Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0004616

Physical Location & Seq

Genomic Coordinates Reverse (-)

10723647 .. 10732719

Gene Structure 9073 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g18650.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3426 bp

ATGGACGAGAGGAGTGATGATGAGGACAGGGATGCATTGGCAGGGTTAAGCTCTGCTCCTGCTCCTCCCCGGAAATCGCACTCATTAAGCCAGCAACTGCGTGGAACCGCAGCTCAGAAACGGCACCAACTACGCAAGCATAGCATGGACGATGTGCAGATACCAAAGAACGTTGTTAATGCTGACCCCTACTACGATTCTTCGGACGATGATTTCTTTCCTTACTCCTCCAACACCACCACTGCATCCTCCATCGTTCCTACAAGTGCCGAGGAGTACGTCTCCTCATCGCAGAGATTAGACCAAGGCCTATGCATGGAGGGTGGTATTGATCATTCTAGCCCTGGCAGCGCCAAGGAAAGCCAGCCATTATCTGAATTCATAGGGAGCGGCGGCGGAGCAGGAATCTTTAAGTTTCCAACGAGAGCTGCAGTGCATCCAGGTAGGCCTCCATGTTTGGAGTTGAGACCTCACCCTTTGAGGGAGACTCAGGTAGGGAGGTTCCTTAGAACCATTGCGTGCACCGAGACACAACTCTGGGCTGGTCAGGAGGGTGGAGTCAGGGTCTGGAATCTTAAGGATGTATTTGAACCAGGGTGCGGTCTTGGTGGCAGGGTCTTGAGGGGTGATGAGGATGCAGCGCCTTACTATGAATCTGCAAACACCTCTCCTGCCATGTCTTTGATGGTTGATGTTGGGAATAAGTTGATATGGTCCGGGCATAAGGATGGAAAGATTAGGTCGTGGAAGATGGATCAGCCTTTGGATGCTGCTACTCCTTTCAAGGAAGGGCTCTCATGGCAGGCGCACCGCGGTCCTGTTCTTGCCATGGTCATGACTTCTTATGGTGATATGTGGTCAGGTTCCGAGGGTGGTGTTATTAAGATCTGGCCATGGGAATCGATTGAAAAATCTCTTTCTCTAAAGCCAGAGGAAAGGCATATGGCAGCTTTACTGGTGGAGAGGTCATGCATTGACCTTAGGAGCCAGGTTACTGTAAATGGTGTCTGCAGTATATCTTCTCAGGATGTGAAGGGTTTGTTATCTGATAATTTTAGAGCAAGAGTTTGGTGCACTGGGTCTATGTCCTTCTCATTGTGGGATGCCCGTTCACGAGAGCTTGTGAAAGTGTTTAATATAGAAGGTCAGATTGAGAATAGAGTTGACATGTCATCTGTGCAGCAAGATCAAGCATCAGTGGAAGATGAGATGAAGGTGAAATTTGTTTCAAATTCAAAGAAGGACAAACCGCATGGCTTTTTGCAGCGGTCACGCAATGCTATAATGGGGGCTGCAGATGCTGTTCGCCGAGTTGCAACCAGAGGGGCAGGGGCATTTGTAGAAGAAACCAAGAAGACAGAAGCACTAGTGCTAACTGCAGATGGCATGATATGGAGCGGATGTACAAATGGTTTATTGATACAGTGGGATGGGAATGGAAACCGTGTTCGAGATTTTACTCACTTTCCTTCTGCTGTCCAGTGCTTTTGCACTTTTGGGGCACGCATATATGTAGGATATGTGAGTGGTCACATTCAGGTCTTGGATCTTGAGGGAAATGTGATTGCAGGATGGGTAGCACACAGTAGTCCGGTCATAAAATTGGCAGCTTGCCATGGAACTGGTTGTGTTTATAGCTTGGCTACTCATGGTGGTATACGTGGGTGGAACATCAAATCTCCAGGACCTAGTGATGACATACTACGCTCCGAATTGGCTGCTAAGGAAAGTTCATACACTACAAGAGACAATGTAAGAATTTTAGTTGGTACATGGAATGTTGGTCAAGGAAGAGCATCTCATGAGTCACTCATGTCATGGTTGGGTTCTGCTGTGCCGGATGTTGGTATTGTAGTTGTTGGCTTGCAAGAAGTAGAAATGGGTGCAGGTTTTCTGGCAATGTCTGCAGCAAAAGAAACTGTAGGGCTTGAAGGGAGTTCTGTTGGGCACTGGTGGCTGGATAATATAGGAAAGGCTTTAGAAGAGGGAAAAACTTTTGAACGTATGGGTTCTAGGCAACTAGCAGGCTTGCTCATATCTCTTTGGGTAAGAAAGAACCTTAGAACCCACGTCGGAGATATAGATGCTGGAGCAGTTCCATGCGGCTTTGGTCGTGCCATTGGTAACAAGGGAGGTGTAGGTTTGAGAATCAGAGTCTATGATCGGATAATGTGCTTTGTGAACTGTCACTTGGCTGCACATTTAGAAGCTGTCAATCGCCGCAATGCTGATTTTGATCACATTTATCGAAATATGGTCTTCAATCGGTCATCTCTACTTAACACAGCAGCTGCTGGTGTGTCTACTACTGTCAACACAGTTCGGACTCCAAATGCTGCAGGCAACAACTCTGAAGAACCAGCAAGACCTGAATTAGCCGGAGCTGATGTGGTTGTTTTTCTGGGTGATTTCAATTACCGACTTTTTGGTATATCTTATGATGAAGCAAGGGACTTCGTTTCCCAAAGATGCTTTGATTGGCTCAGAGAAAAAGATCAGCTCAGAGCAGAGATGAAAGCTGGGAAAGTTTTCCAAGGGATGCGTGAGGCACTCATCAGATTCCCTCCAACATACAAGTTTGAAAGGCACCAAGCAGGTTTAGCAGGATATGACTCTGGTGAGAAGAAACGAATTCCTGCATGGTGTGACAGAATAATATATCGTGATAATCGATCAGTTCCAGTGTCTGAGTGCAGTTTAGAGTGCCCTGTGGTCTCAGCAATTTTACAGTATGATGCATGCATGGATGTGACTGACAGTGATCACAAACCTGTCCGGTGTAAATTAGCTCTACAAATTGCCCATGTTGATAGATCGATAAGGAGAATGGAGTTTGGGGAAATTATTAGGAACAATGAGAAAATTAAGTCTATCCTTGAAGAAATGAATCATGTTCCTGAAACTCATGTGAACACAAACAACATAATCCTTCAAAGTCAGGATACATTCGTGTTGCGTATCACCAATAAATTTATGAAGGATATGGCCATCTTTAAAATCATTTGTGAAGGTCAGTCGACTGTCAAGGAGGATGGAGAAGAGGCTGATTATCGCCCAAGAGGTGCCAACGGACTTCCCAGATGGCTGGAGGTCACACCAGCAGCTGGCATAATTAAACCTGAACAATCTGCGGAAGTGTCCGTTCATCATGAAGAGTTCCATACTTCAGAAGAATTTGTTGATGGCATCCCTCAAAATTGGTGGTGTGAAGACACTCGTGATAAGGAAGTGATTTTGCTGGTGAAAGTCCAGGGTAGCTGTTCAGCGCAAACATACACTCACCGAATCCGTGTGAGGCATTGCTTCTCAGCCAAGACAGTACCACGCATTGACATTAAATCCAACAGCTCCAGAAGAGGCCAGCCAAGTCCAAAACAGAAGCAACCTGCTAACAGTTCAAGTGAAACTAACTCAAAGAAACATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005975 GO:0006066 GO:0006793 GO:0006796 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0007584 GO:0008150 GO:0008152 GO:0009056 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009611 GO:0009628 GO:0009629 GO:0009630 GO:0009637 GO:0009719 GO:0009725 GO:0009737 GO:0009743 GO:0009756 GO:0009846 GO:0009856 GO:0009888 GO:0009987 GO:0009991 GO:0010033 GO:0010087 GO:0010182 GO:0010252 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019637 GO:0019751 GO:0022414 GO:0022622 GO:0023052 GO:0031667 GO:0032501 GO:0032502 GO:0033993 GO:0042221 GO:0042578 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043647 GO:0044237 GO:0044238 GO:0044262 GO:0044281 GO:0044282 GO:0044424 GO:0044464 GO:0044706 GO:0046030 GO:0046164 GO:0046174 GO:0046434 GO:0046838 GO:0046855 GO:0048364 GO:0048731 GO:0048856 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051716 GO:0052658 GO:0052745 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071322 GO:0071545 GO:0071704 GO:0097305 GO:0099402 GO:1901575 GO:1901615 GO:1901616 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04070 map00562 map01100 map04070

Pfam Domains

Protein Families

Exo_endo_phos

Protein Analysis

1142

Amino Acids

126.15

Weight (kDa)

