Rorug04G0135300

Probable lipid transfer

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0004411
Physical Location & Seq
Reverse (-)
21824301 .. 21828972
4672 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0135300.1

Sequence Viewer

Length: 1968 bp
ATGTTCTTCTGTGATGGGTTTTCTCTGAATTCTCTTCTTCATTCTCCATTAGTCCATAACACCATGATTACCAACCTCTTTGCTCTCTTCTTCTTTCTCTCCTCTGCTTCACTCTGTCTTTCCTATGAACCTCGCAACCATGAAGTGGTGGCTTTGATAAACCTGAAGAGCACTTTGAATGATCCTCATGGGGTTTTAACCAACTGGGATGGAGACTCTGTAGACCCATGTAGCTGGGCTATGATCACTTGCTCATCTGAGAATGTTGTTGTAGGCCTAGGAGCTCCAAGCCAGTCTCTGTCTGGAACTTTAACTGCGGCTATAGGAAATCTCACAAATCTTCGACAAGTGTTGCTGCAGAACAATAATATATCAGGTAAACTCCCAGCGGAGCTGGGTACTCTTCCCAAGCTTCAAACTCTAGATCTCTCCAATAATCGATTCTCGGGTGTCGTCCCAGACTCTCTGGGTCAGTTGAGTAGTCTGCAATACCTGAGGCTGAACAACAATAGCTTGTCTGGGGTTTTCCCTGTGTCTTTAGCCAAAATCCCTGCGCTTGCTTTCTTGGACTTGTCTTATAACAATCTTAGTGGACCAATACCCAAATTCCCAGCCAGAACTTTCAATGTTGTCGGTAATCCACTGATTTGTGGAAGCAGCTCCACAGAAGGATGCTCTGGATCAGCCCCTGTCCCTCTTTCGTTATCACTAAAACCATCACCTGGAAAAAACAAGTCCAAGATAGTAGCAATTGCACTTGGGGTGAGCTTGAGTTGTGCCTTTCTCATGCTCCTATCACTTGGAATCCTCTGGTACAGAAAGAAGCAGAAGAGCCAAACCATTCTGAAATTCAGTGACATTCAAGAAGAGGGACTTGTGAGCTTAGGCAACCTCAGAAACTTCACTTTCAAAGAGCTTCAAGTTGCCACGGACCATTTTAGCTCCAAGAACATACTGGGTGCTGGAGGTTTTGGGAATGTGTACAAGGGAAAGCTAGGGGATGGGACTATGGTGGCAGTGAAACGACTCAAGGATGTAACAGGAACAGCTGGAGAGTCACAATTTAGGACAGAATTAGAGATGATAAGCCTAGCAGTGCACCGGAATTTGCTTCGGTTAATTGGATATTGTGCTACTTCTAATGAGAGGCTTCTGGTGTACCCGTACATGTCCAATGGCAGTGTCGCCTTCAGGCTTAGAGGAAAGCCAACACTAGATTGGAACACAAGGAAGAGAATAGCAATTGGAGCTGCTAGAGGTCTTCTGTATCTACATGAGCAATGTGATCCAAAGATTATACACAGAGACGTGAAGGCTGCAAATGTGCTCCTAGATGACTACTGCGAGGCAATTGTTGGTGATTTTGGCCTTGCAAAGCTCCTCGACCATGCTGATTCTCATGTGACCACTGCTGTCCGTGGGACTGTTGGGCATATTGCACCAGAATACCTTTCTACTGGTCAATCATCTGAAAAAACTGATGTTTTTGGATTTGGCATTCTCTTGATAGAGCTCATAACTGGGATGAGAGCTCTGGAGTTTGGCAAAACAGTTAATCAGAAAGGAGCCATGCTTGAGTGGGTGAAGACAGTACAACAAGAAAAGAAAGTGGAGCTCTTGGTGGATAGAGAACTGGGGAACAATTACGATCGGATTGAGGTTGGTGAAATGCTGCAAGTGGCTTTGCTATGCACTCAATACCTACCAGCTCACCGCCCCAAGATGTCGGAAGTGGTCCGGATGCTTGAAGGCGATGGACTAGCGGAGAAGTGGGCTGCGTCACATAATCATAGTAAATCCAACATGGACCTCTTCCATACTCACAACAGTAGCAAAAGCACTCCCCACAGTACTTGGAATGCATCGAAACATGATGGCAGTGAACGCATGTTTGGCACATCTATGGATGAGGATGATGATGAGCATTCCTTGGATTCCTATGCCATGGAACTCTCCGGTCCCAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LTP_2

