Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004616

Physical Location & Seq

Genomic Coordinates Reverse (-)

18178588 .. 18184089

Gene Structure 5502 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G43900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3951 bp

ATGGATATCATCAACAACAACCACCGTGACGAAAACGATGACGACGAAGAAGAAGCTCTCTCCGCCATGAGCTCTGTTCCTCCTCCTCGAAAAATCCATTCCTATAGCCACCAGCTTCGTGCCACCGGTCAAAAAGGTCACCACCGTCAACGTCAACACAGCCTCGACGACATTCCTAAAATCACTGAAATCGTCTCCGGTTGTGGTATCTCCGGCGATTCTTCCGATGACGAGTTCTATCCTTACGCCACCACCACCAATTCCTCATCTTTCCCTTTCACCGGAGGAGATACAGGAGATTCTGATGATTACTTGCACCAGCCTGAGATCGGAGAAGATTTTCAACCTCTTCCTGAATTCGTCGGATCCGGAGGCGGTGTTGGGATGTTTAAAGTCCCGACGCGGTCTCCTTTGCACTCGGCGCGTCCTCCTTGTTTAGAGTTGAGACCACATCCGTTGAAGGAGACTCAGGTTGGGAGATTCTTGAGGAACATTGCTTGTACGGAGACGCAATTGTGGGCTGGACAAGAGAGTGGTGTTAGATTCTGGAACTTTGATGATGCCTTTGAGCCAGGTTGTGGTTTAAGCGGCCGTGTACAGAGAGGTGATGAGGATGCTGCACCGTTTCAAGAGTCGGCTAGTACTTCTCCCACCACTTGTTTGATGGTTGATAATGGGAATAGGCTTGTTTGGAGTGGTCATAAAGATGGAAAGATTCGGTCTTGGAAGATGGATTATGTGCTTGATGATGGTGATGATTCTCCTTTCAAGGAAGGTCTAGCTTGGCAAGCTCATAAGGGTCCTGTCAATTCCGTAATCATGAGTTCTTATGGCGATTTGTGGTCATGTTCAGAAGGTGGTGTGATAAAGATATGGACTTGGGAATCTATGGAGAAATCTCTTTCGCTTAGGTTGGAGGAGAAGCATATGGCTGCTTTGTTGGTGGAAAGGTCAGGGATTGATCTCAGGGCTCAAGTTACTGTCAACGGGACTTGCAATATATCTTCCTCTGAAGTCAAGTGTTTGTTAGCTGATAATGTAAGATCCAAAGTTTGGGCTGCTCAGCTTCAAACCTTCTCCTTGTGGGATGGTCGTACAAAAGAGTTACTGAAAGTGTTCAACTCAGAAGGTCAGACTGAAAACAGGGTTGACATGCCATTGGGGCAGGATCAGCCTGCTGCTGAAGATGAGATGAAGGCCAAAATTGCTTCCACTTCGAAGAAGGAGAAACCGCATGGATTCTTGCAACGCTCAAGGAATGCTATAATGGGAGCTGCGGATGCTGTTAGAAGGGTTGCAACAAGAGGAGGAGGGGCTTATGAAGATGCCAAAAGAACAGAAGCCATGGTTTTAGCCGGGGATGGCATGATTTGGACCGGCTGCACAAATGGATTGCTTATACAATGGGACGGAAATGGAAACCGGTTGCAAGATTTCCGTCACCATCAATGTGCTGTACTGTGTTTCTGCACGTTCGGGGAAAGGATATACATTGGTTATGTTAGTGGTCACATCCAGATAATTGATCTCGAAGGTAATCTAATCGCGGGATGGGTTGCACATAATAACGCAGTGATTAAGATGGCAGCAGCCGATGGCTACATTTTCAGCTTAGCCACTCATGGTGGTATACGTGGATGGCCTGTGATTTCTCCTGGGCCTCTTGACGGGATAATAAGGTCGGAACTGGCTGAAAAAGAACGGACATATGCTCAGACAGACAGTGTTAGGATTCTGACTGGTTCATGGAATGTTGGCCAGGGAAAAGCTTCCCATGATGCGCTTATGTCTTGGTTAGGCTCTGTAGCATCAGATGTTGGTATTCTTGTCGTAGGCTTGCAAGAAGTAGAGATGGGTGCTGGGTTTTTGGCAATGTCAGCTGCTAAAGAATCGGTAGGAGGAAACGAAGGGAGTACGATAGGGCAGTACTGGATAGACACAATAGGGAAAACCTTAGACGAAAAAGCAGTGTTTGAACGCATGGGATCAAGGCAGTTAGCTGGTTTGCTCATTTCACTTTGGGTGAGGAAGAATCTGAGAACCCATGTAGGCGATATTGATGTTGCAGCAGTTCCATGTGGTTTTGGACGCGCAATAGGAAACAAGGGAGGTGTAGGTTTGAGAATTAGGGTCTTTGATCGGATTATGTGCTTCATCAACTGTCACTTGGCTGCTCATCTAGAAGCTGTAAACCGCAGAAATGCTGATTTTGATCACATATACAAAACAATGTCCTTTACCCGGTCATCAAATGCTCATAATGCACCAGCCGCTGGTGTGTCTACCGGTTCTCATACCACAAAGAGCGCAAATAATGCAAACGTTAACACAGAAGAGACAAAACAGGACCTAGCTGAGGCGGACATGGTTGTATTTTTTGGTGATTTCAACTACCGCCTCTTTGGTATATCATATGATGAAGCTAGGGACTTTGTCTCACAAAGAAGCTTCGATTGGCTTAGAGAAAAAGATCAGCTCAGGGCAGAGATGAAAGCTGGAAGAGTATTCCAAGGAATGCGTGAAGCCATCATTACATTCCCTCCAACTTATAAGTTTGAAAGACACCGGCCTGGCTTAGGAGGGTACGATTCGGGTGAGAAAAAGCGGATTCCTGCATGGTGTGACAGAGTAATATTCAGAGACACGCGTACGAGTCCAGAATCTGAGTGCAGTTTAGACTGTCCTGTTGTTGCTTCGATTATGTTGTATGATGCTTGTATGGATGTGACAGAGAGTGATCACAAACCGGTCCGTTGCAAATTCCATGTCAAGATTGAGCATGTTGATAGATCGGTAAGGAGACAAGAGTTTGGGAGAATCATCAAGACCAACGAGAAAGTCAGAGCGTTGCTCAACGACCTACGTTATGTACCAGAGACAATTGTCAGCAGCAACAGCATCGTTCTCCAGAACCAAGACACCTTCGTGCTTCGCATCACCAACAAATGCGTCAAGGAAAACGCTGTGTTCAGGATCTTGTGCGAAGGGCAGAGTACAGTGAGAGAAGACGAAGACACACTTGAGTTACATCCGTTAGGATCATTCGGTTTCCCACGGTGGCTCGAGGTAATGCCAGCTGCAGGAACTATAAAACCGGATAGTTCAGTGGAGGTATCGGTTCACCATGAGGAGTTCCATACATTAGAAGAGTTTGTAGATGGGATTCCTCAGAATTGGTGGTGTGAGGACACACGGGATAAAGAAGCAATACTTGTGGTGAATGTACAAGGAGGTTGTTCGACTGAGACTGTGTGCCACCGGGTCCATGTTCGGCACTGCTTCTCGGCTAAAAATCTTAGGATCGACTCCAATCCATCTAACTCCAAATCTCAGAGTTTGAAGAAGAACGAAGGAGATTCCAACTCAAAGTCTTCGAAGAAGAGCGATGGAGATTCTAACTCCAAGTCCTCGAAGAAGAGCGATGGGGATTCTAACTCCAAGTCTTCGAAGAAGAGCGATGGGGATTCCAACTCCAAGTCTTCGAAGAAGAGCGACGGGGATTCCAACTCCAAGTCTTCGAAGAAGAGCGATGGGGATTCCAACTCCAAGTCTTCGAAGAAGAGCGATGGAGACTCCAACTCCAAGTCTTCGAAGAAGAGTGATGGAGACTCCTGCTCCAAGTCACAGAAGAAGAGCGATGGAGACACCAACTCCAAGTCTCAGAAGAAGGGCGATGGAGATTCGAGCTCCAAGTCTCACAAGAAGAACGATGGAGATTCGAGCTCCAAGTCTCACAAGAAGAACGATGGAGATTCAAGCTCTAAGTCTCACAAGAAGAGCGATGGAGATTCGAGCTCTAAGTCTCACAAGAAGAGCGAAGGAGACTCCAGTTCTAAGTCTCACAAGAAGAACGATGGAGATTCTTCAAGCTCATACAAGTCGCAGAGTGGGAAGAAAAACAGTAACTCGTCAACTGTAGAGGAGAGCCGGAATAACCACAACAAACGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005975 GO:0006066 GO:0006793 GO:0006796 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0007584 GO:0008150 GO:0008152 GO:0009056 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009611 GO:0009628 GO:0009629 GO:0009630 GO:0009637 GO:0009719 GO:0009725 GO:0009737 GO:0009743 GO:0009756 GO:0009846 GO:0009856 GO:0009888 GO:0009987 GO:0009991 GO:0010033 GO:0010087 GO:0010182 GO:0010252 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019637 GO:0019751 GO:0022414 GO:0022622 GO:0023052 GO:0031667 GO:0032501 GO:0032502 GO:0033993 GO:0042221 GO:0042578 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043647 GO:0044237 GO:0044238 GO:0044262 GO:0044281 GO:0044282 GO:0044424 GO:0044464 GO:0044706 GO:0046030 GO:0046164 GO:0046174 GO:0046434 GO:0046838 GO:0046855 GO:0048364 GO:0048731 GO:0048856 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051716 GO:0052658 GO:0052745 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071322 GO:0071545 GO:0071704 GO:0097305 GO:0099402 GO:1901575 GO:1901615 GO:1901616 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Exo_endo_phos

