MD04G1007900.v1.1

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
OG0003224
Physical Location & Seq
Reverse (-)
889287 .. 906525
17239 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1007900.v1.1.491

Sequence Viewer

Length: 2811 bp
ATGAAGAACCCACTGCGAATTCCCAAGATCACTGATAGCTTGGAGCAACGATGTTACAAGGATTTGCGAAATGAGCACTTTGGATCTGTTACAGTGGTGCTATGCATTTATAGGAAGCTGTTATCTTCATGTAAGGAGCAAATGCCACTATTTGCCAGTAGTTTACTAGGAATTGTCCGGATTCTTTTGGAACAAACTCGACATGATGAAATGCGGATTCTGGGTTGCAATACTCTCGTCGACTTTATACAAAGCCAGACTGACAGTACGCACATGTTCAGCCTAGAGGGCCTTATTCCTAAACTTTGTCAAATGGCTCAAGAAGTGGGAGATAATGAAAGAGCTCTACGATTACGTTCATCTGGACTGCAATCTCTGGCTTTTATGGTGTGGTTCATGGGTGAGCACTCTCATATTTCAATGGACTTTGACACTATCATATCAGTGACTTTGGAAAACTATGCGGATATCTATACTAAGCCTGTAAGTCTGAAGGAAGACAGACGATATTCTGAGTCTCAGGACCAGTGGGTTAATGGAGTGCTAAAAGCAGAAGTTCATGATTCATCTTTTCCTGTTATTAGTCAGAAGGTTACTTCACTACCAAGTCTGGAAAACCCTGATTTGGATCCCACAATTGATACCAACAAGAGCCCCTCTTACTGGTCTAGGGTTTGCTTGCGTAACATAGCAAAATTGGCAAAGGAAGCTACTACAGTGCGTCGAGTGCTTGAGCCGCTTTTTCAAAGTTTTGATGCTGAGAACCATTGGTCCCCAGAAAAACCACTTGCCTATAATGTTTTAATGTATATGCAGTCACTTTTAGAGGAATCAGGAGATAATTCCCATCTGTTATTACATATATTGGTCAAGCACTTGGATCATAAGAATGTTGTCAAACAACCTCGCCTACAAACTGATATTGTTAATGTCACCACACAAATAGCACAAGGTGCAAAGCAGCAGGCGTCGGTTGCGATTACTGGTGCAATATCTGATCTGATTAAACATTTACGAAAATGCCTGCAAATTCAAGCTGCTGTATCAAGCCCTAGGAGTTTAGATAAAGGGAACCCAGATCTCCGATCGGCACTTGAAAGATGCATCTCGCAGTTATCAAATAAGGTTGGAGATGTGGGACCCATACTTGATATGATGGCTGTGGTGCTAGAGAATATTTCAACTATTACTGCTGTTGCTAGGGCGACAATCTCTGCTGTTTATCTAACTGCAAAGATAGTCTCTACTGTTCCTAATGTATCATATCACAAGAAGGCTTTTCCTGATGCTCTATTTCACCAATTACTCCTAGCAATGGCCCACCCAGACCATGAAACACGAGTTGGAGCACACAGCATTTTCTCTATGGTGCTTATGCCTTCCCTACTTGCTCCTTGGTTAGAGCAGAAAATGAACCCTCTGCAAGCTGTTTCTGCATCTGTTAGTACATTGCAGAAGGTAAAGGAGGGAAGTTTCTCCCTTCAGGATGAAGAGAAAGATGCAGTAGTACCTTTGAATGGAGAACTGAGGGAAGAAGGAAGTAAAATATCATCAGATGTCTATGAGAAACAATCTGGTCAATCTCACAACTTCAAGAGTGCTATGACTTGTGGAAGAACAGATCTAACATCCCTTCGGTTAAGTAGTCACCAAGTGAGTCTTTTGCTTTCATCAATCTGGGTTCAGGCAACATCTGCAGAGAATACCCCTGAGAACTTTGAGGCAATGGCCCACACTTATAACGTCGCGTTACTGTTTACCCGATCAAAGGCCTCCAGTCACGTGGCTTTAGTAAGATGTTTCCAGCTGGCATTTTCTATTAGAACTATTTCCTTGGATGTAGATGGTGGTTTGGACCCATCTCGTAGAAGGTCTCTCTTTACCCTGGCCTCGTACATGCTTATATTTTCAGCCCGGGCTGGTGACCTCCCAGAGCTAATTCCAATTTTCAAAGCATCTATGACAGATAGAATGGTTGATCCCGGTCTTCAGTTAGTTGATGGTATCTGGCTGCAGGCAGTTTCTATTGAATCTGATAAGGAGAGGATATCTTATGGATCATTGCGGGAAGATGAAGTGGCTGCATTGAAGTCTCTGTCAGCAGTTGAATTAGATGACCAGCTACTAAGAGAAACTGTGATATCCCACTTCATGATTAAATTTGCAAAATTGTCTGAGGTTGAGTTGTCTAGCATCAAGAAGGAACTCTTACAAGGATTTTCACCTGATGATTCATTTCCTTTAGGAGCTCCGCTATTCATGGAGACACCACGACCATGTTCTCCTCTTGCCCAGATAGATTTTCCTGAATTTGATGAGGTGATGCCTCCAGGTTCATTGACAGATGATGAAGCCTACCCTGAACCAAGTGGAAGTCAGTCAGACCGCAAATCATCACTCTCCATCAATACACTTGACATTCTAAGCGTTAATCAGCTCCTGGATTCAGTTCTGGAAACAGCACGAGAAGTTGCAAGCAACCCAGTTTCCACAACACCGATACCTTATGACCAAATGAAGAGTCAATGTGAAGCCCTTGTAACAGGTAAACAACAGAAGATGGCAGTTCTTCATAGTTTCAAGCAAGCAGACACCATGGCGATAGTCCTCTCCAGTGAAAGTGAAAATACATGCCACACGTTATCAACCACGGCGACGGAATTTTCAGAAGGGGATCTAAAGTTGACAAACAATGATCAAATTCGAGTACAAAATCAACTTCTCCTCTGCTCGCGTGAGTATGGACAGCATTCTTTCAAACTACCGCCTTCAAGTCCCTATGACAAATTCTTGAAAGCTGCCGGATGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

937

Amino Acids

104.03

Weight (kDa)

5.68

Isoelectric Point (pI)

44.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EFR3_ARM PF21052 4 - 91 7.5e-18 EFR3, armadillo repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1740
AccI GTMKAC 1 cut(s) 240
AccII CGCG 2 cut(s) 1748, 2734
AccIII TCCGGA 1 cut(s) 177
AciI CCGC 7 cut(s) 214, 464, 737, 2065, 2252, 2386, 2765
AclWI GGATC 7 cut(s) 91, 623, 636, 888, 1973, 2065, 2682
AcsI RAATTY 7 cut(s) 18, 1029, 2159, 2309, 2660, 2700, 2786
AcuI CTGAAG 3 cut(s) 512, 1466, 1973
AcvI CACGTG 1 cut(s) 1783
AcyI GRCGYC 1 cut(s) 968
AdeI CACNNNGTG 2 cut(s) 953, 1654
AfaI GTAC 5 cut(s) 268, 1447, 1509, 1895, 2709
AfiI CCNNNNNNNGG 5 cut(s) 625, 663, 1315, 1517, 1768
AflIII ACRYGT 2 cut(s) 273, 2637
AjnI CCWGG 3 cut(s) 1884, 2329, 2439
AjuI GAANNNNNNNTTGG 2 cut(s) 1326, 1358
AloI GAACNNNNNNTCC 2 cut(s) 755, 787
Alw21I GWGCWC 5 cut(s) 78, 346, 408, 1351, 2251
Alw26I GTCTC 5 cut(s) 522, 1246, 1878, 2097, 2258
AlwI GGATC 7 cut(s) 91, 623, 636, 888, 1973, 2065, 2682
