FvH4_5g21600

Ent-kaurenoic acid oxidase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
13035923 .. 13038773
2851 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g21600.t1

Sequence Viewer

Length: 1338 bp
ATGGACGAGTTGGGTTTCTGGTGTCTGGTTTTCACAGCTTCAGTTGGTGGCTTTGGTGTTCTAGTTTTGGTCCTAAAGAGAGCAAATGAGTGGTACTTTGTGAGCAGCTTGGGTGAAAACCAGTCTAGTCTGCCTCCAGGTGATATGGGATGGCCTTTCATTGGGAATACCTTGTCCTTCCTCTATTCTCTGAAATATTCTAGATCTTCGCATAGTTTCTTACATGCTAACTTTTCTATTGCATGGTACACCAGATATGGTCAGAAAGGAATTTCCAAGGCCTATTTGTTTGGAAAGCCAACTATCATAGCTACGGAACCTGAAATATGTAGAAAGATCTTAACAAATGATACCCAATTCAAGGCTGGCTGGCCAAAATCCATTACAGAACTATTATTAGGAAAGTTAGCATTGATGGACAATTCTGCAGAGGATCACAAGCGCCTTCGCAAGCTGACCGCGGCTCCAATCAGTGGTCACAAGGCACTGTCTATGTACCATGAATACATCAAGGATGTCGTAGTAACTTCATTGGATGAATGGTCCAAATCTGAGGAACCAATTGAGTTCTTGACTGAGATCAGGAAGTTAACTTTCAAAATAGTCACGCACATTTTTCTGAGCTCTGAGGTTGGTCCCATGTTGGAGACCTTAGAAAAAGATTATACCACTCTCAATCATGGACTAAGATCCATGGCCATTAACCTTCCTGGCTTTGCTTATCATAATGCACTCAAGGCTCGGAAAAGGTTGGTAAAGACTCTTCAAGTGATTGTTGATCGAAGAAGGGAAAGAAAGGAGGGTAGTCTATCAAGGGAAAGAAGAGATTTGCTGGATTTATTACTGGAAGCCGAAGATGAGACTGGTAGAAAACTATATGATGAGGAGATCATAGACATAATCCTCATGTACTTAAATGCTGGTCATGAATCTTCAGCCCATGCCACAATGTGGGCAACTCTCTTTTTACATCAAAATCCAGAATTCTACCAAAAAGCCAAGGTGGTAGCAATGCTTGGTGAAAAGGTAATTGATGAAACAATGCGCGTGGTTAATATCTCGCTGTATACTTACCGGGAGGCTACAGCTGATGTTAACATCTCTGGTTACACAATACCAAAGGGATGGAAAGTGATGATATGGTTCAGAGGAATACATTTGAACCCAGAAATTTATCAAGATCCAAATGAGTTCAATCCCTCAAGATGGAACGAAAGTAAAGTGAAGGCAGGGACTTACATTCCCTTTGGAATAGGAAGTAGGCAATGCCCTGGAAGTGATTTGACCAAGCTTGAAATTACTACATTTCTTCACTACTTTCTCCTGAATTATGAGTAA

Protein Analysis

446

Amino Acids

51.01

Weight (kDa)

7.72

Isoelectric Point (pI)

