AT1G05960

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0003224
Physical Location & Seq
Reverse (-)
1807960 .. 1815568
7609 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G05960.2

Sequence Viewer

Length: 2949 bp
ATGGGGGTTATGTCCAGACGGGTTTTGCCCGCCTGTGGTAACCTCTGTTTCTTCTGTCCTTCTTTGAGGGCAAGGTCTAGGCATCCCGTTAAACGCTACAAGAAAATGCTCGCTGAAATCTTCCCTCGTAATCAGGAAGCTGAGCCTAATGATAGAAAAATCGGCAAGCTGTGTGAGTATGCGTCTAGGAATCCTTTACGAATTCCAAAGATTACAGAGTACCTTGAGCAAAAATGTTACAAAGAATTGCGAAATGGAAATATTGGTTCAGTGAAAGTCGTCTTATGCATTTATAAGAAACTGCTTTCATCATGTAAGGAGCAGATGCCTCTTTTTTCGTGTAGTTTGCTAAGCATTGTCAGAACTCTTTTGGAGCAAACAAAAGAGGAAGAAGTTCAGATCTTGGGTTGCAATACTCTTGTCGACTTTATAAGTTTACAGACTGTGAATTCGCACATGTTCAACTTAGAAGGTCTAATCCCTAAACTTTGTCAACTTGCTCAAGAAATGGGTGATGATGAAAGATCACTCCAATTACGGTCAGCAGGAATGCAGGCTTTGGCATTCATGGTATCTTTCATTGGTGAGCATTCCCAACTATCAATGGACTTGGATATGATTATTTCTGTGATTCTGGAGAATTATATGGATTTGGAGAAGGGCCAAGAAGATACCAAAGAAGTTGATCAAATTTCAGATACGAAGATTCCCAACATGACTAAAAAGGTTTCTTTCAAACCTAATCCGGTGACTGACTATAAGTTGGAAAACATGGATATTTCGAAGAGCCCCTCATACTGGTCTATGGTTTGCCTTTGCAATATAGCCAAATTAGCAAAGGAAACTACCACTGTTCGTCGGGTTTTGGAACCGCTTCTGACTGCTTTTGACAGTGGAGATTACTGGTCTCCTCAGAAGGGCGTTGCCTCTTCTGTTTTATTGTTTCTGCAGTCTCGTCTGGAAGAATCAGGAGAAAATTGTCATGTGTTGGTATCTTCTTTGATCAAGCACTTGGATCATAAGAATGTAATAAAGCAACAAGGTCTTCAAATTAACATGGTCAATGTAGCCACATGCCTTGCACTACATGCAAAGCAGCAGGCTTCAGGCGCGATGACTGCTGTAATAGCTGACTTGATTAAGCACTTGCGAAAATGCCTGCAAAATGCAGCTGAATCAGATGTGTCTGTTGATAAAACAAAGCAGAACTCGGACCTCCAGCATGCATTAGAAAATTGCATAGCAGAGCTCTCAAATAAGGTTGGGGATGCAGGGCCCATTCTTGATATGTTCGCAGTGGTTCTTGAGACAATTTCCACTAATGTAGTCCTTTCTAGGACCACAGCATCAGCCATTCTCCGAGCTGCACATATAGTATCGGTGGTCCCAAATGTTTCTTACCACAAGAAAGTATTTCCGGATGCCTTGTTTCACCAACTGCTCCTTGCGATGTCCCATGCAGATTGTACGACTAGAGTCGAGGCACACAATATTTTTTCCGTCGTGCTTCTTGGAACTCTTCGTTTGCCTTGGTCAGATCAACATAAGGAAACCTCAGAAGCTGTTTCTGGGTCATTGTCAGTTGATGGAATTTGTACAGTAAGGAACCAGGAGGAAGAGAAAGAAAAAGTTGAGAAATCCTTAAACAGTGAACTGTGTAAAGATGTAAACCACATATCTCGTCCAAGTGTATCAGGACAGACCAGTCAACAGCTTAGCTGTCAGTCCTTGGATAGCTTAAAGGATTTAGATGATGGTATAAAGTCGTTATGTTCACTCCGACTGAGTAGTCACCAAGTGAATATGCTTCTTTCATCCCTATGGATCCAAGCAACTTCTACCGACAATACCCCTGAAAATTTTGAGGCCATGGCCAGCACATATCAAATCACTTTACTGTTTTCACTAGCAAAGAGATCAAATCACATGGCTCTGGTGCAGTGTTTTCAGCTGGCATTCTCTCTTCGAAATCTCTCATTGAATCAAGATGGAGGTATGCAGCACTCTCGTAGAAGATCTATCTTCACTTTTGCATCATATATGCTCATTTTCGGTGCCAAGATTTCCAATATTCTGGAGCTAGTTCCAATTATCAAAGAATCTTTAACTGCCCAAATGGTTGATCCTTATCTTGTGCTGGAAGGAGATATCAGACTGCGTGCTGTATGTTCTGGATTTCCACAGGAAGAAACGTATGGATCTGACAAAGATGATAGTGCTGCTCTCAATTCTTCAGTGATTGTCACAGATGATAGACGCCTGAAGGAAATCGTGATAACTCATTTTACATCGAAATTGCAGACATTATCTGAGGAGGAGCAATTAAATTTGAGAAAGGAAATTCAGTCAGATTTTTCCCTAGATGATGCACATTCGCTTGGTGGACAATTATTCACGGATACACCAGGACCTAGTTCTCCTCTTAATCAAACAGAACTTCCAGCTTTTGAAGAGGTTGAGCTTTCAGACATAGCGGCATTTGAAGGAATATCCCCAGGGGCCAGTGGGAGTCAGTCTGGCCACAGAACATCATTGTCCACAAACACTAACCCAGTAGATGTTCTGAGTGTCAATGAGTTGTTAGAATCGGTATCAGAAACTGCTCGGCAAGTTGCAAGTCTCCCTGTTTCCTCCATTCCTGTACCTTATGACCAAATGATGAACCAGTGTGAAGCTCTTGTGACGGGTAAGCAGCAAAAGATGTCTGTGCTTCGAAGTTTCAAACCCCAAGCAACCAAAGCTATAACCTCAGAAGACAATGAAAAGGACGAACAATATCTTCTCAAGGAGACAGAAGAAGCTGGTGAAGATGATGAGAAGGCAATAATTGTGGCTGATGTTCAACCTCAAGGCCAGCTTGGATTCTTCTCACAAGAAGTTCCACAAAATTCATTTCGGTTACCGCCTTCGAGCCCCTACGATAAATTCTTGAAAGCAGCCGGGTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

982

Amino Acids

108.94

Weight (kDa)

5.54

Isoelectric Point (pI)

51.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EFR3_ARM PF21052 65 - 110 3.5e-07 EFR3, armadillo repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 294, 431
AasI GACNNNNNNGTC 2 cut(s) 1704, 1788
AccB1I GGYRCC 1 cut(s) 2054
AccI GTMKAC 1 cut(s) 423
AccII CGCG 1 cut(s) 1112
AccIII TCCGGA 1 cut(s) 1417
AciI CCGC 4 cut(s) 30, 872, 2474, 2903
AclWI GGATC 5 cut(s) 1023, 1819, 1832, 2117, 2206
AcoI YGGCCR 2 cut(s) 1872, 2518
AcsI RAATTY 9 cut(s) 201, 448, 690, 1590, 1858, 2326, 2340, 2887, 2924
AcuI CTGAAG 3 cut(s) 1089, 2217, 2282
AcyI GRCGYC 1 cut(s) 2257
AdeI CACNNNGTG 1 cut(s) 1798
AfaI GTAC 4 cut(s) 221, 1468, 1597, 2643
AfiI CCNNNNNNNGG 3 cut(s) 35, 798, 917
AflIII ACRYGT 1 cut(s) 456
AgsI TTSAA 9 cut(s) 463, 736, 1049, 1981, 2450, 2483, 2722, 2843, 2932
AjnI CCWGG 3 cut(s) 1608, 2404, 2494
Alw21I GWGCWC 1 cut(s) 1251
Alw26I GTCTC 5 cut(s) 912, 957, 1301, 2624, 2783
AlwI GGATC 5 cut(s) 1023, 1819, 1832, 2117, 2206
AlwNI CAGNNNCTG 2 cut(s) 1562, 2600
Aor13HI TCCGGA 1 cut(s) 1417
AoxI GGCC 7 cut(s) 661, 1274, 1866, 1872, 2499, 2518, 2851
ApaI GGGCCC 1 cut(s) 1278
ApeKI GCWGC 7 cut(s) 1096, 1169, 1364, 1999, 2219, 2692, 2936
ApoI RAATTY 9 cut(s) 201, 448, 690, 1590, 1858, 2326, 2340, 2887, 2924
ArsI GACNNNNNNTTYG 2 cut(s) 433, 465
Asp700I GAANNNNTTC 2 cut(s) 393, 873
AspLEI GCGC 1 cut(s) 1112
AspS9I GGNCC 8 cut(s) 661, 1213, 1274, 1275, 1338, 1384, 2408, 2499
AsuC2I CCSGG 1 cut(s) 2941
AsuHPI GGTGA 6 cut(s) 524, 596, 760, 1424, 1784, 2816
AsuII TTCGAA 3 cut(s) 782, 1966, 2713
AvaII GGWCC 4 cut(s) 1213, 1338, 1384, 2408
BaeGI GKGCMC 1 cut(s) 1278
BalI TGGCCA 2 cut(s) 1874, 2520
BamHI GGATCC 1 cut(s) 1824
BanI GGYRCC 1 cut(s) 2054
BanII GRGCYC 4 cut(s) 791, 1251, 1278, 2915
BbsI GAAGAC 2 cut(s) 1037, 2760
Bbv12I GWGCWC 1 cut(s) 1251
BbvI GCAGC 6 cut(s) 1108, 1181, 1351, 2011, 2206, 2704
BccI CCATC 3 cut(s) 1580, 1748, 1982
BcgI CGANNNNNNTGC 2 cut(s) 1988, 2022
BciT130I CCWGG 3 cut(s) 1610, 2406, 2496
BciVI GTATCC 1 cut(s) 2392
BclI TGATCA 2 cut(s) 685, 1002
BcnI CCSGG 1 cut(s) 2941
BcoDI GTCTC 5 cut(s) 912, 957, 1301, 2624, 2783
BfaI CTAG 8 cut(s) 78, 186, 1335, 1473, 1907, 2081, 2360, 2412
BfmI CTRYAG 1 cut(s) 947
BfuI GTATCC 1 cut(s) 2392
BglII AGATCT 2 cut(s) 399, 2015
BisI GCNGC 8 cut(s) 1097, 1170, 1365, 2000, 2220, 2475, 2693, 2937
BlpI GCTNAGC 3 cut(s) 141, 350, 1715
BlsI GCNGC 8 cut(s) 1098, 1171, 1366, 2001, 2221, 2476, 2694, 2938
Bme1390I CCNGG 4 cut(s) 1610, 2406, 2496, 2941
Bme18I GGWCC 4 cut(s) 1213, 1338, 1384, 2408
BmgT120I GGNCC 8 cut(s) 661, 1213, 1274, 1275, 1338, 1384, 2408, 2499
BmiI GGNNCC 7 cut(s) 870, 1276, 1386, 1607, 1826, 2056, 2500
BmrFI CCNGG 4 cut(s) 1610, 2406, 2496, 2941
BmrI ACTGGG 1 cut(s) 2546
BmsI GCATC 7 cut(s) 91, 315, 1258, 1355, 1411, 2042, 2356
BmuI ACTGGG 1 cut(s) 2546
BoxI GACNNNNGTC 1 cut(s) 1475
BpiI GAAGAC 2 cut(s) 1037, 2760
BpmI CTGGAG 3 cut(s) 656, 1202, 2096
Bpu1102I GCTNAGC 3 cut(s) 141, 350, 1715
Bpu14I TTCGAA 3 cut(s) 782, 1966, 2713
BpuEI CTTGAG 5 cut(s) 245, 486, 1325, 2768, 2832
BpuMI CCSGG 1 cut(s) 2941
BsaBI GATNNNNATC 1 cut(s) 2127
BsaHI GRCGYC 1 cut(s) 2257
BsaI GGTCTC 1 cut(s) 912
BsaJI CCNNGG 5 cut(s) 1529, 1728, 1869, 2494, 2495
