Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004616

Physical Location & Seq

Genomic Coordinates Forward (+)

1682224 .. 1687363

Gene Structure 5140 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G05630.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3513 bp

ATGGATTCGCTAATTATCGAAGAAGAAGACGAAGAGGCGTTGGCCACGCTCGTCCCTGTTCCTCCGCGGCGTAAAACGCATTCCTATAGCCTACAATTCGATCACAAGCCTCACCATCAGATCCGCAAACACAGCCTGGACGAGGTTCCTAGATCCGCTACATTAGCATCCGAAGCCGTTTATTTCGATTCCTCCGACGACGAATTCTCCACCGGAGGTAACATCACAGAAAACGCCGCTGATGAAACCAACGCCGGAGCTGAGGAGTACACCATCGTTAATCCTCCTCCCAATGTCGGTCTTGGGGATGACGACACCGAGCCATTACCTGAATTTATCGGCGCTGGTGGCGGTTCCGGGATATTTAAGGTCCCGGTGCGCGCGGCGGTGCATCCCGGACGTCCGCCGTGTCTTGAGCTGAGGCCGCATCCGTTGAGGGAGACGCAGACTGGGAGATTCTTGAGGAACATTGCTTGTACGGAGACGCAGCTTTGGGCTGGTCAAGAGAATGGTATCAGGTTTTGGAATTTGGAAGATGCGTATGAGGCTGGGTGTGGGATTGGTGGCCAGGTCCCGCGAGGGGATGAGGATACGGCGCCGTTTCATGAGTCTGTTACTACTTCTCCAACAATGTGTTTGGTGGCTGACCAAAGCAACAAGCTTTTGTGGAGTGGTCACAAGGATGGCAAAATCCGGGCTTGGAAGATGGATCAGAGCTCTGTTTCTCATGATGATGATGATTCTGATCCTTTCAAGGAGCGTGTCTCCTGGCTAGCTCATCGTGGTCCTGTCAATTCCATTGTCATTAGCTCTTATGGTGATATGTGGTCATGTTCTGAAGGAGGTGTTATAAAAATATGGCCTTGGGATACGTTAGAGAAATCTCTGCTGCTTAAACCGGAGGAGAAACACATGGCTGCTCTATTAGTGGAGAGATCTGCCATTGACCTAAGGAGCCAAGTTACTGTAAATGGGACATGTAGCATATCTTCCTCAGAAGTCAAGTTTTTGTTAGCTGATTCAGTAAGAGCTAAAGTGTGGGCTGTGCAGTCACTCTCATTCTCAATCTGGGATGCTCGGAGTAAAGACCTTCTGAAAGTTTTAAATGTTGACGGGCAAGTTGAGAATCGTGGGGATCTGCCACCTATACAAGACCAACAAGTTGATGATGAAATGAAACTGAAGTTCTTCTCAGCTTCAAAAAGGGAAAAGCCACAGGGCTTTCTGCAGCGATCACGTAATGCCATAATGGGAGCGGCAGGAGCTGTTCGCCGAGTCGCCACTAGAAGTGCAGGAGCGTTTTCGGAAGATACTAGGAAAACAGAAGCTATCGTGTTAGCTGTAGATGGAACAATTTGGACTGGAAGCATAAGTGGCCTAATTGTTCAGTGGGATGGAAATGGAAACCGCTTGCGAGATGTGAATCACCATCACCGGCCTGTTTTGTGCTTTTGCACTTTTGGTGATCGAATATATGTGGGTTATGCAAGTGGCTACATCCAGGTCTTGGATTTAGACGGAAAGCTAATTTCAAGCTGGGTTTCACACAATGAACCTGTGATAAAGCTAGCAGCAGGTGGTGGTTTCATTTTCAGTCTGGCCACTCATGGTGGAGTACGAGGATGGTATGTGACATCTCCAGGACCCCTGGACAACATAATCCGAACGGAATTGTCTCAGAAGGAAACTTTATATGCCAGACAAGACAATGTTAGAATTTTAATTGGTACCTGGAATGTTGGTCAAGGAAGGGCTTCACATGATGCACTTATGTCGTGGCTGGGCTCTGTCACTTCAGATGTAGGCATTGTCGCTGTTGGGTTGCAAGAGGTGGAGATGGGGGCAGGCTTCCTTGCCATGTCTGCTGCTAAAGAAACGGTTGGACTTGAAGGAAGTGCCGTGGGGCAATGGTGGATTGATGCAATTGGAAAAGCCCTTGATGAGAAAAACACTTTCGAGCGTATGGGTTCAAGGCAGTTGGCAGGACTTCTGATATCTCTTTGGGCGAGGAAGGATATTAGAACTCATGTTGGAGATCTTGATGTTGCAGCAGTTCCATGTGGTTTTGGCCGTGCCATTGGCAACAAGGGAGGTGTAGGTCTGAGAATCAGAGTTTATGACCGAATAATGTGCTTTGTGAATTGCCACTTGGCTGCACACTTGGAGGCGGTTAATCGCAGAAACGCAGATTTCAATCACATTTTTCGATTGATGGTCTTTTCCCGAGGACAAAATCTAAGTAACGCTGCAGCTGGTATGGTGCCGTACCTGTTTTTGTCTTGCTCACTTGGCTTTTCCACATATTTATTTTGGCTGCTTTATTCTTCTGGTTTGCCATGGGCCCTCTCTCTTGCAGCTGGTGTCTCAACTTCAGCTTATACAACAAAGAGTAACACTATTCCAAGCACCGGCGCTGAAGAAATCAAGTCTGATCTTGCAGCAGCAGACATGGTCGCATTTTTTGGCGATTTCAACTATAGACTGTTTGGTATAACCTATGATGAAGCAAGGGACTTCATTTCACAGCGATCCTTCGATTGGCTCAGAGAAAGAGACCAACTTAGAGCAGAGATGAAGGTTGGAAAAGTCTTCCAAGGAATGCGCGAGGCATTAATCACTTTCCCTCCCACTTACAAATTTGAAAGGAATCGCTCAGGCCTTGGAGGATATGATTCAGGGGAGAAAAAGCGAATTCCTGCGTGGTGTGACCGAGTTATATATAGAGACACTCAATCTAGCCCATTCTCTGAGAGCAATTTGCAATGCCCTGTAGTTTCATCAGTCATAATGTATGAAGCTTGCATGGATGTTACTGAGAGCGATCACAAACCCGTGCGCTGCAAATTTCATGCGACAATAGCTCATGTTGATAAATCTGTGCGGAGACAGGAACTGGGGAAAATAATAAGGTCTAATGAGAAGATTTTATCCATATTCGAAGATTTAAGATTTGTTCCAGAAACTTCTGTGAGCACCAACAACATTGTTCTTCAGAGTCAGGACACAGTCATCCTAACAATCACAAACAATTCACCCACGAGCCAAGCCATATTTAACATTCTGTGCGGTGGCCAGGCTGTAGTTAAGGATGACGGAGAAGATGCTGACTACAATCCACGAGGCTCCTTTGGTCTACCACGCTGGCTCGAGGTTTCTCCCGCAGCAGGGATAATAAATCCAGAAGGATCCGTAGACGTTAAAGTTCATCACGAAGATTTTTACTCAATGGAGGAATATGTTGATGGCATCCCACAGAATTGGTGGTGCGAAGACACTCGAGATAAAGAAGCAATCCTGATGGTGAACATTCGAGGAAGCTGCTCAACAACATTGAGAAGCCACTCTGTCAAAGTCCGTCACTGCTTCTCAGCCAGAGTATGTCTCCTTGAGAACAGACCCACGAACCTAACAAAGAACTTAGGTGGTTCACGTCGTTACCCAACAGATATTACCCGTAATGGAAGCACTAGACCAAGAACTGAAGACTCGGTTAGACGAGGTAAAAGCCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005975 GO:0006066 GO:0006793 GO:0006796 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0007584 GO:0008150 GO:0008152 GO:0009056 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009611 GO:0009628 GO:0009629 GO:0009630 GO:0009637 GO:0009719 GO:0009725 GO:0009737 GO:0009743 GO:0009756 GO:0009846 GO:0009856 GO:0009888 GO:0009987 GO:0009991 GO:0010033 GO:0010087 GO:0010182 GO:0010252 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019637 GO:0019751 GO:0022414 GO:0022622 GO:0023052 GO:0031667 GO:0032501 GO:0032502 GO:0033993 GO:0042221 GO:0042578 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043647 GO:0044237 GO:0044238 GO:0044262 GO:0044281 GO:0044282 GO:0044424 GO:0044464 GO:0044706 GO:0046030 GO:0046164 GO:0046174 GO:0046434 GO:0046838 GO:0046855 GO:0048364 GO:0048731 GO:0048856 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051716 GO:0052658 GO:0052745 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071322 GO:0071545 GO:0071704 GO:0097305 GO:0099402 GO:1901575 GO:1901615 GO:1901616 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04070 map00562 map01100 map04070

Pfam Domains

Protein Families

Exo_endo_phos

Protein Analysis

1170

Amino Acids

129.48

Weight (kDa)

5.99

Isoelectric Point (pI)

44.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_IP5PC_F	PF23754	145 - 542	2e-210	IP5P C-F beta-propeller
Exo_endo_phos2	PF22669	576 - 878	5.3e-59	Endonuclease/Exonuclease/phosphatase family 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004616)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05630 AT1G05630 AT1G05630 AT2G31830 AT2G31830 AT2G31830 AT2G43900 AT2G43900
fragaria_vesca	FvH4_5g18650 FvH4_5g18650 FvH4_5g18650 FvH4_5g18650
malus_domestica	MD00G1087600.v1.1 MD15G1143600.v1.1
prunus_persica	Prupe.7G062000_v2.0.a1
pyrus_communis	pycom15g12950 pycom15g12960 pycom15g12970 pycom290g00230
rosa_chinensis	RchiOBHm_Chr7g0176851
rosa_laevigata	RLG00000005579
rosa_multiflora	Rmu_co8238923.1_g000001 Rmu_sc0005310.1_g000054 Rmu_sc0027976.1_g000001
rosa_roxburghii	Rroxscaffold_3G00276340
rosa_rugosa	Rorug06G0401200
rosa_samantha	Rh7AG000500 Rh7BG000900 Rh7CG000500 Rh7DG000700
rosa_wichuraiana	Rw7G000040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	851
AarI	CACCTGC	1 cut(s)	1565
AatII	GACGTC	1 cut(s)	403
Acc36I	ACCTGC	1 cut(s)	1565
Acc65I	GGTACC	1 cut(s)	1727
AccB1I	GGYRCC	3 cut(s)	595, 1727, 2260
AccB7I	CCANNNNNTGG	1 cut(s)	1507
AccBSI	CCGCTC	1 cut(s)	1256
AccI	GTMKAC	2 cut(s)	3133, 3192
AccII	CGCG	5 cut(s)	67, 381, 383, 577, 2604
AclWI	GGATC	8 cut(s)	115, 147, 717, 740, 1143, 2523, 3180, 3193
AcoI	YGGCCR	5 cut(s)	42, 565, 1599, 2068, 3070
AcsI	RAATTY	7 cut(s)	203, 332, 526, 1716, 2636, 2691, 2843
AcuI	CTGAAG	7 cut(s)	858, 1202, 1779, 2355, 2436, 2975, 3501
AcyI	GRCGYC	2 cut(s)	400, 596
AfaI	GTAC	5 cut(s)	269, 478, 1617, 1729, 2267
AfiI	CCNNNNNNNGG	8 cut(s)	142, 296, 580, 1507, 2408, 2538, 3164, 3165
AflIII	ACRYGT	1 cut(s)	977
AgsI	TTSAA	8 cut(s)	754, 1200, 1533, 1889, 1971, 2194, 2473, 2642
AjiI	CACGTC	1 cut(s)	3431
AjnI	CCWGG	8 cut(s)	135, 567, 767, 1500, 1639, 1647, 1730, 3072
AjuI	GAANNNNNNNTTGG	2 cut(s)	2132, 2164
Alw21I	GWGCWC	2 cut(s)	719, 2975
Alw26I	GTCTC	9 cut(s)	434, 476, 769, 1680, 2368, 2547, 2718, 2878, 3386
AlwI	GGATC	8 cut(s)	115, 147, 717, 740, 1143, 2523, 3180, 3193
AlwNI	CAGNNNCTG	2 cut(s)	1265, 2893
Ama87I	CYCGRG	3 cut(s)	2223, 3146, 3276
ApaI	GGGCCC	1 cut(s)	2344
ApoI	RAATTY	7 cut(s)	203, 332, 526, 1716, 2636, 2691, 2843
AseI	ATTAAT	1 cut(s)	2612
Asp700I	GAANNNNTTC	2 cut(s)	1187, 1753
Asp718I	GGTACC	1 cut(s)	1727
AspLEI	GCGC	7 cut(s)	344, 381, 383, 598, 2414, 2604, 2838