38.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 45 - 333 9.4e-21 Cytochrome P450
p450 PF00067 341 - 445 1.1e-30 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 473, 951
AccI GTMKAC 1 cut(s) 1067
AccII CGCG 2 cut(s) 461, 1047
AciI CCGC 2 cut(s) 459, 461
AclWI GGATC 3 cut(s) 441, 684, 1175
AcoI YGGCCR 2 cut(s) 371, 696
AcsI RAATTY 3 cut(s) 270, 983, 1170
AcuI CTGAAG 2 cut(s) 24, 918
AdeI CACNNNGTG 1 cut(s) 951
AfaI GTAC 4 cut(s) 95, 248, 497, 911
AfiI CCNNNNNNNGG 5 cut(s) 161, 361, 473, 951, 1206
AgsI TTSAA 6 cut(s) 361, 598, 767, 1162, 1195, 1295
AjnI CCWGG 3 cut(s) 136, 709, 1270
AluBI AGCT 7 cut(s) 38, 108, 311, 454, 624, 1088, 1291
AluI AGCT 7 cut(s) 38, 108, 311, 454, 624, 1088, 1291
Alw21I GWGCWC 1 cut(s) 626
Alw26I GTCTC 2 cut(s) 641, 854
AlwI GGATC 3 cut(s) 441, 684, 1175
AoxI GGCC 4 cut(s) 152, 279, 371, 696
ApeKI GCWGC 1 cut(s) 105
ApoI RAATTY 3 cut(s) 270, 983, 1170
AspLEI GCGC 2 cut(s) 444, 1047
AspS9I GGNCC 3 cut(s) 70, 543, 635
AsuC2I CCSGG 1 cut(s) 1076
AsuHPI GGTGA 3 cut(s) 125, 152, 1031
AvaII GGWCC 3 cut(s) 70, 543, 635
BalI TGGCCA 2 cut(s) 373, 698
BanII GRGCYC 1 cut(s) 626
BarI GAAGNNNNNNTAC 2 cut(s) 747, 779
Bbv12I GWGCWC 1 cut(s) 626
BbvI GCAGC 1 cut(s) 117
BccI CCATC 4 cut(s) 144, 409, 1119, 1200
BciT130I CCWGG 3 cut(s) 138, 711, 1272
BcnI CCSGG 1 cut(s) 1076
BcoDI GTCTC 2 cut(s) 641, 854
BfaI CTAG 3 cut(s) 62, 126, 201
BfmI CTRYAG 2 cut(s) 426, 1083
BfoI RGCGCY 1 cut(s) 445
BglII AGATCT 2 cut(s) 203, 336
BisI GCNGC 2 cut(s) 106, 462
BlsI GCNGC 2 cut(s) 107, 463
Bme1390I CCNGG 4 cut(s) 138, 711, 1076, 1272
Bme18I GGWCC 3 cut(s) 70, 543, 635
BmgT120I GGNCC 3 cut(s) 70, 543, 635
BmiI GGNNCC 4 cut(s) 318, 465, 558, 637
BmrFI CCNGG 4 cut(s) 138, 711, 1076, 1272
BpmI CTGGAG 1 cut(s) 120
BpuEI CTTGAG 2 cut(s) 719, 1186
BpuMI CCSGG 1 cut(s) 1076
BsaI GGTCTC 1 cut(s) 641
BsaJI CCNNGG 5 cut(s) 276, 459, 693, 999, 1270
BsaXI ACNNNNNCTCC 2 cut(s) 448, 478
Bsc4I CCNNNNNNNGG 5 cut(s) 161, 361, 473, 951, 1206
Bse1I ACTGG 3 cut(s) 121, 849, 868
Bse3DI GCAATG 2 cut(s) 1017, 1271
BseBI CCWGG 3 cut(s) 138, 711, 1272
BseDI CCNNGG 5 cut(s) 276, 459, 693, 999, 1270
BseGI GGATG 4 cut(s) 155, 520, 541, 1130
BseLI CCNNNNNNNGG 5 cut(s) 161, 361, 473, 951, 1206
BseMI GCAATG 2 cut(s) 1017, 1271
BseMII CTCAG 4 cut(s) 543, 567, 611, 618
BseNI ACTGG 3 cut(s) 121, 849, 868
BseRI GAGGAG 1 cut(s) 899
BseXI GCAGC 1 cut(s) 117
Bsh1236I CGCG 2 cut(s) 461, 1047
BshFI GGCC 4 cut(s) 154, 281, 373, 698
BsiHKAI GWGCWC 1 cut(s) 626
BsiSI CCGG 1 cut(s) 1075
BslFI GGGAC 2 cut(s) 621, 1246
BslI CCNNNNNNNGG 5 cut(s) 161, 361, 473, 951, 1206
