Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0004411

Physical Location & Seq

Genomic Coordinates Forward (+)

19921090 .. 19925686

Gene Structure 4597 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g15972.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2724 bp

ATGGGTTCAATTGCTGGTAGGGCTGATGAAGAGTGCTCAGTCATTGGAGACAAAGGGGATATAGGGTTCATCGATTTCAATGATGATAAATCGGTTTGTAGTTACAACCCAGCTGAAGAGGGTCCGATTGTTATCTCAGTCCCATTCCCTTTGGTGGGTGGAAAGCAAGGTCAAAAGCCTCAATCAGTAGTTGTAGGAGAAACAGTTTCGGAGAAAATAACGATTGTGAACTCCACCCGTAAGCCAGTGGAGCTGTGGGGTGTCAAAATTTATGCCTCAACTCCAGAGGACTCTTTCACACTTTCTCTAATGGAGCCTCCAAAGAAAGGCTCTGGTGTAGAAGCCATTAGAGCCTTCCTCGAGTCTAATGCCCTTGAGGACAGAGTGCTGCAGCCAGGAGAAACTCTGCCTGTGTGGCTATCTTGCAAGCCCAAGGAAATTGGTGTGCACACGAGCGTTGTGCATTTTGAATTCGAGGAGTATCAGATTGAACGTGCTGTTTTTCTCTTGGCTGATGACAAGATCTCCCAATCTCTGGTCTCAACAAGACCATTCGAAAGACGTGCTAAGAAGAAACCAATTGTTGTGGATTGCTATGTACGGGCTGCAAGCGTTTCAAGAAGCACAGAACAGCGACCCTACAAAAACAGGCTTCCGCGATATGACCTTCCAAAGGAACATAGAGATTATCTATTGAGCGGGCAGGTTCCTGAATGCGTTACAGAAGGTCTTTTGAGGCGGAACTATGCTGATCACTTCAAGACTTTACTGATGATGGAAGAAATACAGTTAGAGGAAAGCATGAGAAGTTATGATATGGAACATGTTAATTTGAGGAGGAGGGGATATCGTTATTTGTCCCTTGAAGTCCCAGGACTGGCGGAGAGAAGGCCTTCACTTGTCCATGGCGATCATGTTTTTGCCAAGCTTTCTGAGTACGCAGATGACACAACATCTGATCCATATCAGGGTTACATTCACCGTGTGGAGGCTGATGAAGTTTACTTGAGGTTTGCAGATGAATTTCATGCAAACCACAGAGACGGTAATCTTTATCATGTGCAGTTCACATATAATCGAGTTTCCATGAGAAGGTTATATCAAGCCACTGATGCTGCTGCAGAGTTAGACACAGGGTTCCTATTTCCATCTGAGTCCCCTGAAAAAAGATGGATTAACAGCCCAAAACTGGTCCCTGCACCTTCTTGCAGACTTAATGAAGAGCAAATGCGTGCAGTTCAGATGGTCCTTGGCTGCAAAGGAGGACCACCTTTTGTGATTCATGGTCCTCCTGGCACAGGCAAGACAATGACATTAGTGGAAGCAGTCCTCCAACTCTACAAAAGGAAAGCAAAAGCTCGAATTCTCATTTGTGCACCTTCAAATAGTGCAGCAGACCACGTCCTGGAGAAACTCCTCAATGAAAAGGCTGATGTAGTAATTAAAAAGAATGAAATATTCAGGCTCAATGCACCTTCCCGTCCTCTTGAAGATATCAAGCCTGAGTATATTAAATTTTGCTTCTCTAATGACGACAATATCTTCAGCTGTCCTCCACCCAAAGCCCTCAGGCGCTATAGGATCATCATATCAACCTATATGAGTGCCTCTCTTCTTTATGCAGAAGATATTGAAAAAGGCCATTTTTCTCATATTTTCTTGGATGAGGCAGGACAAGCTTCAGAACCAGAAACCATGATCCCGGTAGCAAATCTGCATGAGAGGAATACAGTGGTTGTTCTTGCTGGAGACCCTATGCAATTAGGGCCGATCATAAACTCCCAGCAAGCAGAAGAATATTGTTTGGGGATATCATACTTGGAGAGGATGTTTGATTGTGAATTTTATAGAAATGGGGATAACAGTTACGTGACAAAGTTGGTTAGGAATTACAGATGTCACCCAGACATTTTGCACCTCCCCAATGAGTTATTTTATGGAGGAGAGTTGAAAGCTTGTAAAGATGACTCGGTCTCCATCACCGCAGGGCTGGACCTTCTTCCTAATAAAGACTTCCCTGTGGTTTTCTTTGGCATTCAAGGCTGTGATGAGAGGGAAGGAAATAATCCATCATGGTTTAATAGGACTGAGGCTAGTAAGGTAGTGGAGGTCACCAAGAGATTGACTGCAGGAAAGAACTTGAGTGAAGAAGATATAGGGGTCATAACTCCTTACCGACAGCAAGTGCTGAAACTGAAGAAAGCTTTTGAAAATTTGGACATGCCTGATATCAAGGTTGGAAGTGTTGAGCAGTTTCAGGGACAAGAGAGGGAAGTTATCATAATATCAACTGTCCGATCAACAATCAAGCACAATGAATTTGACAGAACATACTGTTTGGGATTTCTGAGCAATCCAAAACGGTTTAATGTGGCTATAACTCGTGCCAAATCTTTGCTGATTATAATTGGGAACCCACATATTATCAGCAAGGATTTCAACTGGAATAAGCTTCTGTGGCGCTGTGTAGACAACAATTCCTATCAGGGTTGTAATCTCCCTGTCAGGCAGGAGGAAAATTATTATGAGAACCCAACACATGAAGATGACTGGGACAACAATGGAGAAAACACTCAGTTCTCTAGAACTGATTCGTGGGTTCAAGGGTCGTGGGAAGCAGAAGCTGCACAACCTCTCCAGGACAGAGATGAAGCTGGACAGTTGCTGGAAACAGAAGTTCCCCCGCCTGTTGATGAATCTGAATGGTCTGATGGCTGGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002252 GO:0002376 GO:0003674 GO:0003724 GO:0003824 GO:0004386 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0009605 GO:0009607 GO:0009615 GO:0009616 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0016441 GO:0016458 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0019222 GO:0031047 GO:0035194 GO:0035821 GO:0040029 GO:0043207 GO:0044003 GO:0044403 GO:0044419 GO:0045087 GO:0048519 GO:0050789 GO:0050896 GO:0051607 GO:0051701 GO:0051704 GO:0051707 GO:0051817 GO:0052018 GO:0052249 GO:0060255 GO:0065007 GO:0098542 GO:0098586 GO:0140098