Protein Analysis

1316

Amino Acids

144.73

Weight (kDa)

6.63

Isoelectric Point (pI)

49.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_IP5PC_F	PF23754	153 - 547	1.1e-227	IP5P C-F beta-propeller
Exo_endo_phos2	PF22669	582 - 918	2e-63	Endonuclease/Exonuclease/phosphatase family 2
Ig-like_IP5PC_F	PF23755	957 - 1093	1.8e-70	IP5P C-F Ig-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004616)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05630 AT1G05630 AT1G05630 AT2G31830 AT2G31830 AT2G31830 AT2G43900 AT2G43900
fragaria_vesca	FvH4_5g18650 FvH4_5g18650 FvH4_5g18650 FvH4_5g18650
malus_domestica	MD00G1087600.v1.1 MD15G1143600.v1.1
prunus_persica	Prupe.7G062000_v2.0.a1
pyrus_communis	pycom15g12950 pycom15g12960 pycom15g12970 pycom290g00230
rosa_chinensis	RchiOBHm_Chr7g0176851
rosa_laevigata	RLG00000005579
rosa_multiflora	Rmu_co8238923.1_g000001 Rmu_sc0005310.1_g000054 Rmu_sc0027976.1_g000001
rosa_roxburghii	Rroxscaffold_3G00276340
rosa_rugosa	Rorug06G0401200
rosa_samantha	Rh7AG000500 Rh7BG000900 Rh7CG000500 Rh7DG000700
rosa_wichuraiana	Rw7G000040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2550
AccB7I	CCANNNNNTGG	3 cut(s)	578, 1053, 2273
AccI	GTMKAC	2 cut(s)	1630, 2282
AccII	CGCG	5 cut(s)	403, 424, 1547, 2091, 2647
AccIII	TCCGGA	1 cut(s)	368
AclI	AACGTT	2 cut(s)	2322, 3946
AclWI	GGATC	8 cut(s)	360, 373, 1038, 1176, 1993, 2981, 3046, 3308
AcoI	YGGCCR	2 cut(s)	589, 1756
AcsI	RAATTY	2 cut(s)	356, 2759
AcuI	CTGAAG	2 cut(s)	1032, 1203
AflIII	ACRYGT	1 cut(s)	2645
AgeI	ACCGGT	4 cut(s)	125, 1422, 2285, 2746
AjnI	CCWGG	4 cut(s)	571, 1654, 1758, 2569
AjuI	GAANNNNNNNTTGG	2 cut(s)	2437, 2469
AleI	CACNNNNGTG	1 cut(s)	2924
Alw21I	GWGCWC	4 cut(s)	74, 3689, 3725, 3797
AlwI	GGATC	8 cut(s)	360, 373, 1038, 1176, 1993, 2981, 3046, 3308
AlwNI	CAGNNNCTG	2 cut(s)	2273, 2663
Ama87I	CYCGRG	1 cut(s)	3062
Aor13HI	TCCGGA	1 cut(s)	368
AoxI	GGCC	6 cut(s)	589, 1197, 1640, 1658, 1756, 2567
ApoI	RAATTY	2 cut(s)	356, 2759
ArsI	GACNNNNNNTTYG	2 cut(s)	2751, 2783
AsiGI	ACCGGT	4 cut(s)	125, 1422, 2285, 2746
Asp700I	GAANNNNTTC	3 cut(s)	339, 1115, 1768
AspLEI	GCGC	4 cut(s)	424, 1783, 2093, 2309
AspS9I	GGNCC	6 cut(s)	800, 1374, 1658, 2347, 2749, 3262
