Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0004411

Physical Location & Seq

Genomic Coordinates Forward (+)

37958642 .. 37963049

Gene Structure 4408 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G016680.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2739 bp

ATGATGAGTACAATTGGGGGTAAGTGGGATGATGATGAGTGCTCTGTCATTGGAGACAAAGGGGATATCGGGTTCATCGATTTCAAAGATGACAAATCGGTTTGTAGTTACAACCCAGCTGAAGAGGGTCCGATTGTTATTTCAGTCCCATTCCCTCTTGTGGGAGGAAAGCAAGGTCAAAAACCTCGATCAGTAGTTGTAGGAGAAACAGTTTCGGATAAAATAACAATTGAGAACACCACCCGTAAGCCAGTGGAGCTATGGGGTGTTAAAATTTATGCCTCAACTCCAGATGACTCTTTCACACTTTCTCTGATGGAGCCTCCAAAGAAAGACTCTGGTGTAGAGGCCATTAGAGCCTTCCTCGAGTCTGCTTCCCTCGAGGACAGAGTGCTGCAACCAGGAGACACTTTGACTGTGTGGCTGTCTTGCAAGCCCAAGGAAATTGGTATGCACACCAGCGTTGTGCAGTTTGATTTCGAGGATAATCAGATTGAACGTGCTGTTTTTCTCTTGGCTGATGACAAAATCTCCCAATCTCTGGCCTCAACAAGACCATTCGAAAGACGCACTAAAAAGAAACCAATTGTTGTGGATTCCTATCATGTGGCTGTAAGCCCTAGTAGAAAAACAAAACGCCTACCCTACAAAAATAGGCTTCCGCGATATGACATTCCAAAGGAACTTAGGGATTACCTCTTGAGCGGGCACGATCCTGAATGTGTTACAGAAGGTCTTAAGAGGCGGAACTATGCTGATCACTTCAAGACTTTACTGATGATGGAGGAAATACAGTTAGAGGAAAGCATGAGAAGTTATGATATGGAATATGTTAGTTTGAGGAGGAGGGGATATCATTATTTGTCCCTTGAAGTCCCAGGGCTTGCTGAGAGAAGGCCTTCACTTGTCCAAGGGGATCATGTTTTCGCCAAGCTTTCTGAGTATGCAGATGACACAACACTTAATCCATATCAGGGTTTCATTCACCATGTAGAGGCTGATGAAGTTTACTTGAAGTTTGCGCAAGATTTTCACAGTGACCACAGAGACGGTAATCTTTATAATGTGCAATTCACATATAATCGAGTTTCCATGAGAAGGTTATATCAAGCGACTGATGCTGCTGCAGAGTTAGACAGAGGGTTCCTATTTCCATCTGAGTCCCCTCAAAGATGGATTAAAGCCCCAACACTGTACCCTATACCTTCTTGTAGACTTAATGAAGAGCAGATGCGTGCAGTTGAGATGATCCTTGGCTGCAAAGGAGGACCCAAAGGAGGACCACCTTATGTGATTCATGGACCTCCTGGCACAGGCAAGACAATGACAATAGTGGAAGCAATCCTCCAACTCTACAAAAGTCAACCAAAAGCTCGAGTTCTTGTTTGTGCACCTTCAAATAGTGCAGCAGACCACATCCTCGAGAAACTCCTCAATGAAAAGGCTGACGTAGTAGTTAAAGAACATGAAATATTCAGGCTTAATGCACCTACCCGTCCTTATGAAGATATCAAGCCTGATTATATTAAATTTTGCTCCTTCGAGGACAATATCTTCAACTGTCCTCCACCCAAAGCCCTCAGGCGCTATAGGATCATCATATCAACCTATATGAGTGCCGCTCTTCTTTATTTAGAAGGTATCGAAAAAGGCCACTTCTCTCATATTTTCTTGGATGAGGCAGGACAAGCTTCAGAACCAGAAACCATGATCCCAGTAGCTAGTCTGCATGATAGGAATACAGTTGTTGTTCTTGCTGGAGACCCTATGCAATTAGGGCCGATCATAAACTCCAAGAAAGCAGAAGATTACTATTTGGGGATATCATACTTGGAGAGGATGTTCGACTGTGAATTTTATAGAAATGAAGATTACAGTTACGTGACAAAGTTGGTTAGAAATTACAGATGTCACCCAGACATTTTGCATCTCCCCAATGAGTTATTCTATGGAGGAGAGTTGATTGCTTGTAAAGATGACTCAGTTTCCATCATTACAAGGCTGGACTTTCTTCCGAATAAGGACTTCCCCGTGGTTTTCTTTGGCATTCAAGGTTGTGATGAGAGGGAAGGAAACAATCCATCATGGTTTAACCGGACTGAAGCTAGTAAGGTAGTGGAGGTCACTAAGAGATTGACTGCAGGAAAGAACCTGAGTGAAGAAGATATTGGGGTTATAACTCCTTACCGACAGCAAGTGCTCAAAGTGAAGAAAGCTTTTGAAGATTTGGACATGCCTGACATCAAGGTTGGAAGTGTCGAGCAGTTTCAGGGACAGGAGAGGGAAGTTATCATAATATCAACTGTGCGATCAACAATCAAGCACAATGAATTTGACAGAACATACTGTTTGGGATTTCTGAGCAATCCAAAACGGTTTAATGTGGCTATTACTCGTGCCAAATCTTTGCTGATTATAATTGGGAACCCACATATTATCAGCAAGGATCCCAACTGGAATAAGCTTCTGTGGCGCTGTGTAGACAACAATTCCTATCAGGGTTGTAATCTCCCTGTCAGGCAGGAGGAATTTTCTTATGAGAACCCAACACAGGAAGATAACTGGGACAACAGTGAAGAAAACGCTCAGTTCTCTAGAACTGATTCATGGGTTCAAGGATCGTGGGATGCAGAAGCTCCGCAACCTATCCAGAACGGAGATGGAGCTGAACAGTGGCTGGAAACAGAAGTTCCTCAGCCTGTCGTTGATGAATCTGAATGGTCTGATGGCTGGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002252 GO:0002376 GO:0003674 GO:0003724 GO:0003824 GO:0004386 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0009605 GO:0009607 GO:0009615 GO:0009616 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0016441 GO:0016458 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0019222 GO:0031047 GO:0035194 GO:0035821 GO:0040029 GO:0043207 GO:0044003 GO:0044403 GO:0044419 GO:0045087 GO:0048519 GO:0050789 GO:0050896 GO:0051607 GO:0051701 GO:0051704 GO:0051707 GO:0051817 GO:0052018 GO:0052249 GO:0060255 GO:0065007 GO:0098542 GO:0098586 GO:0140098