AspS9I	GGNCC	6 cut(s)	370, 571, 785, 1643, 2340, 2341
AsuC2I	CCSGG	4 cut(s)	358, 374, 396, 695
AsuHPI	GGTGA	7 cut(s)	104, 830, 1418, 1424, 1475, 3024, 3313
AsuII	TTCGAA	1 cut(s)	2937
AsuNHI	GCTAGC	2 cut(s)	772, 1567
AvaI	CYCGRG	3 cut(s)	2223, 3146, 3276
AvaII	GGWCC	4 cut(s)	370, 571, 785, 1643
AxyI	CCTNAGG	1 cut(s)	950
BaeGI	GKGCMC	1 cut(s)	2344
BalI	TGGCCA	4 cut(s)	44, 567, 1601, 3072
BamHI	GGATCC	1 cut(s)	3185
BanI	GGYRCC	3 cut(s)	595, 1727, 2260
BanII	GRGCYC	3 cut(s)	719, 1787, 2344
BarI	GAAGNNNNNNTAC	2 cut(s)	973, 1005
BauI	CACGAG	2 cut(s)	3037, 3117
BbsI	GAAGAC	4 cut(s)	33, 2581, 3276, 3489
Bbv12I	GWGCWC	2 cut(s)	719, 2975
BbvCI	CCTCAGC	2 cut(s)	261, 419
BceAI	ACGGC	7 cut(s)	161, 391, 583, 609, 1883, 2055, 2248
BcgI	CGANNNNNNTGC	6 cut(s)	1755, 1789, 2112, 2146, 3300, 3334
BciT130I	CCWGG	8 cut(s)	137, 569, 769, 1502, 1641, 1649, 1732, 3074
BciVI	GTATCC	2 cut(s)	583, 862
BcnI	CCSGG	4 cut(s)	358, 374, 396, 695
BcoDI	GTCTC	9 cut(s)	434, 476, 769, 1680, 2368, 2547, 2718, 2878, 3386
BfaI	CTAG	7 cut(s)	150, 773, 1284, 1314, 1568, 2736, 3468
BfmI	CTRYAG	7 cut(s)	85, 1226, 1341, 2247, 2476, 2769, 3078
BfoI	RGCGCY	3 cut(s)	345, 599, 2415
BfuAI	ACCTGC	1 cut(s)	1565
BfuI	GTATCC	2 cut(s)	583, 862
BglII	AGATCT	2 cut(s)	935, 2035
Bme18I	GGWCC	4 cut(s)	370, 571, 785, 1643
BmeT110I	CYCGRG	3 cut(s)	2223, 3146, 3276
BmgBI	CACGTC	1 cut(s)	3431
BmgT120I	GGNCC	6 cut(s)	370, 571, 785, 1643, 2340, 2341
BmrI	ACTGGG	2 cut(s)	459, 2903
BmsI	GCATC	9 cut(s)	176, 400, 436, 526, 1063, 1753, 1909, 3091, 3255
BmtI	GCTAGC	2 cut(s)	776, 1571
BmuI	ACTGGG	2 cut(s)	459, 2903
BpiI	GAAGAC	4 cut(s)	33, 2581, 3276, 3489
BplI	GAGNNNNNCTC	4 cut(s)	749, 781, 3366, 3398
BpmI	CTGGAG	1 cut(s)	1623
Bpu10I	CCTNAGC	3 cut(s)	261, 419, 2653
Bpu14I	TTCGAA	1 cut(s)	2937
BpuEI	CTTGAG	3 cut(s)	434, 481, 3407
BpuMI	CCSGG	4 cut(s)	358, 374, 396, 695
BsaAI	YACGTR	1 cut(s)	1238
BsaBI	GATNNNNATC	3 cut(s)	744, 1422, 2193
BsaHI	GRCGYC	2 cut(s)	400, 596
BsaI	GGTCTC	1 cut(s)	2547
BsaJI	CCNNGG	8 cut(s)	65, 863, 1647, 1899, 2224, 2336, 2593, 2659
BsaWI	WCCGGW	2 cut(s)	212, 898
BsaXI	ACNNNNNCTCC	6 cut(s)	191, 221, 607, 637, 2608, 2638
Bsc4I	CCNNNNNNNGG	8 cut(s)	142, 296, 580, 1507, 2408, 2538, 3164, 3165
Bse118I	RCCGGY	3 cut(s)	1434, 2408, 3507
Bse1I	ACTGG	3 cut(s)	454, 1366, 2898
Bse21I	CCTNAGG	1 cut(s)	950
Bse3DI	GCAATG	3 cut(s)	468, 1913, 2768
Bse8I	GATNNNNATC	3 cut(s)	744, 1422, 2193
BseBI	CCWGG	8 cut(s)	137, 569, 769, 1502, 1641, 1649, 1732, 3074
BseDI	CCNNGG	8 cut(s)	65, 863, 1647, 1899, 2224, 2336, 2593, 2659
BseJI	GATNNNNATC	3 cut(s)	744, 1422, 2193
