Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0003224

Physical Location & Seq

Genomic Coordinates Reverse (-)

17772504 .. 17787749

Gene Structure 15246 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G192000.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2994 bp

ATGGGGGTTATGTCGAGGCGGATTGTGCCCGCCTGCGGGAACCTCTGCTTCTTCTGTCCTTCAATGCGTGCAAGGTCAAGACAGCCCGTGAAACGCTACAAGAAGTTGCTCACTGATATCTTCCCTCGTAATCAGGATGCTGAACCAAATGACAGGAAAATTGGGAAACTTTGTGAATATGCTTTGAAGAACCCACTGCGAATTCCCAAGATCACTGATAGCCTAGAGCAAAGATGTTACAAGGATTTGCGAAATGAGCACTTCGGGTCTGTTAAAGTGGTGCTATGCATTTATAGGAAGTTGCTATCATCATGTAAGGAGCAAATGCCACTATTTGCCAGTAGTTTACTAGGAATTGTTCGGATTCTTTTGGAACAAAATCGACATGATGAAATGCGGATTCTAGGTTGTAATACTCTCGTTGACTTTATAAATAGCCAGATTGATAGTACACATATGTTCAGCCTAGAGGGCCTTATTCCTAAACTTTGTCAAATGGCTCAAGAAGTGGGAGATAATGAAAGAGCTCTACGTCTTCGTTCAGCCGGACTGCAATCTCTGGCTTTTATGGTGTGGTTCATGGGTGAGCACTCTCATATTTCAATGGACTTTGACACTATCATATCAGTGACTTTGGATAACTACGCGGATATCCATACTAAACCTGGGAGTGCGACGGAAGACAGACAATATTCTGTGTCTCAGGACCAGTGGGTTCAAGGAGTGCTTAAAGCAGAAGTTCATGATTCATCTTTTCCAGTTATTAGTCAGAAGGTTCCTTCACTTCCAAACCTGAAAAACGCTGATTTGGATCCCACAATCGATGCCAACAAGAGTCCCTCTTACTGGTCTAGGGTTTGCTTGCGTAATATAGCCAGATTGGCGAAGGAAGCTACAACAGTGCGTCGAGTGCTTGAACCGCTTTTTCAAAGTTTTGATGCTGAGAACCATTGGTCCCCAGATAAACCACTTGCCTATCATGTTTTGATGTATCTGCAGTCACTTTTGGAGGAATCAGGAGATAATTCCCATTTGTTATTACATATATTGGTCAAGCATTTGGATCACAAGAATGTTGTCAAACAACCTCGCCTACAAGCTGATATTGTTAATGTCACCACACAAATAGCACAAGGTGCTAAGCAGCAGGCATCAGTTGCGATTACTGGTGCAATATCCGACCTGATAAAACATTTACGAAAATGCCTGCAAAATCAAGCTGAGGTATCGAGCCCTGGGAGTACAGATAAATGGAACCCAGATCTTCTGTCGGCACTAGAAAGATGTATCTCACAGCTATCAAATAAGGTTGGAGATGTGGGACCCATACTTGATAAGATGGCTGTGGTGCTAGAGAATATTCCTACTAATACAGTTGTAGCTAGGACGACAATCTCTGCTGTTTATCTAACTGCAAAGATGATATCTTCTGTTCCTAATGTATCATATCACAAGAAGGCTTTTCCTGATGCTCTATTTCACCAATTACTCCTAGCAATGGGCCACCCAGACCATGAAACACGAGTTGGAGCACACAGCATTTTCTCTATGGTGCTTATGCCATCTCTGGTTGCTCCTTGGTTAGAGCAGAAAATGAACCCTTTGCAAGCTGTTTCAGCATCTGTTTCTACATTGCAGAAGGTAAAGGATGGAAGTTTCTCTATTCAGGATGAAGGGAAAGACACAGGAGTACCGTTGAATGGAGAACTGGAGAAAGAGGGATGTGAATTATCAGATGTCTATGAGAAACAATTTGGTCAATCTTACAGCTTCAAGAGTGGTTTGACTTGTGGAAGAACAGAACTAACTTCCCTTCGGTTAAGTAGTCACCAAGTGAGTCTTCTGCTTTCATCGATTTGGGTTCAGGCAACATCTGCAACGAATACTCCTGAAAATTTTGAGGCAATGGCCCACACTTATAATGTTGCTTTACTGTTCACACGATCAAAGGCCTCCAGTCACATGGCTTTAGCAAGATGTTTTCAGCTGGCATTCTCCATTAGGGCTATTTCGTTGGATCTAGATGGAGGTTTGCATCCATCTCGTAGAAGGTCTCTCTTTACCTTGGCATCGTACATGCTTGTATTTTCAGCCCGGGCTGGTGACCTCCCAGAGCTTATTCCCATTTTTAAAGCATCTTTGGAAGATAAAATGGTTGATCCCTGTCTTCAGTTGGTCGACAATGCCTGGCTGCAGGCAGTTTCTATTGAGTCTTATAAGGAGAAGATATCATCCGGATCGTTGCAGGAGGATGAAGTTGCTACATTTAATTCTCTGTCAGCAGTTGAATTAGATGACCAACTATTAAAAGAAACCGTGATATCCCACTTCATGACTAAATTTGCAAAATTGTCAGAGGATGAATTATCTAGCATCAAGAAGGAACTCTTACAGGGATTTTCACCTGATGATGCATTTCCATTAGGAGCTCCACTATTTATGGAGACACCACGACCATGTTCTCCTCTTGCCCAGATAGACTTCCCTGATTTTGATGAGGTGATGCCTCCAGGTTCCTTGACAGACGATGAAGCCTTCCCTGAACCAAGTGGAAGCCAGTCAGACCGCAAAACATCACTCTCCATCAATACACTTGACATTCTAAGTGTTAATCAGCTCCTGGATTCAGTCCTCGAAACAGCCCGACAAGTTGCAAGCTTCCCAGTTTCCACAACACCCATACCTTATGACCAAATGAAGAGCCAGTGTGAAGCCCTTGTAACCGGTAAACAGCAAAAGATGGCAGTTCTTCATAATTTCAAGCATCAAGTGGATGCCAAGGCGATAGTCCTCTCCAGTGAATTTGATAACACATGTCCCACTTTACCAACCACGGCAATAGAACTTTCAGAAGGTGATCTAAAGTTGAAAAACAAGGAGCAAGTTCGAGTACAGAATCAACTTATCCTCTGCTCACGTGAGATTGGGCAGCATTCTTTCAAATTACCACCTTCAAGCCCTTATGACAAATTCTTGAAAGCTGCTGGATGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

998

Amino Acids

110.88

Weight (kDa)

6.22

Isoelectric Point (pI)

45.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003224)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05960 AT1G05960 AT1G05960 AT1G05960
fragaria_vesca	FvH4_4g10730 FvH4_4g10730 FvH4_4g10730 FvH4_4g10730 FvH4_4g10730 FvH4_4g10730 FvH4_4g10730 FvH4_4g10730 FvH4_4g10730 FvH4_4g10730 FvH4_4g10730 FvH4_4g10730
malus_domestica	MD04G1007900.v1.1
prunus_persica	Prupe.1G192000_v2.0.a1 Prupe.1G192000_v2.0.a1 Prupe.1G192000_v2.0.a1 Prupe.1G192000_v2.0.a1 Prupe.1G192000_v2.0.a1
pyrus_communis	pycom04g03470
rosa_chinensis	RchiOBHm_Chr4g0406851
rosa_laevigata	RLG00000008750
rosa_multiflora	Rmu_sc0008087.1_g000006
rosa_roxburghii	Rroxscaffold_5G00351630
rosa_rugosa	Rorug04G0074600 Rorug04G0074700 Rorug04G0074800 Rorug04G0074900 Rorug04G0075000 Rorug04G0075100
rosa_samantha	Rh4AG141400 Rh4CG148100 Rh4DG135200
rosa_wichuraiana	Rw4G011510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	431, 1920, 2217
AccI	GTMKAC	1 cut(s)	2178
AccII	CGCG	1 cut(s)	647
AccIII	TCCGGA	1 cut(s)	2234