BsmAI GTCTC 2 cut(s) 641, 854
BsmFI GGGAC 2 cut(s) 621, 1246
BsnI GGCC 4 cut(s) 154, 281, 373, 698
Bso31I GGTCTC 1 cut(s) 641
Bsp1286I GDGCHC 1 cut(s) 626
Bsp143I GATC 8 cut(s) 203, 336, 433, 579, 689, 778, 888, 1180
Bsp19I CCATGG 1 cut(s) 693
BspACI CCGC 2 cut(s) 459, 461
BspANI GGCC 4 cut(s) 154, 281, 373, 698
BspCNI CTCAG 4 cut(s) 544, 568, 612, 619
BspFNI CGCG 2 cut(s) 461, 1047
BspHI TCATGA 1 cut(s) 925
BspLI GGNNCC 4 cut(s) 318, 465, 558, 637
BspMAI CTGCAG 1 cut(s) 430
BspPI GGATC 3 cut(s) 441, 684, 1175
BspTNI GGTCTC 1 cut(s) 641
BsrDI GCAATG 2 cut(s) 1017, 1271
BsrI ACTGG 3 cut(s) 121, 849, 868
BssECI CCNNGG 5 cut(s) 276, 459, 693, 999, 1270
BssMI GATC 8 cut(s) 203, 336, 433, 579, 689, 778, 888, 1180
BssNAI GTATAC 1 cut(s) 1068
BssT1I CCWWGG 3 cut(s) 276, 693, 999
Bst1107I GTATAC 1 cut(s) 1068
Bst2UI CCWGG 3 cut(s) 138, 711, 1272
Bst4CI ACNGT 1 cut(s) 489
Bst6I CTCTTC 2 cut(s) 768, 817
BstC8I GCNNGC 3 cut(s) 367, 371, 452
BstDEI CTNAG 6 cut(s) 552, 576, 620, 627, 652, 686
BstDSI CCRYGG 2 cut(s) 459, 693
BstF5I GGATG 4 cut(s) 155, 520, 541, 1130
BstFNI CGCG 2 cut(s) 461, 1047
BstH2I RGCGCY 1 cut(s) 445
BstHHI GCGC 2 cut(s) 444, 1047
BstKTI GATC 8 cut(s) 206, 339, 436, 582, 692, 781, 891, 1183
BstMAI GTCTC 2 cut(s) 641, 854
BstMBI GATC 8 cut(s) 203, 336, 433, 579, 689, 778, 888, 1180
BstMWI GCNNNNNNNGC 1 cut(s) 737
BstNI CCWGG 3 cut(s) 138, 711, 1272
BstNSI RCATGY 1 cut(s) 227
BstSCI CCNGG 4 cut(s) 136, 709, 1074, 1270
BstSFI CTRYAG 2 cut(s) 426, 1083
BstUI CGCG 2 cut(s) 461, 1047
BstV1I GCAGC 1 cut(s) 117
BstX2I RGATCY 4 cut(s) 203, 336, 689, 1180
BstXI CCANNNNNNTGG 1 cut(s) 1125
BstYI RGATCY 4 cut(s) 203, 336, 689, 1180
BstZ17I GTATAC 1 cut(s) 1068
BsuRI GGCC 4 cut(s) 154, 281, 373, 698
BtgI CCRYGG 2 cut(s) 459, 693
BtsCI GGATG 4 cut(s) 155, 520, 541, 1130
BtsIMutI CAGTG 2 cut(s) 478, 485
Cac8I GCNNGC 3 cut(s) 367, 371, 452
CciI TCATGA 1 cut(s) 925
CfoI GCGC 2 cut(s) 444, 1047
Cfr13I GGNCC 3 cut(s) 70, 543, 635
Cfr42I CCGCGG 1 cut(s) 462
Csp6I GTAC 4 cut(s) 94, 247, 496, 910
CspCI CAANNNNNGTGG 2 cut(s) 1029, 1064
CviAII CATG 9 cut(s) 224, 243, 500, 640, 680, 694, 907, 926, 941
CviQI GTAC 4 cut(s) 94, 247, 496, 910
DdeI CTNAG 6 cut(s) 552, 576, 620, 627, 652, 686
DpnI GATC 8 cut(s) 205, 338, 435, 581, 691, 780, 890, 1182
DpnII GATC 8 cut(s) 203, 336, 433, 579, 689, 778, 888, 1180
DraIII CACNNNGTG 1 cut(s) 951
EaeI YGGCCR 2 cut(s) 371, 696
Eam1104I CTCTTC 2 cut(s) 768, 817
EarI CTCTTC 2 cut(s) 768, 817
Ecl136II GAGCTC 1 cut(s) 624
Eco130I CCWWGG 3 cut(s) 276, 693, 999
Eco147I AGGCCT 1 cut(s) 281
Eco24I GRGCYC 1 cut(s) 626
Eco31I GGTCTC 1 cut(s) 641