BsaWI WCCGGW 2 cut(s) 745, 1417
Bsc4I CCNNNNNNNGG 3 cut(s) 35, 798, 917
Bse1I ACTGG 6 cut(s) 803, 908, 1704, 2502, 2552, 2665
Bse8I GATNNNNATC 1 cut(s) 2127
BseAI TCCGGA 1 cut(s) 1417
BseBI CCWGG 3 cut(s) 1610, 2406, 2496
BseDI CCNNGG 5 cut(s) 1529, 1728, 1869, 2494, 2495
BseGI GGATG 4 cut(s) 82, 1273, 1426, 1814
BseJI GATNNNNATC 1 cut(s) 2127
BseLI CCNNNNNNNGG 3 cut(s) 35, 798, 917
BseMII CTCAG 7 cut(s) 132, 926, 1569, 1775, 2301, 2555, 2763
BseNI ACTGG 6 cut(s) 803, 908, 1704, 2502, 2552, 2665
BseRI GAGGAG 4 cut(s) 900, 2327, 2330, 2409
BseSI GKGCMC 1 cut(s) 1278
BseXI GCAGC 6 cut(s) 1108, 1181, 1351, 2011, 2206, 2704
BsgI GTGCAG 2 cut(s) 1350, 1958
Bsh1236I CGCG 1 cut(s) 1112
BshFI GGCC 7 cut(s) 663, 1276, 1868, 1874, 2501, 2520, 2853
BshNI GGYRCC 1 cut(s) 2054
BsiHKAI GWGCWC 1 cut(s) 1251
BsiSI CCGG 3 cut(s) 746, 1418, 2940
BslFI GGGAC 2 cut(s) 1370, 1438
BslI CCNNNNNNNGG 3 cut(s) 35, 798, 917
BsmAI GTCTC 5 cut(s) 912, 957, 1301, 2624, 2783
BsmFI GGGAC 2 cut(s) 1370, 1438
BsmI GAATGC 4 cut(s) 555, 563, 589, 1955
BsnI GGCC 7 cut(s) 663, 1276, 1868, 1874, 2501, 2520, 2853
Bso31I GGTCTC 1 cut(s) 912
Bsp119I TTCGAA 3 cut(s) 782, 1966, 2713
Bsp120I GGGCCC 1 cut(s) 1274
Bsp1286I GDGCHC 4 cut(s) 791, 1251, 1278, 2915
Bsp13I TCCGGA 1 cut(s) 1417
Bsp1407I TGTACA 1 cut(s) 1595
Bsp1720I GCTNAGC 3 cut(s) 141, 350, 1715
Bsp19I CCATGG 1 cut(s) 1869
BspACI CCGC 4 cut(s) 30, 872, 2474, 2903
BspANI GGCC 7 cut(s) 663, 1276, 1868, 1874, 2501, 2520, 2853
BspCNI CTCAG 7 cut(s) 133, 925, 1568, 1776, 2302, 2556, 2762
BspEI TCCGGA 1 cut(s) 1417
BspFNI CGCG 1 cut(s) 1112
BspLI GGNNCC 7 cut(s) 870, 1276, 1386, 1607, 1826, 2056, 2500
BspMAI CTGCAG 1 cut(s) 951
BspPI GGATC 5 cut(s) 1023, 1819, 1832, 2117, 2206
BspQI GCTCTTC 1 cut(s) 779
BspT104I TTCGAA 3 cut(s) 782, 1966, 2713
BspT107I GGYRCC 1 cut(s) 2054
BspTNI GGTCTC 1 cut(s) 912
BsrGI TGTACA 1 cut(s) 1595
BsrI ACTGG 6 cut(s) 803, 908, 1704, 2502, 2552, 2665
BssECI CCNNGG 5 cut(s) 1529, 1728, 1869, 2494, 2495
BssNI GRCGYC 1 cut(s) 2257
BssT1I CCWWGG 3 cut(s) 1529, 1728, 1869
Bst2UI CCWGG 3 cut(s) 1610, 2406, 2496
Bst4CI ACNGT 8 cut(s) 445, 540, 853, 893, 1600, 1649, 1656, 1899