AciI	CCGC	7 cut(s)	19, 30, 36, 397, 647, 920, 2566
AclWI	GGATC	6 cut(s)	806, 819, 1071, 2025, 2153, 2245
AcsI	RAATTY	5 cut(s)	201, 1894, 2339, 2801, 2969
AcuI	CTGAAG	1 cut(s)	2153
AcvI	CACGTG	1 cut(s)	2918
AdeI	CACNNNGTG	2 cut(s)	1136, 1834
AfaI	GTAC	5 cut(s)	451, 1243, 1692, 2075, 2892
AfiI	CCNNNNNNNGG	5 cut(s)	35, 36, 846, 1498, 1700
AflIII	ACRYGT	1 cut(s)	2813
AgeI	ACCGGT	1 cut(s)	2723
AjnI	CCWGG	5 cut(s)	664, 1234, 2186, 2509, 2619
AjuI	GAANNNNNNNTTGG	4 cut(s)	1509, 1541, 1824, 1856
AloI	GAACNNNNNNTCC	2 cut(s)	938, 970
Alw21I	GWGCWC	5 cut(s)	261, 529, 591, 1534, 2431
Alw26I	GTCTC	3 cut(s)	705, 2058, 2438
AlwI	GGATC	6 cut(s)	806, 819, 1071, 2025, 2153, 2245
AlwNI	CAGNNNCTG	2 cut(s)	1622, 2620
Ama87I	CYCGRG	1 cut(s)	2094
Aor13HI	TCCGGA	1 cut(s)	2234
AoxI	GGCC	4 cut(s)	472, 1501, 1908, 1950
ApeKI	GCWGC	4 cut(s)	1144, 2191, 2929, 2981
ApoI	RAATTY	5 cut(s)	201, 1894, 2339, 2801, 2969
AsiGI	ACCGGT	1 cut(s)	2723
AspS9I	GGNCC	6 cut(s)	472, 706, 954, 1322, 1501, 1909
AsuC2I	CCSGG	2 cut(s)	2095, 2096
AsuHPI	GGTGA	8 cut(s)	596, 1108, 1472, 1820, 2114, 2394, 2512, 2867
AvaI	CYCGRG	1 cut(s)	2094
AvaII	GGWCC	3 cut(s)	706, 954, 1322
BaeGI	GKGCMC	1 cut(s)	30
BaeI	ACNNNNGTAYC	2 cut(s)	1674, 1707
BamHI	GGATCC	1 cut(s)	811
BanII	GRGCYC	3 cut(s)	529, 1235, 2431
BauI	CACGAG	1 cut(s)	1521
BbrPI	CACGTG	1 cut(s)	2918
BbsI	GAAGAC	4 cut(s)	527, 687, 1832, 2159
Bbv12I	GWGCWC	5 cut(s)	261, 529, 591, 1534, 2431
BbvCI	CCTCAGC	1 cut(s)	1221
BbvI	GCAGC	4 cut(s)	1156, 2178, 2941, 2968
BccI	CCATC	7 cut(s)	1333, 1570, 1643, 2018, 2047, 2591, 2734
BceAI	ACGGC	1 cut(s)	2850
BcgI	CGANNNNNNTGC	2 cut(s)	2024, 2058
BciT130I	CCWGG	5 cut(s)	666, 1236, 2188, 2511, 2621
BcnI	CCSGG	2 cut(s)	2095, 2096
BcoDI	GTCTC	3 cut(s)	705, 2058, 2438
BfmI	CTRYAG	2 cut(s)	995, 2192
BglI	GCCNNNNNGGC	2 cut(s)	471, 881
BglII	AGATCT	1 cut(s)	1261
BisI	GCNGC	4 cut(s)	1145, 2192, 2930, 2982
BlpI	GCTNAGC	1 cut(s)	1140
BlsI	GCNGC	4 cut(s)	1146, 2193, 2931, 2983
Bme1390I	CCNGG	7 cut(s)	666, 1236, 2095, 2096, 2188, 2511, 2621
Bme18I	GGWCC	3 cut(s)	706, 954, 1322
BmeT110I	CYCGRG	1 cut(s)	2094
BmgT120I	GGNCC	6 cut(s)	472, 706, 954, 1322, 1501, 1909
BmiI	GGNNCC	8 cut(s)	41, 777, 813, 956, 1256, 1323, 1324, 2515
BmrFI	CCNGG	7 cut(s)	666, 1236, 2095, 2096, 2188, 2511, 2621
