Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004411

Physical Location & Seq

Genomic Coordinates Reverse (-)

1601148 .. 1605034

Gene Structure 3887 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G05460.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3009 bp

ATGAGTGTGAGTGGATACAAATCGGATGACGAATATTCTGTAATCGCAGACAAGGGAGAGATTGGATTTATAGACTATCAGAATGATGGATCTTCTGGTTGCTACAATCCATTTGATGAAGGTCCAGTTGTTGTTTCTGTTCCTTTCCCATTTAAGAAAGAGAAGCCTCAATCTGTAACTGTTGGAGAGACTTCTTTTGATTCCTTCACTGTCAAGAACACTATGGATGAGCCTGTTGATCTCTGGACTAAGATTTACGCATCTAACCCTGAGGATTCTTTTACTCTCTCGATATTGAAACCGCCTTCGAAAGATTCAGACTTGAAAGAGAGACAGTGTTTTTATGAAACTTTTACTCTGGAAGATAGGATGCTTGAGCCTGGTGACACTTTGACCATTTGGGTGTCTTGTAAGCCTAAGGACATTGGTTTACATACCACTGTTGTTACTGTTGACTGGGGAAGTGATAGGGTTGAGCGGGTTGTTTTCCTTTTGGCTGAGGATAAGATTTCGAGTTCTCTGACTTCTAACAGGCCTTACTCTAGAAGTAGAAGGGCTCCGAAGAAAGATTTTGCTGTGGATGATTATGTGAAGGGATCACGCCCTTCAAAGGTGGTTGAACGTAGTTTTAGAAATAGGCTTCCTCTGTATGAAATTCCAAAGGAGATTAGAGAGATGATCGAGAATAAGGAATTCCCTGATGATTTGAACGAAGGTCTTACAGCAAGGAACTATGCTAACTACTATAAAACTTTACTGATTATGGAAGAATTACAACTCGAGGAAGACATGCGAGCTTATGATATGGAGAATGTTTCAATGAAGAGAAGGGGTATCTATTTGTCCCTCGAAGTTCCTGGCCTTGCTGAGAGAAGACCTTCCCTTGTCCATGGAGACTTCATCTTTGTTAGACATGCATATGATGATGGAACTGACCACGCTTATCAGGGCTTTGTACACCGCGTAGAGGCGGATGAAGTACATATGAAGTTTGCCTCTGAGTTCCACCAACGCCACACAGCTGGGAGTGTCTATAATGTGAGGTTCACATACAATCGAATCAACACTAGAAGGTTGTATCAGGCTGTTGATGCGGCAGAAATGTTGGATCCAAACTTCCTTTTCCCATCCTTGCACTCTGGGAAAAGGATGATAAAGACAAAACCCTTTGTGCCCATTTCACCAGCTCTTAATGCAGAGCAGATTTGTTCCATTGAAATGGTTCTTGGCTGCAAAGGAGCACCACCATATGTAATCCATGGACCTCCTGGTACTGGGAAAACCATGACATTGGTGGAGGCTATAGTTCAACTTTATACAACACAGAGAAATGCTCGGGTTCTTGTCTGTGCTCCCTCCAATAGTGCAGCTGATCACATTTTAGAGAAACTCCTTTGTTTAGAGGGAGTTCGCATCAAGGACAATGAGATTTTCAGGCTGAATGCAGCTACTCGTTCATATGAAGAAATTAAGCCTGAGATTATCCGCTTTTGCTTCTTTGATGAGTTAATTTTCAAGTGCCCCCCTCTCAAAGCTTTGACTCGTTACAAACTCGTTGTGTCAACATATATGAGTGCATCGCTTCTTAACGCGGAAGGTGTAAACCGTGGTCACTTCACTCATATTCTCTTAGATGAGGCTGGTCAAGCTTCAGAGCCTGAAAACATGATTGCTGTATCAAATCTCTGCTTGACAGAAACTGTGGTTGTGCTTGCTGGAGATCCAAGGCAATTGGGTCCGGTTATATACTCAAGAGATGCTGAGTCACTCGGCTTGGGGAAGTCATACTTGGAAAGATTGTTTGAGTGTGATTATTACTGCGAAGGGGATGAGAATTATGTAACAAAGCTAGTCAAGAACTACAGATGCCACCCAGAGATTCTTGATCTCCCGTCAAAGCTCTTCTATGATGGAGAACTGGTAGCTTCCAAAGAAGACACAGACTCTGTTCTTGCCTCGTTAAACTTCCTTCCAAACAAAGAATTTCCGATGGTTTTCTATGGGATCCAAGGATGCGATGAGAGGGAAGGTAACAATCCGTCCTGGTTCAACCGTATAGAGATCAGCAAAGTTATAGAGACAATCAAGAGATTAACAGCGAATGACTGTGTGCAAGAAGAGGATATCGGAGTTATAACTCCTTACAGGCAGCAAGTAATGAAGATCAAGGAGGTTCTTGACAGGTTAGATATGACTGAAGTCAAAGTTGGTAGTGTAGAGCAATTCCAAGGTCAAGAGAAACAGGTCATCATCATTTCAACTGTAAGATCTACTATCAAACACAACGAGTTCGATAGAGCCTATTGTCTGGGCTTCCTGAGCAATCCAAGGAGGTTTAATGTCGCCATAACCCGTGCAATCTCTCTGCTAGTGATCATCGGAAACCCACATATCATATGCAAGGACATGAACTGGAACAAGCTTTTGTGGCGATGTGTGGATAACAATGCTTACCAAGGATGCGGTTTACCAGAGCAGGAGGAGTTTGTGGAGGAACCATTCAAGCAAGAAGGAAGCAGCAATGGGCCTCAATACCCTCCAGAAGCTGAGTGGAACAACAGTGGAGAGCTCAACAATGGTGGTGCGAATGAGAATGGTGAATGGTCTGATGGGTGGAACAACAATGGCGGCACAAAGGAAAAAAATGAATGGTCTGATGGATGGAACAGCAATGGTGGTGGGACAAAGAAGAAAGATGAATGGTCTGATGGGTGGGACAACAATGGCGGCACAAACGGGATCAATCAAGAAGGAAGCAGCAACGCTCCCCAAGACCCTCAAGAAGCCGAGTGGAACGATAGTGGCGAGGTCAAGAATGGTGGCACAAAGGAGAAAGATGTCAGGTCTGATGGGTGGAACAACAATGGCGGAAAAAATGAAAAAGAAGAATGTTGTGATGGTTGGAAAGACGGCGGCAGTGGTGAAGAGATCAAGAATGGTGGTAAGTTTGAAACCAGAGGTGATTTTGTAGCCAAGGAAGAAGATGAGTGGTCTGATGGGTGGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002252 GO:0002376 GO:0003674 GO:0003724 GO:0003824 GO:0004386 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0009605 GO:0009607 GO:0009615 GO:0009616 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0016441 GO:0016458 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0019222 GO:0031047 GO:0035194 GO:0035821 GO:0040029 GO:0043207 GO:0044003 GO:0044403 GO:0044419 GO:0045087 GO:0048519 GO:0050789 GO:0050896 GO:0051607 GO:0051701 GO:0051704 GO:0051707 GO:0051817 GO:0052018 GO:0052249 GO:0060255 GO:0065007 GO:0098542 GO:0098586 GO:0140098