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA_11 AAA_12

Protein Analysis

912

Amino Acids

104.03

Weight (kDa)

5.33

Isoelectric Point (pI)

46.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MOV-10_beta-barrel	PF21634	273 - 358	3.4e-31	Helicase MOV-10, beta-barrel domain
ResIII	PF04851	404 - 568	1.4e-08	Type III restriction enzyme, res subunit
AAA_11	PF13086	406 - 499	4.3e-20	AAA domain
AAA_30	PF13604	406 - 597	2.5e-12	AAA domain
AAA_19	PF13245	429 - 593	2.3e-08	AAA domain
AAA_11	PF13086	525 - 599	9.4e-13	AAA domain
AAA_12	PF13087	609 - 810	1.1e-49	AAA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004411)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05460 AT1G05460
fragaria_vesca	FvH4_4g15972 FvH4_4g15972 FvH4_4g15972 FvH4_4g15972 FvH4_4g15972 FvH4_4g15972 FvH4_4g15972
malus_domestica	MD13G1196500.v1.1
prunus_persica	Prupe.1G017300_v2.0.a1 Prupe.1G017300_v2.0.a1 Prupe.1G017300_v2.0.a1 Prupe.1G017300_v2.0.a1 Prupe.1G017300_v2.0.a1 Prupe.1G017300_v2.0.a1
pyrus_communis	pycom13g16860
rosa_chinensis	RchiOBHm_Chr4g0415581
rosa_laevigata	RLG00000008062
rosa_multiflora	Rmu_sc0004599.1_g000006
rosa_roxburghii	Rroxscaffold_5G00359390
rosa_rugosa	Rorug04G0134800 Rorug04G0134900 Rorug04G0135000 Rorug04G0135100 Rorug04G0135200 Rorug04G0135300
rosa_samantha	Rh4AG196200 Rh4BG194900 Rh4CG206900 Rh4DG193800
rosa_wichuraiana	Rw4G016680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	1062, 2177, 2417
AbsI	CCTCGAGG	1 cut(s)	380
Acc16I	TGCGCA	1 cut(s)	1023
AccB7I	CCANNNNNTGG	1 cut(s)	541
AccBSI	CCGCTC	2 cut(s)	705, 1622
AccI	GTMKAC	2 cut(s)	1213, 2481
AccII	CGCG	1 cut(s)	664
AciI	CCGC	5 cut(s)	662, 705, 745, 1620, 2639
AclWI	GGATC	8 cut(s)	707, 924, 1243, 1601, 1705, 2441, 2454, 2626
AcsI	RAATTY	5 cut(s)	273, 1529, 1853, 2330, 2528
AcuI	CTGAAG	3 cut(s)	141, 1677, 2121
AfaI	GTAC	2 cut(s)	10, 1196
AfiI	CCNNNNNNNGG	9 cut(s)	160, 161, 541, 974, 994, 1098, 1277, 1313, 2551
AflII	CTTAAG	1 cut(s)	737
AjnI	CCWGG	3 cut(s)	400, 877, 1306
AjuI	GAANNNNNNNTTGG	4 cut(s)	1928, 1960, 2151, 2183
AloI	GAACNNNNNNTCC	4 cut(s)	56, 88, 1826, 1858
Alw21I	GWGCWC	3 cut(s)	44, 1393, 2202
Alw26I	GTCTC	4 cut(s)	48, 399, 1041, 1755
Alw44I	GTGCAC	1 cut(s)	1389
AlwI	GGATC	8 cut(s)	707, 924, 1243, 1601, 1705, 2441, 2454, 2626