Protein Analysis

655

Amino Acids

71.47

Weight (kDa)

7.03

Isoelectric Point (pI)

32.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 46 - 85 5.5e-13 Leucine rich repeat N-terminal domain
LRR_14 PF23598 105 - 190 6.3e-10 Leucine-rich repeat region
LRR_4 PF12799 112 - 147 9.2e-07 Leucine Rich repeats (2 copies)
LRR_8 PF13855 136 - 196 1.5e-13 Leucine rich repeat
Pkinase PF00069 314 - 578 8.2e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 316 - 582 6.2e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 579
AccB7I CCANNNNNTGG 2 cut(s) 145, 722
AccI GTMKAC 1 cut(s) 222
AccIII TCCGGA 1 cut(s) 1737
AciI CCGC 4 cut(s) 317, 389, 1714, 1763
AclWI GGATC 3 cut(s) 176, 688, 1280
AcsI RAATTY 4 cut(s) 28, 605, 848, 1105
AcuI CTGAAG 2 cut(s) 185, 1174
AfaI GTAC 7 cut(s) 400, 815, 983, 1160, 1166, 1593, 1852
AfiI CCNNNNNNNGG 2 cut(s) 145, 722
AflIII ACRYGT 1 cut(s) 1167
AgsI TTSAA 7 cut(s) 178, 416, 625, 863, 910, 920, 1748
AjiI CACGTC 1 cut(s) 1309
AjnI CCWGG 1 cut(s) 721
AjuI GAANNNNNNNTTGG 4 cut(s) 425, 457, 1875, 1907
Alw21I GWGCWC 7 cut(s) 173, 286, 1101, 1329, 1515, 1534, 1617
Alw26I GTCTC 3 cut(s) 207, 300, 1299
Alw44I GTGCAC 1 cut(s) 1097
AlwI GGATC 3 cut(s) 176, 688, 1280
AlwNI CAGNNNCTG 2 cut(s) 298, 689
Ama87I CYCGRG 1 cut(s) 445
Aor13HI TCCGGA 1 cut(s) 1737
AoxI GGCC 2 cut(s) 274, 1366
ApaLI GTGCAC 1 cut(s) 1097
ApeKI GCWGC 6 cut(s) 355, 657, 1250, 1316, 1672, 1775
ApoI RAATTY 4 cut(s) 28, 605, 848, 1105
AspA2I CCTAGG 1 cut(s) 277
AspLEI GCGC 1 cut(s) 556
AspS9I GGNCC 5 cut(s) 593, 931, 1735, 1807, 1958
AsuHPI GGTGA 6 cut(s) 711, 775, 1370, 1594, 1676, 1703
AvaI CYCGRG 1 cut(s) 445
AvaII GGWCC 5 cut(s) 593, 931, 1735, 1807, 1958
AvrII CCTAGG 1 cut(s) 277
AxyI CCTNAGG 1 cut(s) 494
BaeGI GKGCMC 1 cut(s) 1101
BanII GRGCYC 4 cut(s) 286, 1515, 1534, 1617
BbsI GAAGAC 2 cut(s) 1253, 1592
Bbv12I GWGCWC 7 cut(s) 173, 286, 1101, 1329, 1515, 1534, 1617
BbvI GCAGC 6 cut(s) 342, 669, 1237, 1303, 1659, 1762
BccI CCATC 6 cut(s) 8, 203, 724, 995, 1748, 1868
BciT130I CCWGG 1 cut(s) 723
BclI TGATCA 1 cut(s) 243
BcoDI GTCTC 3 cut(s) 207, 300, 1299
