Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0003224

Physical Location & Seq

Genomic Coordinates Forward (+)

27196930 .. 27206820

Gene Structure 9891 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G011510.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2577 bp

ATGCGGATTCTGGGTTGCAAAACACTTGTCGACTTTATAAATAGCCAGATTGATAGCACACACATGTTCAACCTAGAAGGCCTTATTCCTAAACTCTGTGAATTGGCTCAAGAAATGGGAGATGATGAAAGAGCTCTACGTCTACGTTCAGCTGGATTGCAATCACTGGCTTTTATGGTGTGGTTCATGGGTGAGCACTCTCATATCTCGATGGATTTTGACAATATCATATCAGTGACTTTGGAAAATTACACGAATATGCATACTAAACCTGGGAGTGTGAAAGAAGACGGACAATTTTCTGAATCTCAGCACCAGTGGGTTCAAGAAGCGCTAAAAGCAGAAGTTCATGATTCATCTTTTCCAGATGTTAGTCAGAAGGTTCCTTCATTACCAAACCTGAAACCCCTGATTTGGACCCCACAATGTTATGATACAGACAAGAGTCCGTCTTACTGGTCAAAGGTTTGCTTGCGTAATATAGCCAGATTGGCAAAGGAAGCTACAACAGTGCGTCGAGTGCTTGAACCCCTTTTCCAAAATTTTGATGCTGCAAACCATTGGTCCCCAGAAAAGCCACTTGCCTATTATGTTTTAATGTATCTGCAGTCACTATTAGAGGAATCAGGAGATAACTCTCATCTGTTATTATCCATATTGGTCAAGCACTTGGATCATAAGAATGTTGTCAAACAGCCTCGCTTGCAAACTGATATTGTAAATGTCACCACACAAATAGCACAAAGTGCAAAGCAGCAGGCATCAGTTGCGATTATTGGTGCAATATCTGACCTGACAAAGCATTTACGAAAATGCCTGCAAAATCAAGCTGAAGGGTCCAACCGTAGTAGTACAGATAAATGGAACCAAGATCTTCAGTCAGCACTAGAGAGATGCATCTCGCAACTGTCAAATAAGGTTGGAGATGTGGGGCCCATACTTGATATGATGGCTGTGGTGCTGGAGAATATCCCATCTAGTACTATTGTAGCTAGGGCGACGGTCTCTGCTGTTTATCTAACTGCAAAGATGGTCTCTTCTGTTCCAAACATATCCTATCACAAAAAGCCATTCCCTGATGCTCTGTTTCACCAGTTACTCCTAGCAATGGCCCACCTAGACCATGAAACACGTGTTGGAGCACACAGTATTTTCTCTATTGTTCTTGTGCCATCTCTACTTGTTCCTTGGCTACAGCAGAAAATGAACTCTGTGCAGACTGTTTCTGGGTTTTCATCTGTCAGTAGATTGGACTTTGGAAAGGATAAAAGAAAAGACATGGGAGCAACCGCGAATGGAGAGTTGAGGGAAGAGGAAAGTCAAATATCAGATGTTTGTGAAAATCAATCTGGCAGCTTCAAGAGTGCTTTGACGGGTGGAAGAGCAGAACTACCTTGCCTTCGGTTAAGCAGTCATCAAGTGAGTCTATTGCTTTCATTAATCTGGGTTCAGGCAACATCTGCAGAGAATACCCCAGCAAATTTTGAGGCGATGGCTCATTCTTATAATGTTGCTTTACTGTTTACCCGATCAAAGGCTTCAAGTCATATGGCTTTAGTAAGATGCTTCCAGTTGGCATTCTCCATCAGGACTATTTCCTTGGATCGAGATGGGGGTTTGCAAGAATCTCGTAGAAGGTCTCTTTATACGTTGGCATCATACATGCTTATATTTGCAGCCCGGGCGGGGAACTTCCCAGAGCTAATTCCCATTGTTAAAGCATCATTGATGGGTCAAATGGTTGATCCTCGTCTTCAGTTGGTTGACAATATCCGACTGCAGGCAGTTTCAATTGACTCCGATATGGAGAAGCTACCCTATGGATCACAGCCAGACGAAGTTGCTGCATTGAAGTCTCATTCAGCAATTGAACTAGATGACCAATTGTTGAAAGAAACCGTGATATCCCACTTCATGACTAAATTTTCCATATTGTCAGAGGATGAATTGTCTAGCATCAAGAAGCAACTCTTACTGGGTTTTACACCGGATGATGCATTTCCATTAGGAGCTCCACTATTCATGGAGACACCACGACCATGTTCTCCACTAGCCCATATAGATTTTGCTGATTTTGATGAGGTGATGCCTCCAGGTTCTTTGACAGATGAAGAAGCCTTCCCTGAACCTAGTGGAAGTCAGTCAGACCGCAAGACATCACTTTCCATCAACGCACTAGACATTTTAAATGTTAATCAGCTCCTGGATTCAGTTCTAGAAACGGCCCAACAAGTTGCAAGCTTCCCAGTCTCCACAATGCCCGTACCTTATGACCAAATGAAGAGCCAATGTGAAGCCCTTGTAACGGGCAAACAGCAAAAGATGGCAGTTCTTCATAGTTTCAAGCATCAACTAGAAACCAAGGCGTTAGTGCTCTCCAACGTAAATGAAAACAAATCCCATGCTTCACCACCCATGGGATTGGAATCTTCAGAAGGGTACCCAAAGGTCAAAACCGAGGAGCAAATTCAAGCGAAAAACCAGCTCGTCATATGTTCTCGTGAGTATGGACAGCATTCTTTTAAATTACCACCTTCAAGTCCTTATGACAAATTCTTGAAAGCTGCTGGATGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