AlwNI	CAGNNNCTG	1 cut(s)	2677
Ama87I	CYCGRG	4 cut(s)	365, 380, 1374, 1421
AoxI	GGCC	5 cut(s)	348, 543, 896, 1651, 1778
ApaLI	GTGCAC	1 cut(s)	1389
ApeKI	GCWGC	5 cut(s)	394, 1121, 1124, 1257, 1406
ApoI	RAATTY	5 cut(s)	273, 1529, 1853, 2330, 2528
Asp700I	GAANNNNTTC	2 cut(s)	898, 2602
AspLEI	GCGC	3 cut(s)	1024, 1587, 2475
AspS9I	GGNCC	5 cut(s)	128, 1268, 1280, 1301, 1778
AsuHPI	GGTGA	2 cut(s)	977, 1904
AsuII	TTCGAA	1 cut(s)	561
AvaI	CYCGRG	4 cut(s)	365, 380, 1374, 1421
AvaII	GGWCC	4 cut(s)	128, 1268, 1280, 1301
AxyI	CCTNAGG	1 cut(s)	1580
BaeGI	GKGCMC	2 cut(s)	711, 1393
BamHI	GGATCC	1 cut(s)	2446
BauI	CACGAG	1 cut(s)	2394
Bbv12I	GWGCWC	3 cut(s)	44, 1393, 2202
BbvCI	CCTCAGC	1 cut(s)	2694
BbvI	GCAGC	5 cut(s)	381, 1108, 1111, 1244, 1418
BccI	CCATC	8 cut(s)	310, 775, 1162, 1167, 1997, 2089, 2654, 2720
BciT130I	CCWGG	3 cut(s)	402, 879, 1308
BclI	TGATCA	1 cut(s)	757
BcoDI	GTCTC	4 cut(s)	48, 399, 1041, 1755
BfaI	CTAG	4 cut(s)	621, 1722, 2106, 2595
BfmI	CTRYAG	3 cut(s)	1125, 1588, 2139
BfoI	RGCGCY	2 cut(s)	1588, 2476
BfrI	CTTAAG	1 cut(s)	737
BisI	GCNGC	6 cut(s)	395, 1122, 1125, 1258, 1407, 1620
BlsI	GCNGC	6 cut(s)	396, 1123, 1126, 1259, 1408, 1621
Bme1390I	CCNGG	3 cut(s)	402, 879, 1308
Bme18I	GGWCC	4 cut(s)	128, 1268, 1280, 1301
BmeT110I	CYCGRG	4 cut(s)	365, 380, 1374, 1421
BmgT120I	GGNCC	5 cut(s)	128, 1268, 1280, 1301, 1778
BmiI	GGNNCC	6 cut(s)	129, 321, 1145, 1270, 2426, 2448
BmrFI	CCNGG	3 cut(s)	402, 879, 1308
BmrI	ACTGGG	2 cut(s)	1709, 2572
BmsI	GCATC	4 cut(s)	1108, 1221, 1936, 2617
BmuI	ACTGGG	2 cut(s)	1709, 2572
BplI	GAGNNNNNCTC	4 cut(s)	348, 380, 1606, 1638
BpmI	CTGGAG	2 cut(s)	273, 1779
Bpu10I	CCTNAGC	1 cut(s)	2694
Bpu14I	TTCGAA	1 cut(s)	561
BpuEI	CTTGAG	1 cut(s)	721
Bsa29I	ATCGAT	1 cut(s)	78
BsaAI	YACGTR	1 cut(s)	1882
BsaBI	GATNNNNATC	1 cut(s)	600
BsaI	GGTCTC	1 cut(s)	1755
BsaJI	CCNNGG	6 cut(s)	438, 877, 878, 910, 1252, 2031
BsaWI	WCCGGW	1 cut(s)	2094
BsaXI	ACNNNNNCTCC	6 cut(s)	195, 225, 515, 545, 1826, 1856
Bsc4I	CCNNNNNNNGG	9 cut(s)	160, 161, 541, 974, 994, 1098, 1277, 1313, 2551
Bse1I	ACTGG	4 cut(s)	251, 1715, 2459, 2567
Bse21I	CCTNAGG	1 cut(s)	1580
Bse8I	GATNNNNATC	1 cut(s)	600
BseBI	CCWGG	3 cut(s)	402, 879, 1308
BseCI	ATCGAT	1 cut(s)	78
BseDI	CCNNGG	6 cut(s)	438, 877, 878, 910, 1252, 2031