AsuC2I	CCSGG	3 cut(s)	1357, 2242, 3260
AsuII	TTCGAA	7 cut(s)	1217, 3374, 3446, 3482, 3518, 3554, 3590
AvaI	CYCGRG	1 cut(s)	3062
AvaII	GGWCC	5 cut(s)	800, 1374, 2347, 2749, 3262
BalI	TGGCCA	1 cut(s)	1758
BamHI	GGATCC	1 cut(s)	365
BanII	GRGCYC	5 cut(s)	74, 973, 3689, 3725, 3797
BbsI	GAAGAC	8 cut(s)	3012, 3018, 3363, 3435, 3471, 3507, 3543, 3579
Bbv12I	GWGCWC	4 cut(s)	74, 3689, 3725, 3797
BbvCI	CCTCAGC	1 cut(s)	2355
BceAI	ACGGC	1 cut(s)	576
BcgI	CGANNNNNNTGC	2 cut(s)	2881, 2915
BciT130I	CCWGG	4 cut(s)	573, 1656, 1760, 2571
BclI	TGATCA	2 cut(s)	2212, 2737
BcnI	CCSGG	3 cut(s)	1357, 2242, 3260
BfaI	CTAG	5 cut(s)	639, 779, 2180, 2351, 2424
BfmI	CTRYAG	4 cut(s)	103, 1803, 3078, 3915
BglI	GCCNNNNNGGC	1 cut(s)	1162
BlpI	GCTNAGC	2 cut(s)	1062, 1612
BmcAI	AGTACT	2 cut(s)	643, 1928
Bme1390I	CCNGG	7 cut(s)	573, 1357, 1656, 1760, 2242, 2571, 3260
Bme18I	GGWCC	5 cut(s)	800, 1374, 2347, 2749, 3262
BmeT110I	CYCGRG	1 cut(s)	3062
BmgT120I	GGNCC	6 cut(s)	800, 1374, 1658, 2347, 2749, 3262
BmiI	GGNNCC	3 cut(s)	367, 801, 3263
BmrFI	CCNGG	7 cut(s)	573, 1357, 1656, 1760, 2242, 2571, 3260
BmsI	GCATC	9 cut(s)	550, 604, 1270, 1315, 1768, 1817, 2701, 2907, 2943
BoxI	GACNNNNGTC	1 cut(s)	2882
BpiI	GAAGAC	8 cut(s)	3012, 3018, 3363, 3435, 3471, 3507, 3543, 3579
BplI	GAGNNNNNCTC	2 cut(s)	2835, 2867
BpmI	CTGGAG	2 cut(s)	2891, 3811
Bpu10I	CCTNAGC	4 cut(s)	908, 2355, 2477, 2575
Bpu1102I	GCTNAGC	2 cut(s)	1062, 1612
Bpu14I	TTCGAA	7 cut(s)	1217, 3374, 3446, 3482, 3518, 3554, 3590
BpuEI	CTTGAG	4 cut(s)	505, 957, 1237, 3041
BpuMI	CCSGG	3 cut(s)	1357, 2242, 3260
BsaAI	YACGTR	1 cut(s)	1634
BsaBI	GATNNNNATC	1 cut(s)	2211
BsaI	GGTCTC	2 cut(s)	411, 439
BsaJI	CCNNGG	6 cut(s)	1344, 1356, 1655, 1759, 2509, 3053
BsaWI	WCCGGW	8 cut(s)	125, 197, 281, 368, 1422, 2285, 2746, 3094
Bse118I	RCCGGY	6 cut(s)	125, 1376, 1422, 2285, 2565, 2746
Bse1I	ACTGG	4 cut(s)	1692, 1744, 1934, 3828
Bse3DI	GCAATG	2 cut(s)	492, 1878
Bse8I	GATNNNNATC	1 cut(s)	2211
BseAI	TCCGGA	1 cut(s)	368
BseBI	CCWGG	4 cut(s)	573, 1656, 1760, 2571
BseDI	CCNNGG	6 cut(s)	1344, 1356, 1655, 1759, 2509, 3053
BseJI	GATNNNNATC	1 cut(s)	2211
BseMI	GCAATG	2 cut(s)	492, 1878
BseNI	ACTGG	4 cut(s)	1692, 1744, 1934, 3828
BseRI	GAGGAG	8 cut(s)	72, 75, 300, 932, 1320, 1323, 3143, 3935
BseX3I	CGGCCG	1 cut(s)	589
BseYI	CCCAGC	1 cut(s)	1859
BsgI	GTGCAG	4 cut(s)	603, 1366, 1453, 2689
Bsh1236I	CGCG	5 cut(s)	403, 424, 1547, 2091, 2647
Bsh1285I	CGRYCG	1 cut(s)	592
BshFI	GGCC	6 cut(s)	591, 1199, 1642, 1660, 1758, 2569
BshTI	ACCGGT	4 cut(s)	125, 1422, 2285, 2746
BsiEI	CGRYCG	1 cut(s)	592