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA_11 AAA_12

Protein Analysis

1002

Amino Acids

113.36

Weight (kDa)

4.96

Isoelectric Point (pI)

42.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MOV-10_beta-barrel	PF21634	267 - 349	2.7e-28	Helicase MOV-10, beta-barrel domain
AAA_11	PF13086	397 - 484	2.7e-17	AAA domain
AAA_30	PF13604	397 - 581	6.8e-12	AAA domain
ResIII	PF04851	412 - 559	2.6e-07	Type III restriction enzyme, res subunit
AAA_19	PF13245	415 - 581	1.6e-08	AAA domain
AAA_11	PF13086	512 - 584	1.3e-10	AAA domain
AAA_12	PF13087	593 - 796	1.4e-51	AAA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0004411)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05460 AT1G05460
fragaria_vesca	FvH4_4g15972 FvH4_4g15972 FvH4_4g15972 FvH4_4g15972 FvH4_4g15972 FvH4_4g15972 FvH4_4g15972
malus_domestica	MD13G1196500.v1.1
prunus_persica	Prupe.1G017300_v2.0.a1 Prupe.1G017300_v2.0.a1 Prupe.1G017300_v2.0.a1 Prupe.1G017300_v2.0.a1 Prupe.1G017300_v2.0.a1 Prupe.1G017300_v2.0.a1
pyrus_communis	pycom13g16860
rosa_chinensis	RchiOBHm_Chr4g0415581
rosa_laevigata	RLG00000008062
rosa_multiflora	Rmu_sc0004599.1_g000006
rosa_roxburghii	Rroxscaffold_5G00359390
rosa_rugosa	Rorug04G0134800 Rorug04G0134900 Rorug04G0135000 Rorug04G0135100 Rorug04G0135200 Rorug04G0135300
rosa_samantha	Rh4AG196200 Rh4BG194900 Rh4CG206900 Rh4DG193800
rosa_wichuraiana	Rw4G016680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2135
AccBSI	CCGCTC	1 cut(s)	478
AccII	CGCG	2 cut(s)	963, 1592
AclWI	GGATC	8 cut(s)	97, 604, 1103, 1116, 1715, 1999, 2012, 2747
AcsI	RAATTY	3 cut(s)	654, 692, 1982
AcuI	CTGAAG	2 cut(s)	1635, 2217
AfaI	GTAC	3 cut(s)	957, 981, 1273
AfiI	CCNNNNNNNGG	3 cut(s)	610, 967, 1274
AjnI	CCWGG	4 cut(s)	379, 856, 1267, 2042
AjuI	GAANNNNNNNTTGG	6 cut(s)	1209, 1241, 1772, 1804, 2190, 2222
Alw21I	GWGCWC	3 cut(s)	1243, 1354, 2571
Alw26I	GTCTC	4 cut(s)	182, 325, 888, 2072
AlwI	GGATC	8 cut(s)	97, 604, 1103, 1116, 1715, 1999, 2012, 2747
AlwNI	CAGNNNCTG	4 cut(s)	1658, 1700, 1946, 2546
Ama87I	CYCGRG	2 cut(s)	779, 1335
AoxI	GGCC	3 cut(s)	533, 859, 2525
ApeKI	GCWGC	6 cut(s)	1230, 1367, 1445, 2149, 2517, 2757
ApoI	RAATTY	3 cut(s)	654, 692, 1982
ArsI	GACNNNNNNTTYG	2 cut(s)	887, 919