BseLI	CCNNNNNNNGG	8 cut(s)	142, 296, 580, 1507, 2408, 2538, 3164, 3165
BseMI	GCAATG	3 cut(s)	468, 1913, 2768
BseNI	ACTGG	3 cut(s)	454, 1366, 2898
BsePI	GCGCGC	1 cut(s)	379
BseRI	GAGGAG	3 cut(s)	276, 278, 917
BseSI	GKGCMC	1 cut(s)	2344
BseYI	CCCAGC	3 cut(s)	548, 1536, 1780
BsgI	GTGCAG	3 cut(s)	1067, 1311, 2139
Bsh1236I	CGCG	5 cut(s)	67, 381, 383, 577, 2604
BshNI	GGYRCC	3 cut(s)	595, 1727, 2260
BsiHKAI	GWGCWC	2 cut(s)	719, 2975
BsiHKCI	CYCGRG	3 cut(s)	2223, 3146, 3276
BslFI	GGGAC	5 cut(s)	38, 356, 557, 988, 2525
BslI	CCNNNNNNNGG	8 cut(s)	142, 296, 580, 1507, 2408, 2538, 3164, 3165
BsmAI	GTCTC	9 cut(s)	434, 476, 769, 1680, 2368, 2547, 2718, 2878, 3386
BsmBI	CGTCTC	2 cut(s)	434, 476
BsmFI	GGGAC	5 cut(s)	38, 356, 557, 988, 2525
BsmI	GAATGC	2 cut(s)	79, 2604
Bso31I	GGTCTC	1 cut(s)	2547
BsoBI	CYCGRG	3 cut(s)	2223, 3146, 3276
Bsp119I	TTCGAA	1 cut(s)	2937
Bsp120I	GGGCCC	1 cut(s)	2340
Bsp1286I	GDGCHC	4 cut(s)	719, 1787, 2344, 2975
Bsp19I	CCATGG	1 cut(s)	2336
BspFNI	CGCG	5 cut(s)	67, 381, 383, 577, 2604
BspHI	TCATGA	2 cut(s)	604, 727
BspMAI	CTGCAG	2 cut(s)	1230, 2251
BspMI	ACCTGC	1 cut(s)	1565
BspOI	GCTAGC	2 cut(s)	776, 1571
BspPI	GGATC	8 cut(s)	115, 147, 717, 740, 1143, 2523, 3180, 3193
BspT104I	TTCGAA	1 cut(s)	2937
BspT107I	GGYRCC	3 cut(s)	595, 1727, 2260
BspTNI	GGTCTC	1 cut(s)	2547
BsrBI	CCGCTC	1 cut(s)	1256
BsrDI	GCAATG	3 cut(s)	468, 1913, 2768
BsrFI	RCCGGY	3 cut(s)	1434, 2408, 3507
BsrI	ACTGG	3 cut(s)	454, 1366, 2898
BssAI	RCCGGY	3 cut(s)	1434, 2408, 3507
BssECI	CCNNGG	8 cut(s)	65, 863, 1647, 1899, 2224, 2336, 2593, 2659
BssHII	GCGCGC	1 cut(s)	379
BssNI	GRCGYC	2 cut(s)	400, 596
BssSI	CACGAG	2 cut(s)	3037, 3117
BssT1I	CCWWGG	4 cut(s)	863, 2336, 2593, 2659
Bst2BI	CACGAG	2 cut(s)	3037, 3117
Bst2UI	CCWGG	8 cut(s)	137, 569, 769, 1502, 1641, 1649, 1732, 3074
Bst4CI	ACNGT	4 cut(s)	967, 1879, 2484, 3007
Bst6I	CTCTTC	1 cut(s)	27
BstACI	GRCGYC	2 cut(s)	400, 596
BstBAI	YACGTR	1 cut(s)	1238
BstBI	TTCGAA	1 cut(s)	2937
BstC8I	GCNNGC	7 cut(s)	381, 774, 1412, 1569, 1846, 2800, 3143
BstDSI	CCRYGG	3 cut(s)	65, 1899, 2336
BstENI	CCTNNNNNAGG	1 cut(s)	140
BstFNI	CGCG	5 cut(s)	67, 381, 383, 577, 2604
BstH2I	RGCGCY	3 cut(s)	345, 599, 2415
BstHHI	GCGC	7 cut(s)	344, 381, 383, 598, 2414, 2604, 2838
BstMAI	GTCTC	9 cut(s)	434, 476, 769, 1680, 2368, 2547, 2718, 2878, 3386
BstNI	CCWGG	8 cut(s)	137, 569, 769, 1502, 1641, 1649, 1732, 3074
BstNSI	RCATGY	1 cut(s)	981
BstSFI	CTRYAG	7 cut(s)	85, 1226, 1341, 2247, 2476, 2769, 3078
BstSLI	GKGCMC	1 cut(s)	2344
BstUI	CGCG	5 cut(s)	67, 381, 383, 577, 2604