AlwNI CAGNNNCTG 1 cut(s) 2440
Ama87I CYCGRG 1 cut(s) 1914
Aor13HI TCCGGA 1 cut(s) 177
AoxI GGCC 5 cut(s) 289, 1317, 1728, 1770, 1887
ApeKI GCWGC 5 cut(s) 961, 1037, 2011, 2081, 2798
ApoI RAATTY 7 cut(s) 18, 1029, 2159, 2309, 2660, 2700, 2786
ArsI GACNNNNNNTTYG 2 cut(s) 2506, 2538
Asp700I GAANNNNTTC 1 cut(s) 1828
AspA2I CCTAGG 1 cut(s) 1052
AspS9I GGNCC 7 cut(s) 289, 523, 771, 1139, 1318, 1729, 1855
AsuC2I CCSGG 3 cut(s) 1915, 1916, 1983
AsuHPI GGTGA 7 cut(s) 413, 925, 1289, 1640, 1934, 2214, 2332
AvaI CYCGRG 1 cut(s) 1914
AvaII GGWCC 4 cut(s) 523, 771, 1139, 1855
AvrII CCTAGG 1 cut(s) 1052
BamHI GGATCC 1 cut(s) 628
BanII GRGCYC 3 cut(s) 346, 656, 2251
BauI CACGAG 2 cut(s) 1338, 2463
BbrPI CACGTG 1 cut(s) 1783
BbsI GAAGAC 2 cut(s) 504, 1979
Bbv12I GWGCWC 5 cut(s) 78, 346, 408, 1351, 2251
BbvI GCAGC 5 cut(s) 973, 1024, 1998, 2068, 2785
BccI CCATC 7 cut(s) 855, 1150, 1838, 1867, 1994, 2411, 2554
BceAI ACGGC 1 cut(s) 2667
BcgI CGANNNNNNTGC 2 cut(s) 217, 251
BciT130I CCWGG 3 cut(s) 1886, 2331, 2441
BclI TGATCA 1 cut(s) 2695
BcnI CCSGG 3 cut(s) 1915, 1916, 1983
BcoDI GTCTC 5 cut(s) 522, 1246, 1878, 2097, 2258
BfaI CTAG 8 cut(s) 167, 284, 669, 1053, 1169, 1200, 1310, 2190
BfmI CTRYAG 3 cut(s) 714, 1695, 2012
BglI GCCNNNNNGGC 1 cut(s) 288
BglII AGATCT 2 cut(s) 1078, 1621
BisI GCNGC 6 cut(s) 737, 962, 1038, 2012, 2082, 2799
BlnI CCTAGG 1 cut(s) 1052
BlsI GCNGC 6 cut(s) 738, 963, 1039, 2013, 2083, 2800
Bme1390I CCNGG 6 cut(s) 1886, 1915, 1916, 1983, 2331, 2441
Bme18I GGWCC 4 cut(s) 523, 771, 1139, 1855
BmeT110I CYCGRG 1 cut(s) 1914
BmgT120I GGNCC 7 cut(s) 289, 523, 771, 1139, 1318, 1729, 1855
BmiI GGNNCC 6 cut(s) 630, 773, 1073, 1140, 1141, 1857
BmrFI CCNGG 6 cut(s) 1886, 1915, 1916, 1983, 2331, 2441
BmrI ACTGGG 1 cut(s) 2477
BmuI ACTGGG 1 cut(s) 2477
BpiI GAAGAC 2 cut(s) 504, 1979
BpmI CTGGAG 3 cut(s) 1759, 2313, 2596
BpuEI CTTGAG 2 cut(s) 303, 752
BpuMI CCSGG 3 cut(s) 1915, 1916, 1983
BsaAI YACGTR 1 cut(s) 1783
BsaBI GATNNNNATC 1 cut(s) 627
BsaHI GRCGYC 1 cut(s) 968
BsaI GGTCTC 1 cut(s) 1878