BseGI	GGATG	5 cut(s)	34, 1416, 1681, 1845, 2632
BseJI	GATNNNNATC	1 cut(s)	600
BseLI	CCNNNNNNNGG	9 cut(s)	160, 161, 541, 974, 994, 1098, 1277, 1313, 2551
BseMII	CTCAG	9 cut(s)	879, 930, 1149, 1594, 1995, 2144, 2351, 2600, 2708
BseNI	ACTGG	4 cut(s)	251, 1715, 2459, 2567
BseRI	GAGGAG	4 cut(s)	856, 859, 1421, 1968
BseSI	GKGCMC	2 cut(s)	711, 1393
BseXI	GCAGC	5 cut(s)	381, 1108, 1111, 1244, 1418
BseYI	CCCAGC	1 cut(s)	115
BsgI	GTGCAG	3 cut(s)	488, 1257, 1425
Bsh1236I	CGCG	1 cut(s)	664
BshFI	GGCC	5 cut(s)	350, 545, 898, 1653, 1780
BshVI	ATCGAT	1 cut(s)	78
BsiHKAI	GWGCWC	3 cut(s)	44, 1393, 2202
BsiHKCI	CYCGRG	4 cut(s)	365, 380, 1374, 1421
BsiSI	CCGG	1 cut(s)	2095
BslFI	GGGAC	6 cut(s)	131, 850, 860, 1147, 2286, 2579
BslI	CCNNNNNNNGG	9 cut(s)	160, 161, 541, 974, 994, 1098, 1277, 1313, 2551
BsmAI	GTCTC	4 cut(s)	48, 399, 1041, 1755
BsmBI	CGTCTC	1 cut(s)	1041
BsmFI	GGGAC	6 cut(s)	131, 850, 860, 1147, 2286, 2579
BsmI	GAATGC	1 cut(s)	2046
BsnI	GGCC	5 cut(s)	350, 545, 898, 1653, 1780
Bso31I	GGTCTC	1 cut(s)	1755
BsoBI	CYCGRG	4 cut(s)	365, 380, 1374, 1421
Bsp119I	TTCGAA	1 cut(s)	561
Bsp1286I	GDGCHC	4 cut(s)	44, 711, 1393, 2202
BspACI	CCGC	5 cut(s)	662, 705, 745, 1620, 2639
BspANI	GGCC	5 cut(s)	350, 545, 898, 1653, 1780
BspCNI	CTCAG	9 cut(s)	880, 931, 1150, 1593, 1994, 2145, 2352, 2599, 2707
BspDI	ATCGAT	1 cut(s)	78
BspFNI	CGCG	1 cut(s)	664
BspLI	GGNNCC	6 cut(s)	129, 321, 1145, 1270, 2426, 2448
BspMAI	CTGCAG	2 cut(s)	1129, 2143
BspPI	GGATC	8 cut(s)	707, 924, 1243, 1601, 1705, 2441, 2454, 2626
BspQI	GCTCTTC	2 cut(s)	1218, 1629
BspT104I	TTCGAA	1 cut(s)	561
BspTI	CTTAAG	1 cut(s)	737
BspTNI	GGTCTC	1 cut(s)	1755
BsrBI	CCGCTC	2 cut(s)	705, 1622
BsrI	ACTGG	4 cut(s)	251, 1715, 2459, 2567
BssECI	CCNNGG	6 cut(s)	438, 877, 878, 910, 1252, 2031
BssSI	CACGAG	1 cut(s)	2394
BssT1I	CCWWGG	3 cut(s)	438, 910, 1252
Bst2BI	CACGAG	1 cut(s)	2394
Bst2UI	CCWGG	3 cut(s)	402, 879, 1308
Bst6I	CTCTTC	3 cut(s)	117, 1218, 1629
BstAFI	CTTAAG	1 cut(s)	737
BstBAI	YACGTR	1 cut(s)	1882
BstBI	TTCGAA	1 cut(s)	561
BstC8I	GCNNGC	4 cut(s)	434, 707, 885, 1236
BstDSI	CCRYGG	1 cut(s)	2031
BstENI	CCTNNNNNAGG	1 cut(s)	1311
BstF5I	GGATG	5 cut(s)	34, 1416, 1681, 1845, 2632
BstFNI	CGCG	1 cut(s)	664
BstH2I	RGCGCY	2 cut(s)	1588, 2476
BstHHI	GCGC	3 cut(s)	1024, 1587, 2475