6.91

Isoelectric Point (pI)

49.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_IP5PC_F	PF23754	160 - 556	8.5e-226	IP5P C-F beta-propeller
Exo_endo_phos2	PF22669	590 - 960	1.7e-61	Endonuclease/Exonuclease/phosphatase family 2
Exo_endo_phos	PF03372	590 - 956	8.7e-06	Endonuclease/Exonuclease/phosphatase family
Ig-like_IP5PC_F	PF23755	999 - 1135	1.2e-71	IP5P C-F Ig-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0004616)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05630 AT1G05630 AT1G05630 AT2G31830 AT2G31830 AT2G31830 AT2G43900 AT2G43900
fragaria_vesca	FvH4_5g18650 FvH4_5g18650 FvH4_5g18650 FvH4_5g18650
malus_domestica	MD00G1087600.v1.1 MD15G1143600.v1.1
prunus_persica	Prupe.7G062000_v2.0.a1
pyrus_communis	pycom15g12950 pycom15g12960 pycom15g12970 pycom290g00230
rosa_chinensis	RchiOBHm_Chr7g0176851
rosa_laevigata	RLG00000005579
rosa_multiflora	Rmu_co8238923.1_g000001 Rmu_sc0005310.1_g000054 Rmu_sc0027976.1_g000001
rosa_roxburghii	Rroxscaffold_3G00276340
rosa_rugosa	Rorug06G0401200
rosa_samantha	Rh7AG000500 Rh7BG000900 Rh7CG000500 Rh7DG000700
rosa_wichuraiana	Rw7G000040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	1877, 2585, 3394
AccB1I	GGYRCC	3 cut(s)	123, 2586, 3062
AccB7I	CCANNNNNTGG	1 cut(s)	3104
AccBSI	CCGCTC	2 cut(s)	390, 1398
AccI	GTMKAC	3 cut(s)	1657, 2303, 3017
AccII	CGCG	1 cut(s)	813
AclI	AACGTT	1 cut(s)	171
AclWI	GGATC	2 cut(s)	762, 1554
AcoI	YGGCCR	2 cut(s)	890, 2985
AcsI	RAATTY	7 cut(s)	377, 1220, 1231, 1758, 2631, 2969, 3173
AcuI	CTGAAG	2 cut(s)	2373, 3150
AfaI	GTAC	4 cut(s)	278, 1405, 1771, 3321
AfiI	CCNNNNNNNGG	5 cut(s)	316, 481, 599, 1844, 3104
AflII	CTTAAG	1 cut(s)	575
AflIII	ACRYGT	1 cut(s)	1167
AhlI	ACTAGT	1 cut(s)	1366
AjiI	CACGTC	1 cut(s)	2071
AjnI	CCWGG	6 cut(s)	343, 439, 592, 987, 1681, 3249
AjuI	GAANNNNNNNTTGG	2 cut(s)	2174, 2206
AloI	GAACNNNNNNTCC	2 cut(s)	1431, 1463
Alw21I	GWGCWC	2 cut(s)	524, 1076
Alw26I	GTCTC	6 cut(s)	286, 460, 479, 521, 1740, 2719
Alw44I	GTGCAC	2 cut(s)	520, 1072
AlwI	GGATC	2 cut(s)	762, 1554
AlwNI	CAGNNNCTG	7 cut(s)	97, 567, 1301, 2291, 2294, 2687, 3104
AoxI	GGCC	5 cut(s)	307, 446, 890, 2985, 3358
ApaLI	GTGCAC	2 cut(s)	520, 1072
ApoI	RAATTY	7 cut(s)	377, 1220, 1231, 1758, 2631, 2969, 3173
Asp700I	GAANNNNTTC	1 cut(s)	2528
AspLEI	GCGC	4 cut(s)	353, 643, 808, 3268
AspS9I	GGNCC	3 cut(s)	714, 815, 1685
AsuC2I	CCSGG	2 cut(s)	70, 718