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA_11 AAA_12

Protein Analysis

908

Amino Acids

103.11

Weight (kDa)

5.43

Isoelectric Point (pI)

46.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MOV-10_beta-barrel	PF21634	271 - 356	2.7e-31	Helicase MOV-10, beta-barrel domain
ResIII	PF04851	404 - 575	7.1e-08	Type III restriction enzyme, res subunit
AAA_11	PF13086	405 - 500	1.4e-20	AAA domain
AAA_30	PF13604	405 - 593	5.3e-13	AAA domain
AAA_19	PF13245	423 - 590	3.9e-09	AAA domain
AAA_11	PF13086	521 - 594	6.6e-12	AAA domain
AAA_12	PF13087	605 - 806	8.7e-51	AAA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004411)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05460 AT1G05460
fragaria_vesca	FvH4_4g15972 FvH4_4g15972 FvH4_4g15972 FvH4_4g15972 FvH4_4g15972 FvH4_4g15972 FvH4_4g15972
malus_domestica	MD13G1196500.v1.1
prunus_persica	Prupe.1G017300_v2.0.a1 Prupe.1G017300_v2.0.a1 Prupe.1G017300_v2.0.a1 Prupe.1G017300_v2.0.a1 Prupe.1G017300_v2.0.a1 Prupe.1G017300_v2.0.a1
pyrus_communis	pycom13g16860
rosa_chinensis	RchiOBHm_Chr4g0415581
rosa_laevigata	RLG00000008062
rosa_multiflora	Rmu_sc0004599.1_g000006
rosa_roxburghii	Rroxscaffold_5G00359390
rosa_rugosa	Rorug04G0134800 Rorug04G0134900 Rorug04G0135000 Rorug04G0135100 Rorug04G0135200 Rorug04G0135300
rosa_samantha	Rh4AG196200 Rh4BG194900 Rh4CG206900 Rh4DG193800
rosa_wichuraiana	Rw4G016680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2405
Acc36I	ACCTGC	1 cut(s)	694
AccB7I	CCANNNNNTGG	2 cut(s)	535, 1405
AccBSI	CCGCTC	1 cut(s)	699
AccI	GTMKAC	1 cut(s)	2469
AccII	CGCG	1 cut(s)	658
AciI	CCGC	6 cut(s)	656, 699, 739, 881, 1983, 2684
AclWI	GGATC	3 cut(s)	953, 1589, 1693
AcsI	RAATTY	8 cut(s)	267, 470, 1022, 1362, 1514, 1841, 2212, 2318
AcuI	CTGAAG	4 cut(s)	135, 1528, 1665, 2216
AdeI	CACNNNGTG	1 cut(s)	985
AfaI	GTAC	2 cut(s)	600, 938
AflIII	ACRYGT	1 cut(s)	823
AjiI	CACGTC	2 cut(s)	563, 1402
AjnI	CCWGG	5 cut(s)	394, 871, 1291, 1404, 2637
AloI	GAACNNNNNNTCC	2 cut(s)	50, 82
Alw21I	GWGCWC	3 cut(s)	38, 450, 1378
Alw26I	GTCTC	5 cut(s)	42, 544, 1035, 1743, 1978
Alw44I	GTGCAC	2 cut(s)	446, 1374
AlwI	GGATC	3 cut(s)	953, 1589, 1693
AlwNI	CAGNNNCTG	2 cut(s)	2624, 2665
Ama87I	CYCGRG	1 cut(s)	359
AoxI	GGCC	3 cut(s)	890, 1639, 1766
ApaLI	GTGCAC	2 cut(s)	446, 1374
ApeKI	GCWGC	8 cut(s)	388, 391, 605, 1115, 1118, 1254, 1391, 2624
ApoI	RAATTY	8 cut(s)	267, 470, 1022, 1362, 1514, 1841, 2212, 2318