BfaI CTAG 8 cut(s) 278, 422, 995, 1091, 1214, 1254, 1331, 1760
BfmI CTRYAG 3 cut(s) 219, 321, 356
BglII AGATCT 1 cut(s) 424
BisI GCNGC 7 cut(s) 318, 356, 658, 1251, 1317, 1673, 1776
BlnI CCTAGG 1 cut(s) 277
BlsI GCNGC 7 cut(s) 319, 357, 659, 1252, 1318, 1674, 1777
BmcAI AGTACT 1 cut(s) 1852
Bme1390I CCNGG 1 cut(s) 723
Bme18I GGWCC 5 cut(s) 593, 931, 1735, 1807, 1958
BmeT110I CYCGRG 1 cut(s) 445
BmgBI CACGTC 1 cut(s) 1309
BmgT120I GGNCC 5 cut(s) 593, 931, 1735, 1807, 1958
BmiI GGNNCC 2 cut(s) 1567, 1960
BmrFI CCNGG 1 cut(s) 723
BmrI ACTGGG 4 cut(s) 214, 965, 1530, 1643
BmsI GCATC 3 cut(s) 662, 1731, 1871
BmuI ACTGGG 4 cut(s) 214, 965, 1530, 1643
BpiI GAAGAC 2 cut(s) 1253, 1592
BpmI CTGGAG 3 cut(s) 984, 1071, 1556
Bpu10I CCTNAGC 1 cut(s) 883
BpuEI CTTGAG 3 cut(s) 790, 1013, 1595
Bsa29I ATCGAT 1 cut(s) 439
BsaJI CCNNGG 5 cut(s) 277, 927, 1417, 1929, 1944
BsaWI WCCGGW 3 cut(s) 1101, 1737, 1955
BsaXI ACNNNNNCTCC 2 cut(s) 204, 234
Bsc4I CCNNNNNNNGG 2 cut(s) 145, 722
Bse1I ACTGG 6 cut(s) 209, 292, 960, 1462, 1525, 1638
Bse21I CCTNAGG 1 cut(s) 494
Bse3DI GCAATG 1 cut(s) 1286
BseAI TCCGGA 1 cut(s) 1737
BseBI CCWGG 1 cut(s) 723
BseCI ATCGAT 1 cut(s) 439
BseDI CCNNGG 5 cut(s) 277, 927, 1417, 1929, 1944
BseGI GGATG 8 cut(s) 214, 677, 1006, 1039, 1530, 1746, 1912, 1918
BseLI CCNNNNNNNGG 2 cut(s) 145, 722
BseMI GCAATG 1 cut(s) 1286
BseMII CTCAG 3 cut(s) 249, 485, 907
BseNI ACTGG 6 cut(s) 209, 292, 960, 1462, 1525, 1638
BseRI GAGGAG 2 cut(s) 91, 1370
BseSI GKGCMC 1 cut(s) 1101
BseXI GCAGC 6 cut(s) 342, 669, 1237, 1303, 1659, 1762
BseYI CCCAGC 4 cut(s) 234, 385, 394, 610
Bsh1285I CGRYCG 1 cut(s) 1651
BshFI GGCC 2 cut(s) 276, 1368
BshVI ATCGAT 1 cut(s) 439
BsiEI CGRYCG 1 cut(s) 1651
BsiHKAI GWGCWC 7 cut(s) 173, 286, 1101, 1329, 1515, 1534, 1617
BsiHKCI CYCGRG 1 cut(s) 445
BsiSI CCGG 3 cut(s) 1102, 1738, 1956
BslFI GGGAC 6 cut(s) 440, 677, 885, 1018, 1435, 1944
BslI CCNNNNNNNGG 2 cut(s) 145, 722
BsmAI GTCTC 3 cut(s) 207, 300, 1299
BsmBI CGTCTC 1 cut(s) 1299
BsmFI GGGAC 6 cut(s) 440, 677, 885, 1018, 1435, 1944
BsmI GAATGC 3 cut(s) 1497, 1864, 1924
BsnI GGCC 2 cut(s) 276, 1368
BsoBI CYCGRG 1 cut(s) 445
Bsp1286I GDGCHC 7 cut(s) 173, 286, 1101, 1329, 1515, 1534, 1617
Bsp13I TCCGGA 1 cut(s) 1737
Bsp1407I TGTACA 1 cut(s) 981
Bsp143I GATC 6 cut(s) 181, 243, 424, 680, 1285, 1648
Bsp19I CCATGG 1 cut(s) 1944
BspACI CCGC 4 cut(s) 317, 389, 1714, 1763
BspANI GGCC 2 cut(s) 276, 1368
BspCNI CTCAG 3 cut(s) 250, 486, 906
BspDI ATCGAT 1 cut(s) 439
BspEI TCCGGA 1 cut(s) 1737
BspLI GGNNCC 2 cut(s) 1567, 1960
BspMAI CTGCAG 1 cut(s) 360
BspPI GGATC 3 cut(s) 176, 688, 1280
BspQI GCTCTTC 2 cut(s) 161, 824
BsrDI GCAATG 1 cut(s) 1286
BsrGI TGTACA 1 cut(s) 981
BsrI ACTGG 6 cut(s) 209, 292, 960, 1462, 1525, 1638
BssECI CCNNGG 5 cut(s) 277, 927, 1417, 1929, 1944
BssMI GATC 6 cut(s) 181, 243, 424, 680, 1285, 1648
BssT1I CCWWGG 3 cut(s) 277, 1929, 1944
Bst2UI CCWGG 1 cut(s) 723
Bst4CI ACNGT 5 cut(s) 1426, 1552, 1591, 1829, 1850
Bst6I CTCTTC 8 cut(s) 39, 92, 161, 408, 824, 861, 1226, 1817
BstAUI TGTACA 1 cut(s) 981
BstC8I GCNNGC 1 cut(s) 558
BstDEI CTNAG 6 cut(s) 258, 494, 587, 883, 893, 1196
BstDSI CCRYGG 3 cut(s) 927, 1417, 1944
BstF5I GGATG 8 cut(s) 214, 677, 1006, 1039, 1530, 1746, 1912, 1918
BstHHI GCGC 1 cut(s) 556
BstKTI GATC 6 cut(s) 184, 246, 427, 683, 1288, 1651
BstMAI GTCTC 3 cut(s) 207, 300, 1299
BstMBI GATC 6 cut(s) 181, 243, 424, 680, 1285, 1648
BstMCI CGRYCG 1 cut(s) 1651
BstMWI GCNNNNNNNGC 3 cut(s) 1247, 1884, 1893
BstNI CCWGG 1 cut(s) 723
BstNSI RCATGY 2 cut(s) 1171, 1891
BstSCI CCNGG 1 cut(s) 721
BstSFI CTRYAG 3 cut(s) 219, 321, 356
BstSLI GKGCMC 1 cut(s) 1101
BstV1I GCAGC 6 cut(s) 342, 669, 1237, 1303, 1659, 1762
BstV2I GAAGAC 2 cut(s) 1253, 1592
BstX2I RGATCY 1 cut(s) 424
BstXI CCANNNNNNTGG 1 cut(s) 234
BstYI RGATCY 1 cut(s) 424
Bsu15I ATCGAT 1 cut(s) 439
Bsu36I CCTNAGG 1 cut(s) 494
BsuRI GGCC 2 cut(s) 276, 1368
BsuTUI ATCGAT 1 cut(s) 439
BtgI CCRYGG 3 cut(s) 927, 1417, 1944
BtgZI GCGATG 1 cut(s) 1767
BtrI CACGTC 1 cut(s) 1309
BtsCI GGATG 8 cut(s) 214, 677, 1006, 1039, 1530, 1746, 1912, 1918
BtsI GCAGTG 5 cut(s) 1023, 1101, 1186, 1407, 1885
BtsIMutI CAGTG 7 cut(s) 641, 859, 1023, 1101, 1186, 1407, 1885
Cac8I GCNNGC 1 cut(s) 558
CaiI CAGNNNCTG 2 cut(s) 298, 689
CfoI GCGC 1 cut(s) 556
Cfr13I GGNCC 5 cut(s) 593, 931, 1735, 1807, 1958
ClaI ATCGAT 1 cut(s) 439
CseI GACGC 1 cut(s) 1767
Csp6I GTAC 7 cut(s) 399, 814, 982, 1159, 1165, 1592, 1851
CspCI CAANNNNNGTGG 4 cut(s) 571, 606, 1835, 1870