BstV2I	GAAGAC	4 cut(s)	33, 2581, 3276, 3489
BstX2I	RGATCY	6 cut(s)	120, 152, 935, 1135, 2035, 3185
BstXI	CCANNNNNNTGG	1 cut(s)	3258
BstYI	RGATCY	6 cut(s)	120, 152, 935, 1135, 2035, 3185
Bsu36I	CCTNAGG	1 cut(s)	950
BsuI	GTATCC	2 cut(s)	583, 862
BtgI	CCRYGG	3 cut(s)	65, 1899, 2336
BtrI	CACGTC	1 cut(s)	3431
BtsI	GCAGTG	1 cut(s)	3358
BtsIMutI	CAGTG	2 cut(s)	1394, 3358
BveI	ACCTGC	1 cut(s)	1565
Cac8I	GCNNGC	7 cut(s)	381, 774, 1412, 1569, 1846, 2800, 3143
CaiI	CAGNNNCTG	2 cut(s)	1265, 2893
CciI	TCATGA	2 cut(s)	604, 727
CfoI	GCGC	7 cut(s)	344, 381, 383, 598, 2414, 2604, 2838
Cfr10I	RCCGGY	3 cut(s)	1434, 2408, 3507
Cfr13I	GGNCC	6 cut(s)	370, 571, 785, 1643, 2340, 2341
Cfr42I	CCGCGG	1 cut(s)	68
CseI	GACGC	2 cut(s)	451, 493
Csp6I	GTAC	5 cut(s)	268, 477, 1616, 1728, 2266
CviQI	GTAC	5 cut(s)	268, 477, 1616, 1728, 2266
DinI	GGCGCC	1 cut(s)	597
DraI	TTTAAA	1 cut(s)	1104
EaeI	YGGCCR	5 cut(s)	42, 565, 1599, 2068, 3070
Eam1104I	CTCTTC	1 cut(s)	27
EarI	CTCTTC	1 cut(s)	27
EciI	GGCGGA	1 cut(s)	393
Ecl136II	GAGCTC	1 cut(s)	717
Eco130I	CCWWGG	4 cut(s)	863, 2336, 2593, 2659
Eco147I	AGGCCT	1 cut(s)	2658
Eco24I	GRGCYC	3 cut(s)	719, 1787, 2344
Eco31I	GGTCTC	1 cut(s)	2547
Eco32I	GATATC	1 cut(s)	1995
Eco47I	GGWCC	4 cut(s)	370, 571, 785, 1643
Eco53kI	GAGCTC	1 cut(s)	717
Eco57I	CTGAAG	7 cut(s)	858, 1202, 1779, 2355, 2436, 2975, 3501
Eco81I	CCTNAGG	1 cut(s)	950
Eco88I	CYCGRG	3 cut(s)	2223, 3146, 3276
EcoICRI	GAGCTC	1 cut(s)	717
EcoNI	CCTNNNNNAGG	1 cut(s)	140
EcoO109I	RGGNCCY	4 cut(s)	370, 571, 1643, 2341
EcoRI	GAATTC	2 cut(s)	203, 2691
EcoRII	CCWGG	8 cut(s)	135, 567, 767, 1500, 1639, 1647, 1730, 3072
EcoRV	GATATC	1 cut(s)	1995
EcoT14I	CCWWGG	4 cut(s)	863, 2336, 2593, 2659
EcoT38I	GRGCYC	3 cut(s)	719, 1787, 2344
EgeI	GGCGCC	1 cut(s)	597
EheI	GGCGCC	1 cut(s)	597
ErhI	CCWWGG	4 cut(s)	863, 2336, 2593, 2659
Esp3I	CGTCTC	2 cut(s)	434, 476
FaqI	GGGAC	5 cut(s)	38, 356, 557, 988, 2525
FauI	CCCGC	2 cut(s)	582, 3166
FblI	GTMKAC	2 cut(s)	3133, 3192
FriOI	GRGCYC	3 cut(s)	719, 1787, 2344
FspBI	CTAG	7 cut(s)	150, 773, 1284, 1314, 1568, 2736, 3468
GlaI	GCGC	7 cut(s)	343, 380, 382, 597, 2413, 2603, 2837
GsaI	CCCAGC	3 cut(s)	552, 1540, 1784
GsuI	CTGGAG	1 cut(s)	1623
HaeII	RGCGCY	3 cut(s)	345, 599, 2415
HgaI	GACGC	2 cut(s)	451, 493
HhaI	GCGC	7 cut(s)	344, 381, 383, 598, 2414, 2604, 2838
Hin1I	GRCGYC	2 cut(s)	400, 596
Hin6I	GCGC	7 cut(s)	342, 379, 381, 596, 2412, 2602, 2836
HinP1I	GCGC	7 cut(s)	342, 379, 381, 596, 2412, 2602, 2836
HincII	GTYRAC	1 cut(s)	1111
HindII	GTYRAC	1 cut(s)	1111
HindIII	AAGCTT	2 cut(s)	659, 2796