Bst6I CTCTTC 6 cut(s) 779, 934, 1524, 1611, 1968, 2445
BstACI GRCGYC 1 cut(s) 2257
BstAPI GCANNNNNTGC 1 cut(s) 1088
BstAUI TGTACA 1 cut(s) 1595
BstBI TTCGAA 3 cut(s) 782, 1966, 2713
BstDSI CCRYGG 1 cut(s) 1869
BstEII GGTNACC 2 cut(s) 38, 2898
BstF5I GGATG 4 cut(s) 82, 1273, 1426, 1814
BstFNI CGCG 1 cut(s) 1112
BstHHI GCGC 1 cut(s) 1112
BstMAI GTCTC 5 cut(s) 912, 957, 1301, 2624, 2783
BstMWI GCNNNNNNNGC 6 cut(s) 833, 1088, 1109, 1118, 1127, 2738
BstNI CCWGG 3 cut(s) 1610, 2406, 2496
BstNSI RCATGY 4 cut(s) 460, 1077, 1091, 1226
BstPAI GACNNNNGTC 1 cut(s) 1475
BstPI GGTNACC 2 cut(s) 38, 2898
BstSCI CCNGG 4 cut(s) 1608, 2404, 2494, 2939
BstSFI CTRYAG 1 cut(s) 947
BstSLI GKGCMC 1 cut(s) 1278
BstUI CGCG 1 cut(s) 1112
BstV1I GCAGC 6 cut(s) 1108, 1181, 1351, 2011, 2206, 2704
BstV2I GAAGAC 2 cut(s) 1037, 2760
BstX2I RGATCY 4 cut(s) 399, 1824, 2015, 2198
BstXI CCANNNNNNTGG 1 cut(s) 2074
BstYI RGATCY 4 cut(s) 399, 1824, 2015, 2198
BsuI GTATCC 1 cut(s) 2392
BsuRI GGCC 7 cut(s) 663, 1276, 1868, 1874, 2501, 2520, 2853
BtgI CCRYGG 1 cut(s) 1869
BtgZI GCGATG 2 cut(s) 1127, 1463
BtsCI GGATG 4 cut(s) 82, 1273, 1426, 1814
BtsI GCAGTG 2 cut(s) 1302, 1946
BtsIMutI CAGTG 9 cut(s) 276, 849, 898, 1302, 1654, 1946, 2241, 2509, 2672
CaiI CAGNNNCTG 2 cut(s) 1562, 2600
CfoI GCGC 1 cut(s) 1112
Cfr13I GGNCC 8 cut(s) 661, 1213, 1274, 1275, 1338, 1384, 2408, 2499
CseI GACGC 2 cut(s) 171, 2265
Csp6I GTAC 4 cut(s) 220, 1467, 1596, 2642
CspCI CAANNNNNGTGG 4 cut(s) 1060, 1095, 2811, 2846
CviQI GTAC 4 cut(s) 220, 1467, 1596, 2642
DraIII CACNNNGTG 1 cut(s) 1798
DrdI GACNNNNNNGTC 2 cut(s) 1704, 1788
DseDI GACNNNNNNGTC 2 cut(s) 1704, 1788
EaeI YGGCCR 2 cut(s) 1872, 2518
Eam1104I CTCTTC 6 cut(s) 779, 934, 1524, 1611, 1968, 2445
EarI CTCTTC 6 cut(s) 779, 934, 1524, 1611, 1968, 2445
Ecl136II GAGCTC 1 cut(s) 1249
Eco130I CCWWGG 3 cut(s) 1529, 1728, 1869
Eco24I GRGCYC 4 cut(s) 791, 1251, 1278, 2915
Eco31I GGTCTC 1 cut(s) 912
Eco32I GATATC 1 cut(s) 2149
Eco47I GGWCC 4 cut(s) 1213, 1338, 1384, 2408
Eco53kI GAGCTC 1 cut(s) 1249
Eco57I CTGAAG 3 cut(s) 1089, 2217, 2282
Eco91I GGTNACC 2 cut(s) 38, 2898
EcoICRI GAGCTC 1 cut(s) 1249
EcoO109I RGGNCCY 2 cut(s) 1274, 2408
