Rroxscaffold_3G00249790

Ent-kaurenoic acid oxidase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Reverse (-)
43566225 .. 43569083
2859 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00249790.1

Sequence Viewer

Length: 1182 bp
ATGCGCGACGACGCCGATCAACCGAAACCGAATCGGGCATATGGTCAGACAGGAATTTACAAGGCCTATTTGTTTGGAAAGCCAACCATCATTGCTGCAGCACCGGAAGTATGTAGAAAGATCTTAACTGATGATACACATTTCAAGGCTGGCTGGCCAAAATCCACTACTGAACTACTGGGAAAGCTGGCATTTATGGGCAGTTCTGCAGAGGAACACAAGCGCCTTCGCAAGCTGACCGCAGCTCCAATCAGTGGTCACAAGGCACTGTCTATGTACCATGAATACATCAAGGATGCCATAGTAACTTCATTGGATGAATGGTCTAAATCTGAGGAGCCAATTGAGTTCTTGACAGAGATTAGGAAGTTAACTTTCAAAATAGTCATGCACATTTTTCTGAGCTCTGAGATTGGTCCCATGTTGGAGGCCTTAGAAAACGATTATACTATTCTCAATCATGGACTAAGATCCATGGCCATTAACATTCCTGGCTTTGCTTATCATAAAGCACTCAAGGCTCGAAAAAGGTTGGTTAAGGTTCTTCAAGTGATTGTCGATCAAAGAAGAGAAGGAAAGGAGGGTAATCTATCAGGGGAAAGAAGAGATTTGATGGATTTGTTACTGGAAGCCGAAGATGAGACTGGTAGAAAACTATATGATGAGGAGATCATAGACATAATCCTCATGTACTTAAATGCTGGTCATGAATCTTCAGCCCATGCCACAATGTGGGCTACTCTCTTCTTACATCAAAATCCAGAATACTACCAAAAAGCCAAGGCAGAGCAAGAGGAGATTCTTAGAAGTGTATCACCAGAAAATGGATTGAGCTTCAAAGAGACTAAACAGATGGAATATCTTTCTAAGGTAATTGACGAAACAATGCGTGTGGTTAATATCTCACTGTATACTTACCGGGAGGCTACAGCTGATGTCAACATCTCTGGATACACAATACCAAAGGGATGGAAAGTGATGATGTGGTTCAGAGGAATTCATTTGAATCCAGAAATTTATCAAGATCCAAAGGAGTTCAATCCCTCAAGATGGAATGAAAGTAAAGCCAAGGCGGGGACTTACATTCCCTTTGGAATAGGAAGTAGGCAGTGCCCTGGAAGTGATTTGACCAAGCTTGAAATTACTACATTTCTTCACTATTTTCTCCTTAATTATGAGTAA

Protein Analysis

393

Amino Acids

45.09

Weight (kDa)

6.49

Isoelectric Point (pI)

