Rmu_co8489367.1_g000001

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8489367.1
Physical Location & Seq
Reverse (-)
1 .. 2333
2333 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8489367.1_g000001.1.cds

Sequence Viewer

Length: 1168 bp
atgccagaaacatgtagaagagttttgacagatgatgatgcctttaagcccggttggcctgcttccaccgttgaactcattggtaagaaatcattcgtttccataccatttgaagagcacaagcgtctgagaagactaacagcagctccggtcaatggtcatgaagcattgtctatgtacataccatatattgaggagattgttatatcttctttggaaaaattggccaccatgggacagatacagtttttaactcaactcagaaagattactttcagaattattatgttcatatttcttagcacagagactgagtctgtgatggaggctctagagagggaatatacagaactgaactatggagttagagccatggcaatcaatatcccgggatttgcttaccataaggcacttaaggctcgaaaaaaccttgttgctatttttcaatgtagtgtagacgagcgcagggcccaaaagaaggctggcaatttcttcagaaagaagaaagatatgatggatgctctgctggatgttgaagacgaagatggaaggaaacttacagatgaagaagtcattgacattctgctaatgtacttgaatgctggccatgagtcttctggccataccatcatgtgggcgactgttttgctacaagaacaccaggaagtgttgcagagagccaaggcagagcaagaagagattttaaagaggaggccaccaacacagaagggactgacacttaaggaatatcgagaaatggaatatctttctaaggtgatcgatgaaactcttcggtttgtatcattctcactcgtggtgtttcgagaggcgaataaagatgtcaatataaatggttatatcattccaaagggatggaaagctttggcctggtttaggagcgttcactgggattctgaaatatatccaaatccaagagaatttaacccttctagatgggataactatacaccgaaaccagcaacttttcttcccttcggagctggaagcaggctgtgcccgggaaatgatcttgctaagctggaaattgctattttcctacaccattttcttcttggttatgaggtggagcgaattaatcctcagtgcccaatgatccacttgcctcatcctaggccaaaagacaactgcttggcaagaatcaagaaat

Protein Analysis

389

Amino Acids

45.09

Weight (kDa)

8.42

Isoelectric Point (pI)