BsiHKAI	GWGCWC	4 cut(s)	74, 3689, 3725, 3797
BsiHKCI	CYCGRG	1 cut(s)	3062
BsiWI	CGTACG	1 cut(s)	2648
BslFI	GGGAC	4 cut(s)	380, 1003, 1421, 2441
BsmBI	CGTCTC	2 cut(s)	199, 500
BsmFI	GGGAC	4 cut(s)	380, 1003, 1421, 2441
BsmI	GAATGC	2 cut(s)	1264, 2520
BsnI	GGCC	6 cut(s)	591, 1199, 1642, 1660, 1758, 2569
Bso31I	GGTCTC	2 cut(s)	411, 439
BsoBI	CYCGRG	1 cut(s)	3062
Bsp119I	TTCGAA	7 cut(s)	1217, 3374, 3446, 3482, 3518, 3554, 3590
Bsp1286I	GDGCHC	5 cut(s)	74, 973, 3689, 3725, 3797
Bsp13I	TCCGGA	1 cut(s)	368
Bsp1407I	TGTACA	2 cut(s)	595, 3223
Bsp1720I	GCTNAGC	2 cut(s)	1062, 1612
Bsp19I	CCATGG	1 cut(s)	1344
BspANI	GGCC	6 cut(s)	591, 1199, 1642, 1660, 1758, 2569
BspEI	TCCGGA	1 cut(s)	368
BspFNI	CGCG	5 cut(s)	403, 424, 1547, 2091, 2647
BspHI	TCATGA	1 cut(s)	819
BspLI	GGNNCC	3 cut(s)	367, 801, 3263
BspMAI	CTGCAG	1 cut(s)	3082
BspPI	GGATC	8 cut(s)	360, 373, 1038, 1176, 1993, 2981, 3046, 3308
BspQI	GCTCTTC	9 cut(s)	3374, 3410, 3446, 3482, 3518, 3554, 3626, 3770, 3806
BspT104I	TTCGAA	7 cut(s)	1217, 3374, 3446, 3482, 3518, 3554, 3590
BspTNI	GGTCTC	2 cut(s)	411, 439
BsrDI	GCAATG	2 cut(s)	492, 1878
BsrFI	RCCGGY	6 cut(s)	125, 1376, 1422, 2285, 2565, 2746
BsrGI	TGTACA	2 cut(s)	595, 3223
BsrI	ACTGG	4 cut(s)	1692, 1744, 1934, 3828
BssAI	RCCGGY	6 cut(s)	125, 1376, 1422, 2285, 2565, 2746
BssECI	CCNNGG	6 cut(s)	1344, 1356, 1655, 1759, 2509, 3053
BssNAI	GTATAC	1 cut(s)	1631
BssT1I	CCWWGG	2 cut(s)	1344, 2509
Bst1107I	GTATAC	1 cut(s)	1631
Bst2UI	CCWGG	4 cut(s)	573, 1656, 1760, 2571
BstAPI	GCANNNNNTGC	1 cut(s)	2315
BstAUI	TGTACA	2 cut(s)	595, 3223
BstBAI	YACGTR	1 cut(s)	1634
BstBI	TTCGAA	7 cut(s)	1217, 3374, 3446, 3482, 3518, 3554, 3590
BstC8I	GCNNGC	4 cut(s)	789, 1176, 1838, 3075
BstDSI	CCRYGG	2 cut(s)	1344, 3053
BstEII	GGTNACC	1 cut(s)	137
BstENI	CCTNNNNNAGG	2 cut(s)	2354, 2574
BstFNI	CGCG	5 cut(s)	403, 424, 1547, 2091, 2647
BstHHI	GCGC	4 cut(s)	424, 1783, 2093, 2309
BstMCI	CGRYCG	1 cut(s)	592
BstNI	CCWGG	4 cut(s)	573, 1656, 1760, 2571
BstNSI	RCATGY	2 cut(s)	1156, 2783
BstPAI	GACNNNNGTC	1 cut(s)	2882
BstPI	GGTNACC	1 cut(s)	137
BstSCI	CCNGG	7 cut(s)	571, 1355, 1654, 1758, 2240, 2569, 3258
BstSFI	CTRYAG	4 cut(s)	103, 1803, 3078, 3915
BstUI	CGCG	5 cut(s)	403, 424, 1547, 2091, 2647
BstV2I	GAAGAC	8 cut(s)	3012, 3018, 3363, 3435, 3471, 3507, 3543, 3579
BstX2I	RGATCY	3 cut(s)	365, 1043, 2973
BstYI	RGATCY	3 cut(s)	365, 1043, 2973
BstZ17I	GTATAC	1 cut(s)	1631
BstZI	CGGCCG	1 cut(s)	589
BsuRI	GGCC	6 cut(s)	591, 1199, 1642, 1660, 1758, 2569
BtgI	CCRYGG	2 cut(s)	1344, 3053
BtgZI	GCGATG	8 cut(s)	3399, 3435, 3471, 3543, 3579, 3651, 3687, 3795