858

Amino Acids

95.25

Weight (kDa)

5.92

Isoelectric Point (pI)

49.02

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003224)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05960 AT1G05960 AT1G05960 AT1G05960
fragaria_vesca	FvH4_4g10730 FvH4_4g10730 FvH4_4g10730 FvH4_4g10730 FvH4_4g10730 FvH4_4g10730 FvH4_4g10730 FvH4_4g10730 FvH4_4g10730 FvH4_4g10730 FvH4_4g10730 FvH4_4g10730
malus_domestica	MD04G1007900.v1.1
prunus_persica	Prupe.1G192000_v2.0.a1 Prupe.1G192000_v2.0.a1 Prupe.1G192000_v2.0.a1 Prupe.1G192000_v2.0.a1 Prupe.1G192000_v2.0.a1
pyrus_communis	pycom04g03470
rosa_chinensis	RchiOBHm_Chr4g0406851
rosa_laevigata	RLG00000008750
rosa_multiflora	Rmu_sc0008087.1_g000006
rosa_roxburghii	Rroxscaffold_5G00351630
rosa_rugosa	Rorug04G0074600 Rorug04G0074700 Rorug04G0074800 Rorug04G0074900 Rorug04G0075000 Rorug04G0075100
rosa_samantha	Rh4AG141400 Rh4CG148100 Rh4DG135200
rosa_wichuraiana	Rw4G011510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	38, 1506
Acc65I	GGTACC	1 cut(s)	2439
AccB1I	GGYRCC	1 cut(s)	2439
AccI	GTMKAC	2 cut(s)	30, 142
AccII	CGCG	1 cut(s)	1292
AciI	CCGC	4 cut(s)	4, 1290, 1685, 2149
AclWI	GGATC	4 cut(s)	681, 1611, 1739, 1831
AcsI	RAATTY	5 cut(s)	541, 1480, 1922, 2466, 2552
AcuI	CTGAAG	4 cut(s)	852, 860, 1739, 2415
AcvI	CACGTG	1 cut(s)	1133
AdeI	CACNNNGTG	1 cut(s)	746
AfaI	GTAC	4 cut(s)	853, 982, 2265, 2441
AfeI	AGCGCT	1 cut(s)	333
AfiI	CCNNNNNNNGG	7 cut(s)	414, 1108, 1534, 1686, 1780, 2305, 2417
AflIII	ACRYGT	3 cut(s)	63, 1130, 1132
AjnI	CCWGG	3 cut(s)	271, 2092, 2202
AjuI	GAANNNNNNNTTGG	2 cut(s)	1119, 1151
AloI	GAACNNNNNNTCC	2 cut(s)	519, 551
Alw21I	GWGCWC	5 cut(s)	136, 198, 1144, 2014, 2376
Alw26I	GTCTC	6 cut(s)	1009, 1039, 1644, 1860, 2021, 2254
AlwI	GGATC	4 cut(s)	681, 1611, 1739, 1831
AlwNI	CAGNNNCTG	1 cut(s)	2203
Ama87I	CYCGRG	1 cut(s)	1680
Aor51HI	AGCGCT	1 cut(s)	333
AoxI	GGCC	4 cut(s)	79, 932, 1110, 2223
ApaI	GGGCCC	1 cut(s)	936
ApeKI	GCWGC	6 cut(s)	551, 754, 1353, 1676, 1844, 2564
ApoI	RAATTY	5 cut(s)	541, 1480, 1922, 2466, 2552