45.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 633
AccI GTMKAC 1 cut(s) 456
AclWI GGATC 1 cut(s) 1108
AcoI YGGCCR 3 cut(s) 225, 604, 619
AcsI RAATTY 1 cut(s) 938
AcuI CTGAAG 1 cut(s) 478
AfaI GTAC 2 cut(s) 179, 593
AfiI CCNNNNNNNGG 4 cut(s) 155, 478, 633, 894
AflII CTTAAG 2 cut(s) 413, 740
AflIII ACRYGT 1 cut(s) 11
AgsI TTSAA 5 cut(s) 74, 113, 446, 536, 598
AjnI CCWGG 2 cut(s) 660, 887
AluBI AGCT 4 cut(s) 146, 881, 1001, 1039
AluI AGCT 4 cut(s) 146, 881, 1001, 1039
Alw21I GWGCWC 1 cut(s) 120
Alw26I GTCTC 1 cut(s) 302
AlwI GGATC 1 cut(s) 1108
AlwNI CAGNNNCTG 1 cut(s) 311
Ama87I CYCGRG 2 cut(s) 388, 1018
AoxI GGCC 8 cut(s) 56, 225, 468, 604, 619, 713, 885, 1133
ApaI GGGCCC 1 cut(s) 472
ApeKI GCWGC 1 cut(s) 143
ApoI RAATTY 1 cut(s) 938
AseI ATTAAT 1 cut(s) 1095
Asp700I GAANNNNTTC 2 cut(s) 92, 789
AspA2I CCTAGG 1 cut(s) 1130
AspLEI GCGC 1 cut(s) 465
AspS9I GGNCC 2 cut(s) 468, 469
AsuC2I CCSGG 5 cut(s) 51, 389, 390, 1019, 1020
AsuHPI GGTGA 1 cut(s) 787
AvaI CYCGRG 2 cut(s) 388, 1018
AvrII CCTAGG 1 cut(s) 1130
BaeGI GKGCMC 3 cut(s) 472, 1019, 1109
BalI TGGCCA 3 cut(s) 227, 606, 621
BanII GRGCYC 1 cut(s) 472
BarI GAAGNNNNNNTAC 2 cut(s) 541, 573
BauI CACGAG 1 cut(s) 812
BbsI GAAGAC 3 cut(s) 139, 543, 606
Bbv12I GWGCWC 1 cut(s) 120
BbvI GCAGC 1 cut(s) 155
BccI CCATC 6 cut(s) 316, 508, 539, 635, 867, 948
BcgI CGANNNNNNTGC 2 cut(s) 628, 662
BciT130I CCWGG 2 cut(s) 662, 889
BcnI CCSGG 5 cut(s) 51, 389, 390, 1019, 1020
BcoDI GTCTC 1 cut(s) 302
BfaI CTAG 3 cut(s) 332, 951, 1131
BfrI CTTAAG 2 cut(s) 413, 740
BglI GCCNNNNNGGC 1 cut(s) 55
BisI GCNGC 1 cut(s) 144
BlnI CCTAGG 1 cut(s) 1130
BlpI GCTNAGC 1 cut(s) 1035
BlsI GCNGC 1 cut(s) 145
Bme1390I CCNGG 7 cut(s) 51, 389, 390, 662, 889, 1019, 1020
BmeT110I CYCGRG 2 cut(s) 388, 1018
BmgT120I GGNCC 2 cut(s) 468, 469
BmiI GGNNCC 1 cut(s) 470
BmrFI CCNGG 7 cut(s) 51, 389, 390, 662, 889, 1019, 1020
BmrI ACTGGG 1 cut(s) 916
BmsI GCATC 2 cut(s) 28, 508
BmuI ACTGGG 1 cut(s) 916
BpiI GAAGAC 3 cut(s) 139, 543, 606
Bpu1102I GCTNAGC 1 cut(s) 1035
BpuMI CCSGG 5 cut(s) 51, 389, 390, 1019, 1020
Bsa29I ATCGAT 1 cut(s) 780
BsaJI CCNNGG 6 cut(s) 231, 372, 388, 681, 1018, 1130
BsaWI WCCGGW 1 cut(s) 148
BsaXI ACNNNNNCTCC 2 cut(s) 130, 160
Bsc4I CCNNNNNNNGG 4 cut(s) 155, 478, 633, 894
Bse1I ACTGG 1 cut(s) 911
BseBI CCWGG 2 cut(s) 662, 889
BseCI ATCGAT 1 cut(s) 780
BseDI CCNNGG 6 cut(s) 231, 372, 388, 681, 1018, 1130
BseGI GGATG 4 cut(s) 523, 535, 878, 1126
BseLI CCNNNNNNNGG 4 cut(s) 155, 478, 633, 894
BseMII CTCAG 4 cut(s) 119, 274, 303, 1115
BseNI ACTGG 1 cut(s) 911
BseRI GAGGAG 2 cut(s) 209, 724