Asp700I	GAANNNNTTC	2 cut(s)	892, 2590
AspLEI	GCGC	2 cut(s)	1575, 2463
AspS9I	GGNCC	7 cut(s)	122, 1192, 1246, 1265, 1286, 1766, 1993
AsuC2I	CCSGG	1 cut(s)	1703
AsuHPI	GGTGA	4 cut(s)	971, 1892, 1972, 2104
AsuII	TTCGAA	1 cut(s)	555
AvaI	CYCGRG	1 cut(s)	359
AvaII	GGWCC	6 cut(s)	122, 1192, 1246, 1265, 1286, 1993
AxyI	CCTNAGG	1 cut(s)	1568
BaeGI	GKGCMC	2 cut(s)	450, 1378
BauI	CACGAG	2 cut(s)	451, 2382
Bbv12I	GWGCWC	3 cut(s)	38, 450, 1378
BbvI	GCAGC	8 cut(s)	375, 403, 592, 1102, 1105, 1241, 1403, 2611
BccI	CCATC	7 cut(s)	769, 1156, 1164, 1237, 1985, 2077, 2705
BcgI	CGANNNNNNTGC	6 cut(s)	350, 384, 442, 476, 545, 579
BciT130I	CCWGG	5 cut(s)	396, 873, 1293, 1406, 2639
BclI	TGATCA	1 cut(s)	751
BcnI	CCSGG	1 cut(s)	1703
BcoDI	GTCTC	5 cut(s)	42, 544, 1035, 1743, 1978
BfaI	CTAG	2 cut(s)	2094, 2583
BfmI	CTRYAG	4 cut(s)	389, 1119, 1576, 2127
BfoI	RGCGCY	2 cut(s)	1576, 2464
BfuAI	ACCTGC	1 cut(s)	694
BglI	GCCNNNNNGGC	1 cut(s)	415
BglII	AGATCT	1 cut(s)	522
BisI	GCNGC	8 cut(s)	389, 392, 606, 1116, 1119, 1255, 1392, 2625
BlsI	GCNGC	8 cut(s)	390, 393, 607, 1117, 1120, 1256, 1393, 2626
Bme1390I	CCNGG	6 cut(s)	396, 873, 1293, 1406, 1703, 2639
Bme18I	GGWCC	6 cut(s)	122, 1192, 1246, 1265, 1286, 1993
BmeT110I	CYCGRG	1 cut(s)	359
BmgBI	CACGTC	2 cut(s)	563, 1402
BmgT120I	GGNCC	7 cut(s)	122, 1192, 1246, 1265, 1286, 1766, 1993
BmiI	GGNNCC	6 cut(s)	123, 315, 708, 1139, 1194, 2414
BmrFI	CCNGG	6 cut(s)	396, 873, 1293, 1406, 1703, 2639
BmrI	ACTGGG	1 cut(s)	2560
BmsI	GCATC	1 cut(s)	1102
BmuI	ACTGGG	1 cut(s)	2560
BplI	GAGNNNNNCTC	4 cut(s)	342, 374, 1594, 1626
BpmI	CTGGAG	4 cut(s)	267, 1427, 1767, 2621
Bpu14I	TTCGAA	1 cut(s)	555
BpuEI	CTTGAG	3 cut(s)	395, 1027, 2161
BpuMI	CCSGG	1 cut(s)	1703
Bsa29I	ATCGAT	1 cut(s)	72
BsaAI	YACGTR	1 cut(s)	1870
BsaBI	GATNNNNATC	2 cut(s)	131, 963
BsaI	GGTCTC	3 cut(s)	544, 1743, 1978
BsaJI	CCNNGG	4 cut(s)	432, 871, 904, 1249
Bse1I	ACTGG	5 cut(s)	245, 882, 1194, 2447, 2555
Bse21I	CCTNAGG	1 cut(s)	1568
Bse8I	GATNNNNATC	2 cut(s)	131, 963
BseBI	CCWGG	5 cut(s)	396, 873, 1293, 1406, 2639
BseCI	ATCGAT	1 cut(s)	72
BseDI	CCNNGG	4 cut(s)	432, 871, 904, 1249
BseGI	GGATG	2 cut(s)	1669, 1833
BseJI	GATNNNNATC	2 cut(s)	131, 963
BseMII	CTCAG	9 cut(s)	51, 150, 924, 1143, 1494, 1582, 2079, 2339, 2588
BseNI	ACTGG	5 cut(s)	245, 882, 1194, 2447, 2555
BseRI	GAGGAG	5 cut(s)	491, 850, 853, 1406, 1956
BseSI	GKGCMC	2 cut(s)	450, 1378
BseXI	GCAGC	8 cut(s)	375, 403, 592, 1102, 1105, 1241, 1403, 2611