HphI	GGTGA	7 cut(s)	104, 830, 1418, 1424, 1475, 3024, 3313
Hpy166II	GTNNAC	6 cut(s)	270, 1111, 3134, 3193, 3304, 3428
Hpy8I	GTNNAC	6 cut(s)	270, 1111, 3134, 3193, 3304, 3428
Hpy99I	CGWCG	3 cut(s)	200, 203, 3435
HpyAV	CCTTC	9 cut(s)	833, 1100, 1675, 1743, 1883, 2005, 2542, 2569, 3176
HpyCH4III	ACNGT	4 cut(s)	967, 1879, 2484, 3007
HpyCH4IV	ACGT	5 cut(s)	400, 872, 1237, 3195, 3430
HpySE526I	ACGT	5 cut(s)	400, 872, 1237, 3195, 3430
Hsp92I	GRCGYC	2 cut(s)	400, 596
HspAI	GCGC	7 cut(s)	342, 379, 381, 596, 2412, 2602, 2836
KasI	GGCGCC	1 cut(s)	595
KpnI	GGTACC	1 cut(s)	1731
KspI	CCGCGG	1 cut(s)	68
LmnI	GCTCC	7 cut(s)	257, 757, 954, 1253, 1262, 1295, 3128
LweI	GCATC	9 cut(s)	176, 400, 436, 526, 1063, 1753, 1909, 3091, 3255
MaeI	CTAG	7 cut(s)	150, 773, 1284, 1314, 1568, 2736, 3468
MaeII	ACGT	5 cut(s)	400, 872, 1237, 3195, 3430
MbiI	CCGCTC	1 cut(s)	1256
MfeI	CAATTG	1 cut(s)	1923
MflI	RGATCY	6 cut(s)	120, 152, 935, 1135, 2035, 3185
MhlI	GDGCHC	4 cut(s)	719, 1787, 2344, 2975
MlsI	TGGCCA	4 cut(s)	44, 567, 1601, 3072
MluNI	TGGCCA	4 cut(s)	44, 567, 1601, 3072
Mly113I	GGCGCC	1 cut(s)	596
MlyI	GAGTC	4 cut(s)	617, 1284, 3004, 3479
MmeI	TCCRAC	5 cut(s)	219, 650, 1861, 2011, 2560
Mox20I	TGGCCA	4 cut(s)	44, 567, 1601, 3072
MroXI	GAANNNNTTC	2 cut(s)	1187, 1753
MscI	TGGCCA	4 cut(s)	44, 567, 1601, 3072
MslI	CAYNNNNRTG	2 cut(s)	681, 732
Msp20I	TGGCCA	4 cut(s)	44, 567, 1601, 3072
MspA1I	CMGCKG	4 cut(s)	67, 239, 2252, 2357
MunI	CAATTG	1 cut(s)	1923
Mva1269I	GAATGC	2 cut(s)	79, 2604
MvaI	CCWGG	8 cut(s)	137, 569, 769, 1502, 1641, 1649, 1732, 3074
MvnI	CGCG	5 cut(s)	67, 381, 383, 577, 2604
NarI	GGCGCC	1 cut(s)	596
NciI	CCSGG	4 cut(s)	358, 374, 396, 695
NcoI	CCATGG	1 cut(s)	2336
NheI	GCTAGC	2 cut(s)	772, 1567
NmeAIII	GCCGAG	1 cut(s)	1298
NmuCI	GTSAC	6 cut(s)	674, 1050, 1630, 1789, 2705, 3356
NspI	RCATGY	1 cut(s)	981
NspV	TTCGAA	1 cut(s)	2937
PaeR7I	CTCGAG	2 cut(s)	3146, 3276
PagI	TCATGA	2 cut(s)	604, 727
PaqCI	CACCTGC	1 cut(s)	1565
PauI	GCGCGC	1 cut(s)	379
PceI	AGGCCT	1 cut(s)	2658
PciI	ACATGT	1 cut(s)	977
PcsI	WCGNNNNNNNCGW	1 cut(s)	192
PctI	GAATGC	2 cut(s)	79, 2604
PdmI	GAANNNNTTC	2 cut(s)	1187, 1753
PflFI	GACNNNGTC	2 cut(s)	2450, 3005
PflMI	CCANNNNNTGG	1 cut(s)	1507
PfoI	TCCNGGA	3 cut(s)	356, 394, 1639
PleI	GAGTC	4 cut(s)	616, 1283, 3003, 3479
PluTI	GGCGCC	1 cut(s)	599
PpsI	GAGTC	4 cut(s)	616, 1283, 3003, 3479
Ppu21I	YACGTR	1 cut(s)	1238
PpuMI	RGGWCCY	3 cut(s)	370, 571, 1643
PscI	ACATGT	1 cut(s)	977
PshBI	ATTAAT	1 cut(s)	2612
PsiI	TTATAA	1 cut(s)	851
Psp124BI	GAGCTC	1 cut(s)	719
Psp5II	RGGWCCY	3 cut(s)	370, 571, 1643