BmrI	ACTGGG	1 cut(s)	2657
BmuI	ACTGGG	1 cut(s)	2657
BpiI	GAAGAC	4 cut(s)	527, 687, 1832, 2159
BpmI	CTGGAG	4 cut(s)	1730, 1939, 2493, 2779
Bpu10I	CCTNAGC	1 cut(s)	1221
Bpu1102I	GCTNAGC	1 cut(s)	1140
BpuEI	CTTGAG	1 cut(s)	486
BpuMI	CCSGG	2 cut(s)	2095, 2096
Bsa29I	ATCGAT	2 cut(s)	822, 1853
BsaAI	YACGTR	1 cut(s)	2918
BsaBI	GATNNNNATC	1 cut(s)	810
BsaI	GGTCTC	1 cut(s)	2058
BsaJI	CCNNGG	8 cut(s)	665, 1234, 1235, 1577, 2064, 2094, 2778, 2832
BsaWI	WCCGGW	2 cut(s)	2234, 2723
BsaXI	ACNNNNNCTCC	2 cut(s)	1870, 1900
Bsc4I	CCNNNNNNNGG	5 cut(s)	35, 36, 846, 1498, 1700
Bse118I	RCCGGY	1 cut(s)	2723
Bse3DI	GCAATG	3 cut(s)	1503, 1631, 1911
Bse8I	GATNNNNATC	1 cut(s)	810
BseAI	TCCGGA	1 cut(s)	2234
BseBI	CCWGG	5 cut(s)	666, 1236, 2188, 2511, 2621
BseCI	ATCGAT	2 cut(s)	822, 1853
BseDI	CCNNGG	8 cut(s)	665, 1234, 1235, 1577, 2064, 2094, 2778, 2832
BseJI	GATNNNNATC	1 cut(s)	810
BseLI	CCNNNNNNNGG	5 cut(s)	35, 36, 846, 1498, 1700
BseMI	GCAATG	3 cut(s)	1503, 1631, 1911
BseMII	CTCAG	3 cut(s)	716, 933, 1212
BseRI	GAGGAG	1 cut(s)	2454
BseSI	GKGCMC	1 cut(s)	30
BseXI	GCAGC	4 cut(s)	1156, 2178, 2941, 2968
Bsh1236I	CGCG	1 cut(s)	647
BshFI	GGCC	4 cut(s)	474, 1503, 1910, 1952
BshTI	ACCGGT	1 cut(s)	2723
BshVI	ATCGAT	2 cut(s)	822, 1853
BsiHKAI	GWGCWC	5 cut(s)	261, 529, 591, 1534, 2431
BsiHKCI	CYCGRG	1 cut(s)	2094
BsiSI	CCGG	4 cut(s)	546, 2095, 2235, 2724
BslFI	GGGAC	4 cut(s)	822, 940, 1335, 2802
BslI	CCNNNNNNNGG	5 cut(s)	35, 36, 846, 1498, 1700
BsmAI	GTCTC	3 cut(s)	705, 2058, 2438
BsmFI	GGGAC	4 cut(s)	822, 940, 1335, 2802
BsmI	GAATGC	2 cut(s)	1991, 2932
BsnI	GGCC	4 cut(s)	474, 1503, 1910, 1952
Bso31I	GGTCTC	1 cut(s)	2058
BsoBI	CYCGRG	1 cut(s)	2094
Bsp1286I	GDGCHC	7 cut(s)	30, 261, 529, 591, 1235, 1534, 2431
Bsp13I	TCCGGA	1 cut(s)	2234
Bsp143I	GATC	9 cut(s)	210, 811, 1063, 1261, 1943, 2017, 2158, 2237, 2857
Bsp1720I	GCTNAGC	1 cut(s)	1140
BspACI	CCGC	7 cut(s)	19, 30, 36, 397, 647, 920, 2566
BspANI	GGCC	4 cut(s)	474, 1503, 1910, 1952
BspCNI	CTCAG	3 cut(s)	715, 934, 1213
BspDI	ATCGAT	2 cut(s)	822, 1853
BspEI	TCCGGA	1 cut(s)	2234
BspFNI	CGCG	1 cut(s)	647
BspHI	TCATGA	2 cut(s)	742, 2331
BspLI	GGNNCC	8 cut(s)	41, 777, 813, 956, 1256, 1323, 1324, 2515
BspMAI	CTGCAG	2 cut(s)	999, 2196