BseYI	CCCAGC	2 cut(s)	109, 1782
BsgI	GTGCAG	5 cut(s)	1082, 1182, 1254, 1410, 2610
Bsh1236I	CGCG	1 cut(s)	658
BshFI	GGCC	3 cut(s)	892, 1641, 1768
BshVI	ATCGAT	1 cut(s)	72
BsiHKAI	GWGCWC	3 cut(s)	38, 450, 1378
BsiHKCI	CYCGRG	1 cut(s)	359
BsiSI	CCGG	1 cut(s)	1703
BslFI	GGGAC	7 cut(s)	125, 844, 854, 1141, 1178, 2274, 2567
BsmAI	GTCTC	5 cut(s)	42, 544, 1035, 1743, 1978
BsmBI	CGTCTC	1 cut(s)	1035
BsmFI	GGGAC	7 cut(s)	125, 844, 854, 1141, 1178, 2274, 2567
BsmI	GAATGC	2 cut(s)	719, 2034
BsnI	GGCC	3 cut(s)	892, 1641, 1768
Bso31I	GGTCTC	3 cut(s)	544, 1743, 1978
BsoBI	CYCGRG	1 cut(s)	359
Bsp119I	TTCGAA	1 cut(s)	555
Bsp1286I	GDGCHC	3 cut(s)	38, 450, 1378
Bsp143I	GATC	8 cut(s)	522, 751, 910, 958, 1581, 1698, 1770, 2297
Bsp19I	CCATGG	1 cut(s)	904
BspACI	CCGC	6 cut(s)	656, 699, 739, 881, 1983, 2684
BspANI	GGCC	3 cut(s)	892, 1641, 1768
BspCNI	CTCAG	9 cut(s)	50, 149, 925, 1144, 1495, 1581, 2080, 2340, 2587
BspDI	ATCGAT	1 cut(s)	72
BspFNI	CGCG	1 cut(s)	658
BspLI	GGNNCC	6 cut(s)	123, 315, 708, 1139, 1194, 2414
BspMAI	CTGCAG	3 cut(s)	393, 1123, 2131
BspMI	ACCTGC	1 cut(s)	694
BspPI	GGATC	3 cut(s)	953, 1589, 1693
BspQI	GCTCTTC	1 cut(s)	1215
BspT104I	TTCGAA	1 cut(s)	555
BspTNI	GGTCTC	3 cut(s)	544, 1743, 1978
BsrBI	CCGCTC	1 cut(s)	699
BsrI	ACTGG	5 cut(s)	245, 882, 1194, 2447, 2555
BssECI	CCNNGG	4 cut(s)	432, 871, 904, 1249
BssMI	GATC	8 cut(s)	522, 751, 910, 958, 1581, 1698, 1770, 2297
BssSI	CACGAG	2 cut(s)	451, 2382
BssT1I	CCWWGG	3 cut(s)	432, 904, 1249
Bst2BI	CACGAG	2 cut(s)	451, 2382
Bst2UI	CCWGG	5 cut(s)	396, 873, 1293, 1406, 2639
Bst6I	CTCTTC	4 cut(s)	24, 111, 1215, 1617
BstAPI	GCANNNNNTGC	1 cut(s)	2624
BstBAI	YACGTR	1 cut(s)	1870
BstBI	TTCGAA	1 cut(s)	555
BstC8I	GCNNGC	5 cut(s)	428, 610, 701, 1233, 1788
BstDSI	CCRYGG	1 cut(s)	904
BstEII	GGTNACC	1 cut(s)	2110
BstENI	CCTNNNNNAGG	2 cut(s)	671, 1296
BstF5I	GGATG	2 cut(s)	1669, 1833
BstFNI	CGCG	1 cut(s)	658
BstH2I	RGCGCY	2 cut(s)	1576, 2464
BstHHI	GCGC	2 cut(s)	1575, 2463
BstKTI	GATC	8 cut(s)	525, 754, 913, 961, 1584, 1701, 1773, 2300
BstMAI	GTCTC	5 cut(s)	42, 544, 1035, 1743, 1978
BstMBI	GATC	8 cut(s)	522, 751, 910, 958, 1581, 1698, 1770, 2297
BstNI	CCWGG	5 cut(s)	396, 873, 1293, 1406, 2639
BstNSI	RCATGY	2 cut(s)	827, 2224
BstPI	GGTNACC	1 cut(s)	2110
BstSCI	CCNGG	6 cut(s)	394, 871, 1291, 1404, 1701, 2637
BstSFI	CTRYAG	4 cut(s)	389, 1119, 1576, 2127
BstSLI	GKGCMC	2 cut(s)	450, 1378
BstUI	CGCG	1 cut(s)	658