BtsI	GCAGTG	3 cut(s)	1578, 1974, 3274
BtsIMutI	CAGTG	7 cut(s)	183, 1578, 1729, 1974, 3003, 3111, 3274
Cac8I	GCNNGC	4 cut(s)	789, 1176, 1838, 3075
CaiI	CAGNNNCTG	2 cut(s)	2273, 2663
CciI	TCATGA	1 cut(s)	819
CfoI	GCGC	4 cut(s)	424, 1783, 2093, 2309
Cfr10I	RCCGGY	6 cut(s)	125, 1376, 1422, 2285, 2565, 2746
Cfr13I	GGNCC	6 cut(s)	800, 1374, 1658, 2347, 2749, 3262
CpoI	CGGWCCG	1 cut(s)	2749
CseI	GACGC	5 cut(s)	409, 413, 517, 2097, 2938
CspAI	ACCGGT	4 cut(s)	125, 1422, 2285, 2746
CspCI	CAANNNNNGTGG	4 cut(s)	438, 473, 3195, 3230
CspI	CGGWCCG	1 cut(s)	2749
DraI	TTTAAA	1 cut(s)	391
EaeI	YGGCCR	2 cut(s)	589, 1756
EagI	CGGCCG	1 cut(s)	589
EciI	GGCGGA	2 cut(s)	52, 2375
Ecl136II	GAGCTC	4 cut(s)	72, 3687, 3723, 3795
EclXI	CGGCCG	1 cut(s)	589
Eco130I	CCWWGG	2 cut(s)	1344, 2509
Eco24I	GRGCYC	5 cut(s)	74, 973, 3689, 3725, 3797
Eco31I	GGTCTC	2 cut(s)	411, 439
Eco32I	GATATC	1 cut(s)	7
Eco47I	GGWCC	5 cut(s)	800, 1374, 2347, 2749, 3262
Eco52I	CGGCCG	1 cut(s)	589
Eco53kI	GAGCTC	4 cut(s)	72, 3687, 3723, 3795
Eco57I	CTGAAG	2 cut(s)	1032, 1203
Eco88I	CYCGRG	1 cut(s)	3062
Eco91I	GGTNACC	1 cut(s)	137
EcoICRI	GAGCTC	4 cut(s)	72, 3687, 3723, 3795
EcoNI	CCTNNNNNAGG	2 cut(s)	2354, 2574
EcoO109I	RGGNCCY	2 cut(s)	800, 2347
EcoO65I	GGTNACC	1 cut(s)	137
EcoRI	GAATTC	1 cut(s)	356
EcoRII	CCWGG	4 cut(s)	571, 1654, 1758, 2569
EcoRV	GATATC	1 cut(s)	7
EcoT14I	CCWWGG	2 cut(s)	1344, 2509
EcoT38I	GRGCYC	5 cut(s)	74, 973, 3689, 3725, 3797
ErhI	CCWWGG	2 cut(s)	1344, 2509
Esp3I	CGTCTC	2 cut(s)	199, 500
FalI	AAGNNNNNCTT	4 cut(s)	3003, 3035, 3195, 3227
FaqI	GGGAC	4 cut(s)	380, 1003, 1421, 2441
FauI	CCCGC	1 cut(s)	1540
FauNDI	CATATG	3 cut(s)	927, 1708, 2413
FbaI	TGATCA	2 cut(s)	2212, 2737
FblI	GTMKAC	2 cut(s)	1630, 2282
FriOI	GRGCYC	5 cut(s)	74, 973, 3689, 3725, 3797
FspBI	CTAG	5 cut(s)	639, 779, 2180, 2351, 2424
GlaI	GCGC	4 cut(s)	423, 1782, 2092, 2308
GsaI	CCCAGC	1 cut(s)	1863
GsuI	CTGGAG	2 cut(s)	2891, 3811
HaeIII	GGCC	6 cut(s)	591, 1199, 1642, 1660, 1758, 2569
HgaI	GACGC	5 cut(s)	409, 413, 517, 2097, 2938
HhaI	GCGC	4 cut(s)	424, 1783, 2093, 2309
Hin6I	GCGC	4 cut(s)	422, 1781, 2091, 2307
HinP1I	GCGC	4 cut(s)	422, 1781, 2091, 2307
HincII	GTYRAC	6 cut(s)	149, 155, 985, 1150, 2326, 3912
HindII	GTYRAC	6 cut(s)	149, 155, 985, 1150, 2326, 3912
HindIII	AAGCTT	2 cut(s)	1767, 2446
HpaI	GTTAAC	1 cut(s)	2326
Hpy99I	CGWCG	5 cut(s)	47, 170, 365, 403, 3497
HpyCH4IV	ACGT	6 cut(s)	151, 1472, 1633, 2322, 2863, 3946
HpySE526I	ACGT	6 cut(s)	151, 1472, 1633, 2322, 2863, 3946
HspAI	GCGC	4 cut(s)	422, 1781, 2091, 2307
Kpn2I	TCCGGA	1 cut(s)	368