ArsI	GACNNNNNNTTYG	4 cut(s)	12, 44, 548, 580
AseI	ATTAAT	1 cut(s)	1439
Asp718I	GGTACC	1 cut(s)	2439
AspLEI	GCGC	1 cut(s)	334
AspS9I	GGNCC	7 cut(s)	417, 564, 837, 932, 933, 1111, 2224
AsuC2I	CCSGG	2 cut(s)	1681, 1682
AsuHPI	GGTGA	5 cut(s)	203, 718, 1082, 2095, 2400
AvaI	CYCGRG	1 cut(s)	1680
AvaII	GGWCC	3 cut(s)	417, 564, 837
BaeGI	GKGCMC	1 cut(s)	936
BanI	GGYRCC	1 cut(s)	2439
BanII	GRGCYC	3 cut(s)	136, 936, 2014
BauI	CACGAG	1 cut(s)	2499
BbrPI	CACGTG	1 cut(s)	1133
BbsI	GAAGAC	2 cut(s)	294, 1745
Bbv12I	GWGCWC	5 cut(s)	136, 198, 1144, 2014, 2376
BbvI	GCAGC	6 cut(s)	538, 766, 1365, 1688, 1831, 2551
BceAI	ACGGC	1 cut(s)	2238
BcgI	CGANNNNNNTGC	4 cut(s)	1610, 1644, 1826, 1860
BciT130I	CCWGG	3 cut(s)	273, 2094, 2204
BcnI	CCSGG	2 cut(s)	1681, 1682
BcoDI	GTCTC	6 cut(s)	1009, 1039, 1644, 1860, 2021, 2254
BfmI	CTRYAG	4 cut(s)	605, 1193, 1461, 1778
BfoI	RGCGCY	1 cut(s)	335
BglI	GCCNNNNNGGC	1 cut(s)	491
BglII	AGATCT	1 cut(s)	871
BisI	GCNGC	6 cut(s)	552, 755, 1354, 1677, 1845, 2565
BlsI	GCNGC	6 cut(s)	553, 756, 1355, 1678, 1846, 2566
BmcAI	AGTACT	1 cut(s)	982
Bme1390I	CCNGG	5 cut(s)	273, 1681, 1682, 2094, 2204
Bme18I	GGWCC	3 cut(s)	417, 564, 837
BmeT110I	CYCGRG	1 cut(s)	1680
BmgT120I	GGNCC	7 cut(s)	417, 564, 837, 932, 933, 1111, 2224
BmiI	GGNNCC	8 cut(s)	384, 419, 566, 838, 866, 933, 934, 2441
BmrFI	CCNGG	5 cut(s)	273, 1681, 1682, 2094, 2204
BmrI	ACTGGG	2 cut(s)	1985, 2240
BmuI	ACTGGG	2 cut(s)	1985, 2240
BoxI	GACNNNNGTC	1 cut(s)	444
BpiI	GAAGAC	2 cut(s)	294, 1745
BpmI	CTGGAG	2 cut(s)	983, 2076
BpuEI	CTTGAG	1 cut(s)	93
BpuMI	CCSGG	2 cut(s)	1681, 1682
BsaAI	YACGTR	1 cut(s)	1133
BsaBI	GATNNNNATC	2 cut(s)	160, 2425
BsaI	GGTCTC	3 cut(s)	1009, 1039, 1644
BsaJI	CCNNGG	7 cut(s)	272, 1187, 1599, 1680, 2361, 2415, 2457
BsaWI	WCCGGW	1 cut(s)	1987
Bsc4I	CCNNNNNNNGG	7 cut(s)	414, 1108, 1534, 1686, 1780, 2305, 2417
Bse1I	ACTGG	7 cut(s)	171, 316, 461, 1093, 1570, 1980, 2246
Bse3DI	GCAATG	1 cut(s)	1113
Bse8I	GATNNNNATC	2 cut(s)	160, 2425
BseBI	CCWGG	3 cut(s)	273, 2094, 2204