BspPI	GGATC	6 cut(s)	806, 819, 1071, 2025, 2153, 2245
BspQI	GCTCTTC	1 cut(s)	2693
BspTNI	GGTCTC	1 cut(s)	2058
BsrDI	GCAATG	3 cut(s)	1503, 1631, 1911
BsrFI	RCCGGY	1 cut(s)	2723
BssAI	RCCGGY	1 cut(s)	2723
BssECI	CCNNGG	8 cut(s)	665, 1234, 1235, 1577, 2064, 2094, 2778, 2832
BssMI	GATC	9 cut(s)	210, 811, 1063, 1261, 1943, 2017, 2158, 2237, 2857
BssSI	CACGAG	1 cut(s)	1521
BssT1I	CCWWGG	3 cut(s)	1577, 2064, 2778
Bst2BI	CACGAG	1 cut(s)	1521
Bst2UI	CCWGG	5 cut(s)	666, 1236, 2188, 2511, 2621
Bst4CI	ACNGT	5 cut(s)	901, 1375, 1695, 1935, 2317
Bst6I	CTCTTC	1 cut(s)	2693
BstAPI	GCANNNNNTGC	3 cut(s)	1136, 1157, 1874
BstBAI	YACGTR	1 cut(s)	2918
BstDEI	CTNAG	5 cut(s)	702, 942, 1140, 1221, 2603
BstDSI	CCRYGG	1 cut(s)	2832
BstEII	GGTNACC	1 cut(s)	2102
BstFNI	CGCG	1 cut(s)	647
BstKTI	GATC	9 cut(s)	213, 814, 1066, 1264, 1946, 2020, 2161, 2240, 2860
BstMAI	GTCTC	3 cut(s)	705, 2058, 2438
BstMBI	GATC	9 cut(s)	210, 811, 1063, 1261, 1943, 2017, 2158, 2237, 2857
BstNI	CCWGG	5 cut(s)	666, 1236, 2188, 2511, 2621
BstNSI	RCATGY	2 cut(s)	2080, 2817
BstPI	GGTNACC	1 cut(s)	2102
BstSCI	CCNGG	7 cut(s)	664, 1234, 2093, 2094, 2186, 2509, 2619
BstSFI	CTRYAG	2 cut(s)	995, 2192
BstSLI	GKGCMC	1 cut(s)	30
BstUI	CGCG	1 cut(s)	647
BstV1I	GCAGC	4 cut(s)	1156, 2178, 2941, 2968
BstV2I	GAAGAC	4 cut(s)	527, 687, 1832, 2159
BstX2I	RGATCY	3 cut(s)	811, 1261, 2017
BstXI	CCANNNNNNTGG	1 cut(s)	1963
BstYI	RGATCY	3 cut(s)	811, 1261, 2017
Bsu15I	ATCGAT	2 cut(s)	822, 1853
BsuRI	GGCC	4 cut(s)	474, 1503, 1910, 1952
BsuTUI	ATCGAT	2 cut(s)	822, 1853
BtgI	CCRYGG	1 cut(s)	2832
BtsI	GCAGTG	1 cut(s)	194
BtsIMutI	CAGTG	8 cut(s)	111, 194, 213, 633, 716, 906, 2711, 2803
CaiI	CAGNNNCTG	2 cut(s)	1622, 2620
CciI	TCATGA	2 cut(s)	742, 2331
Cfr10I	RCCGGY	1 cut(s)	2723
Cfr13I	GGNCC	6 cut(s)	472, 706, 954, 1322, 1501, 1909
Cfr9I	CCCGGG	1 cut(s)	2094
ClaI	ATCGAT	2 cut(s)	822, 1853
CseI	GACGC	1 cut(s)	893
Csp6I	GTAC	5 cut(s)	450, 1242, 1691, 2074, 2891
CspAI	ACCGGT	1 cut(s)	2723
CviQI	GTAC	5 cut(s)	450, 1242, 1691, 2074, 2891
DdeI	CTNAG	5 cut(s)	702, 942, 1140, 1221, 2603
DpnI	GATC	9 cut(s)	212, 813, 1065, 1263, 1945, 2019, 2160, 2239, 2859
DpnII	GATC	9 cut(s)	210, 811, 1063, 1261, 1943, 2017, 2158, 2237, 2857
DraI	TTTAAA	1 cut(s)	2131
DraIII	CACNNNGTG	2 cut(s)	1136, 1834