BstMAI	GTCTC	4 cut(s)	48, 399, 1041, 1755
BstMWI	GCNNNNNNNGC	6 cut(s)	256, 356, 1118, 1688, 1777, 2470
BstNI	CCWGG	3 cut(s)	402, 879, 1308
BstNSI	RCATGY	1 cut(s)	2236
BstSCI	CCNGG	3 cut(s)	400, 877, 1306
BstSFI	CTRYAG	3 cut(s)	1125, 1588, 2139
BstSLI	GKGCMC	2 cut(s)	711, 1393
BstUI	CGCG	1 cut(s)	664
BstV1I	GCAGC	5 cut(s)	381, 1108, 1111, 1244, 1418
BstX2I	RGATCY	1 cut(s)	2446
BstYI	RGATCY	1 cut(s)	2446
Bsu15I	ATCGAT	1 cut(s)	78
Bsu36I	CCTNAGG	1 cut(s)	1580
BsuRI	GGCC	5 cut(s)	350, 545, 898, 1653, 1780
BsuTUI	ATCGAT	1 cut(s)	78
BtgI	CCRYGG	1 cut(s)	2031
BtsCI	GGATG	5 cut(s)	34, 1416, 1681, 1845, 2632
BtsIMutI	CAGTG	5 cut(s)	258, 1042, 1190, 2578, 2678
Cac8I	GCNNGC	4 cut(s)	434, 707, 885, 1236
CaiI	CAGNNNCTG	1 cut(s)	2677
CfoI	GCGC	3 cut(s)	1024, 1587, 2475
Cfr13I	GGNCC	5 cut(s)	128, 1268, 1280, 1301, 1778
ClaI	ATCGAT	1 cut(s)	78
CseI	GACGC	1 cut(s)	576
Csp6I	GTAC	2 cut(s)	9, 1195
CspCI	CAANNNNNGTGG	4 cut(s)	573, 608, 2603, 2638
CviQI	GTAC	2 cut(s)	9, 1195
Eam1104I	CTCTTC	3 cut(s)	117, 1218, 1629
EarI	CTCTTC	3 cut(s)	117, 1218, 1629
EciI	GGCGGA	1 cut(s)	760
Eco130I	CCWWGG	3 cut(s)	438, 910, 1252
Eco147I	AGGCCT	1 cut(s)	898
Eco31I	GGTCTC	1 cut(s)	1755
Eco32I	GATATC	4 cut(s)	67, 854, 1510, 1824
Eco47I	GGWCC	4 cut(s)	128, 1268, 1280, 1301
Eco57I	CTGAAG	3 cut(s)	141, 1677, 2121
Eco81I	CCTNAGG	1 cut(s)	1580
Eco88I	CYCGRG	4 cut(s)	365, 380, 1374, 1421
EcoNI	CCTNNNNNAGG	1 cut(s)	1311
EcoO109I	RGGNCCY	1 cut(s)	1268
EcoRII	CCWGG	3 cut(s)	400, 877, 1306
EcoRV	GATATC	4 cut(s)	67, 854, 1510, 1824
EcoT14I	CCWWGG	3 cut(s)	438, 910, 1252
ErhI	CCWWGG	3 cut(s)	438, 910, 1252
Esp3I	CGTCTC	1 cut(s)	1041
FaqI	GGGAC	6 cut(s)	131, 850, 860, 1147, 2286, 2579
FauI	CCCGC	1 cut(s)	698
FbaI	TGATCA	1 cut(s)	757
FblI	GTMKAC	2 cut(s)	1213, 2481
Fnu4HI	GCNGC	6 cut(s)	395, 1122, 1125, 1258, 1407, 1620
FokI	GGATG	5 cut(s)	41, 1403, 1688, 1852, 2639
Fsp4HI	GCNGC	6 cut(s)	395, 1122, 1125, 1258, 1407, 1620
FspBI	CTAG	4 cut(s)	621, 1722, 2106, 2595
FspI	TGCGCA	1 cut(s)	1023
GlaI	GCGC	3 cut(s)	1023, 1586, 2474
GluI	GCNGC	6 cut(s)	395, 1122, 1125, 1258, 1407, 1620
GsaI	CCCAGC	1 cut(s)	119
GsuI	CTGGAG	2 cut(s)	273, 1779
HaeII	RGCGCY	2 cut(s)	1588, 2476
HaeIII	GGCC	5 cut(s)	350, 545, 898, 1653, 1780
HapII	CCGG	1 cut(s)	2095
HgaI	GACGC	1 cut(s)	576