AsuHPI	GGTGA	9 cut(s)	464, 638, 860, 1228, 2417, 2630, 2953, 3253, 3272
AvaII	GGWCC	3 cut(s)	714, 815, 1685
AxyI	CCTNAGG	1 cut(s)	980
BaeGI	GKGCMC	5 cut(s)	524, 1076, 1504, 1950, 2708
BaeI	ACNNNNGTAYC	2 cut(s)	2934, 2967
BalI	TGGCCA	2 cut(s)	892, 2987
BanI	GGYRCC	3 cut(s)	123, 2586, 3062
BanII	GRGCYC	1 cut(s)	795
BauI	CACGAG	2 cut(s)	1113, 3216
BbsI	GAAGAC	3 cut(s)	1361, 2251, 3216
Bbv12I	GWGCWC	2 cut(s)	524, 1076
BceAI	ACGGC	1 cut(s)	137
BcgI	CGANNNNNNTGC	2 cut(s)	1700, 1734
BciT130I	CCWGG	6 cut(s)	345, 441, 594, 989, 1683, 3251
BciVI	GTATCC	1 cut(s)	2935
BclI	TGATCA	3 cut(s)	331, 2236, 2761
BcnI	CCSGG	2 cut(s)	70, 718
BcoDI	GTCTC	6 cut(s)	286, 460, 479, 521, 1740, 2719
BcuI	ACTAGT	1 cut(s)	1366
BfaI	CTAG	5 cut(s)	339, 1367, 1689, 2013, 2021
BfmI	CTRYAG	7 cut(s)	429, 1009, 1293, 1377, 1905, 1920, 2337
BfoI	RGCGCY	2 cut(s)	354, 644
BfrI	CTTAAG	1 cut(s)	575
BfuAI	ACCTGC	3 cut(s)	1877, 2585, 3394
BfuI	GTATCC	1 cut(s)	2935
BglII	AGATCT	1 cut(s)	885
Bme1390I	CCNGG	8 cut(s)	70, 345, 441, 594, 718, 989, 1683, 3251
Bme18I	GGWCC	3 cut(s)	714, 815, 1685
BmgBI	CACGTC	1 cut(s)	2071
BmgT120I	GGNCC	3 cut(s)	714, 815, 1685
BmiI	GGNNCC	7 cut(s)	106, 125, 503, 865, 986, 2588, 3064
BmrFI	CCNGG	8 cut(s)	70, 345, 441, 594, 718, 989, 1683, 3251
BmrI	ACTGGG	1 cut(s)	1086
BmuI	ACTGGG	1 cut(s)	1086
BpiI	GAAGAC	3 cut(s)	1361, 2251, 3216
BplI	GAGNNNNNCTC	4 cut(s)	266, 298, 472, 504
BpmI	CTGGAG	4 cut(s)	1665, 2109, 3107, 3334
Bpu10I	CCTNAGC	1 cut(s)	1722
BpuEI	CTTGAG	2 cut(s)	640, 1571
BpuMI	CCSGG	2 cut(s)	70, 718
Bsa29I	ATCGAT	3 cut(s)	902, 2671, 2816
BsaAI	YACGTR	1 cut(s)	1661
BsaBI	GATNNNNATC	1 cut(s)	2235
BsaI	GGTCTC	2 cut(s)	460, 2719
BsaWI	WCCGGW	2 cut(s)	1591, 2775
BsaXI	ACNNNNNCTCC	6 cut(s)	549, 579, 1387, 1417, 2373, 2403
Bsc4I	CCNNNNNNNGG	5 cut(s)	316, 481, 599, 1844, 3104
Bse1I	ACTGG	6 cut(s)	960, 1081, 1480, 1627, 1955, 2681
Bse21I	CCTNAGG	1 cut(s)	980
Bse3DI	GCAATG	5 cut(s)	513, 1282, 1905, 2230, 3298
Bse8I	GATNNNNATC	1 cut(s)	2235
BseBI	CCWGG	6 cut(s)	345, 441, 594, 989, 1683, 3251
BseCI	ATCGAT	3 cut(s)	902, 2671, 2816
BseJI	GATNNNNATC	1 cut(s)	2235
BseLI	CCNNNNNNNGG	5 cut(s)	316, 481, 599, 1844, 3104
BseMI	GCAATG	5 cut(s)	513, 1282, 1905, 2230, 3298
BseMII	CTCAG	8 cut(s)	128, 503, 1037, 2497, 2515, 2679, 2730, 3321
BseNI	ACTGG	6 cut(s)	960, 1081, 1480, 1627, 1955, 2681
BseRI	GAGGAG	5 cut(s)	25, 54, 217, 274, 287
BseSI	GKGCMC	5 cut(s)	524, 1076, 1504, 1950, 2708