Eam1104I	CTCTTC	1 cut(s)	2693
EarI	CTCTTC	1 cut(s)	2693
EciI	GGCGGA	1 cut(s)	34
Ecl136II	GAGCTC	2 cut(s)	527, 2429
Eco130I	CCWWGG	3 cut(s)	1577, 2064, 2778
Eco147I	AGGCCT	1 cut(s)	1952
Eco24I	GRGCYC	3 cut(s)	529, 1235, 2431
Eco31I	GGTCTC	1 cut(s)	2058
Eco32I	GATATC	5 cut(s)	118, 652, 1425, 2229, 2322
Eco47I	GGWCC	3 cut(s)	706, 954, 1322
Eco53kI	GAGCTC	2 cut(s)	527, 2429
Eco57I	CTGAAG	1 cut(s)	2153
Eco72I	CACGTG	1 cut(s)	2918
Eco88I	CYCGRG	1 cut(s)	2094
Eco91I	GGTNACC	1 cut(s)	2102
EcoICRI	GAGCTC	2 cut(s)	527, 2429
EcoO109I	RGGNCCY	2 cut(s)	472, 1322
EcoO65I	GGTNACC	1 cut(s)	2102
EcoRI	GAATTC	1 cut(s)	201
EcoRII	CCWGG	5 cut(s)	664, 1234, 2186, 2509, 2619
EcoRV	GATATC	5 cut(s)	118, 652, 1425, 2229, 2322
EcoT14I	CCWWGG	3 cut(s)	1577, 2064, 2778
EcoT22I	ATGCAT	2 cut(s)	290, 2416
EcoT38I	GRGCYC	3 cut(s)	529, 1235, 2431
ErhI	CCWWGG	3 cut(s)	1577, 2064, 2778
FalI	AAGNNNNNCTT	6 cut(s)	711, 743, 1824, 1856, 2372, 2404
FaqI	GGGAC	4 cut(s)	822, 940, 1335, 2802
FauI	CCCGC	2 cut(s)	29, 37
FauNDI	CATATG	1 cut(s)	456
FblI	GTMKAC	1 cut(s)	2178
Fnu4HI	GCNGC	4 cut(s)	1145, 2192, 2930, 2982
FokI	GGATG	9 cut(s)	149, 1661, 1682, 1734, 2022, 2218, 2264, 2372, 2786
FriOI	GRGCYC	3 cut(s)	529, 1235, 2431
Fsp4HI	GCNGC	4 cut(s)	1145, 2192, 2930, 2982
GluI	GCNGC	4 cut(s)	1145, 2192, 2930, 2982
GsuI	CTGGAG	4 cut(s)	1730, 1939, 2493, 2779
HaeIII	GGCC	4 cut(s)	474, 1503, 1910, 1952
HapII	CCGG	4 cut(s)	546, 2095, 2235, 2724
HgaI	GACGC	1 cut(s)	893
HincII	GTYRAC	2 cut(s)	424, 2179
HindII	GTYRAC	2 cut(s)	424, 2179
HindIII	AAGCTT	1 cut(s)	2656
HinfI	GANTC	9 cut(s)	364, 400, 746, 835, 1013, 1837, 2210, 2624, 2896
HpaII	CCGG	4 cut(s)	546, 2095, 2235, 2724
HphI	GGTGA	8 cut(s)	596, 1108, 1472, 1820, 2114, 2394, 2512, 2867
Hpy166II	GTNNAC	6 cut(s)	347, 424, 452, 1938, 2179, 2729
Hpy188I	TCNGA	7 cut(s)	363, 771, 1180, 1735, 2356, 2563, 2851
Hpy8I	GTNNAC	6 cut(s)	347, 424, 452, 1938, 2179, 2729
Hpy99I	CGWCG	2 cut(s)	679, 909
HpyCH4III	ACNGT	5 cut(s)	901, 1375, 1695, 1935, 2317
HpyCH4IV	ACGT	2 cut(s)	532, 2917
HpyF3I	CTNAG	5 cut(s)	702, 942, 1140, 1221, 2603
HpySE526I	ACGT	2 cut(s)	532, 2917
KflI	GGGWCCC	1 cut(s)	1322
Kpn2I	TCCGGA	1 cut(s)	2234
Kzo9I	GATC	9 cut(s)	210, 811, 1063, 1261, 1943, 2017, 2158, 2237, 2857