Ksp22I	TGATCA	2 cut(s)	2212, 2737
KspAI	GTTAAC	1 cut(s)	2326
LguI	GCTCTTC	9 cut(s)	3374, 3410, 3446, 3482, 3518, 3554, 3626, 3770, 3806
LmnI	GCTCC	4 cut(s)	1271, 3620, 3692, 3728
LweI	GCATC	9 cut(s)	550, 604, 1270, 1315, 1768, 1817, 2701, 2907, 2943
MaeI	CTAG	5 cut(s)	639, 779, 2180, 2351, 2424
MaeII	ACGT	6 cut(s)	151, 1472, 1633, 2322, 2863, 3946
MfeI	CAATTG	2 cut(s)	512, 2880
MflI	RGATCY	3 cut(s)	365, 1043, 2973
MhlI	GDGCHC	5 cut(s)	74, 973, 3689, 3725, 3797
MlsI	TGGCCA	1 cut(s)	1758
MluI	ACGCGT	1 cut(s)	2645
MluNI	TGGCCA	1 cut(s)	1758
MlyI	GAGTC	7 cut(s)	460, 641, 2662, 3299, 3566, 3602, 3818
MmeI	TCCRAC	9 cut(s)	343, 894, 1662, 2567, 3384, 3492, 3528, 3564, 3600
Mox20I	TGGCCA	1 cut(s)	1758
MroI	TCCGGA	1 cut(s)	368
MroXI	GAANNNNTTC	3 cut(s)	339, 1115, 1768
MscI	TGGCCA	1 cut(s)	1758
MseI	TTAA	4 cut(s)	390, 584, 1578, 2325
MslI	CAYNNNNRTG	3 cut(s)	705, 1449, 2924
Msp20I	TGGCCA	1 cut(s)	1758
MspA1I	CMGCKG	3 cut(s)	1880, 2273, 3077
MspR9I	CCNGG	7 cut(s)	573, 1357, 1656, 1760, 2242, 2571, 3260
MunI	CAATTG	2 cut(s)	512, 2880
Mva1269I	GAATGC	2 cut(s)	1264, 2520
MvaI	CCWGG	4 cut(s)	573, 1656, 1760, 2571
MvnI	CGCG	5 cut(s)	403, 424, 1547, 2091, 2647
NciI	CCSGG	3 cut(s)	1357, 2242, 3260
NcoI	CCATGG	1 cut(s)	1344
NdeI	CATATG	3 cut(s)	927, 1708, 2413
NlaIV	GGNNCC	3 cut(s)	367, 801, 3263
NmeAIII	GCCGAG	2 cut(s)	398, 3263
NmuCI	GTSAC	8 cut(s)	26, 137, 1439, 1508, 2162, 2621, 2725, 3621
NspI	RCATGY	2 cut(s)	1156, 2783
NspV	TTCGAA	7 cut(s)	1217, 3374, 3446, 3482, 3518, 3554, 3590
OliI	CACNNNNGTG	1 cut(s)	2924
PaeR7I	CTCGAG	1 cut(s)	3062
PagI	TCATGA	1 cut(s)	819
PciSI	GCTCTTC	9 cut(s)	3374, 3410, 3446, 3482, 3518, 3554, 3626, 3770, 3806
PcsI	WCGNNNNNNNCGW	1 cut(s)	42
PctI	GAATGC	2 cut(s)	1264, 2520
PdmI	GAANNNNTTC	3 cut(s)	339, 1115, 1768
Pfl23II	CGTACG	1 cut(s)	2648
PflFI	GACNNNGTC	2 cut(s)	403, 2432
PflMI	CCANNNNNTGG	3 cut(s)	578, 1053, 2273
PinAI	ACCGGT	4 cut(s)	125, 1422, 2285, 2746
PleI	GAGTC	7 cut(s)	460, 640, 2661, 3299, 3566, 3602, 3818
PpsI	GAGTC	7 cut(s)	460, 640, 2661, 3299, 3566, 3602, 3818
Ppu21I	YACGTR	1 cut(s)	1634
PpuMI	RGGWCCY	2 cut(s)	800, 2347
PshAI	GACNNNNGTC	1 cut(s)	2882
PsiI	TTATAA	1 cut(s)	2550
Psp124BI	GAGCTC	4 cut(s)	74, 3689, 3725, 3797
Psp1406I	AACGTT	2 cut(s)	2322, 3946
Psp5II	RGGWCCY	2 cut(s)	800, 2347
Psp6I	CCWGG	4 cut(s)	571, 1654, 1758, 2569
PspEI	GGTNACC	1 cut(s)	137
PspFI	CCCAGC	1 cut(s)	1859
PspGI	CCWGG	4 cut(s)	571, 1654, 1758, 2569
PspLI	CGTACG	1 cut(s)	2648
PspN4I	GGNNCC	3 cut(s)	367, 801, 3263
PspPI	GGNCC	6 cut(s)	800, 1374, 1658, 2347, 2749, 3262