EcoO65I GGTNACC 2 cut(s) 38, 2898
EcoRI GAATTC 2 cut(s) 201, 448
EcoRII CCWGG 3 cut(s) 1608, 2404, 2494
EcoRV GATATC 1 cut(s) 2149
EcoT14I CCWWGG 3 cut(s) 1529, 1728, 1869
EcoT22I ATGCAT 2 cut(s) 290, 1228
EcoT38I GRGCYC 4 cut(s) 791, 1251, 1278, 2915
ErhI CCWWGG 3 cut(s) 1529, 1728, 1869
FalI AAGNNNNNCTT 2 cut(s) 2841, 2873
FaqI GGGAC 2 cut(s) 1370, 1438
FauI CCCGC 1 cut(s) 37
FbaI TGATCA 2 cut(s) 685, 1002
FblI GTMKAC 1 cut(s) 423
Fnu4HI GCNGC 8 cut(s) 1097, 1170, 1365, 2000, 2220, 2475, 2693, 2937
FokI GGATG 4 cut(s) 69, 1280, 1433, 1801
FriOI GRGCYC 4 cut(s) 791, 1251, 1278, 2915
Fsp4HI GCNGC 8 cut(s) 1097, 1170, 1365, 2000, 2220, 2475, 2693, 2937
FspBI CTAG 8 cut(s) 78, 186, 1335, 1473, 1907, 2081, 2360, 2412
GlaI GCGC 1 cut(s) 1111
GluI GCNGC 8 cut(s) 1097, 1170, 1365, 2000, 2220, 2475, 2693, 2937
GsuI CTGGAG 3 cut(s) 656, 1202, 2096
HaeIII GGCC 7 cut(s) 663, 1276, 1868, 1874, 2501, 2520, 2853
HapII CCGG 3 cut(s) 746, 1418, 2940
HgaI GACGC 2 cut(s) 171, 2265
HhaI GCGC 1 cut(s) 1112
Hin1I GRCGYC 1 cut(s) 2257
Hin6I GCGC 1 cut(s) 1110
HinP1I GCGC 1 cut(s) 1110
HincII GTYRAC 3 cut(s) 424, 494, 1709
HindII GTYRAC 3 cut(s) 424, 494, 1709
HpaII CCGG 3 cut(s) 746, 1418, 2940
HphI GGTGA 6 cut(s) 524, 596, 760, 1424, 1784, 2816
Hpy166II GTNNAC 9 cut(s) 424, 437, 494, 1652, 1669, 1709, 1775, 2384, 2538
Hpy8I GTNNAC 9 cut(s) 424, 437, 494, 1652, 1669, 1709, 1775, 2384, 2538
Hpy99I CGWCG 2 cut(s) 861, 1505
HpyAV CCTTC 9 cut(s) 69, 464, 652, 910, 2135, 2257, 2477, 2812, 2916
HpyCH4III ACNGT 8 cut(s) 445, 540, 853, 893, 1600, 1649, 1656, 1899
HpyCH4IV ACGT 1 cut(s) 2192
HpyF10VI GCNNNNNNNGC 6 cut(s) 833, 1088, 1109, 1118, 1127, 2738
HpySE526I ACGT 1 cut(s) 2192
Hsp92I GRCGYC 1 cut(s) 2257
HspAI GCGC 1 cut(s) 1110
Kpn2I TCCGGA 1 cut(s) 1417
Ksp22I TGATCA 2 cut(s) 685, 1002
LguI GCTCTTC 1 cut(s) 779
LmnI GCTCC 5 cut(s) 319, 373, 1446, 2077, 2317
Lsp1109I GCAGC 6 cut(s) 1108, 1181, 1351, 2011, 2206, 2704
LweI GCATC 7 cut(s) 91, 315, 1258, 1355, 1411, 2042, 2356
MaeI CTAG 8 cut(s) 78, 186, 1335, 1473, 1907, 2081, 2360, 2412
MaeII ACGT 1 cut(s) 2192
MaeIII GTNAC 7 cut(s) 38, 236, 748, 1790, 2242, 2680, 2898
MflI RGATCY 4 cut(s) 399, 1824, 2015, 2198