BseYI	CCCAGC	1 cut(s)	2519
BsgI	GTGCAG	5 cut(s)	176, 1199, 1905, 2181, 2713
Bsh1236I	CGCG	1 cut(s)	813
BshFI	GGCC	5 cut(s)	309, 448, 892, 2987, 3360
BshNI	GGYRCC	3 cut(s)	123, 2586, 3062
BshVI	ATCGAT	3 cut(s)	902, 2671, 2816
BsiHKAI	GWGCWC	2 cut(s)	524, 1076
BsiSI	CCGG	6 cut(s)	70, 717, 1592, 1838, 2379, 2776
BslFI	GGGAC	1 cut(s)	2465
BslI	CCNNNNNNNGG	5 cut(s)	316, 481, 599, 1844, 3104
BsmAI	GTCTC	6 cut(s)	286, 460, 479, 521, 1740, 2719
BsmBI	CGTCTC	1 cut(s)	286
BsmFI	GGGAC	1 cut(s)	2465
BsnI	GGCC	5 cut(s)	309, 448, 892, 2987, 3360
Bso31I	GGTCTC	2 cut(s)	460, 2719
Bsp1286I	GDGCHC	6 cut(s)	524, 795, 1076, 1504, 1950, 2708
Bsp1407I	TGTACA	1 cut(s)	1403
Bsp19I	CCATGG	3 cut(s)	828, 893, 1615
BspANI	GGCC	5 cut(s)	309, 448, 892, 2987, 3360
BspCNI	CTCAG	8 cut(s)	127, 502, 1036, 2496, 2514, 2680, 2729, 3320
BspDI	ATCGAT	3 cut(s)	902, 2671, 2816
BspFNI	CGCG	1 cut(s)	813
BspHI	TCATGA	3 cut(s)	834, 1801, 3148
BspLI	GGNNCC	7 cut(s)	106, 125, 503, 865, 986, 2588, 3064
BspMAI	CTGCAG	6 cut(s)	433, 1013, 1297, 1381, 1909, 2341
BspMI	ACCTGC	3 cut(s)	1877, 2585, 3394
BspPI	GGATC	2 cut(s)	762, 1554
BspQI	GCTCTTC	1 cut(s)	1786
BspT107I	GGYRCC	3 cut(s)	123, 2586, 3062
BspTI	CTTAAG	1 cut(s)	575
BspTNI	GGTCTC	2 cut(s)	460, 2719
BsrBI	CCGCTC	2 cut(s)	390, 1398
BsrDI	GCAATG	5 cut(s)	513, 1282, 1905, 2230, 3298
BsrGI	TGTACA	1 cut(s)	1403
BsrI	ACTGG	6 cut(s)	960, 1081, 1480, 1627, 1955, 2681
BssNAI	GTATAC	1 cut(s)	1658
BssSI	CACGAG	2 cut(s)	1113, 3216
BssT1I	CCWWGG	6 cut(s)	304, 354, 828, 893, 1615, 2533
Bst1107I	GTATAC	1 cut(s)	1658
Bst2BI	CACGAG	2 cut(s)	1113, 3216
Bst2UI	CCWGG	6 cut(s)	345, 441, 594, 989, 1683, 3251
Bst6I	CTCTTC	5 cut(s)	1786, 1977, 3033, 3147, 3349
BstAFI	CTTAAG	1 cut(s)	575
BstAPI	GCANNNNNTGC	1 cut(s)	1904
BstAUI	TGTACA	1 cut(s)	1403
BstBAI	YACGTR	1 cut(s)	1661
BstDSI	CCRYGG	4 cut(s)	811, 828, 893, 1615
BstFNI	CGCG	1 cut(s)	813
BstH2I	RGCGCY	2 cut(s)	354, 644
BstHHI	GCGC	4 cut(s)	353, 643, 808, 3268
BstMAI	GTCTC	6 cut(s)	286, 460, 479, 521, 1740, 2719
BstMWI	GCNNNNNNNGC	7 cut(s)	141, 348, 799, 1298, 1904, 1954, 2600
BstNI	CCWGG	6 cut(s)	345, 441, 594, 989, 1683, 3251
BstNSI	RCATGY	2 cut(s)	1171, 2742
BstSCI	CCNGG	8 cut(s)	68, 343, 439, 592, 716, 987, 1681, 3249
BstSFI	CTRYAG	7 cut(s)	429, 1009, 1293, 1377, 1905, 1920, 2337
BstSLI	GKGCMC	5 cut(s)	524, 1076, 1504, 1950, 2708
BstUI	CGCG	1 cut(s)	813
BstV2I	GAAGAC	3 cut(s)	1361, 2251, 3216