LguI	GCTCTTC	1 cut(s)	2693
LmnI	GCTCC	7 cut(s)	319, 1529, 1579, 2426, 2434, 2622, 2878
Lsp1109I	GCAGC	4 cut(s)	1156, 2178, 2941, 2968
MaeII	ACGT	2 cut(s)	532, 2917
MaeIII	GTNAC	8 cut(s)	236, 628, 999, 1114, 1826, 1958, 2102, 2719
MalI	GATC	9 cut(s)	212, 813, 1065, 1263, 1945, 2019, 2160, 2239, 2859
MboI	GATC	9 cut(s)	210, 811, 1063, 1261, 1943, 2017, 2158, 2237, 2857
MflI	RGATCY	3 cut(s)	811, 1261, 2017
MhlI	GDGCHC	7 cut(s)	30, 261, 529, 591, 1235, 1534, 2431
MlyI	GAGTC	3 cut(s)	844, 1846, 2219
MmeI	TCCRAC	4 cut(s)	1203, 1291, 1507, 1995
Mph1103I	ATGCAT	2 cut(s)	290, 2416
MroI	TCCGGA	1 cut(s)	2234
MseI	TTAA	8 cut(s)	273, 729, 1110, 1820, 2130, 2268, 2306, 2610
MslI	CAYNNNNRTG	3 cut(s)	626, 1071, 2455
MspA1I	CMGCKG	1 cut(s)	1987
MspI	CCGG	4 cut(s)	546, 2095, 2235, 2724
MspR9I	CCNGG	7 cut(s)	666, 1236, 2095, 2096, 2188, 2511, 2621
Mva1269I	GAATGC	2 cut(s)	1991, 2932
MvaI	CCWGG	5 cut(s)	666, 1236, 2188, 2511, 2621
MvnI	CGCG	1 cut(s)	647
NciI	CCSGG	2 cut(s)	2095, 2096
NdeI	CATATG	1 cut(s)	456
NdeII	GATC	9 cut(s)	210, 811, 1063, 1261, 1943, 2017, 2158, 2237, 2857
NlaIV	GGNNCC	8 cut(s)	41, 777, 813, 956, 1256, 1323, 1324, 2515
NmuCI	GTSAC	6 cut(s)	628, 999, 1114, 1826, 1958, 2102
NsiI	ATGCAT	2 cut(s)	290, 2416
NspI	RCATGY	2 cut(s)	2080, 2817
PagI	TCATGA	2 cut(s)	742, 2331
PasI	CCCWGGG	1 cut(s)	1235
PceI	AGGCCT	1 cut(s)	1952
PciI	ACATGT	1 cut(s)	2813
PciSI	GCTCTTC	1 cut(s)	2693
PctI	GAATGC	2 cut(s)	1991, 2932
PfeI	GAWTC	6 cut(s)	364, 400, 746, 1013, 2624, 2896
PfoI	TCCNGGA	1 cut(s)	2619
PinAI	ACCGGT	1 cut(s)	2723
PkrI	GCNGC	4 cut(s)	1146, 2193, 2931, 2983
PleI	GAGTC	3 cut(s)	843, 1845, 2218
PmaCI	CACGTG	1 cut(s)	2918
PmlI	CACGTG	1 cut(s)	2918
PpsI	GAGTC	3 cut(s)	843, 1845, 2218
Ppu21I	YACGTR	1 cut(s)	2918
PpuMI	RGGWCCY	1 cut(s)	1322
PscI	ACATGT	1 cut(s)	2813
PsiI	TTATAA	3 cut(s)	431, 1920, 2217
Psp124BI	GAGCTC	2 cut(s)	529, 2431
Psp5II	RGGWCCY	1 cut(s)	1322
Psp6I	CCWGG	5 cut(s)	664, 1234, 2186, 2509, 2619
PspCI	CACGTG	1 cut(s)	2918
PspEI	GGTNACC	1 cut(s)	2102
PspGI	CCWGG	5 cut(s)	664, 1234, 2186, 2509, 2619
PspN4I	GGNNCC	8 cut(s)	41, 777, 813, 956, 1256, 1323, 1324, 2515
PspPI	GGNCC	6 cut(s)	472, 706, 954, 1322, 1501, 1909
PspPPI	RGGWCCY	1 cut(s)	1322
PstI	CTGCAG	2 cut(s)	999, 2196