BstV1I	GCAGC	8 cut(s)	375, 403, 592, 1102, 1105, 1241, 1403, 2611
BstX2I	RGATCY	1 cut(s)	522
BstYI	RGATCY	1 cut(s)	522
Bsu15I	ATCGAT	1 cut(s)	72
Bsu36I	CCTNAGG	1 cut(s)	1568
BsuRI	GGCC	3 cut(s)	892, 1641, 1768
BsuTUI	ATCGAT	1 cut(s)	72
BtgI	CCRYGG	1 cut(s)	904
BtrI	CACGTC	2 cut(s)	563, 1402
BtsCI	GGATG	2 cut(s)	1669, 1833
BtsIMutI	CAGTG	3 cut(s)	252, 1107, 1737
BveI	ACCTGC	1 cut(s)	694
Cac8I	GCNNGC	5 cut(s)	428, 610, 701, 1233, 1788
CaiI	CAGNNNCTG	2 cut(s)	2624, 2665
CfoI	GCGC	2 cut(s)	1575, 2463
Cfr13I	GGNCC	7 cut(s)	122, 1192, 1246, 1265, 1286, 1766, 1993
ClaI	ATCGAT	1 cut(s)	72
Csp6I	GTAC	2 cut(s)	599, 937
CspCI	CAANNNNNGTGG	4 cut(s)	567, 602, 2591, 2626
CviQI	GTAC	2 cut(s)	599, 937
DpnI	GATC	8 cut(s)	524, 753, 912, 960, 1583, 1700, 1772, 2299
DpnII	GATC	8 cut(s)	522, 751, 910, 958, 1581, 1698, 1770, 2297
DraIII	CACNNNGTG	1 cut(s)	985
Eam1104I	CTCTTC	4 cut(s)	24, 111, 1215, 1617
EarI	CTCTTC	4 cut(s)	24, 111, 1215, 1617
EciI	GGCGGA	2 cut(s)	754, 896
Eco130I	CCWWGG	3 cut(s)	432, 904, 1249
Eco147I	AGGCCT	1 cut(s)	892
Eco31I	GGTCTC	3 cut(s)	544, 1743, 1978
Eco32I	GATATC	4 cut(s)	848, 1495, 1812, 2230
Eco47I	GGWCC	6 cut(s)	122, 1192, 1246, 1265, 1286, 1993
Eco57I	CTGAAG	4 cut(s)	135, 1528, 1665, 2216
Eco81I	CCTNAGG	1 cut(s)	1568
Eco88I	CYCGRG	1 cut(s)	359
Eco91I	GGTNACC	1 cut(s)	2110
EcoNI	CCTNNNNNAGG	2 cut(s)	671, 1296
EcoO65I	GGTNACC	1 cut(s)	2110
EcoRI	GAATTC	2 cut(s)	470, 1362
EcoRII	CCWGG	5 cut(s)	394, 871, 1291, 1404, 2637
EcoRV	GATATC	4 cut(s)	848, 1495, 1812, 2230
EcoT14I	CCWWGG	3 cut(s)	432, 904, 1249
ErhI	CCWWGG	3 cut(s)	432, 904, 1249
Esp3I	CGTCTC	1 cut(s)	1035
FaqI	GGGAC	7 cut(s)	125, 844, 854, 1141, 1178, 2274, 2567
FauI	CCCGC	2 cut(s)	692, 2691
FbaI	TGATCA	1 cut(s)	751
FblI	GTMKAC	1 cut(s)	2469
Fnu4HI	GCNGC	8 cut(s)	389, 392, 606, 1116, 1119, 1255, 1392, 2625
FokI	GGATG	2 cut(s)	1676, 1840
Fsp4HI	GCNGC	8 cut(s)	389, 392, 606, 1116, 1119, 1255, 1392, 2625
FspBI	CTAG	2 cut(s)	2094, 2583
GlaI	GCGC	2 cut(s)	1574, 2462
GluI	GCNGC	8 cut(s)	389, 392, 606, 1116, 1119, 1255, 1392, 2625
GsaI	CCCAGC	2 cut(s)	113, 1786
GsuI	CTGGAG	4 cut(s)	267, 1427, 1767, 2621
HaeII	RGCGCY	2 cut(s)	1576, 2464
HaeIII	GGCC	3 cut(s)	892, 1641, 1768
HapII	CCGG	1 cut(s)	1703
HhaI	GCGC	2 cut(s)	1575, 2463
Hin6I	GCGC	2 cut(s)	1573, 2461
HinP1I	GCGC	2 cut(s)	1573, 2461
HindIII	AAGCTT	5 cut(s)	926, 1677, 1953, 2202, 2450
HinfI	GANTC	7 cut(s)	290, 362, 1154, 1279, 1967, 2591, 2696