Asp700I	GAANNNNTTC	2 cut(s)	877, 1221
AspS9I	GGNCC	4 cut(s)	122, 1262, 1736, 2525
AsuHPI	GGTGA	5 cut(s)	395, 1173, 2609, 2933, 2972
AsuII	TTCGAA	1 cut(s)	308
AvaI	CYCGRG	2 cut(s)	779, 1335
AvaII	GGWCC	3 cut(s)	122, 1262, 1736
AxyI	CCTNAGG	2 cut(s)	270, 417
BaeGI	GKGCMC	2 cut(s)	1176, 1523
BamHI	GGATCC	2 cut(s)	1108, 2004
BanII	GRGCYC	2 cut(s)	559, 2571
BbsI	GAAGAC	3 cut(s)	792, 880, 1941
Bbv12I	GWGCWC	3 cut(s)	1243, 1354, 2571
BbvCI	CCTCAGC	1 cut(s)	498
BbvI	GCAGC	6 cut(s)	1217, 1379, 1457, 2161, 2529, 2769
BceAI	ACGGC	1 cut(s)	2926
BciT130I	CCWGG	4 cut(s)	381, 858, 1269, 2044
BciVI	GTATCC	1 cut(s)	8
BclI	TGATCA	2 cut(s)	1372, 2373
BcoDI	GTCTC	4 cut(s)	182, 325, 888, 2072
BfaI	CTAG	4 cut(s)	543, 1068, 1850, 2369
BfmI	CTRYAG	2 cut(s)	1302, 1861
BfuI	GTATCC	1 cut(s)	8
BglII	AGATCT	1 cut(s)	2267
Bme1390I	CCNGG	4 cut(s)	381, 858, 1269, 2044
Bme18I	GGWCC	3 cut(s)	122, 1262, 1736
BmeT110I	CYCGRG	2 cut(s)	779, 1335
BmgT120I	GGNCC	4 cut(s)	122, 1262, 1736, 2525
BmiI	GGNNCC	5 cut(s)	558, 1110, 1737, 2006, 2496
BmrFI	CCNGG	4 cut(s)	381, 858, 1269, 2044
BmrI	ACTGGG	2 cut(s)	466, 1284
BmsI	GCATC	9 cut(s)	269, 360, 1081, 1422, 1586, 1747, 1856, 2003, 2450
BmuI	ACTGGG	2 cut(s)	466, 1284
BoxI	GACNNNNGTC	1 cut(s)	2198
BpiI	GAAGAC	3 cut(s)	792, 880, 1941
BplI	GAGNNNNNCTC	2 cut(s)	1318, 1350
BpmI	CTGGAG	2 cut(s)	1737, 2523
Bpu10I	CCTNAGC	2 cut(s)	498, 2318
Bpu14I	TTCGAA	1 cut(s)	308
BpuEI	CTTGAG	3 cut(s)	395, 1735, 2763
BsaBI	GATNNNNATC	1 cut(s)	19
BsaJI	CCNNGG	9 cut(s)	889, 1258, 1606, 1724, 2008, 2227, 2327, 2455, 2973
BsaWI	WCCGGW	1 cut(s)	1738
BsaXI	ACNNNNNCTCC	2 cut(s)	1905, 1935
Bsc4I	CCNNNNNNNGG	3 cut(s)	610, 967, 1274
Bse1I	ACTGG	5 cut(s)	125, 461, 1279, 1923, 2417
Bse21I	CCTNAGG	2 cut(s)	270, 417
Bse3DI	GCAATG	2 cut(s)	2527, 2677
Bse8I	GATNNNNATC	1 cut(s)	19
BseBI	CCWGG	4 cut(s)	381, 858, 1269, 2044
BseDI	CCNNGG	9 cut(s)	889, 1258, 1606, 1724, 2008, 2227, 2327, 2455, 2973
BseJI	GATNNNNATC	1 cut(s)	19
BseLI	CCNNNNNNNGG	3 cut(s)	610, 967, 1274
BseMI	GCAATG	2 cut(s)	2527, 2677
BseMII	CTCAG	8 cut(s)	261, 489, 858, 990, 1467, 1752, 2309, 2538
BseNI	ACTGG	5 cut(s)	125, 461, 1279, 1923, 2417
BseRI	GAGGAG	1 cut(s)	2495
BseSI	GKGCMC	2 cut(s)	1176, 1523
BseXI	GCAGC	6 cut(s)	1217, 1379, 1457, 2161, 2529, 2769