BseDI	CCNNGG	7 cut(s)	272, 1187, 1599, 1680, 2361, 2415, 2457
BseGI	GGATG	3 cut(s)	1948, 1996, 2576
BseJI	GATNNNNATC	2 cut(s)	160, 2425
BseLI	CCNNNNNNNGG	7 cut(s)	414, 1108, 1534, 1686, 1780, 2305, 2417
BseMI	GCAATG	1 cut(s)	1113
BseMII	CTCAG	1 cut(s)	323
BseNI	ACTGG	7 cut(s)	171, 316, 461, 1093, 1570, 1980, 2246
BseRI	GAGGAG	1 cut(s)	2474
BseSI	GKGCMC	1 cut(s)	936
BseXI	GCAGC	6 cut(s)	538, 766, 1365, 1688, 1831, 2551
BseYI	CCCAGC	1 cut(s)	1474
BsgI	GTGCAG	1 cut(s)	1235
Bsh1236I	CGCG	1 cut(s)	1292
BshFI	GGCC	4 cut(s)	81, 934, 1112, 2225
BshNI	GGYRCC	1 cut(s)	2439
BsiHKAI	GWGCWC	5 cut(s)	136, 198, 1144, 2014, 2376
BsiHKCI	CYCGRG	1 cut(s)	1680
BsiSI	CCGG	2 cut(s)	1681, 1988
BslFI	GGGAC	1 cut(s)	550
BslI	CCNNNNNNNGG	7 cut(s)	414, 1108, 1534, 1686, 1780, 2305, 2417
BsmAI	GTCTC	6 cut(s)	1009, 1039, 1644, 1860, 2021, 2254
BsmFI	GGGAC	1 cut(s)	550
BsmI	GAATGC	2 cut(s)	1577, 2515
BsnI	GGCC	4 cut(s)	81, 934, 1112, 2225
Bso31I	GGTCTC	3 cut(s)	1009, 1039, 1644
BsoBI	CYCGRG	1 cut(s)	1680
Bsp120I	GGGCCC	1 cut(s)	932
Bsp1286I	GDGCHC	6 cut(s)	136, 198, 936, 1144, 2014, 2376
Bsp143I	GATC	6 cut(s)	673, 871, 1529, 1603, 1744, 1823
Bsp19I	CCATGG	1 cut(s)	2415
BspACI	CCGC	4 cut(s)	4, 1290, 1685, 2149
BspANI	GGCC	4 cut(s)	81, 934, 1112, 2225
BspCNI	CTCAG	1 cut(s)	322
BspFNI	CGCG	1 cut(s)	1292
BspHI	TCATGA	2 cut(s)	349, 1914
BspLI	GGNNCC	8 cut(s)	384, 419, 566, 838, 866, 933, 934, 2441
BspMAI	CTGCAG	3 cut(s)	609, 1465, 1782
BspPI	GGATC	4 cut(s)	681, 1611, 1739, 1831
BspQI	GCTCTTC	2 cut(s)	1375, 2276
BspT107I	GGYRCC	1 cut(s)	2439
BspTNI	GGTCTC	3 cut(s)	1009, 1039, 1644
BsrDI	GCAATG	1 cut(s)	1113
BsrI	ACTGG	7 cut(s)	171, 316, 461, 1093, 1570, 1980, 2246
BssECI	CCNNGG	7 cut(s)	272, 1187, 1599, 1680, 2361, 2415, 2457
BssMI	GATC	6 cut(s)	673, 871, 1529, 1603, 1744, 1823
BssSI	CACGAG	1 cut(s)	2499
BssT1I	CCWWGG	4 cut(s)	1187, 1599, 2361, 2415
Bst2BI	CACGAG	1 cut(s)	2499
Bst2UI	CCWGG	3 cut(s)	273, 2094, 2204
Bst4CI	ACNGT	8 cut(s)	511, 845, 909, 1003, 1148, 1222, 1521, 1900