MhlI GDGCHC 4 cut(s) 791, 1251, 1278, 2915
MlsI TGGCCA 2 cut(s) 1874, 2520
MluNI TGGCCA 2 cut(s) 1874, 2520
MlyI GAGTC 2 cut(s) 1485, 2518
MmeI TCCRAC 2 cut(s) 744, 1804
Mox20I TGGCCA 2 cut(s) 1874, 2520
Mph1103I ATGCAT 2 cut(s) 290, 1228
MroI TCCGGA 1 cut(s) 1417
MroXI GAANNNNTTC 2 cut(s) 393, 873
MscI TGGCCA 2 cut(s) 1874, 2520
MseI TTAA 9 cut(s) 90, 1053, 1140, 1643, 1739, 2105, 2324, 2424, 2947
MslI CAYNNNNRTG 2 cut(s) 1023, 1819
Msp20I TGGCCA 2 cut(s) 1874, 2520
MspA1I CMGCKG 2 cut(s) 1172, 1951
MspI CCGG 3 cut(s) 746, 1418, 2940
MspR9I CCNGG 4 cut(s) 1610, 2406, 2496, 2941
Mva1269I GAATGC 4 cut(s) 555, 563, 589, 1955
MvaI CCWGG 3 cut(s) 1610, 2406, 2496
MvnI CGCG 1 cut(s) 1112
MwoI GCNNNNNNNGC 6 cut(s) 833, 1088, 1109, 1118, 1127, 2738
NciI CCSGG 1 cut(s) 2941
NcoI CCATGG 1 cut(s) 1869
NlaIV GGNNCC 7 cut(s) 870, 1276, 1386, 1607, 1826, 2056, 2500
NmeAIII GCCGAG 1 cut(s) 2584
NmuCI GTSAC 4 cut(s) 748, 1790, 2242, 2680
NsiI ATGCAT 2 cut(s) 290, 1228
NspI RCATGY 4 cut(s) 460, 1077, 1091, 1226
NspV TTCGAA 3 cut(s) 782, 1966, 2713
PaeI GCATGC 1 cut(s) 1226
PasI CCCWGGG 1 cut(s) 2495
PciI ACATGT 1 cut(s) 456
PciSI GCTCTTC 1 cut(s) 779
PctI GAATGC 4 cut(s) 555, 563, 589, 1955
PdmI GAANNNNTTC 2 cut(s) 393, 873
PfeI GAWTC 9 cut(s) 190, 631, 706, 965, 1175, 1981, 2099, 2585, 2862
PkrI GCNGC 8 cut(s) 1098, 1171, 1366, 2001, 2221, 2476, 2694, 2938
PleI GAGTC 2 cut(s) 1484, 2517
PpsI GAGTC 2 cut(s) 1484, 2517
PpuMI RGGWCCY 1 cut(s) 2408
PscI ACATGT 1 cut(s) 456
PshAI GACNNNNGTC 1 cut(s) 1475
PsiI TTATAA 2 cut(s) 294, 431
Psp124BI GAGCTC 1 cut(s) 1251
Psp5II RGGWCCY 1 cut(s) 2408
Psp6I CCWGG 3 cut(s) 1608, 2404, 2494
PspEI GGTNACC 2 cut(s) 38, 2898
PspGI CCWGG 3 cut(s) 1608, 2404, 2494
PspN4I GGNNCC 7 cut(s) 870, 1276, 1386, 1607, 1826, 2056, 2500
PspOMI GGGCCC 1 cut(s) 1274
PspPI GGNCC 8 cut(s) 661, 1213, 1274, 1275, 1338, 1384, 2408, 2499
PspPPI RGGWCCY 1 cut(s) 2408
PstI CTGCAG 1 cut(s) 951
PstNI CAGNNNCTG 2 cut(s) 1562, 2600
PsuI RGATCY 4 cut(s) 399, 1824, 2015, 2198
PvuII CAGCTG 2 cut(s) 1172, 1951
RsaI GTAC 4 cut(s) 221, 1468, 1597, 2643
RsaNI GTAC 4 cut(s) 220, 1467, 1596, 2642
RseI CAYNNNNRTG 2 cut(s) 1023, 1819