CviQI GTAC 7 cut(s) 399, 814, 982, 1159, 1165, 1592, 1851
DdeI CTNAG 6 cut(s) 258, 494, 587, 883, 893, 1196
DpnI GATC 6 cut(s) 183, 245, 426, 682, 1287, 1650
DpnII GATC 6 cut(s) 181, 243, 424, 680, 1285, 1648
Eam1104I CTCTTC 8 cut(s) 39, 92, 161, 408, 824, 861, 1226, 1817
EarI CTCTTC 8 cut(s) 39, 92, 161, 408, 824, 861, 1226, 1817
Ecl136II GAGCTC 4 cut(s) 284, 1513, 1532, 1615
Eco130I CCWWGG 3 cut(s) 277, 1929, 1944
Eco147I AGGCCT 1 cut(s) 276
Eco24I GRGCYC 4 cut(s) 286, 1515, 1534, 1617
Eco47I GGWCC 5 cut(s) 593, 931, 1735, 1807, 1958
Eco53kI GAGCTC 4 cut(s) 284, 1513, 1532, 1615
Eco57I CTGAAG 2 cut(s) 185, 1174
Eco81I CCTNAGG 1 cut(s) 494
Eco88I CYCGRG 1 cut(s) 445
EcoICRI GAGCTC 4 cut(s) 284, 1513, 1532, 1615
EcoRI GAATTC 1 cut(s) 28
EcoRII CCWGG 1 cut(s) 721
EcoT14I CCWWGG 3 cut(s) 277, 1929, 1944
EcoT22I ATGCAT 1 cut(s) 1864
EcoT38I GRGCYC 4 cut(s) 286, 1515, 1534, 1617
ErhI CCWWGG 3 cut(s) 277, 1929, 1944
Esp3I CGTCTC 1 cut(s) 1299
FalI AAGNNNNNCTT 2 cut(s) 858, 890
FaqI GGGAC 6 cut(s) 440, 677, 885, 1018, 1435, 1944
FbaI TGATCA 1 cut(s) 243
FblI GTMKAC 1 cut(s) 222
Fnu4HI GCNGC 7 cut(s) 318, 356, 658, 1251, 1317, 1673, 1776
FokI GGATG 8 cut(s) 221, 684, 1013, 1046, 1537, 1753, 1919, 1925
FriOI GRGCYC 4 cut(s) 286, 1515, 1534, 1617
Fsp4HI GCNGC 7 cut(s) 318, 356, 658, 1251, 1317, 1673, 1776
FspBI CTAG 8 cut(s) 278, 422, 995, 1091, 1214, 1254, 1331, 1760
GlaI GCGC 1 cut(s) 555
GluI GCNGC 7 cut(s) 318, 356, 658, 1251, 1317, 1673, 1776
GsaI CCCAGC 4 cut(s) 238, 389, 398, 614
GsuI CTGGAG 3 cut(s) 984, 1071, 1556
HaeIII GGCC 2 cut(s) 276, 1368
HapII CCGG 3 cut(s) 1102, 1738, 1956
HgaI GACGC 1 cut(s) 1767
HhaI GCGC 1 cut(s) 556
Hin6I GCGC 1 cut(s) 554
HinP1I GCGC 1 cut(s) 554
HindIII AAGCTT 1 cut(s) 410
HinfI GANTC 8 cut(s) 215, 441, 461, 804, 1026, 1055, 1394, 1934
HpaII CCGG 3 cut(s) 1102, 1738, 1956
HphI GGTGA 6 cut(s) 711, 775, 1370, 1594, 1676, 1703
Hpy166II GTNNAC 7 cut(s) 223, 380, 593, 982, 1099, 1159, 1883
Hpy188I TCNGA 8 cut(s) 27, 259, 846, 896, 1471, 1560, 1653, 1729
Hpy188III TCNNGA 7 cut(s) 303, 422, 678, 863, 1504, 1535, 1738
Hpy8I GTNNAC 7 cut(s) 223, 380, 593, 982, 1099, 1159, 1883
HpyAV CCTTC 4 cut(s) 662, 1198, 1306, 1742