BsaJI CCNNGG 7 cut(s) 1052, 1394, 1833, 1884, 1914, 2595, 2649
BsaWI WCCGGW 1 cut(s) 177
Bsc4I CCNNNNNNNGG 5 cut(s) 625, 663, 1315, 1517, 1768
Bse1I ACTGG 7 cut(s) 156, 526, 668, 988, 1776, 2483, 2613
Bse3DI GCAATG 4 cut(s) 1320, 1448, 1731, 2060
Bse8I GATNNNNATC 1 cut(s) 627
BseAI TCCGGA 1 cut(s) 177
BseBI CCWGG 3 cut(s) 1886, 2331, 2441
BseDI CCNNGG 7 cut(s) 1052, 1394, 1833, 1884, 1914, 2595, 2649
BseGI GGATG 4 cut(s) 1492, 1628, 1843, 2810
BseJI GATNNNNATC 1 cut(s) 627
BseLI CCNNNNNNNGG 5 cut(s) 625, 663, 1315, 1517, 1768
BseMI GCAATG 4 cut(s) 1320, 1448, 1731, 2060
BseMII CTCAG 6 cut(s) 504, 533, 750, 1517, 1701, 2166
BseNI ACTGG 7 cut(s) 156, 526, 668, 988, 1776, 2483, 2613
BseRI GAGGAG 2 cut(s) 2274, 2714
BseXI GCAGC 5 cut(s) 973, 1024, 1998, 2068, 2785
Bsh1236I CGCG 2 cut(s) 1748, 2734
Bsh1285I CGRYCG 1 cut(s) 1088
BshFI GGCC 5 cut(s) 291, 1319, 1730, 1772, 1889
BsiEI CGRYCG 1 cut(s) 1088
BsiHKAI GWGCWC 5 cut(s) 78, 346, 408, 1351, 2251
BsiHKCI CYCGRG 1 cut(s) 1914
BsiSI CCGG 4 cut(s) 178, 1915, 1983, 2802
BslFI GGGAC 3 cut(s) 757, 1152, 2760
BslI CCNNNNNNNGG 5 cut(s) 625, 663, 1315, 1517, 1768
BsmAI GTCTC 5 cut(s) 522, 1246, 1878, 2097, 2258
BsmFI GGGAC 3 cut(s) 757, 1152, 2760
BsmI GAATGC 1 cut(s) 2749
BsnI GGCC 5 cut(s) 291, 1319, 1730, 1772, 1889
Bso31I GGTCTC 1 cut(s) 1878
BsoBI CYCGRG 1 cut(s) 1914
Bsp1286I GDGCHC 6 cut(s) 78, 346, 408, 656, 1351, 2251
Bsp13I TCCGGA 1 cut(s) 177
Bsp19I CCATGG 1 cut(s) 2595
BspACI CCGC 7 cut(s) 214, 464, 737, 2065, 2252, 2386, 2765
BspANI GGCC 5 cut(s) 291, 1319, 1730, 1772, 1889
BspCNI CTCAG 6 cut(s) 505, 532, 751, 1518, 1702, 2167
BspEI TCCGGA 1 cut(s) 177
BspFNI CGCG 2 cut(s) 1748, 2734
BspHI TCATGA 2 cut(s) 559, 2151
BspLI GGNNCC 6 cut(s) 630, 773, 1073, 1140, 1141, 1857
BspMAI CTGCAG 2 cut(s) 1699, 2016
BspPI GGATC 7 cut(s) 91, 623, 636, 888, 1973, 2065, 2682
BspTNI GGTCTC 1 cut(s) 1878
BsrDI GCAATG 4 cut(s) 1320, 1448, 1731, 2060
BsrI ACTGG 7 cut(s) 156, 526, 668, 988, 1776, 2483, 2613
BssECI CCNNGG 7 cut(s) 1052, 1394, 1833, 1884, 1914, 2595, 2649
BssNI GRCGYC 1 cut(s) 968