BseSI GKGCMC 3 cut(s) 472, 1019, 1109
BseXI GCAGC 1 cut(s) 155
BshFI GGCC 8 cut(s) 58, 227, 470, 606, 621, 715, 887, 1135
BshVI ATCGAT 1 cut(s) 780
BsiHKAI GWGCWC 1 cut(s) 120
BsiHKCI CYCGRG 2 cut(s) 388, 1018
BsiSI CCGG 4 cut(s) 51, 149, 389, 1019
BslFI GGGAC 2 cut(s) 249, 744
BslI CCNNNNNNNGG 4 cut(s) 155, 478, 633, 894
BsmAI GTCTC 1 cut(s) 302
BsmFI GGGAC 2 cut(s) 249, 744
BsmI GAATGC 1 cut(s) 604
BsnI GGCC 8 cut(s) 58, 227, 470, 606, 621, 715, 887, 1135
BsoBI CYCGRG 2 cut(s) 388, 1018
Bsp120I GGGCCC 1 cut(s) 468
Bsp1286I GDGCHC 4 cut(s) 120, 472, 1019, 1109
Bsp1407I TGTACA 1 cut(s) 177
Bsp143I GATC 3 cut(s) 777, 1027, 1113
Bsp1720I GCTNAGC 1 cut(s) 1035
Bsp19I CCATGG 2 cut(s) 231, 372
BspANI GGCC 8 cut(s) 58, 227, 470, 606, 621, 715, 887, 1135
BspCNI CTCAG 4 cut(s) 120, 273, 304, 1114
BspDI ATCGAT 1 cut(s) 780
BspHI TCATGA 1 cut(s) 160
BspLI GGNNCC 1 cut(s) 470
BspPI GGATC 1 cut(s) 1108
BspQI GCTCTTC 1 cut(s) 108
BspTI CTTAAG 2 cut(s) 413, 740
BsrGI TGTACA 1 cut(s) 177
BsrI ACTGG 1 cut(s) 911
BssECI CCNNGG 6 cut(s) 231, 372, 388, 681, 1018, 1130
BssMI GATC 3 cut(s) 777, 1027, 1113
BssSI CACGAG 1 cut(s) 812
BssT1I CCWWGG 4 cut(s) 231, 372, 681, 1130
Bst2BI CACGAG 1 cut(s) 812
Bst2UI CCWGG 2 cut(s) 662, 889
Bst4CI ACNGT 3 cut(s) 70, 246, 643
Bst6I CTCTTC 4 cut(s) 13, 108, 690, 795
BstAFI CTTAAG 2 cut(s) 413, 740
BstAPI GCANNNNNTGC 1 cut(s) 1014
BstAUI TGTACA 1 cut(s) 177
BstC8I GCNNGC 4 cut(s) 60, 484, 604, 1010
BstDEI CTNAG 7 cut(s) 128, 260, 299, 312, 771, 1035, 1101
BstDSI CCRYGG 2 cut(s) 231, 372
BstENI CCTNNNNNAGG 1 cut(s) 892
BstF5I GGATG 4 cut(s) 523, 535, 878, 1126
BstHHI GCGC 1 cut(s) 465
BstKTI GATC 3 cut(s) 780, 1030, 1116
BstMAI GTCTC 1 cut(s) 302
BstMBI GATC 3 cut(s) 777, 1027, 1113
BstMWI GCNNNNNNNGC 3 cut(s) 55, 416, 1014
BstNI CCWGG 2 cut(s) 662, 889
BstNSI RCATGY 1 cut(s) 15
BstSCI CCNGG 7 cut(s) 49, 387, 388, 660, 887, 1017, 1018
BstSLI GKGCMC 3 cut(s) 472, 1019, 1109
BstV1I GCAGC 1 cut(s) 155
BstV2I GAAGAC 3 cut(s) 139, 543, 606
BstXI CCANNNNNNTGG 1 cut(s) 873
Bsu15I ATCGAT 1 cut(s) 780
BsuRI GGCC 8 cut(s) 58, 227, 470, 606, 621, 715, 887, 1135
BsuTUI ATCGAT 1 cut(s) 780
BtgI CCRYGG 2 cut(s) 231, 372
BtsCI GGATG 4 cut(s) 523, 535, 878, 1126
BtsIMutI CAGTG 2 cut(s) 904, 1109
Cac8I GCNNGC 4 cut(s) 60, 484, 604, 1010
CaiI CAGNNNCTG 1 cut(s) 311
CciI TCATGA 1 cut(s) 160
CfoI GCGC 1 cut(s) 465
Cfr13I GGNCC 2 cut(s) 468, 469
Cfr9I CCCGGG 2 cut(s) 388, 1018
ClaI ATCGAT 1 cut(s) 780
CseI GACGC 1 cut(s) 113
Csp6I GTAC 2 cut(s) 178, 592
CviAII CATG 6 cut(s) 12, 161, 232, 373, 608, 631
CviQI GTAC 2 cut(s) 178, 592