HhaI	GCGC	3 cut(s)	1024, 1587, 2475
Hin6I	GCGC	3 cut(s)	1022, 1585, 2473
HinP1I	GCGC	3 cut(s)	1022, 1585, 2473
HincII	GTYRAC	1 cut(s)	1364
HindII	GTYRAC	1 cut(s)	1364
HindIII	AAGCTT	4 cut(s)	932, 1689, 2214, 2462
HinfI	GANTC	9 cut(s)	296, 335, 368, 596, 1160, 1294, 1979, 2603, 2711
HpaII	CCGG	1 cut(s)	2095
HphI	GGTGA	2 cut(s)	977, 1904
Hpy166II	GTNNAC	5 cut(s)	1009, 1214, 1364, 1391, 2482
Hpy188III	TCNNGA	7 cut(s)	290, 700, 716, 766, 1423, 2595, 2650
Hpy8I	GTNNAC	5 cut(s)	1009, 1214, 1364, 1391, 2482
HpyCH4IV	ACGT	3 cut(s)	499, 1449, 1881
HpyF10VI	GCNNNNNNNGC	6 cut(s)	256, 356, 1118, 1688, 1777, 2470
HpySE526I	ACGT	3 cut(s)	499, 1449, 1881
HspAI	GCGC	3 cut(s)	1022, 1585, 2473
Ksp22I	TGATCA	1 cut(s)	757
LguI	GCTCTTC	2 cut(s)	1218, 1629
LmnI	GCTCC	5 cut(s)	256, 319, 1541, 2641, 2663
Lsp1109I	GCAGC	5 cut(s)	381, 1108, 1111, 1244, 1418
LweI	GCATC	4 cut(s)	1108, 1221, 1936, 2617
MaeI	CTAG	4 cut(s)	621, 1722, 2106, 2595
MaeII	ACGT	3 cut(s)	499, 1449, 1881
MaeIII	GTNAC	7 cut(s)	107, 724, 1037, 1877, 1882, 1910, 2122
MbiI	CCGCTC	2 cut(s)	705, 1622
MfeI	CAATTG	3 cut(s)	12, 228, 585
MflI	RGATCY	1 cut(s)	2446
MhlI	GDGCHC	4 cut(s)	44, 711, 1393, 2202
MlyI	GAGTC	5 cut(s)	290, 329, 377, 1169, 1973
MmeI	TCCRAC	2 cut(s)	1372, 2230
MroXI	GAANNNNTTC	2 cut(s)	898, 2602
MspA1I	CMGCKG	1 cut(s)	119
MspCI	CTTAAG	1 cut(s)	737
MspI	CCGG	1 cut(s)	2095
MspR9I	CCNGG	3 cut(s)	402, 879, 1308
MunI	CAATTG	3 cut(s)	12, 228, 585
Mva1269I	GAATGC	1 cut(s)	2046
MvaI	CCWGG	3 cut(s)	402, 879, 1308
MvnI	CGCG	1 cut(s)	664
MwoI	GCNNNNNNNGC	6 cut(s)	256, 356, 1118, 1688, 1777, 2470
NlaIV	GGNNCC	6 cut(s)	129, 321, 1145, 1270, 2426, 2448
NmuCI	GTSAC	4 cut(s)	1037, 1882, 1910, 2122
NsbI	TGCGCA	1 cut(s)	1023
NspI	RCATGY	1 cut(s)	2236
NspV	TTCGAA	1 cut(s)	561
PaeR7I	CTCGAG	4 cut(s)	365, 380, 1374, 1421
PasI	CCCWGGG	1 cut(s)	878
PceI	AGGCCT	1 cut(s)	898
PciSI	GCTCTTC	2 cut(s)	1218, 1629
PcsI	WCGNNNNNNNCGW	1 cut(s)	75
PctI	GAATGC	1 cut(s)	2046
PdmI	GAANNNNTTC	2 cut(s)	898, 2602
PfeI	GAWTC	4 cut(s)	596, 1294, 2603, 2711
PflMI	CCANNNNNTGG	1 cut(s)	541
PkrI	GCNGC	6 cut(s)	396, 1123, 1126, 1259, 1408, 1621
PleI	GAGTC	5 cut(s)	290, 329, 376, 1168, 1973
PpsI	GAGTC	5 cut(s)	290, 329, 376, 1168, 1973
Ppu21I	YACGTR	1 cut(s)	1882
PpuMI	RGGWCCY	1 cut(s)	1268