Bst6I	CTCTTC	4 cut(s)	1042, 1305, 1375, 2276
BstAPI	GCANNNNNTGC	3 cut(s)	746, 767, 1460
BstBAI	YACGTR	1 cut(s)	1133
BstC8I	GCNNGC	6 cut(s)	473, 704, 759, 818, 1782, 2239
BstDEI	CTNAG	1 cut(s)	309
BstDSI	CCRYGG	1 cut(s)	2415
BstF5I	GGATG	3 cut(s)	1948, 1996, 2576
BstFNI	CGCG	1 cut(s)	1292
BstH2I	RGCGCY	1 cut(s)	335
BstHHI	GCGC	1 cut(s)	334
BstKTI	GATC	6 cut(s)	676, 874, 1532, 1606, 1747, 1826
BstMAI	GTCTC	6 cut(s)	1009, 1039, 1644, 1860, 2021, 2254
BstMBI	GATC	6 cut(s)	673, 871, 1529, 1603, 1744, 1823
BstMWI	GCNNNNNNNGC	9 cut(s)	338, 491, 500, 520, 703, 746, 767, 1460, 1682
BstNI	CCWGG	3 cut(s)	273, 2094, 2204
BstNSI	RCATGY	2 cut(s)	67, 1666
BstPAI	GACNNNNGTC	1 cut(s)	444
BstSCI	CCNGG	5 cut(s)	271, 1679, 1680, 2092, 2202
BstSFI	CTRYAG	4 cut(s)	605, 1193, 1461, 1778
BstSLI	GKGCMC	1 cut(s)	936
BstUI	CGCG	1 cut(s)	1292
BstV1I	GCAGC	6 cut(s)	538, 766, 1365, 1688, 1831, 2551
BstV2I	GAAGAC	2 cut(s)	294, 1745
BstX2I	RGATCY	1 cut(s)	871
BstXI	CCANNNNNNTGG	1 cut(s)	2422
BstYI	RGATCY	1 cut(s)	871
BsuRI	GGCC	4 cut(s)	81, 934, 1112, 2225
BtgI	CCRYGG	1 cut(s)	2415
BtgZI	GCGATG	1 cut(s)	1505
BtsCI	GGATG	3 cut(s)	1948, 1996, 2576
BtsIMutI	CAGTG	4 cut(s)	164, 240, 323, 516
Cac8I	GCNNGC	6 cut(s)	473, 704, 759, 818, 1782, 2239
CaiI	CAGNNNCTG	1 cut(s)	2203
CciI	TCATGA	2 cut(s)	349, 1914
CfoI	GCGC	1 cut(s)	334
Cfr13I	GGNCC	7 cut(s)	417, 564, 837, 932, 933, 1111, 2224
Cfr9I	CCCGGG	1 cut(s)	1680
CseI	GACGC	1 cut(s)	503
Csp6I	GTAC	4 cut(s)	852, 981, 2264, 2440
CviQI	GTAC	4 cut(s)	852, 981, 2264, 2440
DdeI	CTNAG	1 cut(s)	309
DpnI	GATC	6 cut(s)	675, 873, 1531, 1605, 1746, 1825
DpnII	GATC	6 cut(s)	673, 871, 1529, 1603, 1744, 1823
DraI	TTTAAA	2 cut(s)	2187, 2524
DraIII	CACNNNGTG	1 cut(s)	746
Eam1104I	CTCTTC	4 cut(s)	1042, 1305, 1375, 2276
EarI	CTCTTC	4 cut(s)	1042, 1305, 1375, 2276
Ecl136II	GAGCTC	2 cut(s)	134, 2012
Eco130I	CCWWGG	4 cut(s)	1187, 1599, 2361, 2415
Eco147I	AGGCCT	1 cut(s)	81
Eco24I	GRGCYC	3 cut(s)	136, 936, 2014
Eco31I	GGTCTC	3 cut(s)	1009, 1039, 1644