BstX2I	RGATCY	2 cut(s)	885, 1546
BstXI	CCANNNNNNTGG	2 cut(s)	1622, 3085
BstYI	RGATCY	2 cut(s)	885, 1546
BstZ17I	GTATAC	1 cut(s)	1658
Bsu15I	ATCGAT	3 cut(s)	902, 2671, 2816
Bsu36I	CCTNAGG	1 cut(s)	980
BsuI	GTATCC	1 cut(s)	2935
BsuRI	GGCC	5 cut(s)	309, 448, 892, 2987, 3360
BsuTUI	ATCGAT	3 cut(s)	902, 2671, 2816
BtgI	CCRYGG	4 cut(s)	811, 828, 893, 1615
BtgZI	GCGATG	1 cut(s)	273
BtrI	CACGTC	1 cut(s)	2071
BtsI	GCAGTG	2 cut(s)	240, 438
BtsIMutI	CAGTG	9 cut(s)	240, 438, 1074, 1203, 1430, 1487, 1948, 2688, 2764
BveI	ACCTGC	3 cut(s)	1877, 2585, 3394
CaiI	CAGNNNCTG	7 cut(s)	97, 567, 1301, 2291, 2294, 2687, 3104
CciI	TCATGA	3 cut(s)	834, 1801, 3148
CfoI	GCGC	4 cut(s)	353, 643, 808, 3268
Cfr13I	GGNCC	3 cut(s)	714, 815, 1685
Cfr42I	CCGCGG	1 cut(s)	814
ClaI	ATCGAT	3 cut(s)	902, 2671, 2816
Csp6I	GTAC	4 cut(s)	277, 1404, 1770, 3320
CspCI	CAANNNNNGTGG	2 cut(s)	3182, 3217
CviQI	GTAC	4 cut(s)	277, 1404, 1770, 3320
DraI	TTTAAA	1 cut(s)	2995
EaeI	YGGCCR	2 cut(s)	890, 2985
Eam1104I	CTCTTC	5 cut(s)	1786, 1977, 3033, 3147, 3349
EarI	CTCTTC	5 cut(s)	1786, 1977, 3033, 3147, 3349
EciI	GGCGGA	1 cut(s)	411
Eco130I	CCWWGG	6 cut(s)	304, 354, 828, 893, 1615, 2533
Eco147I	AGGCCT	2 cut(s)	309, 448
Eco24I	GRGCYC	1 cut(s)	795
Eco31I	GGTCTC	2 cut(s)	460, 2719
Eco47I	GGWCC	3 cut(s)	714, 815, 1685
Eco57I	CTGAAG	2 cut(s)	2373, 3150
Eco81I	CCTNAGG	1 cut(s)	980
EcoO109I	RGGNCCY	1 cut(s)	1685
EcoRI	GAATTC	2 cut(s)	377, 2631
EcoRII	CCWGG	6 cut(s)	343, 439, 592, 987, 1681, 3249
EcoT14I	CCWWGG	6 cut(s)	304, 354, 828, 893, 1615, 2533
EcoT22I	ATGCAT	5 cut(s)	37, 317, 974, 2740, 2744
EcoT38I	GRGCYC	1 cut(s)	795
ErhI	CCWWGG	6 cut(s)	304, 354, 828, 893, 1615, 2533
Esp3I	CGTCTC	1 cut(s)	286
FaqI	GGGAC	1 cut(s)	2465
FauNDI	CATATG	1 cut(s)	942
FbaI	TGATCA	3 cut(s)	331, 2236, 2761
FblI	GTMKAC	3 cut(s)	1657, 2303, 3017
FriOI	GRGCYC	1 cut(s)	795
FspBI	CTAG	5 cut(s)	339, 1367, 1689, 2013, 2021
GlaI	GCGC	4 cut(s)	352, 642, 807, 3267
GsaI	CCCAGC	1 cut(s)	2523
GsuI	CTGGAG	4 cut(s)	1665, 2109, 3107, 3334
HaeII	RGCGCY	2 cut(s)	354, 644
HaeIII	GGCC	5 cut(s)	309, 448, 892, 2987, 3360
HapII	CCGG	6 cut(s)	70, 717, 1592, 1838, 2379, 2776
HhaI	GCGC	4 cut(s)	353, 643, 808, 3268
Hin6I	GCGC	4 cut(s)	351, 641, 806, 3266
HinP1I	GCGC	4 cut(s)	351, 641, 806, 3266
HincII	GTYRAC	3 cut(s)	1165, 2314, 3018
HindII	GTYRAC	3 cut(s)	1165, 2314, 3018
HpaII	CCGG	6 cut(s)	70, 717, 1592, 1838, 2379, 2776