SacI GAGCTC 1 cut(s) 1251
SalI GTCGAC 1 cut(s) 422
SapI GCTCTTC 1 cut(s) 779
SaqAI TTAA 9 cut(s) 90, 1053, 1140, 1643, 1739, 2105, 2324, 2424, 2947
SatI GCNGC 8 cut(s) 1097, 1170, 1365, 2000, 2220, 2475, 2693, 2937
Sau96I GGNCC 8 cut(s) 661, 1213, 1274, 1275, 1338, 1384, 2408, 2499
SchI GAGTC 2 cut(s) 1485, 2518
ScrFI CCNGG 4 cut(s) 1610, 2406, 2496, 2941
SduI GDGCHC 4 cut(s) 791, 1251, 1278, 2915
SfaNI GCATC 7 cut(s) 91, 315, 1258, 1355, 1411, 2042, 2356
SfcI CTRYAG 1 cut(s) 947
SfuI TTCGAA 3 cut(s) 782, 1966, 2713
SinI GGWCC 4 cut(s) 1213, 1338, 1384, 2408
SmiMI CAYNNNNRTG 2 cut(s) 1023, 1819
SmlI CTYRAG 5 cut(s) 224, 501, 1304, 2783, 2847
SmoI CTYRAG 5 cut(s) 224, 501, 1304, 2783, 2847
SphI GCATGC 1 cut(s) 1226
SsiI CCGC 4 cut(s) 30, 872, 2474, 2903
SspI AATATT 3 cut(s) 262, 1492, 2071
SspMI CTAG 8 cut(s) 78, 186, 1335, 1473, 1907, 2081, 2360, 2412
SstI GAGCTC 1 cut(s) 1251
StyD4I CCNGG 4 cut(s) 1608, 2404, 2494, 2939
StyI CCWWGG 3 cut(s) 1529, 1728, 1869
TaaI ACNGT 8 cut(s) 445, 540, 853, 893, 1600, 1649, 1656, 1899
TaiI ACGT 1 cut(s) 2195
TaqI TCGA 7 cut(s) 423, 782, 1479, 1966, 2291, 2713, 2909
TatI WGTACW 1 cut(s) 1595
TauI GCSGC 1 cut(s) 2477
TfiI GAWTC 9 cut(s) 190, 631, 706, 965, 1175, 1981, 2099, 2585, 2862
Tru1I TTAA 9 cut(s) 90, 1053, 1140, 1643, 1739, 2105, 2324, 2424, 2947
Tru9I TTAA 9 cut(s) 90, 1053, 1140, 1643, 1739, 2105, 2324, 2424, 2947
TscAI CASTG 9 cut(s) 276, 856, 898, 1302, 1654, 1946, 2241, 2509, 2672
TseFI GTSAC 4 cut(s) 748, 1790, 2242, 2680
TseI GCWGC 7 cut(s) 1096, 1169, 1364, 1999, 2219, 2692, 2936
Tsp45I GTSAC 4 cut(s) 748, 1790, 2242, 2680
TspDTI ATGAA 8 cut(s) 297, 534, 556, 568, 1803, 2675, 2775, 2880
TspGWI ACGGA 2 cut(s) 1489, 2411
TspRI CASTG 9 cut(s) 276, 856, 898, 1302, 1654, 1946, 2241, 2509, 2672
VpaK11BI GGWCC 4 cut(s) 1213, 1338, 1384, 2408
XapI RAATTY 9 cut(s) 201, 448, 690, 1590, 1858, 2326, 2340, 2887, 2924
XceI RCATGY 4 cut(s) 460, 1077, 1091, 1226
XmiI GTMKAC 1 cut(s) 423
XmnI GAANNNNTTC 2 cut(s) 393, 873
XspI CTAG 8 cut(s) 78, 186, 1335, 1473, 1907, 2081, 2360, 2412
Zsp2I ATGCAT 2 cut(s) 290, 1228
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.