BseYI	CCCAGC	1 cut(s)	1022
BsgI	GTGCAG	1 cut(s)	1386
Bsh1236I	CGCG	2 cut(s)	963, 1592
BshFI	GGCC	3 cut(s)	535, 861, 2527
BsiHKAI	GWGCWC	3 cut(s)	1243, 1354, 2571
BsiHKCI	CYCGRG	2 cut(s)	779, 1335
BsiSI	CCGG	1 cut(s)	1739
BslFI	GGGAC	3 cut(s)	829, 2695, 2729
BslI	CCNNNNNNNGG	3 cut(s)	610, 967, 1274
BsmAI	GTCTC	4 cut(s)	182, 325, 888, 2072
BsmFI	GGGAC	3 cut(s)	829, 2695, 2729
BsmI	GAATGC	1 cut(s)	1447
BsnI	GGCC	3 cut(s)	535, 861, 2527
BsoBI	CYCGRG	2 cut(s)	779, 1335
Bsp119I	TTCGAA	1 cut(s)	308
Bsp1286I	GDGCHC	6 cut(s)	559, 1176, 1243, 1354, 1523, 2571
Bsp1407I	TGTACA	1 cut(s)	955
Bsp19I	CCATGG	2 cut(s)	889, 1258
BspANI	GGCC	3 cut(s)	535, 861, 2527
BspCNI	CTCAG	8 cut(s)	262, 490, 859, 991, 1468, 1753, 2310, 2539
BspFNI	CGCG	2 cut(s)	963, 1592
BspLI	GGNNCC	5 cut(s)	558, 1110, 1737, 2006, 2496
BspPI	GGATC	8 cut(s)	97, 604, 1103, 1116, 1715, 1999, 2012, 2747
BspQI	GCTCTTC	1 cut(s)	1907
BspT104I	TTCGAA	1 cut(s)	308
BsrBI	CCGCTC	1 cut(s)	478
BsrDI	GCAATG	2 cut(s)	2527, 2677
BsrGI	TGTACA	1 cut(s)	955
BsrI	ACTGG	5 cut(s)	125, 461, 1279, 1923, 2417
BssECI	CCNNGG	9 cut(s)	889, 1258, 1606, 1724, 2008, 2227, 2327, 2455, 2973
BssT1I	CCWWGG	8 cut(s)	889, 1258, 1724, 2008, 2227, 2327, 2455, 2973
Bst2UI	CCWGG	4 cut(s)	381, 858, 1269, 2044
Bst6I	CTCTTC	4 cut(s)	818, 1907, 2112, 2919
BstAUI	TGTACA	1 cut(s)	955
BstBI	TTCGAA	1 cut(s)	308
BstC8I	GCNNGC	2 cut(s)	795, 1713
BstDSI	CCRYGG	3 cut(s)	889, 1258, 1606
BstFNI	CGCG	2 cut(s)	963, 1592
BstMAI	GTCTC	4 cut(s)	182, 325, 888, 2072
BstMWI	GCNNNNNNNGC	5 cut(s)	1091, 1193, 1646, 2319, 2428
BstNI	CCWGG	4 cut(s)	381, 858, 1269, 2044
BstNSI	RCATGY	2 cut(s)	793, 917
BstPAI	GACNNNNGTC	1 cut(s)	2198
BstSCI	CCNGG	4 cut(s)	379, 856, 1267, 2042
BstSFI	CTRYAG	2 cut(s)	1302, 1861
BstSLI	GKGCMC	2 cut(s)	1176, 1523
BstUI	CGCG	2 cut(s)	963, 1592
BstV1I	GCAGC	6 cut(s)	1217, 1379, 1457, 2161, 2529, 2769
BstV2I	GAAGAC	3 cut(s)	792, 880, 1941
BstX2I	RGATCY	5 cut(s)	89, 1108, 1720, 2004, 2267
BstXI	CCANNNNNNTGG	3 cut(s)	1022, 1219, 1291
BstYI	RGATCY	5 cut(s)	89, 1108, 1720, 2004, 2267
Bsu36I	CCTNAGG	2 cut(s)	270, 417
BsuI	GTATCC	1 cut(s)	8
BsuRI	GGCC	3 cut(s)	535, 861, 2527
BtgI	CCRYGG	3 cut(s)	889, 1258, 1606
BtgZI	GCGATG	3 cut(s)	1563, 2031, 2446