HpyCH4III ACNGT 5 cut(s) 1426, 1552, 1591, 1829, 1850
HpyCH4IV ACGT 1 cut(s) 1308
HpyF10VI GCNNNNNNNGC 3 cut(s) 1247, 1884, 1893
HpyF3I CTNAG 6 cut(s) 258, 494, 587, 883, 893, 1196
HpySE526I ACGT 1 cut(s) 1308
HspAI GCGC 1 cut(s) 554
Kpn2I TCCGGA 1 cut(s) 1737
Ksp22I TGATCA 1 cut(s) 243
Kzo9I GATC 6 cut(s) 181, 243, 424, 680, 1285, 1648
LguI GCTCTTC 2 cut(s) 161, 824
Lsp1109I GCAGC 6 cut(s) 342, 669, 1237, 1303, 1659, 1762
LweI GCATC 3 cut(s) 662, 1731, 1871
MaeI CTAG 8 cut(s) 278, 422, 995, 1091, 1214, 1254, 1331, 1760
MaeII ACGT 1 cut(s) 1308
MaeIII GTNAC 5 cut(s) 854, 1036, 1056, 1402, 1779
MalI GATC 6 cut(s) 183, 245, 426, 682, 1287, 1650
MboI GATC 6 cut(s) 181, 243, 424, 680, 1285, 1648
MfeI CAATTG 3 cut(s) 750, 1242, 1350
MflI RGATCY 1 cut(s) 424
MhlI GDGCHC 7 cut(s) 173, 286, 1101, 1329, 1515, 1534, 1617
MlyI GAGTC 4 cut(s) 209, 455, 1020, 1064
MmeI TCCRAC 2 cut(s) 1707, 1824
Mph1103I ATGCAT 1 cut(s) 1864
MroI TCCGGA 1 cut(s) 1737
MseI TTAA 4 cut(s) 197, 311, 1118, 1554
MslI CAYNNNNRTG 1 cut(s) 1901
MspA1I CMGCKG 2 cut(s) 389, 1049
MspI CCGG 3 cut(s) 1102, 1738, 1956
MspR9I CCNGG 1 cut(s) 723
MunI CAATTG 3 cut(s) 750, 1242, 1350
Mva1269I GAATGC 3 cut(s) 1497, 1864, 1924
MvaI CCWGG 1 cut(s) 723
MwoI GCNNNNNNNGC 3 cut(s) 1247, 1884, 1893
NcoI CCATGG 1 cut(s) 1944
NdeII GATC 6 cut(s) 181, 243, 424, 680, 1285, 1648
NlaIV GGNNCC 2 cut(s) 1567, 1960
NmuCI GTSAC 4 cut(s) 854, 1056, 1402, 1779
NsiI ATGCAT 1 cut(s) 1864
NspI RCATGY 2 cut(s) 1171, 1891
PceI AGGCCT 1 cut(s) 276
PciI ACATGT 1 cut(s) 1167
PciSI GCTCTTC 2 cut(s) 161, 824
PctI GAATGC 3 cut(s) 1497, 1864, 1924
PfeI GAWTC 4 cut(s) 441, 804, 1394, 1934
PflMI CCANNNNNTGG 2 cut(s) 145, 722
PkrI GCNGC 7 cut(s) 319, 357, 659, 1252, 1318, 1674, 1777
Ple19I CGATCG 1 cut(s) 1651
PleI GAGTC 4 cut(s) 209, 455, 1020, 1063
PpsI GAGTC 4 cut(s) 209, 455, 1020, 1063
PscI ACATGT 1 cut(s) 1167
PsiI TTATAA 1 cut(s) 579
Psp124BI GAGCTC 4 cut(s) 286, 1515, 1534, 1617
Psp6I CCWGG 1 cut(s) 721
PspFI CCCAGC 4 cut(s) 234, 385, 394, 610
PspGI CCWGG 1 cut(s) 721
PspN4I GGNNCC 2 cut(s) 1567, 1960
PspPI GGNCC 5 cut(s) 593, 931, 1735, 1807, 1958
PstI CTGCAG 1 cut(s) 360
PstNI CAGNNNCTG 2 cut(s) 298, 689
PsuI RGATCY 1 cut(s) 424