DdeI CTNAG 7 cut(s) 128, 260, 299, 312, 771, 1035, 1101
DpnI GATC 3 cut(s) 779, 1029, 1115
DpnII GATC 3 cut(s) 777, 1027, 1113
DraI TTTAAA 1 cut(s) 705
EaeI YGGCCR 3 cut(s) 225, 604, 619
Eam1104I CTCTTC 4 cut(s) 13, 108, 690, 795
EarI CTCTTC 4 cut(s) 13, 108, 690, 795
Eco130I CCWWGG 4 cut(s) 231, 372, 681, 1130
Eco24I GRGCYC 1 cut(s) 472
Eco57I CTGAAG 1 cut(s) 478
Eco88I CYCGRG 2 cut(s) 388, 1018
EcoNI CCTNNNNNAGG 1 cut(s) 892
EcoO109I RGGNCCY 1 cut(s) 468
EcoRII CCWGG 2 cut(s) 660, 887
EcoT14I CCWWGG 4 cut(s) 231, 372, 681, 1130
EcoT38I GRGCYC 1 cut(s) 472
ErhI CCWWGG 4 cut(s) 231, 372, 681, 1130
FaeI CATG 6 cut(s) 15, 164, 235, 376, 611, 634
FaqI GGGAC 2 cut(s) 249, 744
FatI CATG 6 cut(s) 11, 160, 231, 372, 607, 630
FblI GTMKAC 1 cut(s) 456
Fnu4HI GCNGC 1 cut(s) 144
FokI GGATG 4 cut(s) 530, 542, 885, 1113
FriOI GRGCYC 1 cut(s) 472
Fsp4HI GCNGC 1 cut(s) 144
FspBI CTAG 3 cut(s) 332, 951, 1131
GlaI GCGC 1 cut(s) 464
GluI GCNGC 1 cut(s) 144
HaeIII GGCC 8 cut(s) 58, 227, 470, 606, 621, 715, 887, 1135
HapII CCGG 4 cut(s) 51, 149, 389, 1019
HgaI GACGC 1 cut(s) 113
HhaI GCGC 1 cut(s) 465
Hin1II CATG 6 cut(s) 15, 164, 235, 376, 611, 634
Hin6I GCGC 1 cut(s) 463
HinP1I GCGC 1 cut(s) 463
HindIII AAGCTT 1 cut(s) 879
HinfI GANTC 4 cut(s) 314, 611, 911, 1158
HpaII CCGG 4 cut(s) 51, 149, 389, 1019
HphI GGTGA 1 cut(s) 787
Hpy166II GTNNAC 2 cut(s) 457, 904
Hpy188I TCNGA 6 cut(s) 129, 263, 278, 497, 916, 998
Hpy188III TCNNGA 6 cut(s) 161, 332, 752, 824, 951, 1162
Hpy8I GTNNAC 2 cut(s) 457, 904
HpyAV CCTTC 5 cut(s) 472, 543, 721, 957, 1003
HpyCH4III ACNGT 3 cut(s) 70, 246, 643
HpyCH4V TGCA 1 cut(s) 673
HpyF10VI GCNNNNNNNGC 3 cut(s) 55, 416, 1014
HpyF3I CTNAG 7 cut(s) 128, 260, 299, 312, 771, 1035, 1101
Hsp92II CATG 6 cut(s) 15, 164, 235, 376, 611, 634
HspAI GCGC 1 cut(s) 463
Kzo9I GATC 3 cut(s) 777, 1027, 1113
LguI GCTCTTC 1 cut(s) 108
LmnI GCTCC 4 cut(s) 151, 897, 998, 1087
Lsp1109I GCAGC 1 cut(s) 155
LweI GCATC 2 cut(s) 28, 508
MaeI CTAG 3 cut(s) 332, 951, 1131
MalI GATC 3 cut(s) 779, 1029, 1115
MboI GATC 3 cut(s) 777, 1027, 1113
MhlI GDGCHC 4 cut(s) 120, 472, 1019, 1109
MlsI TGGCCA 3 cut(s) 227, 606, 621
MluCI AATT 6 cut(s) 221, 279, 487, 938, 1044, 1092
MluNI TGGCCA 3 cut(s) 227, 606, 621
MlyI GAGTC 2 cut(s) 323, 620
MnlI CCTC 9 cut(s) 187, 319, 330, 702, 705, 820, 1075, 1110, 1134
Mox20I TGGCCA 3 cut(s) 227, 606, 621
MroXI GAANNNNTTC 2 cut(s) 92, 789
MscI TGGCCA 3 cut(s) 227, 606, 621
MseI TTAA 7 cut(s) 45, 251, 414, 704, 741, 942, 1095
Msp20I TGGCCA 3 cut(s) 227, 606, 621
MspCI CTTAAG 2 cut(s) 413, 740
MspI CCGG 4 cut(s) 51, 149, 389, 1019