BtsI	GCAGTG	1 cut(s)	2923
BtsIMutI	CAGTG	5 cut(s)	207, 341, 438, 2566, 2923
Cac8I	GCNNGC	2 cut(s)	795, 1713
CaiI	CAGNNNCTG	4 cut(s)	1658, 1700, 1946, 2546
Cfr13I	GGNCC	4 cut(s)	122, 1262, 1736, 2525
Csp6I	GTAC	3 cut(s)	956, 980, 1272
CspCI	CAANNNNNGTGG	8 cut(s)	2560, 2595, 2659, 2694, 2800, 2835, 2920, 2955
CviAII	CATG	7 cut(s)	790, 890, 914, 1259, 1285, 1666, 2407
CviQI	GTAC	3 cut(s)	956, 980, 1272
Eam1104I	CTCTTC	4 cut(s)	818, 1907, 2112, 2919
EarI	CTCTTC	4 cut(s)	818, 1907, 2112, 2919
EciI	GGCGGA	2 cut(s)	986, 2883
Ecl136II	GAGCTC	1 cut(s)	2569
Eco130I	CCWWGG	8 cut(s)	889, 1258, 1724, 2008, 2227, 2327, 2455, 2973
Eco147I	AGGCCT	1 cut(s)	535
Eco24I	GRGCYC	2 cut(s)	559, 2571
Eco32I	GATATC	1 cut(s)	2125
Eco47I	GGWCC	3 cut(s)	122, 1262, 1736
Eco53kI	GAGCTC	1 cut(s)	2569
Eco57I	CTGAAG	2 cut(s)	1635, 2217
Eco81I	CCTNAGG	2 cut(s)	270, 417
Eco88I	CYCGRG	2 cut(s)	779, 1335
EcoICRI	GAGCTC	1 cut(s)	2569
EcoRI	GAATTC	1 cut(s)	692
EcoRII	CCWGG	4 cut(s)	379, 856, 1267, 2042
EcoRV	GATATC	1 cut(s)	2125
EcoT14I	CCWWGG	8 cut(s)	889, 1258, 1724, 2008, 2227, 2327, 2455, 2973
EcoT22I	ATGCAT	1 cut(s)	919
EcoT38I	GRGCYC	2 cut(s)	559, 2571
ErhI	CCWWGG	8 cut(s)	889, 1258, 1724, 2008, 2227, 2327, 2455, 2973
FaeI	CATG	7 cut(s)	793, 893, 917, 1262, 1288, 1669, 2410
FalI	AAGNNNNNCTT	2 cut(s)	1772, 1804
FaqI	GGGAC	3 cut(s)	829, 2695, 2729
FatI	CATG	7 cut(s)	789, 889, 913, 1258, 1284, 1665, 2406
FauI	CCCGC	1 cut(s)	471
FauNDI	CATATG	5 cut(s)	919, 984, 1249, 1459, 2396
FbaI	TGATCA	2 cut(s)	1372, 2373
FriOI	GRGCYC	2 cut(s)	559, 2571
FspBI	CTAG	4 cut(s)	543, 1068, 1850, 2369
GsaI	CCCAGC	1 cut(s)	1026
GsuI	CTGGAG	2 cut(s)	1737, 2523
HaeIII	GGCC	3 cut(s)	535, 861, 2527
HapII	CCGG	1 cut(s)	1739
Hin1II	CATG	7 cut(s)	793, 893, 917, 1262, 1288, 1669, 2410
HincII	GTYRAC	2 cut(s)	454, 1563
HindII	GTYRAC	2 cut(s)	454, 1563
HindIII	AAGCTT	3 cut(s)	1533, 1647, 2420
HinfI	GANTC	8 cut(s)	200, 275, 314, 1059, 1540, 1763, 1879, 1943
HpaII	CCGG	1 cut(s)	1739
HphI	GGTGA	5 cut(s)	395, 1173, 2609, 2933, 2972
Hpy166II	GTNNAC	7 cut(s)	431, 454, 958, 1047, 1563, 1603, 2468
Hpy8I	GTNNAC	7 cut(s)	431, 454, 958, 1047, 1563, 1603, 2468
HpyCH4IV	ACGT	1 cut(s)	622
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1091, 1193, 1646, 2319, 2428