HphI	GGTGA	9 cut(s)	464, 638, 860, 1228, 2417, 2630, 2953, 3253, 3272
Hpy99I	CGWCG	1 cut(s)	2075
HpyCH4IV	ACGT	5 cut(s)	171, 279, 1660, 2002, 2070
HpyF10VI	GCNNNNNNNGC	7 cut(s)	141, 348, 799, 1298, 1904, 1954, 2600
HpySE526I	ACGT	5 cut(s)	171, 279, 1660, 2002, 2070
HspAI	GCGC	4 cut(s)	351, 641, 806, 3266
Ksp22I	TGATCA	3 cut(s)	331, 2236, 2761
KspI	CCGCGG	1 cut(s)	814
LguI	GCTCTTC	1 cut(s)	1786
MaeI	CTAG	5 cut(s)	339, 1367, 1689, 2013, 2021
MaeII	ACGT	5 cut(s)	171, 279, 1660, 2002, 2070
MaeIII	GTNAC	9 cut(s)	991, 1269, 1529, 1806, 2123, 2186, 2645, 2749, 3091
MbiI	CCGCTC	2 cut(s)	390, 1398
MflI	RGATCY	2 cut(s)	885, 1546
MhlI	GDGCHC	6 cut(s)	524, 795, 1076, 1504, 1950, 2708
MlsI	TGGCCA	2 cut(s)	892, 2987
MluNI	TGGCCA	2 cut(s)	892, 2987
MlyI	GAGTC	6 cut(s)	481, 567, 1814, 2163, 2320, 2606
MmeI	TCCRAC	5 cut(s)	255, 443, 2053, 2591, 3366
Mox20I	TGGCCA	2 cut(s)	892, 2987
Mph1103I	ATGCAT	5 cut(s)	37, 317, 974, 2740, 2744
MroXI	GAANNNNTTC	1 cut(s)	2528
MscI	TGGCCA	2 cut(s)	892, 2987
MslI	CAYNNNNRTG	3 cut(s)	726, 833, 2747
Msp20I	TGGCCA	2 cut(s)	892, 2987
MspA1I	CMGCKG	4 cut(s)	813, 1267, 2291, 3104
MspCI	CTTAAG	1 cut(s)	575
MspI	CCGG	6 cut(s)	70, 717, 1592, 1838, 2379, 2776
MspR9I	CCNGG	8 cut(s)	70, 345, 441, 594, 718, 989, 1683, 3251
MvaI	CCWGG	6 cut(s)	345, 441, 594, 989, 1683, 3251
MvnI	CGCG	1 cut(s)	813
MwoI	GCNNNNNNNGC	7 cut(s)	141, 348, 799, 1298, 1904, 1954, 2600
NciI	CCSGG	2 cut(s)	70, 718
NcoI	CCATGG	3 cut(s)	828, 893, 1615
NdeI	CATATG	1 cut(s)	942
NlaIV	GGNNCC	7 cut(s)	106, 125, 503, 865, 986, 2588, 3064
NmeAIII	GCCGAG	2 cut(s)	295, 1334
NmuCI	GTSAC	7 cut(s)	1269, 1529, 1806, 2186, 2645, 2749, 3091
NsiI	ATGCAT	5 cut(s)	37, 317, 974, 2740, 2744
NspI	RCATGY	2 cut(s)	1171, 2742
PaeI	GCATGC	1 cut(s)	2742
PagI	TCATGA	3 cut(s)	834, 1801, 3148
PceI	AGGCCT	2 cut(s)	309, 448
PciI	ACATGT	1 cut(s)	1167
PciSI	GCTCTTC	1 cut(s)	1786
PcsI	WCGNNNNNNNCGW	1 cut(s)	2668
PdmI	GAANNNNTTC	1 cut(s)	2528
PfeI	GAWTC	9 cut(s)	197, 405, 571, 653, 899, 2148, 2559, 2887, 3285
PflMI	CCANNNNNTGG	1 cut(s)	3104
PfoI	TCCNGGA	1 cut(s)	1681
PleI	GAGTC	6 cut(s)	481, 566, 1813, 2162, 2320, 2606
PpsI	GAGTC	6 cut(s)	481, 566, 1813, 2162, 2320, 2606
Ppu21I	YACGTR	1 cut(s)	1661
PpuMI	RGGWCCY	1 cut(s)	1685
PscI	ACATGT	1 cut(s)	1167
Psp1406I	AACGTT	1 cut(s)	171
Psp5II	RGGWCCY	1 cut(s)	1685
Psp6I	CCWGG	6 cut(s)	343, 439, 592, 987, 1681, 3249
PspFI	CCCAGC	1 cut(s)	2519