44.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 19 - 393 3.6e-62 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 3 cut(s) 254, 732, 824
AccI GTMKAC 1 cut(s) 911
AccII CGCG 1 cut(s) 6
AciI CCGC 2 cut(s) 240, 1073
AclWI GGATC 2 cut(s) 465, 1019
AcoI YGGCCR 2 cut(s) 155, 477
AcsI RAATTY 3 cut(s) 54, 996, 1014
AcuI CTGAAG 1 cut(s) 699
AcyI GRCGYC 1 cut(s) 12
AdeI CACNNNGTG 1 cut(s) 732
AfaI GTAC 2 cut(s) 278, 692
AfiI CCNNNNNNNGG 5 cut(s) 254, 732, 824, 1050, 1074
AgsI TTSAA 7 cut(s) 145, 379, 548, 838, 1006, 1039, 1139
AjnI CCWGG 2 cut(s) 490, 1114
AluBI AGCT 7 cut(s) 187, 235, 245, 405, 834, 932, 1135
AluI AGCT 7 cut(s) 187, 235, 245, 405, 834, 932, 1135
Alw21I GWGCWC 1 cut(s) 407
Alw26I GTCTC 2 cut(s) 635, 836
AlwI GGATC 2 cut(s) 465, 1019
AoxI GGCC 4 cut(s) 63, 155, 429, 477
ApeKI GCWGC 3 cut(s) 95, 98, 242
ApoI RAATTY 3 cut(s) 54, 996, 1014
AspLEI GCGC 2 cut(s) 6, 225
AspS9I GGNCC 1 cut(s) 416
AsuC2I CCSGG 1 cut(s) 920
AsuHPI GGTGA 1 cut(s) 807
AvaII GGWCC 1 cut(s) 416
BaeGI GKGCMC 1 cut(s) 1115
BalI TGGCCA 2 cut(s) 157, 479
BanII GRGCYC 1 cut(s) 407
Bbv12I GWGCWC 1 cut(s) 407
BbvI GCAGC 3 cut(s) 82, 110, 254
BccI CCATC 5 cut(s) 95, 607, 847, 963, 1044
BciT130I CCWGG 2 cut(s) 492, 1116
BciVI GTATCC 1 cut(s) 944
BcnI CCSGG 1 cut(s) 920
BcoDI GTCTC 2 cut(s) 635, 836
BfmI CTRYAG 3 cut(s) 96, 207, 927
BfoI RGCGCY 1 cut(s) 226
BfuI GTATCC 1 cut(s) 944
BglII AGATCT 1 cut(s) 120
BisI GCNGC 3 cut(s) 96, 99, 243
BlsI GCNGC 3 cut(s) 97, 100, 244
Bme1390I CCNGG 3 cut(s) 492, 920, 1116
Bme18I GGWCC 1 cut(s) 416
BmgT120I GGNCC 1 cut(s) 416
BmiI GGNNCC 2 cut(s) 339, 418
BmrFI CCNGG 3 cut(s) 492, 920, 1116
BmrI ACTGGG 1 cut(s) 188
BmsI GCATC 1 cut(s) 286
BmuI ACTGGG 1 cut(s) 188
BpuEI CTTGAG 2 cut(s) 500, 1030
BpuMI CCSGG 1 cut(s) 920
BsaHI GRCGYC 1 cut(s) 12
BsaJI CCNNGG 4 cut(s) 474, 780, 1068, 1114
BsaWI WCCGGW 1 cut(s) 103
BsaXI ACNNNNNCTCC 2 cut(s) 229, 259
Bsc4I CCNNNNNNNGG 5 cut(s) 254, 732, 824, 1050, 1074
Bse1I ACTGG 3 cut(s) 183, 630, 649
Bse3DI GCAATG 1 cut(s) 90
BseBI CCWGG 2 cut(s) 492, 1116
BseDI CCNNGG 4 cut(s) 474, 780, 1068, 1114
BseGI GGATG 3 cut(s) 301, 322, 974
BseLI CCNNNNNNNGG 5 cut(s) 254, 732, 824, 1050, 1074
BseMI GCAATG 1 cut(s) 90
BseMII CTCAG 3 cut(s) 324, 392, 399
BseNI ACTGG 3 cut(s) 183, 630, 649
BseRI GAGGAG 3 cut(s) 350, 680, 809
BseSI GKGCMC 1 cut(s) 1115
BseXI GCAGC 3 cut(s) 82, 110, 254
Bsh1236I CGCG 1 cut(s) 6
BshFI GGCC 4 cut(s) 65, 157, 431, 479