HpySE526I	ACGT	1 cut(s)	622
Hsp92II	CATG	7 cut(s)	793, 893, 917, 1262, 1288, 1669, 2410
Ksp22I	TGATCA	2 cut(s)	1372, 2373
LguI	GCTCTTC	1 cut(s)	1907
LmnI	GCTCC	4 cut(s)	562, 1238, 1357, 2770
Lsp1109I	GCAGC	6 cut(s)	1217, 1379, 1457, 2161, 2529, 2769
LweI	GCATC	9 cut(s)	269, 360, 1081, 1422, 1586, 1747, 1856, 2003, 2450
MaeI	CTAG	4 cut(s)	543, 1068, 1850, 2369
MaeII	ACGT	1 cut(s)	622
MaeIII	GTNAC	8 cut(s)	175, 383, 445, 1544, 1610, 1764, 1840, 2030
MbiI	CCGCTC	1 cut(s)	478
MfeI	CAATTG	1 cut(s)	1730
MflI	RGATCY	5 cut(s)	89, 1108, 1720, 2004, 2267
MhlI	GDGCHC	6 cut(s)	559, 1176, 1243, 1354, 1523, 2571
MluCI	AATT	9 cut(s)	654, 692, 770, 1467, 1509, 1730, 1834, 1982, 2222
MlyI	GAGTC	3 cut(s)	1534, 1772, 1937
MmeI	TCCRAC	3 cut(s)	163, 1086, 2882
Mph1103I	ATGCAT	1 cut(s)	919
MroXI	GAANNNNTTC	2 cut(s)	877, 1221
MseI	TTAA	8 cut(s)	153, 1191, 1470, 1508, 1587, 1961, 2093, 2337
MslI	CAYNNNNRTG	3 cut(s)	401, 918, 1217
MspA1I	CMGCKG	2 cut(s)	1022, 1370
MspI	CCGG	1 cut(s)	1739
MspR9I	CCNGG	4 cut(s)	381, 858, 1269, 2044
MunI	CAATTG	1 cut(s)	1730
Mva1269I	GAATGC	1 cut(s)	1447
MvaI	CCWGG	4 cut(s)	381, 858, 1269, 2044
MvnI	CGCG	2 cut(s)	963, 1592
MwoI	GCNNNNNNNGC	5 cut(s)	1091, 1193, 1646, 2319, 2428
NcoI	CCATGG	2 cut(s)	889, 1258
NdeI	CATATG	5 cut(s)	919, 984, 1249, 1459, 2396
NlaIII	CATG	7 cut(s)	793, 893, 917, 1262, 1288, 1669, 2410
NlaIV	GGNNCC	5 cut(s)	558, 1110, 1737, 2006, 2496
NmeAIII	GCCGAG	2 cut(s)	1749, 2812
NmuCI	GTSAC	3 cut(s)	383, 1610, 1764
NsiI	ATGCAT	1 cut(s)	919
NspI	RCATGY	2 cut(s)	793, 917
NspV	TTCGAA	1 cut(s)	308
PaeR7I	CTCGAG	1 cut(s)	779
PceI	AGGCCT	1 cut(s)	535
PciSI	GCTCTTC	1 cut(s)	1907
PcsI	WCGNNNNNNNCGW	1 cut(s)	2802
PctI	GAATGC	1 cut(s)	1447
PdmI	GAANNNNTTC	2 cut(s)	877, 1221
PfeI	GAWTC	5 cut(s)	200, 275, 314, 1059, 1879
PleI	GAGTC	3 cut(s)	1534, 1771, 1937
PpsI	GAGTC	3 cut(s)	1534, 1771, 1937
PshAI	GACNNNNGTC	1 cut(s)	2198
PsiI	TTATAA	1 cut(s)	2135
Psp124BI	GAGCTC	1 cut(s)	2571
Psp6I	CCWGG	4 cut(s)	379, 856, 1267, 2042
PspFI	CCCAGC	1 cut(s)	1022
PspGI	CCWGG	4 cut(s)	379, 856, 1267, 2042
PspN4I	GGNNCC	5 cut(s)	558, 1110, 1737, 2006, 2496
PspPI	GGNCC	4 cut(s)	122, 1262, 1736, 2525
PspXI	VCTCGAGB	1 cut(s)	779
PstNI	CAGNNNCTG	4 cut(s)	1658, 1700, 1946, 2546
