RGCGCY 1 cut(s) 424
HaeIII GGCC 4 cut(s) 154, 263, 355, 677
HapII CCGG 2 cut(s) 1222, 1499
HhaI GCGC 2 cut(s) 423, 1194
Hin1II CATG 8 cut(s) 482, 589, 622, 662, 676, 919, 938, 953
Hin6I GCGC 2 cut(s) 421, 1192
HinP1I GCGC 2 cut(s) 421, 1192
HincII GTYRAC 2 cut(s) 570, 1243
HindII GTYRAC 2 cut(s) 570, 1243
HindIII AAGCTT 2 cut(s) 1436, 1565
HinfI GANTC 5 cut(s) 209, 732, 769, 938, 1102
HpaI GTTAAC 2 cut(s) 570, 1243
HpaII CCGG 2 cut(s) 1222, 1499
HphI GGTGA 2 cut(s) 152, 1110
Hpy166II GTNNAC 5 cut(s) 570, 645, 1036, 1215, 1243
Hpy188I TCNGA 5 cut(s) 532, 607, 753, 1054, 1295
Hpy188III TCNNGA 8 cut(s) 206, 550, 562, 935, 989, 1325, 1350, 1471
Hpy8I GTNNAC 5 cut(s) 570, 645, 1036, 1215, 1243
Hpy99I CGWCG 1 cut(s) 1067
HpyAV CCTTC 7 cut(s) 187, 375, 434, 695, 789, 1034, 1366
HpyCH4III ACNGT 1 cut(s) 468
HpyCH4V TGCA 7 cut(s) 258, 407, 589, 710, 739, 1088, 1553
HpyF10VI GCNNNNNNNGC 1 cut(s) 352
HpyF3I CTNAG 9 cut(s) 97, 525, 531, 555, 599, 606, 631, 665, 1170
Hsp92II CATG 8 cut(s) 482, 589, 622, 662, 676, 919, 938, 953
HspAI GCGC 2 cut(s) 421, 1192
KspAI GTTAAC 2 cut(s) 570, 1243
KspI CCGCGG 1 cut(s) 441
Kzo9I GATC 7 cut(s) 7, 69, 558, 668, 787, 897, 1327
LmnI GCTCC 1 cut(s) 448
Lsp1109I GCAGC 1 cut(s) 117
LweI GCATC 1 cut(s) 1075
MaeI CTAG 2 cut(s) 62, 126
MaeIII GTNAC 3 cut(s) 455, 502, 1253
MalI GATC 7 cut(s) 9, 71, 560, 670, 789, 899, 1329
MboI GATC 7 cut(s) 7, 69, 558, 668, 787, 897, 1327
MboII GAAGA 8 cut(s) 764, 804, 875, 933, 1012, 1448, 1550, 1572
MfeI CAATTG 2 cut(s) 540, 1543
MflI RGATCY 2 cut(s) 668, 1327
MlsI TGGCCA 2 cut(s) 355, 677
MluNI TGGCCA 2 cut(s) 355, 677
MlyI GAGTC 2 cut(s) 741, 763
MmeI TCCRAC 2 cut(s) 246, 603
Mox20I TGGCCA 2 cut(s) 355, 677
MscI TGGCCA 2 cut(s) 355, 677
Msp20I TGGCCA 2 cut(s) 355, 677
MspA1I CMGCKG 1 cut(s) 440
MspI CCGG 2 cut(s) 1222, 1499
MspR9I CCNGG 6 cut(s) 138, 348, 690, 1223, 1419, 1500
MunI CAATTG 2 cut(s) 540, 1543
MvaI CCWGG 4 cut(s) 138, 348, 690, 1419
MvnI CGCG 2 cut(s) 440, 1194
MwoI GCNNNNNNNGC 1 cut(s) 352
NciI CCSGG 2 cut(s) 1223, 1500
NcoI CCATGG 1 cut(s) 672
NdeII GATC 7 cut(s) 7, 69, 558, 668, 787, 897, 1327
NlaIII CATG 8 cut(s) 482, 589, 622, 662, 676, 919, 938, 953
NlaIV GGNNCC 3 cut(s) 444, 537, 616
NmuCI GTSAC 1 cut(s) 455
PagI TCATGA 1 cut(s) 934
PceI AGGCCT 1 cut(s) 263
PfeI GAWTC 3 cut(s) 209, 938, 1102
PflMI CCANNNNNTGG 2 cut(s) 960, 1127
PfoI TCCNGGA 1 cut(s) 1498
PkrI GCNGC 2 cut(s) 107, 442
PleI GAGTC 2 cut(s) 740, 763
PpsI GAGTC 2 cut(s) 740, 763
PshAI GACNNNNGTC 1 cut(s) 1545
Psp6I CCWGG 4 cut(s) 136, 346, 688, 1417
PspGI CCWGG 4 cut(s) 136, 346, 688, 1417
PspN4I GGNNCC 3 cut(s) 444, 537, 616
PspPI GGNCC 1 cut(s) 614
PstI CTGCAG 1 cut(s) 409
PstNI CAGNNNCTG 1 cut(s) 302
PsuI RGATCY 2 cut(s) 668, 1327
RsaI GTAC 4 cut(s) 95, 476, 920, 1517
RsaNI GTAC 4 cut(s) 94, 475, 919, 1516
SacII CCGCGG 1 cut(s) 441
SatI GCNGC 2 cut(s) 106, 441
Sau3AI GATC 7 cut(s) 7, 69, 558, 668, 787, 897, 1327
Sau96I GGNCC 1 cut(s) 614
SchI GAGTC 2 cut(s) 741, 763
ScrFI CCNGG 6 cut(s) 138, 348, 690, 1223, 1419, 1500
SfaNI GCATC 1 cut(s) 1075
SfcI CTRYAG 2 cut(s) 294, 405
Sfr303I CCGCGG 1 cut(s) 441
SgrBI CCGCGG 1 cut(s) 441
SinI GGWCC 1 cut(s) 614
SmlI CTYRAG 2 cut(s) 713, 1348
SmoI CTYRAG 2 cut(s) 713, 1348
SseBI AGGCCT 1 cut(s) 263
SsiI CCGC 3 cut(s) 438, 440, 1039
SspI AATATT 1 cut(s) 1558
SspMI CTAG 2 cut(s) 62, 126
StuI AGGCCT 1 cut(s) 263
StyD4I CCNGG 6 cut(s) 136, 346, 688, 1221, 1417, 1498
StyI CCWWGG 1 cut(s) 672
TaaI ACNGT 1 cut(s) 468
TaqI TCGA 3 cut(s) 720, 790, 1062
TatI WGTACW 1 cut(s) 918
TauI GCSGC 1 cut(s) 443
TfiI GAWTC 3 cut(s) 209, 938, 1102
TscAI CASTG 3 cut(s) 457, 471, 1084
TseFI GTSAC 1 cut(s) 455
TseI GCWGC 1 cut(s) 105
Tsp45I GTSAC 1 cut(s) 455
TspRI CASTG 3 cut(s) 457, 471, 1084
Van91I CCANNNNNTGG 2 cut(s) 960, 1127
VpaK11BI GGWCC 1 cut(s) 614
XapI RAATTY 4 cut(s) 252, 992, 1055, 1299
XmiI GTMKAC 2 cut(s) 644, 1214
XspI CTAG 2 cut(s) 62, 126
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.