BsiHKAI GWGCWC 1 cut(s) 407
BsiSI CCGG 2 cut(s) 104, 919
BslFI GGGAC 2 cut(s) 402, 1090
BslI CCNNNNNNNGG 5 cut(s) 254, 732, 824, 1050, 1074
BsmAI GTCTC 2 cut(s) 635, 836
BsmFI GGGAC 2 cut(s) 402, 1090
BsnI GGCC 4 cut(s) 65, 157, 431, 479
Bsp1286I GDGCHC 2 cut(s) 407, 1115
Bsp143I GATC 6 cut(s) 16, 120, 470, 559, 669, 1024
Bsp19I CCATGG 1 cut(s) 474
BspACI CCGC 2 cut(s) 240, 1073
BspANI GGCC 4 cut(s) 65, 157, 431, 479
BspCNI CTCAG 3 cut(s) 325, 393, 400
BspFNI CGCG 1 cut(s) 6
BspHI TCATGA 1 cut(s) 706
BspLI GGNNCC 2 cut(s) 339, 418
BspMAI CTGCAG 2 cut(s) 100, 211
BspPI GGATC 2 cut(s) 465, 1019
BsrDI GCAATG 1 cut(s) 90
BsrI ACTGG 3 cut(s) 183, 630, 649
BssECI CCNNGG 4 cut(s) 474, 780, 1068, 1114
BssMI GATC 6 cut(s) 16, 120, 470, 559, 669, 1024
BssNAI GTATAC 1 cut(s) 912
BssNI GRCGYC 1 cut(s) 12
BssT1I CCWWGG 3 cut(s) 474, 780, 1068
Bst1107I GTATAC 1 cut(s) 912
Bst2UI CCWGG 2 cut(s) 492, 1116
Bst4CI ACNGT 2 cut(s) 270, 909
Bst6I CTCTTC 3 cut(s) 562, 598, 749
BstACI GRCGYC 1 cut(s) 12
BstC8I GCNNGC 4 cut(s) 151, 155, 189, 233
BstDEI CTNAG 7 cut(s) 333, 401, 408, 433, 467, 803, 867
BstDSI CCRYGG 1 cut(s) 474
BstF5I GGATG 3 cut(s) 301, 322, 974
BstFNI CGCG 1 cut(s) 6
BstH2I RGCGCY 1 cut(s) 226
BstHHI GCGC 2 cut(s) 6, 225
BstKTI GATC 6 cut(s) 19, 123, 473, 562, 672, 1027
BstMAI GTCTC 2 cut(s) 635, 836
BstMBI GATC 6 cut(s) 16, 120, 470, 559, 669, 1024
BstMWI GCNNNNNNNGC 1 cut(s) 518
BstNI CCWGG 2 cut(s) 492, 1116
BstSCI CCNGG 3 cut(s) 490, 918, 1114
BstSFI CTRYAG 3 cut(s) 96, 207, 927
BstSLI GKGCMC 1 cut(s) 1115
BstUI CGCG 1 cut(s) 6
BstV1I GCAGC 3 cut(s) 82, 110, 254
BstX2I RGATCY 3 cut(s) 120, 470, 1024
BstXI CCANNNNNNTGG 1 cut(s) 969
BstYI RGATCY 3 cut(s) 120, 470, 1024
BstZ17I GTATAC 1 cut(s) 912
BsuI GTATCC 1 cut(s) 944
BsuRI GGCC 4 cut(s) 65, 157, 431, 479
BtgI CCRYGG 1 cut(s) 474
BtsCI GGATG 3 cut(s) 301, 322, 974
BtsI GCAGTG 1 cut(s) 1115
BtsIMutI CAGTG 4 cut(s) 259, 266, 905, 1115
Cac8I GCNNGC 4 cut(s) 151, 155, 189, 233
CciI TCATGA 1 cut(s) 706
CfoI GCGC 2 cut(s) 6, 225
Cfr13I GGNCC 1 cut(s) 416
CseI GACGC 1 cut(s) 20
Csp6I GTAC 2 cut(s) 277, 691
CspCI CAANNNNNGTGG 2 cut(s) 873, 908
CviAII CATG 8 cut(s) 281, 388, 421, 461, 475, 688, 707, 722
CviQI GTAC 2 cut(s) 277, 691
DdeI CTNAG 7 cut(s) 333, 401, 408, 433, 467, 803, 867
DpnI GATC 6 cut(s) 18, 122, 472, 561, 671, 1026
DpnII GATC 6 cut(s) 16, 120, 470, 559, 669, 1024
DraIII CACNNNGTG 1 cut(s) 732
EaeI YGGCCR 2 cut(s) 155, 477