BssSI CACGAG 2 cut(s) 1338, 2463
BssT1I CCWWGG 4 cut(s) 1052, 1394, 1833, 2595
Bst2BI CACGAG 2 cut(s) 1338, 2463
Bst2UI CCWGG 3 cut(s) 1886, 2331, 2441
Bst4CI ACNGT 6 cut(s) 94, 266, 718, 1249, 1755, 2137
Bst6I CTCTTC 2 cut(s) 1485, 2513
BstACI GRCGYC 1 cut(s) 968
BstAPI GCANNNNNTGC 2 cut(s) 953, 1694
BstBAI YACGTR 1 cut(s) 1783
BstC8I GCNNGC 9 cut(s) 680, 966, 1025, 1425, 1809, 2016, 2476, 2586, 2732
BstDEI CTNAG 9 cut(s) 477, 513, 519, 759, 1526, 1710, 2126, 2175, 2423
BstDSI CCRYGG 2 cut(s) 2595, 2649
BstEII GGTNACC 1 cut(s) 1922
BstF5I GGATG 4 cut(s) 1492, 1628, 1843, 2810
BstFNI CGCG 2 cut(s) 1748, 2734
BstMAI GTCTC 5 cut(s) 522, 1246, 1878, 2097, 2258
BstMCI CGRYCG 1 cut(s) 1088
BstNI CCWGG 3 cut(s) 1886, 2331, 2441
BstNSI RCATGY 3 cut(s) 277, 1900, 2634
BstPI GGTNACC 1 cut(s) 1922
BstSCI CCNGG 6 cut(s) 1884, 1913, 1914, 1981, 2329, 2439
BstSFI CTRYAG 3 cut(s) 714, 1695, 2012
BstUI CGCG 2 cut(s) 1748, 2734
BstV1I GCAGC 5 cut(s) 973, 1024, 1998, 2068, 2785
BstV2I GAAGAC 2 cut(s) 504, 1979
BstX2I RGATCY 5 cut(s) 83, 628, 1078, 1621, 2674
BstXI CCANNNNNNTGG 1 cut(s) 1783
BstYI RGATCY 5 cut(s) 83, 628, 1078, 1621, 2674
BsuRI GGCC 5 cut(s) 291, 1319, 1730, 1772, 1889
BtgI CCRYGG 2 cut(s) 2595, 2649
BtsCI GGATG 4 cut(s) 1492, 1628, 1843, 2810
BtsI GCAGTG 1 cut(s) 11
BtsIMutI CAGTG 7 cut(s) 11, 30, 99, 450, 533, 723, 2620
Cac8I GCNNGC 9 cut(s) 680, 966, 1025, 1425, 1809, 2016, 2476, 2586, 2732
CaiI CAGNNNCTG 1 cut(s) 2440
CciI TCATGA 2 cut(s) 559, 2151
Cfr13I GGNCC 7 cut(s) 289, 523, 771, 1139, 1318, 1729, 1855
Cfr9I CCCGGG 1 cut(s) 1914
CseI GACGC 2 cut(s) 710, 957
Csp6I GTAC 5 cut(s) 267, 1446, 1508, 1894, 2708
CviQI GTAC 5 cut(s) 267, 1446, 1508, 1894, 2708
DdeI CTNAG 9 cut(s) 477, 513, 519, 759, 1526, 1710, 2126, 2175, 2423
DraIII CACNNNGTG 2 cut(s) 953, 1654
Eam1104I CTCTTC 2 cut(s) 1485, 2513
EarI CTCTTC 2 cut(s) 1485, 2513
Ecl136II GAGCTC 2 cut(s) 344, 2249
Eco130I CCWWGG 4 cut(s) 1052, 1394, 1833, 2595
Eco147I AGGCCT 1 cut(s) 1772
Eco24I GRGCYC 3 cut(s) 346, 656, 2251
Eco31I GGTCTC 1 cut(s) 1878
Eco32I GATATC 3 cut(s) 469, 2049, 2142