HpaII	CCGG	1 cut(s)	1703
HphI	GGTGA	4 cut(s)	971, 1892, 1972, 2104
Hpy166II	GTNNAC	6 cut(s)	229, 448, 1003, 1068, 1376, 2470
Hpy188III	TCNNGA	6 cut(s)	284, 618, 710, 760, 1487, 2583
Hpy8I	GTNNAC	6 cut(s)	229, 448, 1003, 1068, 1376, 2470
HpyCH4IV	ACGT	4 cut(s)	493, 562, 1401, 1869
HpySE526I	ACGT	4 cut(s)	493, 562, 1401, 1869
HspAI	GCGC	2 cut(s)	1573, 2461
Ksp22I	TGATCA	1 cut(s)	751
Kzo9I	GATC	8 cut(s)	522, 751, 910, 958, 1581, 1698, 1770, 2297
LguI	GCTCTTC	1 cut(s)	1215
LmnI	GCTCC	2 cut(s)	250, 313
Lsp1109I	GCAGC	8 cut(s)	375, 403, 592, 1102, 1105, 1241, 1403, 2611
LweI	GCATC	1 cut(s)	1102
MaeI	CTAG	2 cut(s)	2094, 2583
MaeII	ACGT	4 cut(s)	493, 562, 1401, 1869
MaeIII	GTNAC	7 cut(s)	101, 718, 971, 1865, 1870, 1898, 2110
MalI	GATC	8 cut(s)	524, 753, 912, 960, 1583, 1700, 1772, 2299
MbiI	CCGCTC	1 cut(s)	699
MboI	GATC	8 cut(s)	522, 751, 910, 958, 1581, 1698, 1770, 2297
MfeI	CAATTG	2 cut(s)	9, 579
MflI	RGATCY	1 cut(s)	522
MhlI	GDGCHC	3 cut(s)	38, 450, 1378
MlyI	GAGTC	4 cut(s)	284, 371, 1163, 1961
MmeI	TCCRAC	2 cut(s)	1357, 2218
MroXI	GAANNNNTTC	2 cut(s)	892, 2590
MseI	TTAA	7 cut(s)	828, 1176, 1215, 1443, 1512, 2079, 2367
MslI	CAYNNNNRTG	1 cut(s)	2544
MspA1I	CMGCKG	2 cut(s)	113, 1548
MspI	CCGG	1 cut(s)	1703
MspR9I	CCNGG	6 cut(s)	396, 873, 1293, 1406, 1703, 2639
MunI	CAATTG	2 cut(s)	9, 579
Mva1269I	GAATGC	2 cut(s)	719, 2034
MvaI	CCWGG	5 cut(s)	396, 873, 1293, 1406, 2639
MvnI	CGCG	1 cut(s)	658
NciI	CCSGG	1 cut(s)	1703
NcoI	CCATGG	1 cut(s)	904
NdeII	GATC	8 cut(s)	522, 751, 910, 958, 1581, 1698, 1770, 2297
NlaIV	GGNNCC	6 cut(s)	123, 315, 708, 1139, 1194, 2414
NmuCI	GTSAC	3 cut(s)	1870, 1898, 2110
NspI	RCATGY	2 cut(s)	827, 2224
NspV	TTCGAA	1 cut(s)	555
PaeR7I	CTCGAG	1 cut(s)	359
PceI	AGGCCT	1 cut(s)	892
PciI	ACATGT	1 cut(s)	823
PciSI	GCTCTTC	1 cut(s)	1215
PctI	GAATGC	2 cut(s)	719, 2034
PdmI	GAANNNNTTC	2 cut(s)	892, 2590
PfeI	GAWTC	3 cut(s)	1279, 2591, 2696
PflFI	GACNNNGTC	2 cut(s)	1400, 1970
PflMI	CCANNNNNTGG	2 cut(s)	535, 1405
PfoI	TCCNGGA	2 cut(s)	1404, 2637
PkrI	GCNGC	8 cut(s)	390, 393, 607, 1117, 1120, 1256, 1393, 2626
PleI	GAGTC	4 cut(s)	284, 370, 1162, 1961
PpsI	GAGTC	4 cut(s)	284, 370, 1162, 1961
Ppu21I	YACGTR	1 cut(s)	1870
PscI	ACATGT	1 cut(s)	823
PsiI	TTATAA	1 cut(s)	2405
Psp6I	CCWGG	5 cut(s)	394, 871, 1291, 1404, 2637
PspEI	GGTNACC	1 cut(s)	2110
PspFI	CCCAGC	2 cut(s)	109, 1782
PspGI	CCWGG	5 cut(s)	394, 871, 1291, 1404, 2637
PspN4I	GGNNCC	6 cut(s)	123, 315, 708, 1139, 1194, 2414
PspPI	GGNCC	7 cut(s)	122, 1192, 1246, 1265, 1286, 1766, 1993
PspXI	VCTCGAGB	1 cut(s)	359
PstI	CTGCAG	3 cut(s)	393, 1123, 2131
PstNI	CAGNNNCTG	2 cut(s)	2624, 2665
PsuI	RGATCY	1 cut(s)	522
PsyI	GACNNNGTC	2 cut(s)	1400, 1970
PvuII	CAGCTG	2 cut(s)	113, 1548
RsaI	GTAC	2 cut(s)	600, 938
RsaNI	GTAC	2 cut(s)	599, 937
RseI	CAYNNNNRTG	1 cut(s)	2544
SapI	GCTCTTC	1 cut(s)	1215
SaqAI	TTAA	7 cut(s)	828, 1176, 1215, 1443, 1512, 2079, 2367
SatI	GCNGC	8 cut(s)	389, 392, 606, 1116, 1119, 1255, 1392, 2625
Sau3AI	GATC	8 cut(s)	522, 751, 910, 958, 1581, 1698, 1770, 2297
Sau96I	GGNCC	7 cut(s)	122, 1192, 1246, 1265, 1286, 1766, 1993
SchI	GAGTC	4 cut(s)	284, 371, 1163, 1961
ScrFI	CCNGG	6 cut(s)	396, 873, 1293, 1406, 1703, 2639
SduI	GDGCHC	3 cut(s)	38, 450, 1378
SfaNI	GCATC	1 cut(s)	1102
SfcI	CTRYAG	4 cut(s)	389, 1119, 1576, 2127
Sfr274I	CTCGAG	1 cut(s)	359
SfuI	TTCGAA	1 cut(s)	555
SinI	GGWCC	6 cut(s)	122, 1192, 1246, 1265, 1286, 1993
SlaI	CTCGAG	1 cut(s)	359
SmiMI	CAYNNNNRTG	1 cut(s)	2544
SmlI	CTYRAG	4 cut(s)	359, 374, 1006, 2140
SmoI	CTYRAG	4 cut(s)	359, 374, 1006, 2140
SseBI	AGGCCT	1 cut(s)	892
SsiI	CCGC	6 cut(s)	656, 699, 739, 881, 1983, 2684
SspI	AATATT	2 cut(s)	1458, 1799
SspMI	CTAG	2 cut(s)	2094, 2583
StuI	AGGCCT	1 cut(s)	892
StyD4I	CCNGG	6 cut(s)	394, 871, 1291, 1404, 1701, 2637
StyI	CCWWGG	3 cut(s)	432, 904, 1249
TaiI	ACGT	4 cut(s)	496, 565, 1404, 1872
TaqI	TCGA	6 cut(s)	72, 360, 474, 555, 1078, 1360
TaqII	GACCGA	1 cut(s)	1960
TfiI	GAWTC	3 cut(s)	1279, 2591, 2696
Tru1I	TTAA	7 cut(s)	828, 1176, 1215, 1443, 1512, 2079, 2367
Tru9I	TTAA	7 cut(s)	828, 1176, 1215, 1443, 1512, 2079, 2367
TscAI	CASTG	3 cut(s)	252, 1114, 1737
TseFI	GTSAC	3 cut(s)	1870, 1898, 2110
TseI	GCWGC	8 cut(s)	388, 391, 605, 1115, 1118, 1254, 1391, 2624
Tsp45I	GTSAC	3 cut(s)	1870, 1898, 2110
TspRI	CASTG	3 cut(s)	252, 1114, 1737
Tth111I	GACNNNGTC	2 cut(s)	1400, 1970
Van91I	CCANNNNNTGG	2 cut(s)	535, 1405
VneI	GTGCAC	2 cut(s)	446, 1374
VpaK11BI	GGWCC	6 cut(s)	122, 1192, 1246, 1265, 1286, 1993
XagI	CCTNNNNNAGG	2 cut(s)	671, 1296
XapI	RAATTY	8 cut(s)	267, 470, 1022, 1362, 1514, 1841, 2212, 2318
XbaI	TCTAGA	1 cut(s)	2582
XceI	RCATGY	2 cut(s)	827, 2224
XcmI	CCANNNNNNNNNTGG	1 cut(s)	252
XhoI	CTCGAG	1 cut(s)	359
XmiI	GTMKAC	1 cut(s)	2469
XmnI	GAANNNNTTC	2 cut(s)	892, 2590
XspI	CTAG	2 cut(s)	2094, 2583

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.