Eam1104I CTCTTC 3 cut(s) 562, 598, 749
EarI CTCTTC 3 cut(s) 562, 598, 749
Ecl136II GAGCTC 1 cut(s) 405
Eco130I CCWWGG 3 cut(s) 474, 780, 1068
Eco147I AGGCCT 2 cut(s) 65, 431
Eco24I GRGCYC 1 cut(s) 407
Eco47I GGWCC 1 cut(s) 416
Eco53kI GAGCTC 1 cut(s) 405
Eco57I CTGAAG 1 cut(s) 699
EcoICRI GAGCTC 1 cut(s) 405
EcoRI GAATTC 1 cut(s) 996
EcoRII CCWGG 2 cut(s) 490, 1114
EcoT14I CCWWGG 3 cut(s) 474, 780, 1068
EcoT38I GRGCYC 1 cut(s) 407
ErhI CCWWGG 3 cut(s) 474, 780, 1068
FaeI CATG 8 cut(s) 284, 391, 424, 464, 478, 691, 710, 725
FaqI GGGAC 2 cut(s) 402, 1090
FatI CATG 8 cut(s) 280, 387, 420, 460, 474, 687, 706, 721
FauI CCCGC 1 cut(s) 1066
FauNDI CATATG 1 cut(s) 40
FblI GTMKAC 1 cut(s) 911
Fnu4HI GCNGC 3 cut(s) 96, 99, 243
FokI GGATG 3 cut(s) 308, 329, 981
FriOI GRGCYC 1 cut(s) 407
Fsp4HI GCNGC 3 cut(s) 96, 99, 243
GlaI GCGC 2 cut(s) 5, 224
GluI GCNGC 3 cut(s) 96, 99, 243
HaeII RGCGCY 1 cut(s) 226
HaeIII GGCC 4 cut(s) 65, 157, 431, 479
HapII CCGG 2 cut(s) 104, 919
HgaI GACGC 1 cut(s) 20
HhaI GCGC 2 cut(s) 6, 225
Hin1I GRCGYC 1 cut(s) 12
Hin1II CATG 8 cut(s) 284, 391, 424, 464, 478, 691, 710, 725
Hin6I GCGC 2 cut(s) 4, 223
HinP1I GCGC 2 cut(s) 4, 223
HincII GTYRAC 2 cut(s) 372, 940
HindII GTYRAC 2 cut(s) 372, 940
HindIII AAGCTT 1 cut(s) 1133
HinfI GANTC 4 cut(s) 31, 710, 799, 1006
HpaI GTTAAC 1 cut(s) 372
HpaII CCGG 2 cut(s) 104, 919
HphI GGTGA 1 cut(s) 807
Hpy166II GTNNAC 3 cut(s) 372, 912, 940
Hpy188I TCNGA 5 cut(s) 48, 334, 402, 409, 992
Hpy188III TCNNGA 7 cut(s) 352, 707, 761, 948, 1010, 1022, 1047
Hpy8I GTNNAC 3 cut(s) 372, 912, 940
Hpy99I CGWCG 2 cut(s) 11, 14
HpyAV CCTTC 2 cut(s) 236, 566
HpyCH4III ACNGT 2 cut(s) 270, 909
HpyCH4V TGCA 3 cut(s) 98, 209, 391
HpyF10VI GCNNNNNNNGC 1 cut(s) 518
HpyF3I CTNAG 7 cut(s) 333, 401, 408, 433, 467, 803, 867
Hsp92I GRCGYC 1 cut(s) 12
Hsp92II CATG 8 cut(s) 284, 391, 424, 464, 478, 691, 710, 725
HspAI GCGC 2 cut(s) 4, 223
KspAI GTTAAC 1 cut(s) 372
Kzo9I GATC 6 cut(s) 16, 120, 470, 559, 669, 1024
LmnI GCTCC 2 cut(s) 250, 337
Lsp1109I GCAGC 3 cut(s) 82, 110, 254
LweI GCATC 1 cut(s) 286
MaeIII GTNAC 3 cut(s) 257, 304, 621
MalI GATC 6 cut(s) 18, 122, 472, 561, 671, 1026
MboI GATC 6 cut(s) 16, 120, 470, 559, 669, 1024
MboII GAAGA 7 cut(s) 536, 579, 615, 647, 705, 736, 1145
MfeI CAATTG 1 cut(s) 342
MflI RGATCY 3 cut(s) 120, 470, 1024
MhlI GDGCHC 2 cut(s) 407, 1115
MlsI TGGCCA 2 cut(s) 157, 479
MluCI AATT 7 cut(s) 54, 342, 873, 996, 1014, 1140, 1171