Eco47I GGWCC 4 cut(s) 523, 771, 1139, 1855
Eco53kI GAGCTC 2 cut(s) 344, 2249
Eco57I CTGAAG 3 cut(s) 512, 1466, 1973
Eco72I CACGTG 1 cut(s) 1783
Eco88I CYCGRG 1 cut(s) 1914
Eco91I GGTNACC 1 cut(s) 1922
EcoICRI GAGCTC 2 cut(s) 344, 2249
EcoO109I RGGNCCY 2 cut(s) 289, 1139
EcoO65I GGTNACC 1 cut(s) 1922
EcoRI GAATTC 1 cut(s) 18
EcoRII CCWGG 3 cut(s) 1884, 2329, 2439
EcoRV GATATC 3 cut(s) 469, 2049, 2142
EcoT14I CCWWGG 4 cut(s) 1052, 1394, 1833, 2595
EcoT22I ATGCAT 2 cut(s) 107, 1106
EcoT38I GRGCYC 3 cut(s) 346, 656, 2251
ErhI CCWWGG 4 cut(s) 1052, 1394, 1833, 2595
FalI AAGNNNNNCTT 4 cut(s) 1644, 1676, 2192, 2224
FaqI GGGAC 3 cut(s) 757, 1152, 2760
FauI CCCGC 1 cut(s) 2058
FbaI TGATCA 1 cut(s) 2695
FblI GTMKAC 1 cut(s) 240
Fnu4HI GCNGC 6 cut(s) 737, 962, 1038, 2012, 2082, 2799
FokI GGATG 3 cut(s) 1499, 1615, 1850
FriOI GRGCYC 3 cut(s) 346, 656, 2251
Fsp4HI GCNGC 6 cut(s) 737, 962, 1038, 2012, 2082, 2799
FspBI CTAG 8 cut(s) 167, 284, 669, 1053, 1169, 1200, 1310, 2190
GluI GCNGC 6 cut(s) 737, 962, 1038, 2012, 2082, 2799
GsuI CTGGAG 3 cut(s) 1759, 2313, 2596
HaeIII GGCC 5 cut(s) 291, 1319, 1730, 1772, 1889
HapII CCGG 4 cut(s) 178, 1915, 1983, 2802
HgaI GACGC 2 cut(s) 710, 957
Hin1I GRCGYC 1 cut(s) 968
HincII GTYRAC 2 cut(s) 241, 2685
HindII GTYRAC 2 cut(s) 241, 2685
HpaII CCGG 4 cut(s) 178, 1915, 1983, 2802
HphI GGTGA 7 cut(s) 413, 925, 1289, 1640, 1934, 2214, 2332
Hpy166II GTNNAC 5 cut(s) 164, 241, 1758, 2549, 2685
Hpy8I GTNNAC 5 cut(s) 164, 241, 1758, 2549, 2685
Hpy99I CGWCG 5 cut(s) 242, 726, 973, 1748, 2659
HpyCH4III ACNGT 6 cut(s) 94, 266, 718, 1249, 1755, 2137
HpyCH4IV ACGT 4 cut(s) 355, 1743, 1782, 2639
HpyF3I CTNAG 9 cut(s) 477, 513, 519, 759, 1526, 1710, 2126, 2175, 2423
HpySE526I ACGT 4 cut(s) 355, 1743, 1782, 2639
Hsp92I GRCGYC 1 cut(s) 968
KflI GGGWCCC 1 cut(s) 1139
Kpn2I TCCGGA 1 cut(s) 177
Ksp22I TGATCA 1 cut(s) 2695
LmnI GCTCC 7 cut(s) 43, 136, 1346, 1396, 2246, 2254, 2442
Lsp1109I GCAGC 5 cut(s) 973, 1024, 1998, 2068, 2785
MaeI CTAG 8 cut(s) 167, 284, 669, 1053, 1169, 1200, 1310, 2190