Eco47I GGWCC 3 cut(s) 70, 543, 635
Eco53kI GAGCTC 1 cut(s) 624
Eco57I CTGAAG 2 cut(s) 24, 918
EcoICRI GAGCTC 1 cut(s) 624
EcoRI GAATTC 1 cut(s) 983
EcoRII CCWGG 3 cut(s) 136, 709, 1270
EcoT14I CCWWGG 3 cut(s) 276, 693, 999
EcoT38I GRGCYC 1 cut(s) 626
ErhI CCWWGG 3 cut(s) 276, 693, 999
FaeI CATG 9 cut(s) 227, 246, 503, 643, 683, 697, 910, 929, 944
FaqI GGGAC 2 cut(s) 621, 1246
FatI CATG 9 cut(s) 223, 242, 499, 639, 679, 693, 906, 925, 940
FblI GTMKAC 1 cut(s) 1067
Fnu4HI GCNGC 2 cut(s) 106, 462
FokI GGATG 4 cut(s) 162, 527, 548, 1137
FriOI GRGCYC 1 cut(s) 626
Fsp4HI GCNGC 2 cut(s) 106, 462
FspBI CTAG 3 cut(s) 62, 126, 201
GlaI GCGC 2 cut(s) 443, 1046
GluI GCNGC 2 cut(s) 106, 462
GsuI CTGGAG 1 cut(s) 120
HaeII RGCGCY 1 cut(s) 445
HaeIII GGCC 4 cut(s) 154, 281, 373, 698
HapII CCGG 1 cut(s) 1075
HhaI GCGC 2 cut(s) 444, 1047
Hin1II CATG 9 cut(s) 227, 246, 503, 643, 683, 697, 910, 929, 944
Hin6I GCGC 2 cut(s) 442, 1045
HinP1I GCGC 2 cut(s) 442, 1045
HincII GTYRAC 2 cut(s) 591, 1096
HindII GTYRAC 2 cut(s) 591, 1096
HindIII AAGCTT 1 cut(s) 1289
HinfI GANTC 2 cut(s) 760, 929
HpaI GTTAAC 2 cut(s) 591, 1096
HpaII CCGG 1 cut(s) 1075
HphI GGTGA 3 cut(s) 125, 152, 1031
Hpy166II GTNNAC 4 cut(s) 249, 591, 1068, 1096
Hpy188I TCNGA 7 cut(s) 192, 264, 553, 621, 628, 744, 1148
Hpy188III TCNNGA 8 cut(s) 201, 571, 583, 926, 980, 1178, 1203, 1324
Hpy8I GTNNAC 4 cut(s) 249, 591, 1068, 1096
HpyAV CCTTC 5 cut(s) 187, 455, 716, 780, 1219
HpyCH4III ACNGT 1 cut(s) 489
HpyCH4V TGCA 3 cut(s) 242, 428, 731
HpyF10VI GCNNNNNNNGC 1 cut(s) 737
HpyF3I CTNAG 6 cut(s) 552, 576, 620, 627, 652, 686
Hsp92II CATG 9 cut(s) 227, 246, 503, 643, 683, 697, 910, 929, 944
HspAI GCGC 2 cut(s) 442, 1045
KspAI GTTAAC 2 cut(s) 591, 1096
KspI CCGCGG 1 cut(s) 462
Kzo9I GATC 8 cut(s) 203, 336, 433, 579, 689, 778, 888, 1180
LmnI GCTCC 1 cut(s) 469
Lsp1109I GCAGC 1 cut(s) 117
MaeI CTAG 3 cut(s) 62, 126, 201
MaeIII GTNAC 4 cut(s) 476, 523, 604, 1106
MalI GATC 8 cut(s) 205, 338, 435, 581, 691, 780, 890, 1182
MboI GATC 8 cut(s) 203, 336, 433, 579, 689, 778, 888, 1180
MboII GAAGA 7 cut(s) 198, 755, 795, 834, 866, 924, 1301
MfeI CAATTG 1 cut(s) 561
MflI RGATCY 4 cut(s) 203, 336, 689, 1180
MhlI GDGCHC 1 cut(s) 626
MlsI TGGCCA 2 cut(s) 373, 698
MluCI AATT 9 cut(s) 270, 356, 421, 561, 983, 1029, 1170, 1296, 1327
MluNI TGGCCA 2 cut(s) 373, 698
MlyI GAGTC 1 cut(s) 754
MmeI TCCRAC 1 cut(s) 624
Mox20I TGGCCA 2 cut(s) 373, 698
MscI TGGCCA 2 cut(s) 373, 698
MseI TTAA 6 cut(s) 341, 590, 702, 914, 1053, 1095
Msp20I TGGCCA 2 cut(s) 373, 698
MspA1I CMGCKG 2 cut(s) 461, 1088
MspI CCGG 1 cut(s) 1075