MluNI TGGCCA 2 cut(s) 157, 479
MmeI TCCRAC 1 cut(s) 405
Mox20I TGGCCA 2 cut(s) 157, 479
MscI TGGCCA 2 cut(s) 157, 479
MseI TTAA 7 cut(s) 125, 371, 483, 537, 695, 897, 1170
Msp20I TGGCCA 2 cut(s) 157, 479
MspA1I CMGCKG 1 cut(s) 932
MspI CCGG 2 cut(s) 104, 919
MspR9I CCNGG 3 cut(s) 492, 920, 1116
MunI CAATTG 1 cut(s) 342
MvaI CCWGG 2 cut(s) 492, 1116
MvnI CGCG 1 cut(s) 6
MwoI GCNNNNNNNGC 1 cut(s) 518
NciI CCSGG 1 cut(s) 920
NcoI CCATGG 1 cut(s) 474
NdeI CATATG 1 cut(s) 40
NdeII GATC 6 cut(s) 16, 120, 470, 559, 669, 1024
NlaIII CATG 8 cut(s) 284, 391, 424, 464, 478, 691, 710, 725
NlaIV GGNNCC 2 cut(s) 339, 418
NmuCI GTSAC 1 cut(s) 257
PagI TCATGA 1 cut(s) 706
PceI AGGCCT 2 cut(s) 65, 431
PfeI GAWTC 4 cut(s) 31, 710, 799, 1006
PflMI CCANNNNNTGG 3 cut(s) 254, 732, 824
PkrI GCNGC 3 cut(s) 97, 100, 244
Psp124BI GAGCTC 1 cut(s) 407
Psp6I CCWGG 2 cut(s) 490, 1114
PspGI CCWGG 2 cut(s) 490, 1114
PspN4I GGNNCC 2 cut(s) 339, 418
PspPI GGNCC 1 cut(s) 416
PstI CTGCAG 2 cut(s) 100, 211
PsuI RGATCY 3 cut(s) 120, 470, 1024
PvuII CAGCTG 1 cut(s) 932
RsaI GTAC 2 cut(s) 278, 692
RsaNI GTAC 2 cut(s) 277, 691
SacI GAGCTC 1 cut(s) 407
SaqAI TTAA 7 cut(s) 125, 371, 483, 537, 695, 897, 1170
SatI GCNGC 3 cut(s) 96, 99, 243
Sau3AI GATC 6 cut(s) 16, 120, 470, 559, 669, 1024
Sau96I GGNCC 1 cut(s) 416
ScrFI CCNGG 3 cut(s) 492, 920, 1116
SduI GDGCHC 2 cut(s) 407, 1115
SfaNI GCATC 1 cut(s) 286
SfcI CTRYAG 3 cut(s) 96, 207, 927
SinI GGWCC 1 cut(s) 416
SmlI CTYRAG 2 cut(s) 515, 1045
SmoI CTYRAG 2 cut(s) 515, 1045
Sse9I AATT 7 cut(s) 54, 342, 873, 996, 1014, 1140, 1171
SseBI AGGCCT 2 cut(s) 65, 431
SsiI CCGC 2 cut(s) 240, 1073
SstI GAGCTC 1 cut(s) 407
StuI AGGCCT 2 cut(s) 65, 431
StyD4I CCNGG 3 cut(s) 490, 918, 1114
StyI CCWWGG 3 cut(s) 474, 780, 1068
TaaI ACNGT 2 cut(s) 270, 909
TaqI TCGA 2 cut(s) 523, 558
TasI AATT 7 cut(s) 54, 342, 873, 996, 1014, 1140, 1171
TatI WGTACW 1 cut(s) 690
TfiI GAWTC 4 cut(s) 31, 710, 799, 1006
Tru1I TTAA 7 cut(s) 125, 371, 483, 537, 695, 897, 1170
Tru9I TTAA 7 cut(s) 125, 371, 483, 537, 695, 897, 1170
TscAI CASTG 4 cut(s) 259, 273, 912, 1115
TseFI GTSAC 1 cut(s) 257
TseI GCWGC 3 cut(s) 95, 98, 242
Tsp45I GTSAC 1 cut(s) 257
TspDTI ATGAA 6 cut(s) 297, 300, 333, 723, 989, 1071
TspRI CASTG 4 cut(s) 259, 273, 912, 1115
Van91I CCANNNNNTGG 3 cut(s) 254, 732, 824
VpaK11BI GGWCC 1 cut(s) 416
XapI RAATTY 3 cut(s) 54, 996, 1014
XmiI GTMKAC 1 cut(s) 911
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.