PspPPI	RGGWCCY	2 cut(s)	800, 2347
PspXI	VCTCGAGB	1 cut(s)	3062
PstI	CTGCAG	1 cut(s)	3082
PstNI	CAGNNNCTG	2 cut(s)	2273, 2663
PsuI	RGATCY	3 cut(s)	365, 1043, 2973
PsyI	GACNNNGTC	2 cut(s)	403, 2432
PvuII	CAGCTG	2 cut(s)	1880, 3077
RseI	CAYNNNNRTG	3 cut(s)	705, 1449, 2924
Rsr2I	CGGWCCG	1 cut(s)	2749
RsrII	CGGWCCG	1 cut(s)	2749
SacI	GAGCTC	4 cut(s)	74, 3689, 3725, 3797
SapI	GCTCTTC	9 cut(s)	3374, 3410, 3446, 3482, 3518, 3554, 3626, 3770, 3806
SaqAI	TTAA	4 cut(s)	390, 584, 1578, 2325
Sau96I	GGNCC	6 cut(s)	800, 1374, 1658, 2347, 2749, 3262
ScaI	AGTACT	2 cut(s)	643, 1928
SchI	GAGTC	7 cut(s)	460, 641, 2662, 3299, 3566, 3602, 3818
ScrFI	CCNGG	7 cut(s)	573, 1357, 1656, 1760, 2242, 2571, 3260
SduI	GDGCHC	5 cut(s)	74, 973, 3689, 3725, 3797
SfaNI	GCATC	9 cut(s)	550, 604, 1270, 1315, 1768, 1817, 2701, 2907, 2943
SfcI	CTRYAG	4 cut(s)	103, 1803, 3078, 3915
Sfr274I	CTCGAG	1 cut(s)	3062
SfuI	TTCGAA	7 cut(s)	1217, 3374, 3446, 3482, 3518, 3554, 3590
SinI	GGWCC	5 cut(s)	800, 1374, 2347, 2749, 3262
SlaI	CTCGAG	1 cut(s)	3062
SmiMI	CAYNNNNRTG	3 cut(s)	705, 1449, 2924
SmlI	CTYRAG	5 cut(s)	484, 972, 1252, 3020, 3062
SmoI	CTYRAG	5 cut(s)	484, 972, 1252, 3020, 3062
SspI	AATATT	1 cut(s)	2634
SspMI	CTAG	5 cut(s)	639, 779, 2180, 2351, 2424
SstI	GAGCTC	4 cut(s)	74, 3689, 3725, 3797
StyD4I	CCNGG	7 cut(s)	571, 1355, 1654, 1758, 2240, 2569, 3258
StyI	CCWWGG	2 cut(s)	1344, 2509
TaiI	ACGT	6 cut(s)	154, 1475, 1636, 2325, 2866, 3949
TaqII	GACCGA	1 cut(s)	708
TatI	WGTACW	6 cut(s)	595, 641, 1456, 1926, 2993, 3223
TauI	GCSGC	2 cut(s)	591, 2273
Tru1I	TTAA	4 cut(s)	390, 584, 1578, 2325
Tru9I	TTAA	4 cut(s)	390, 584, 1578, 2325
TscAI	CASTG	7 cut(s)	190, 1578, 1729, 1974, 3003, 3111, 3281
TseFI	GTSAC	8 cut(s)	26, 137, 1439, 1508, 2162, 2621, 2725, 3621
Tsp45I	GTSAC	8 cut(s)	26, 137, 1439, 1508, 2162, 2621, 2725, 3621
TspDTI	ATGAA	6 cut(s)	1208, 1335, 1734, 2143, 2433, 2504
TspGWI	ACGGA	8 cut(s)	444, 518, 802, 1425, 1427, 1717, 2741, 3021
TspRI	CASTG	7 cut(s)	190, 1578, 1729, 1974, 3003, 3111, 3281
Tth111I	GACNNNGTC	2 cut(s)	403, 2432
Van91I	CCANNNNNTGG	3 cut(s)	578, 1053, 2273
VpaK11BI	GGWCC	5 cut(s)	800, 1374, 2347, 2749, 3262
XagI	CCTNNNNNAGG	2 cut(s)	2354, 2574
XapI	RAATTY	2 cut(s)	356, 2759
XbaI	TCTAGA	1 cut(s)	2179
XceI	RCATGY	2 cut(s)	1156, 2783
XcmI	CCANNNNNNNNNTGG	1 cut(s)	661
XhoI	CTCGAG	1 cut(s)	3062
XmiI	GTMKAC	2 cut(s)	1630, 2282
XmnI	GAANNNNTTC	3 cut(s)	339, 1115, 1768
XspI	CTAG	5 cut(s)	639, 779, 2180, 2351, 2424
ZrmI	AGTACT	2 cut(s)	643, 1928

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.