PspGI	CCWGG	6 cut(s)	343, 439, 592, 987, 1681, 3249
PspN4I	GGNNCC	7 cut(s)	106, 125, 503, 865, 986, 2588, 3064
PspPI	GGNCC	3 cut(s)	714, 815, 1685
PspPPI	RGGWCCY	1 cut(s)	1685
PstI	CTGCAG	6 cut(s)	433, 1013, 1297, 1381, 1909, 2341
PstNI	CAGNNNCTG	7 cut(s)	97, 567, 1301, 2291, 2294, 2687, 3104
PsuI	RGATCY	2 cut(s)	885, 1546
PvuII	CAGCTG	2 cut(s)	2291, 3104
RsaI	GTAC	4 cut(s)	278, 1405, 1771, 3321
RsaNI	GTAC	4 cut(s)	277, 1404, 1770, 3320
RseI	CAYNNNNRTG	3 cut(s)	726, 833, 2747
SacII	CCGCGG	1 cut(s)	814
SalI	GTCGAC	1 cut(s)	3016
SapI	GCTCTTC	1 cut(s)	1786
Sau96I	GGNCC	3 cut(s)	714, 815, 1685
SchI	GAGTC	6 cut(s)	481, 567, 1814, 2163, 2320, 2606
ScrFI	CCNGG	8 cut(s)	70, 345, 441, 594, 718, 989, 1683, 3251
SduI	GDGCHC	6 cut(s)	524, 795, 1076, 1504, 1950, 2708
SfcI	CTRYAG	7 cut(s)	429, 1009, 1293, 1377, 1905, 1920, 2337
Sfr303I	CCGCGG	1 cut(s)	814
SgrBI	CCGCGG	1 cut(s)	814
SinI	GGWCC	3 cut(s)	714, 815, 1685
SmiMI	CAYNNNNRTG	3 cut(s)	726, 833, 2747
SmlI	CTYRAG	3 cut(s)	575, 619, 1550
SmoI	CTYRAG	3 cut(s)	575, 619, 1550
SpeI	ACTAGT	1 cut(s)	1366
SphI	GCATGC	1 cut(s)	2742
SseBI	AGGCCT	2 cut(s)	309, 448
SspMI	CTAG	5 cut(s)	339, 1367, 1689, 2013, 2021
StuI	AGGCCT	2 cut(s)	309, 448
StyD4I	CCNGG	8 cut(s)	68, 343, 439, 592, 716, 987, 1681, 3249
StyI	CCWWGG	6 cut(s)	304, 354, 828, 893, 1615, 2533
TaiI	ACGT	5 cut(s)	174, 282, 1663, 2005, 2073
TaqI	TCGA	6 cut(s)	902, 1450, 2248, 2671, 2816, 3017
TaqII	GACCGA	1 cut(s)	2256
TatI	WGTACW	1 cut(s)	1403
TauI	GCSGC	4 cut(s)	393, 396, 2106, 2223
TfiI	GAWTC	9 cut(s)	197, 405, 571, 653, 899, 2148, 2559, 2887, 3285
TscAI	CASTG	9 cut(s)	247, 438, 1081, 1203, 1430, 1487, 1955, 2688, 2764
TseFI	GTSAC	7 cut(s)	1269, 1529, 1806, 2186, 2645, 2749, 3091
Tsp45I	GTSAC	7 cut(s)	1269, 1529, 1806, 2186, 2645, 2749, 3091
TspGWI	ACGGA	3 cut(s)	3084, 3130, 3278
TspRI	CASTG	9 cut(s)	247, 438, 1081, 1203, 1430, 1487, 1955, 2688, 2764
Van91I	CCANNNNNTGG	1 cut(s)	3104
Vha464I	CTTAAG	1 cut(s)	575
VneI	GTGCAC	2 cut(s)	520, 1072
VpaK11BI	GGWCC	3 cut(s)	714, 815, 1685
XapI	RAATTY	7 cut(s)	377, 1220, 1231, 1758, 2631, 2969, 3173
XceI	RCATGY	2 cut(s)	1171, 2742
XcmI	CCANNNNNNNNNTGG	2 cut(s)	98, 682
XmiI	GTMKAC	3 cut(s)	1657, 2303, 3017
XmnI	GAANNNNTTC	1 cut(s)	2528
XspI	CTAG	5 cut(s)	339, 1367, 1689, 2013, 2021
Zsp2I	ATGCAT	5 cut(s)	37, 317, 974, 2740, 2744

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.