PsuI	RGATCY	5 cut(s)	89, 1108, 1720, 2004, 2267
PvuII	CAGCTG	2 cut(s)	1022, 1370
RsaI	GTAC	3 cut(s)	957, 981, 1273
RsaNI	GTAC	3 cut(s)	956, 980, 1272
RseI	CAYNNNNRTG	3 cut(s)	401, 918, 1217
SacI	GAGCTC	1 cut(s)	2571
SapI	GCTCTTC	1 cut(s)	1907
SaqAI	TTAA	8 cut(s)	153, 1191, 1470, 1508, 1587, 1961, 2093, 2337
Sau96I	GGNCC	4 cut(s)	122, 1262, 1736, 2525
SchI	GAGTC	3 cut(s)	1534, 1772, 1937
ScrFI	CCNGG	4 cut(s)	381, 858, 1269, 2044
SduI	GDGCHC	6 cut(s)	559, 1176, 1243, 1354, 1523, 2571
SfaNI	GCATC	9 cut(s)	269, 360, 1081, 1422, 1586, 1747, 1856, 2003, 2450
SfcI	CTRYAG	2 cut(s)	1302, 1861
Sfr274I	CTCGAG	1 cut(s)	779
SfuI	TTCGAA	1 cut(s)	308
SinI	GGWCC	3 cut(s)	122, 1262, 1736
SlaI	CTCGAG	1 cut(s)	779
SmiMI	CAYNNNNRTG	3 cut(s)	401, 918, 1217
SmlI	CTYRAG	4 cut(s)	374, 779, 1750, 2778
SmoI	CTYRAG	4 cut(s)	374, 779, 1750, 2778
Sse9I	AATT	9 cut(s)	654, 692, 770, 1467, 1509, 1730, 1834, 1982, 2222
SseBI	AGGCCT	1 cut(s)	535
SspI	AATATT	1 cut(s)	35
SspMI	CTAG	4 cut(s)	543, 1068, 1850, 2369
SstI	GAGCTC	1 cut(s)	2571
StuI	AGGCCT	1 cut(s)	535
StyD4I	CCNGG	4 cut(s)	379, 856, 1267, 2042
StyI	CCWWGG	8 cut(s)	889, 1258, 1724, 2008, 2227, 2327, 2455, 2973
TaiI	ACGT	1 cut(s)	625
TaqI	TCGA	8 cut(s)	290, 308, 512, 681, 780, 849, 1057, 2292
TasI	AATT	9 cut(s)	654, 692, 770, 1467, 1509, 1730, 1834, 1982, 2222
TatI	WGTACW	2 cut(s)	955, 979
TauI	GCSGC	4 cut(s)	1097, 2631, 2730, 2916
TfiI	GAWTC	5 cut(s)	200, 275, 314, 1059, 1879
Tru1I	TTAA	8 cut(s)	153, 1191, 1470, 1508, 1587, 1961, 2093, 2337
Tru9I	TTAA	8 cut(s)	153, 1191, 1470, 1508, 1587, 1961, 2093, 2337
TscAI	CASTG	5 cut(s)	214, 341, 445, 2566, 2923
TseFI	GTSAC	3 cut(s)	383, 1610, 1764
TseI	GCWGC	6 cut(s)	1230, 1367, 1445, 2149, 2517, 2757
Tsp45I	GTSAC	3 cut(s)	383, 1610, 1764
TspGWI	ACGGA	1 cut(s)	2028
TspRI	CASTG	5 cut(s)	214, 341, 445, 2566, 2923
VpaK11BI	GGWCC	3 cut(s)	122, 1262, 1736
XapI	RAATTY	3 cut(s)	654, 692, 1982
XbaI	TCTAGA	1 cut(s)	542
XceI	RCATGY	2 cut(s)	793, 917
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1265, 1291, 2547
XhoI	CTCGAG	1 cut(s)	779
XmnI	GAANNNNTTC	2 cut(s)	877, 1221
XspI	CTAG	4 cut(s)	543, 1068, 1850, 2369
Zsp2I	ATGCAT	1 cut(s)	919

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.