Psp6I	CCWGG	8 cut(s)	135, 567, 767, 1500, 1639, 1647, 1730, 3072
PspFI	CCCAGC	3 cut(s)	548, 1536, 1780
PspGI	CCWGG	8 cut(s)	135, 567, 767, 1500, 1639, 1647, 1730, 3072
PspOMI	GGGCCC	1 cut(s)	2340
PspPI	GGNCC	6 cut(s)	370, 571, 785, 1643, 2340, 2341
PspPPI	RGGWCCY	3 cut(s)	370, 571, 1643
PspXI	VCTCGAGB	1 cut(s)	3146
PstI	CTGCAG	2 cut(s)	1230, 2251
PstNI	CAGNNNCTG	2 cut(s)	1265, 2893
PsuI	RGATCY	6 cut(s)	120, 152, 935, 1135, 2035, 3185
PsyI	GACNNNGTC	2 cut(s)	2450, 3005
PteI	GCGCGC	1 cut(s)	379
PvuII	CAGCTG	2 cut(s)	2252, 2357
RsaI	GTAC	5 cut(s)	269, 478, 1617, 1729, 2267
RsaNI	GTAC	5 cut(s)	268, 477, 1616, 1728, 2266
RseI	CAYNNNNRTG	2 cut(s)	681, 732
SacI	GAGCTC	1 cut(s)	719
SacII	CCGCGG	1 cut(s)	68
Sau96I	GGNCC	6 cut(s)	370, 571, 785, 1643, 2340, 2341
SchI	GAGTC	4 cut(s)	617, 1284, 3004, 3479
SduI	GDGCHC	4 cut(s)	719, 1787, 2344, 2975
SfaNI	GCATC	9 cut(s)	176, 400, 436, 526, 1063, 1753, 1909, 3091, 3255
SfcI	CTRYAG	7 cut(s)	85, 1226, 1341, 2247, 2476, 2769, 3078
SfoI	GGCGCC	1 cut(s)	597
Sfr274I	CTCGAG	2 cut(s)	3146, 3276
Sfr303I	CCGCGG	1 cut(s)	68
SfuI	TTCGAA	1 cut(s)	2937
SgrAI	CRCCGGYG	1 cut(s)	2408
SgrBI	CCGCGG	1 cut(s)	68
SinI	GGWCC	4 cut(s)	370, 571, 785, 1643
SlaI	CTCGAG	2 cut(s)	3146, 3276
SmiMI	CAYNNNNRTG	2 cut(s)	681, 732
SmlI	CTYRAG	5 cut(s)	413, 460, 3146, 3276, 3386
SmoI	CTYRAG	5 cut(s)	413, 460, 3146, 3276, 3386
SseBI	AGGCCT	1 cut(s)	2658
SspDI	GGCGCC	1 cut(s)	595
SspMI	CTAG	7 cut(s)	150, 773, 1284, 1314, 1568, 2736, 3468
SstI	GAGCTC	1 cut(s)	719
StuI	AGGCCT	1 cut(s)	2658
StyI	CCWWGG	4 cut(s)	863, 2336, 2593, 2659
TaaI	ACNGT	4 cut(s)	967, 1879, 2484, 3007
TaiI	ACGT	5 cut(s)	403, 875, 1240, 3198, 3433
TaqII	GACCGA	3 cut(s)	287, 2136, 2724
TatI	WGTACW	1 cut(s)	267
TauI	GCSGC	5 cut(s)	70, 239, 386, 427, 1259
TscAI	CASTG	2 cut(s)	1394, 3365
TseFI	GTSAC	6 cut(s)	674, 1050, 1630, 1789, 2705, 3356
Tsp45I	GTSAC	6 cut(s)	674, 1050, 1630, 1789, 2705, 3356
TspGWI	ACGGA	7 cut(s)	420, 494, 1533, 1682, 3108, 3178, 3344
TspRI	CASTG	2 cut(s)	1394, 3365
Tth111I	GACNNNGTC	2 cut(s)	2450, 3005
Van91I	CCANNNNNTGG	1 cut(s)	1507
VpaK11BI	GGWCC	4 cut(s)	370, 571, 785, 1643
VspI	ATTAAT	1 cut(s)	2612
XagI	CCTNNNNNAGG	1 cut(s)	140
XapI	RAATTY	7 cut(s)	203, 332, 526, 1716, 2636, 2691, 2843
XceI	RCATGY	1 cut(s)	981
XcmI	CCANNNNNNNNNTGG	1 cut(s)	3258
XhoI	CTCGAG	2 cut(s)	3146, 3276
XmiI	GTMKAC	2 cut(s)	3133, 3192
XmnI	GAANNNNTTC	2 cut(s)	1187, 1753
XspI	CTAG	7 cut(s)	150, 773, 1284, 1314, 1568, 2736, 3468
ZraI	GACGTC	1 cut(s)	401

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.