PvuI CGATCG 1 cut(s) 1651
PvuII CAGCTG 1 cut(s) 1049
RsaI GTAC 7 cut(s) 400, 815, 983, 1160, 1166, 1593, 1852
RsaNI GTAC 7 cut(s) 399, 814, 982, 1159, 1165, 1592, 1851
RseI CAYNNNNRTG 1 cut(s) 1901
SacI GAGCTC 4 cut(s) 286, 1515, 1534, 1617
SapI GCTCTTC 2 cut(s) 161, 824
SaqAI TTAA 4 cut(s) 197, 311, 1118, 1554
SatI GCNGC 7 cut(s) 318, 356, 658, 1251, 1317, 1673, 1776
Sau3AI GATC 6 cut(s) 181, 243, 424, 680, 1285, 1648
Sau96I GGNCC 5 cut(s) 593, 931, 1735, 1807, 1958
ScaI AGTACT 1 cut(s) 1852
SchI GAGTC 4 cut(s) 209, 455, 1020, 1064
ScrFI CCNGG 1 cut(s) 723
SduI GDGCHC 7 cut(s) 173, 286, 1101, 1329, 1515, 1534, 1617
SfaNI GCATC 3 cut(s) 662, 1731, 1871
SfcI CTRYAG 3 cut(s) 219, 321, 356
SinI GGWCC 5 cut(s) 593, 931, 1735, 1807, 1958
SmiMI CAYNNNNRTG 1 cut(s) 1901
SmlI CTYRAG 3 cut(s) 769, 1028, 1574
SmoI CTYRAG 3 cut(s) 769, 1028, 1574
SseBI AGGCCT 1 cut(s) 276
SsiI CCGC 4 cut(s) 317, 389, 1714, 1763
SspMI CTAG 8 cut(s) 278, 422, 995, 1091, 1214, 1254, 1331, 1760
SstI GAGCTC 4 cut(s) 286, 1515, 1534, 1617
StuI AGGCCT 1 cut(s) 276
StyD4I CCNGG 1 cut(s) 721
StyI CCWWGG 3 cut(s) 277, 1929, 1944
TaaI ACNGT 5 cut(s) 1426, 1552, 1591, 1829, 1850
TaiI ACGT 1 cut(s) 1311
TaqI TCGA 4 cut(s) 343, 439, 1383, 1865
TatI WGTACW 3 cut(s) 981, 1591, 1850
TauI GCSGC 1 cut(s) 320
TfiI GAWTC 4 cut(s) 441, 804, 1394, 1934
Tru1I TTAA 4 cut(s) 197, 311, 1118, 1554
Tru9I TTAA 4 cut(s) 197, 311, 1118, 1554
TscAI CASTG 7 cut(s) 648, 859, 1023, 1101, 1186, 1414, 1885
TseFI GTSAC 4 cut(s) 854, 1056, 1402, 1779
TseI GCWGC 6 cut(s) 355, 657, 1250, 1316, 1672, 1775
Tsp45I GTSAC 4 cut(s) 854, 1056, 1402, 1779
TspDTI ATGAA 3 cut(s) 29, 141, 156
TspGWI ACGGA 2 cut(s) 944, 1406
TspRI CASTG 7 cut(s) 648, 859, 1023, 1101, 1186, 1414, 1885
Van91I CCANNNNNTGG 2 cut(s) 145, 722
VneI GTGCAC 1 cut(s) 1097
VpaK11BI GGWCC 5 cut(s) 593, 931, 1735, 1807, 1958
XapI RAATTY 4 cut(s) 28, 605, 848, 1105
XbaI TCTAGA 1 cut(s) 421
XceI RCATGY 2 cut(s) 1171, 1891
XcmI CCANNNNNNNNNTGG 3 cut(s) 299, 952, 1215
XmaJI CCTAGG 1 cut(s) 277
XmiI GTMKAC 1 cut(s) 222
XspI CTAG 8 cut(s) 278, 422, 995, 1091, 1214, 1254, 1331, 1760
ZrmI AGTACT 1 cut(s) 1852
Zsp2I ATGCAT 1 cut(s) 1864
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.