MaeII ACGT 4 cut(s) 355, 1743, 1782, 2639
MfeI CAATTG 1 cut(s) 636
MflI RGATCY 5 cut(s) 83, 628, 1078, 1621, 2674
MhlI GDGCHC 6 cut(s) 78, 346, 408, 656, 1351, 2251
MlyI GAGTC 3 cut(s) 524, 1666, 2530
MmeI TCCRAC 2 cut(s) 1108, 1324
Mph1103I ATGCAT 2 cut(s) 107, 1106
MroI TCCGGA 1 cut(s) 177
MroXI GAANNNNTTC 1 cut(s) 1828
MseI TTAA 7 cut(s) 534, 803, 927, 1005, 1640, 2157, 2430
MslI CAYNNNNRTG 3 cut(s) 443, 888, 2275
MspA1I CMGCKG 1 cut(s) 1807
MspI CCGG 4 cut(s) 178, 1915, 1983, 2802
MspR9I CCNGG 6 cut(s) 1886, 1915, 1916, 1983, 2331, 2441
MunI CAATTG 1 cut(s) 636
Mva1269I GAATGC 1 cut(s) 2749
MvaI CCWGG 3 cut(s) 1886, 2331, 2441
MvnI CGCG 2 cut(s) 1748, 2734
NciI CCSGG 3 cut(s) 1915, 1916, 1983
NcoI CCATGG 1 cut(s) 2595
NlaIV GGNNCC 6 cut(s) 630, 773, 1073, 1140, 1141, 1857
NmuCI GTSAC 6 cut(s) 445, 816, 931, 1646, 1778, 1922
NsiI ATGCAT 2 cut(s) 107, 1106
NspI RCATGY 3 cut(s) 277, 1900, 2634
PagI TCATGA 2 cut(s) 559, 2151
PceI AGGCCT 1 cut(s) 1772
PciI ACATGT 1 cut(s) 273
PctI GAATGC 1 cut(s) 2749
PdmI GAANNNNTTC 1 cut(s) 1828
PfeI GAWTC 7 cut(s) 181, 217, 563, 830, 2030, 2231, 2444
PfoI TCCNGGA 1 cut(s) 2439
PkrI GCNGC 6 cut(s) 738, 963, 1039, 2013, 2083, 2800
Ple19I CGATCG 1 cut(s) 1088
PleI GAGTC 3 cut(s) 523, 1665, 2529
PmaCI CACGTG 1 cut(s) 1783
PmlI CACGTG 1 cut(s) 1783
PpsI GAGTC 3 cut(s) 523, 1665, 2529
Ppu21I YACGTR 1 cut(s) 1783
PpuMI RGGWCCY 1 cut(s) 1139
PscI ACATGT 1 cut(s) 273
PsiI TTATAA 1 cut(s) 1740
Psp124BI GAGCTC 2 cut(s) 346, 2251
Psp5II RGGWCCY 1 cut(s) 1139
Psp6I CCWGG 3 cut(s) 1884, 2329, 2439
PspCI CACGTG 1 cut(s) 1783
PspEI GGTNACC 1 cut(s) 1922
PspGI CCWGG 3 cut(s) 1884, 2329, 2439
PspN4I GGNNCC 6 cut(s) 630, 773, 1073, 1140, 1141, 1857
PspPI GGNCC 7 cut(s) 289, 523, 771, 1139, 1318, 1729, 1855
PspPPI RGGWCCY 1 cut(s) 1139
PstI CTGCAG 2 cut(s) 1699, 2016
PstNI CAGNNNCTG 1 cut(s) 2440
PsuI RGATCY 5 cut(s) 83, 628, 1078, 1621, 2674
PvuI CGATCG 1 cut(s) 1088
PvuII CAGCTG 1 cut(s) 1807
RsaI GTAC 5 cut(s) 268, 1447, 1509, 1895, 2709
RsaNI GTAC 5 cut(s) 267, 1446, 1508, 1894, 2708
RseI CAYNNNNRTG 3 cut(s) 443, 888, 2275