PsiI	TTATAA	3 cut(s)	1062, 2177, 2417
Psp5II	RGGWCCY	1 cut(s)	1268
Psp6I	CCWGG	3 cut(s)	400, 877, 1306
PspFI	CCCAGC	1 cut(s)	115
PspGI	CCWGG	3 cut(s)	400, 877, 1306
PspN4I	GGNNCC	6 cut(s)	129, 321, 1145, 1270, 2426, 2448
PspPI	GGNCC	5 cut(s)	128, 1268, 1280, 1301, 1778
PspPPI	RGGWCCY	1 cut(s)	1268
PspXI	VCTCGAGB	3 cut(s)	365, 380, 1374
PstI	CTGCAG	2 cut(s)	1129, 2143
PstNI	CAGNNNCTG	1 cut(s)	2677
PsuI	RGATCY	1 cut(s)	2446
PvuII	CAGCTG	1 cut(s)	119
RsaI	GTAC	2 cut(s)	10, 1196
RsaNI	GTAC	2 cut(s)	9, 1195
SapI	GCTCTTC	2 cut(s)	1218, 1629
SatI	GCNGC	6 cut(s)	395, 1122, 1125, 1258, 1407, 1620
Sau96I	GGNCC	5 cut(s)	128, 1268, 1280, 1301, 1778
SchI	GAGTC	5 cut(s)	290, 329, 377, 1169, 1973
ScrFI	CCNGG	3 cut(s)	402, 879, 1308
SduI	GDGCHC	4 cut(s)	44, 711, 1393, 2202
SfaNI	GCATC	4 cut(s)	1108, 1221, 1936, 2617
SfcI	CTRYAG	3 cut(s)	1125, 1588, 2139
Sfr274I	CTCGAG	4 cut(s)	365, 380, 1374, 1421
SfuI	TTCGAA	1 cut(s)	561
SinI	GGWCC	4 cut(s)	128, 1268, 1280, 1301
SlaI	CTCGAG	4 cut(s)	365, 380, 1374, 1421
SmlI	CTYRAG	6 cut(s)	365, 380, 700, 737, 1374, 1421
SmoI	CTYRAG	6 cut(s)	365, 380, 700, 737, 1374, 1421
SseBI	AGGCCT	1 cut(s)	898
SsiI	CCGC	5 cut(s)	662, 705, 745, 1620, 2639
SspI	AATATT	1 cut(s)	1473
SspMI	CTAG	4 cut(s)	621, 1722, 2106, 2595
StuI	AGGCCT	1 cut(s)	898
StyD4I	CCNGG	3 cut(s)	400, 877, 1306
StyI	CCWWGG	3 cut(s)	438, 910, 1252
TaiI	ACGT	3 cut(s)	502, 1452, 1884
TatI	WGTACW	1 cut(s)	8
TauI	GCSGC	1 cut(s)	1622
TfiI	GAWTC	4 cut(s)	596, 1294, 2603, 2711
TscAI	CASTG	5 cut(s)	258, 1042, 1197, 2578, 2678
TseFI	GTSAC	4 cut(s)	1037, 1882, 1910, 2122
TseI	GCWGC	5 cut(s)	394, 1121, 1124, 1257, 1406
Tsp45I	GTSAC	4 cut(s)	1037, 1882, 1910, 2122
TspGWI	ACGGA	1 cut(s)	2670
TspRI	CASTG	5 cut(s)	258, 1042, 1197, 2578, 2678
Van91I	CCANNNNNTGG	1 cut(s)	541
Vha464I	CTTAAG	1 cut(s)	737
VneI	GTGCAC	1 cut(s)	1389
VpaK11BI	GGWCC	4 cut(s)	128, 1268, 1280, 1301
XagI	CCTNNNNNAGG	1 cut(s)	1311
XapI	RAATTY	5 cut(s)	273, 1529, 1853, 2330, 2528
XbaI	TCTAGA	1 cut(s)	2594
XceI	RCATGY	1 cut(s)	2236
XcmI	CCANNNNNNNNNTGG	2 cut(s)	258, 2657
XhoI	CTCGAG	4 cut(s)	365, 380, 1374, 1421
XmiI	GTMKAC	2 cut(s)	1213, 2481
XmnI	GAANNNNTTC	2 cut(s)	898, 2602
XspI	CTAG	4 cut(s)	621, 1722, 2106, 2595

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.