PstNI	CAGNNNCTG	2 cut(s)	1622, 2620
PsuI	RGATCY	3 cut(s)	811, 1261, 2017
PvuII	CAGCTG	1 cut(s)	1987
RsaI	GTAC	5 cut(s)	451, 1243, 1692, 2075, 2892
RsaNI	GTAC	5 cut(s)	450, 1242, 1691, 2074, 2891
RseI	CAYNNNNRTG	3 cut(s)	626, 1071, 2455
SacI	GAGCTC	2 cut(s)	529, 2431
SalI	GTCGAC	1 cut(s)	2177
SapI	GCTCTTC	1 cut(s)	2693
SaqAI	TTAA	8 cut(s)	273, 729, 1110, 1820, 2130, 2268, 2306, 2610
SatI	GCNGC	4 cut(s)	1145, 2192, 2930, 2982
Sau3AI	GATC	9 cut(s)	210, 811, 1063, 1261, 1943, 2017, 2158, 2237, 2857
Sau96I	GGNCC	6 cut(s)	472, 706, 954, 1322, 1501, 1909
SchI	GAGTC	3 cut(s)	844, 1846, 2219
ScrFI	CCNGG	7 cut(s)	666, 1236, 2095, 2096, 2188, 2511, 2621
SduI	GDGCHC	7 cut(s)	30, 261, 529, 591, 1235, 1534, 2431
SfcI	CTRYAG	2 cut(s)	995, 2192
SinI	GGWCC	3 cut(s)	706, 954, 1322
SmaI	CCCGGG	1 cut(s)	2096
SmiMI	CAYNNNNRTG	3 cut(s)	626, 1071, 2455
SmlI	CTYRAG	1 cut(s)	501
SmoI	CTYRAG	1 cut(s)	501
SrfI	GCCCGGGC	1 cut(s)	2096
SseBI	AGGCCT	1 cut(s)	1952
SsiI	CCGC	7 cut(s)	19, 30, 36, 397, 647, 920, 2566
SspI	AATATT	2 cut(s)	692, 1360
SstI	GAGCTC	2 cut(s)	529, 2431
StuI	AGGCCT	1 cut(s)	1952
StyD4I	CCNGG	7 cut(s)	664, 1234, 2093, 2094, 2186, 2509, 2619
StyI	CCWWGG	3 cut(s)	1577, 2064, 2778
TaaI	ACNGT	5 cut(s)	901, 1375, 1695, 1935, 2317
TaiI	ACGT	2 cut(s)	535, 2920
TaqI	TCGA	9 cut(s)	14, 382, 822, 907, 1229, 1853, 2178, 2634, 2887
TatI	WGTACW	3 cut(s)	449, 1241, 2890
TfiI	GAWTC	6 cut(s)	364, 400, 746, 1013, 2624, 2896
Tru1I	TTAA	8 cut(s)	273, 729, 1110, 1820, 2130, 2268, 2306, 2610
Tru9I	TTAA	8 cut(s)	273, 729, 1110, 1820, 2130, 2268, 2306, 2610
TscAI	CASTG	8 cut(s)	118, 201, 220, 633, 716, 906, 2711, 2803
TseFI	GTSAC	6 cut(s)	628, 999, 1114, 1826, 1958, 2102
TseI	GCWGC	4 cut(s)	1144, 2191, 2929, 2981
Tsp45I	GTSAC	6 cut(s)	628, 999, 1114, 1826, 1958, 2102
TspGWI	ACGGA	1 cut(s)	692
TspMI	CCCGGG	1 cut(s)	2094
TspRI	CASTG	8 cut(s)	118, 201, 220, 633, 716, 906, 2711, 2803
VpaK11BI	GGWCC	3 cut(s)	706, 954, 1322
XapI	RAATTY	5 cut(s)	201, 1894, 2339, 2801, 2969
XbaI	TCTAGA	1 cut(s)	2020
XceI	RCATGY	2 cut(s)	2080, 2817
XcmI	CCANNNNNNNNNTGG	1 cut(s)	662
XmaI	CCCGGG	1 cut(s)	2094
XmiI	GTMKAC	1 cut(s)	2178
Zsp2I	ATGCAT	2 cut(s)	290, 2416

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.