SacI GAGCTC 2 cut(s) 346, 2251
SalI GTCGAC 1 cut(s) 239
SaqAI TTAA 7 cut(s) 534, 803, 927, 1005, 1640, 2157, 2430
SatI GCNGC 6 cut(s) 737, 962, 1038, 2012, 2082, 2799
Sau96I GGNCC 7 cut(s) 289, 523, 771, 1139, 1318, 1729, 1855
SchI GAGTC 3 cut(s) 524, 1666, 2530
ScrFI CCNGG 6 cut(s) 1886, 1915, 1916, 1983, 2331, 2441
SduI GDGCHC 6 cut(s) 78, 346, 408, 656, 1351, 2251
SfcI CTRYAG 3 cut(s) 714, 1695, 2012
SinI GGWCC 4 cut(s) 523, 771, 1139, 1855
SmaI CCCGGG 1 cut(s) 1916
SmiMI CAYNNNNRTG 3 cut(s) 443, 888, 2275
SmlI CTYRAG 2 cut(s) 318, 731
SmoI CTYRAG 2 cut(s) 318, 731
SrfI GCCCGGGC 1 cut(s) 1916
SseBI AGGCCT 1 cut(s) 1772
SsiI CCGC 7 cut(s) 214, 464, 737, 2065, 2252, 2386, 2765
SspI AATATT 1 cut(s) 1177
SspMI CTAG 8 cut(s) 167, 284, 669, 1053, 1169, 1200, 1310, 2190
SstI GAGCTC 2 cut(s) 346, 2251
StuI AGGCCT 1 cut(s) 1772
StyD4I CCNGG 6 cut(s) 1884, 1913, 1914, 1981, 2329, 2439
StyI CCWWGG 4 cut(s) 1052, 1394, 1833, 2595
TaaI ACNGT 6 cut(s) 94, 266, 718, 1249, 1755, 2137
TaiI ACGT 4 cut(s) 358, 1746, 1785, 2642
TaqI TCGA 4 cut(s) 199, 240, 724, 2704
TatI WGTACW 2 cut(s) 1445, 2707
TauI GCSGC 1 cut(s) 739
TfiI GAWTC 7 cut(s) 181, 217, 563, 830, 2030, 2231, 2444
Tru1I TTAA 7 cut(s) 534, 803, 927, 1005, 1640, 2157, 2430
Tru9I TTAA 7 cut(s) 534, 803, 927, 1005, 1640, 2157, 2430
TscAI CASTG 7 cut(s) 18, 37, 99, 450, 533, 723, 2620
TseFI GTSAC 6 cut(s) 445, 816, 931, 1646, 1778, 1922
TseI GCWGC 5 cut(s) 961, 1037, 2011, 2081, 2798
Tsp45I GTSAC 6 cut(s) 445, 816, 931, 1646, 1778, 1922
TspGWI ACGGA 1 cut(s) 2672
TspMI CCCGGG 1 cut(s) 1914
TspRI CASTG 7 cut(s) 18, 37, 99, 450, 533, 723, 2620
VpaK11BI GGWCC 4 cut(s) 523, 771, 1139, 1855
XapI RAATTY 7 cut(s) 18, 1029, 2159, 2309, 2660, 2700, 2786
XceI RCATGY 3 cut(s) 277, 1900, 2634
XcmI CCANNNNNNNNNTGG 1 cut(s) 533
XmaI CCCGGG 1 cut(s) 1914
XmaJI CCTAGG 1 cut(s) 1052
XmiI GTMKAC 1 cut(s) 240
XmnI GAANNNNTTC 1 cut(s) 1828
XspI CTAG 8 cut(s) 167, 284, 669, 1053, 1169, 1200, 1310, 2190
Zsp2I ATGCAT 2 cut(s) 107, 1106
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.