MspR9I CCNGG 4 cut(s) 138, 711, 1076, 1272
MunI CAATTG 1 cut(s) 561
MvaI CCWGG 3 cut(s) 138, 711, 1272
MvnI CGCG 2 cut(s) 461, 1047
MwoI GCNNNNNNNGC 1 cut(s) 737
NciI CCSGG 1 cut(s) 1076
NcoI CCATGG 1 cut(s) 693
NdeII GATC 8 cut(s) 203, 336, 433, 579, 689, 778, 888, 1180
NlaIII CATG 9 cut(s) 227, 246, 503, 643, 683, 697, 910, 929, 944
NlaIV GGNNCC 4 cut(s) 318, 465, 558, 637
NmuCI GTSAC 2 cut(s) 476, 604
NspI RCATGY 1 cut(s) 227
PagI TCATGA 1 cut(s) 925
PceI AGGCCT 1 cut(s) 281
PfeI GAWTC 1 cut(s) 929
PflMI CCANNNNNTGG 2 cut(s) 473, 951
PkrI GCNGC 2 cut(s) 107, 463
PleI GAGTC 1 cut(s) 754
PpsI GAGTC 1 cut(s) 754
Psp124BI GAGCTC 1 cut(s) 626
Psp6I CCWGG 3 cut(s) 136, 709, 1270
PspGI CCWGG 3 cut(s) 136, 709, 1270
PspN4I GGNNCC 4 cut(s) 318, 465, 558, 637
PspPI GGNCC 3 cut(s) 70, 543, 635
PstI CTGCAG 1 cut(s) 430
PsuI RGATCY 4 cut(s) 203, 336, 689, 1180
PvuII CAGCTG 1 cut(s) 1088
RsaI GTAC 4 cut(s) 95, 248, 497, 911
RsaNI GTAC 4 cut(s) 94, 247, 496, 910
SacI GAGCTC 1 cut(s) 626
SacII CCGCGG 1 cut(s) 462
SaqAI TTAA 6 cut(s) 341, 590, 702, 914, 1053, 1095
SatI GCNGC 2 cut(s) 106, 462
Sau3AI GATC 8 cut(s) 203, 336, 433, 579, 689, 778, 888, 1180
Sau96I GGNCC 3 cut(s) 70, 543, 635
SchI GAGTC 1 cut(s) 754
ScrFI CCNGG 4 cut(s) 138, 711, 1076, 1272
SduI GDGCHC 1 cut(s) 626
SfcI CTRYAG 2 cut(s) 426, 1083
Sfr303I CCGCGG 1 cut(s) 462
SgrBI CCGCGG 1 cut(s) 462
SinI GGWCC 3 cut(s) 70, 543, 635
SmlI CTYRAG 2 cut(s) 734, 1201
SmoI CTYRAG 2 cut(s) 734, 1201
Sse9I AATT 9 cut(s) 270, 356, 421, 561, 983, 1029, 1170, 1296, 1327
SseBI AGGCCT 1 cut(s) 281
SsiI CCGC 2 cut(s) 459, 461
SspI AATATT 1 cut(s) 197
SspMI CTAG 3 cut(s) 62, 126, 201
SstI GAGCTC 1 cut(s) 626
StuI AGGCCT 1 cut(s) 281
StyD4I CCNGG 4 cut(s) 136, 709, 1074, 1270
StyI CCWWGG 3 cut(s) 276, 693, 999
TaaI ACNGT 1 cut(s) 489
TaqI TCGA 1 cut(s) 781
TasI AATT 9 cut(s) 270, 356, 421, 561, 983, 1029, 1170, 1296, 1327
TatI WGTACW 1 cut(s) 909
TauI GCSGC 1 cut(s) 464
TfiI GAWTC 1 cut(s) 929
Tru1I TTAA 6 cut(s) 341, 590, 702, 914, 1053, 1095
Tru9I TTAA 6 cut(s) 341, 590, 702, 914, 1053, 1095
TscAI CASTG 2 cut(s) 478, 492
TseFI GTSAC 2 cut(s) 476, 604
TseI GCWGC 1 cut(s) 105
Tsp45I GTSAC 2 cut(s) 476, 604
TspDTI ATGAA 6 cut(s) 148, 516, 519, 552, 942, 1050
TspGWI ACGGA 1 cut(s) 329
TspRI CASTG 2 cut(s) 478, 492
Van91I CCANNNNNTGG 2 cut(s) 473, 951
VpaK11BI GGWCC 3 cut(s) 70, 543, 635
XapI RAATTY 3 cut(s) 270, 983, 1170
XbaI TCTAGA 1 cut(s) 200
XceI RCATGY 1 cut(s) 227
XcmI CCANNNNNNNNNTGG 1 cut(s) 362
XmiI GTMKAC 1 cut(s) 1067
XspI CTAG 3 cut(s) 62, 126, 201
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.