MspR9I CCNGG 7 cut(s) 51, 389, 390, 662, 889, 1019, 1020
Mva1269I GAATGC 1 cut(s) 604
MvaI CCWGG 2 cut(s) 662, 889
MwoI GCNNNNNNNGC 3 cut(s) 55, 416, 1014
NciI CCSGG 5 cut(s) 51, 389, 390, 1019, 1020
NcoI CCATGG 2 cut(s) 231, 372
NdeII GATC 3 cut(s) 777, 1027, 1113
NlaIII CATG 6 cut(s) 15, 164, 235, 376, 611, 634
NlaIV GGNNCC 1 cut(s) 470
NspI RCATGY 1 cut(s) 15
PagI TCATGA 1 cut(s) 160
PciI ACATGT 1 cut(s) 11
PciSI GCTCTTC 1 cut(s) 108
PctI GAATGC 1 cut(s) 604
PdmI GAANNNNTTC 2 cut(s) 92, 789
PfeI GAWTC 2 cut(s) 911, 1158
PflFI GACNNNGTC 1 cut(s) 313
PflMI CCANNNNNTGG 1 cut(s) 633
PkrI GCNGC 1 cut(s) 145
PleI GAGTC 2 cut(s) 322, 619
PpsI GAGTC 2 cut(s) 322, 619
PscI ACATGT 1 cut(s) 11
PshBI ATTAAT 1 cut(s) 1095
Psp6I CCWGG 2 cut(s) 660, 887
PspGI CCWGG 2 cut(s) 660, 887
PspN4I GGNNCC 1 cut(s) 470
PspOMI GGGCCC 1 cut(s) 468
PspPI GGNCC 2 cut(s) 468, 469
PstNI CAGNNNCTG 1 cut(s) 311
PsyI GACNNNGTC 1 cut(s) 313
RsaI GTAC 2 cut(s) 179, 593
RsaNI GTAC 2 cut(s) 178, 592
SapI GCTCTTC 1 cut(s) 108
SaqAI TTAA 7 cut(s) 45, 251, 414, 704, 741, 942, 1095
SatI GCNGC 1 cut(s) 144
Sau3AI GATC 3 cut(s) 777, 1027, 1113
Sau96I GGNCC 2 cut(s) 468, 469
SchI GAGTC 2 cut(s) 323, 620
ScrFI CCNGG 7 cut(s) 51, 389, 390, 662, 889, 1019, 1020
SduI GDGCHC 4 cut(s) 120, 472, 1019, 1109
SetI ASST 7 cut(s) 148, 432, 777, 883, 1003, 1041, 1086
SfaNI GCATC 2 cut(s) 28, 508
SmaI CCCGGG 2 cut(s) 390, 1020
SmlI CTYRAG 2 cut(s) 413, 740
SmoI CTYRAG 2 cut(s) 413, 740
Sse9I AATT 6 cut(s) 221, 279, 487, 938, 1044, 1092
SspMI CTAG 3 cut(s) 332, 951, 1131
StyD4I CCNGG 7 cut(s) 49, 387, 388, 660, 887, 1017, 1018
StyI CCWWGG 4 cut(s) 231, 372, 681, 1130
TaaI ACNGT 3 cut(s) 70, 246, 643
TaqI TCGA 4 cut(s) 421, 751, 780, 823
TasI AATT 6 cut(s) 221, 279, 487, 938, 1044, 1092
TatI WGTACW 2 cut(s) 177, 591
TfiI GAWTC 2 cut(s) 911, 1158
Tru1I TTAA 7 cut(s) 45, 251, 414, 704, 741, 942, 1095
Tru9I TTAA 7 cut(s) 45, 251, 414, 704, 741, 942, 1095
TscAI CASTG 2 cut(s) 911, 1109
TseI GCWGC 1 cut(s) 143
TspDTI ATGAA 4 cut(s) 177, 280, 579, 798
TspMI CCCGGG 2 cut(s) 388, 1018
TspRI CASTG 2 cut(s) 911, 1109
Tth111I GACNNNGTC 1 cut(s) 313
Van91I CCANNNNNTGG 1 cut(s) 633
Vha464I CTTAAG 2 cut(s) 413, 740
VspI ATTAAT 1 cut(s) 1095
XagI CCTNNNNNAGG 1 cut(s) 892
XapI RAATTY 1 cut(s) 938
XbaI TCTAGA 2 cut(s) 331, 950
XceI RCATGY 1 cut(s) 15
XcmI CCANNNNNNNNNTGG 3 cut(s) 479, 614, 1070
XmaI CCCGGG 2 cut(s) 388, 1018
XmaJI CCTAGG 1 cut(s) 1130
XmiI GTMKAC 1 cut(s) 456
XmnI GAANNNNTTC 2 cut(s) 92, 789
XspI CTAG 3 cut(s) 332, 951, 1131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.