Eco32I	GATATC	1 cut(s)	1905
Eco47I	GGWCC	3 cut(s)	417, 564, 837
Eco47III	AGCGCT	1 cut(s)	333
Eco53kI	GAGCTC	2 cut(s)	134, 2012
Eco57I	CTGAAG	4 cut(s)	852, 860, 1739, 2415
Eco72I	CACGTG	1 cut(s)	1133
Eco88I	CYCGRG	1 cut(s)	1680
EcoICRI	GAGCTC	2 cut(s)	134, 2012
EcoO109I	RGGNCCY	1 cut(s)	932
EcoRII	CCWGG	3 cut(s)	271, 2092, 2202
EcoRV	GATATC	1 cut(s)	1905
EcoT14I	CCWWGG	4 cut(s)	1187, 1599, 2361, 2415
EcoT22I	ATGCAT	3 cut(s)	264, 899, 1999
EcoT38I	GRGCYC	3 cut(s)	136, 936, 2014
ErhI	CCWWGG	4 cut(s)	1187, 1599, 2361, 2415
FalI	AAGNNNNNCTT	4 cut(s)	455, 487, 1955, 1987
FaqI	GGGAC	1 cut(s)	550
FauI	CCCGC	1 cut(s)	1678
FauNDI	CATATG	2 cut(s)	1548, 2492
FblI	GTMKAC	2 cut(s)	30, 142
Fnu4HI	GCNGC	6 cut(s)	552, 755, 1354, 1677, 1845, 2565
FokI	GGATG	2 cut(s)	1955, 2003
FriOI	GRGCYC	3 cut(s)	136, 936, 2014
Fsp4HI	GCNGC	6 cut(s)	552, 755, 1354, 1677, 1845, 2565
GlaI	GCGC	1 cut(s)	333
GluI	GCNGC	6 cut(s)	552, 755, 1354, 1677, 1845, 2565
GsaI	CCCAGC	1 cut(s)	1478
GsuI	CTGGAG	2 cut(s)	983, 2076
HaeII	RGCGCY	1 cut(s)	335
HaeIII	GGCC	4 cut(s)	81, 934, 1112, 2225
HapII	CCGG	2 cut(s)	1681, 1988
HgaI	GACGC	1 cut(s)	503
HhaI	GCGC	1 cut(s)	334
Hin6I	GCGC	1 cut(s)	332
HinP1I	GCGC	1 cut(s)	332
HincII	GTYRAC	2 cut(s)	31, 1765
HindII	GTYRAC	2 cut(s)	31, 1765
HindIII	AAGCTT	1 cut(s)	2239
HpaII	CCGG	2 cut(s)	1681, 1988
HphI	GGTGA	5 cut(s)	203, 718, 1082, 2095, 2400
Hpy166II	GTNNAC	4 cut(s)	31, 143, 1524, 1765
Hpy188I	TCNGA	9 cut(s)	304, 378, 790, 1330, 1775, 1801, 1939, 2146, 2434
Hpy8I	GTNNAC	4 cut(s)	31, 143, 1524, 1765
Hpy99I	CGWCG	2 cut(s)	519, 1003
HpyAV	CCTTC	9 cut(s)	71, 373, 396, 827, 1409, 1629, 2128, 2429, 2544
HpyCH4III	ACNGT	8 cut(s)	511, 845, 909, 1003, 1148, 1222, 1521, 1900
HpyCH4IV	ACGT	5 cut(s)	139, 145, 1132, 1649, 2382
HpyF10VI	GCNNNNNNNGC	9 cut(s)	338, 491, 500, 520, 703, 746, 767, 1460, 1682
HpyF3I	CTNAG	1 cut(s)	309
HpySE526I	ACGT	5 cut(s)	139, 145, 1132, 1649, 2382
HspAI	GCGC	1 cut(s)	332
KpnI	GGTACC	1 cut(s)	2443
Kzo9I	GATC	6 cut(s)	673, 871, 1529, 1603, 1744, 1823
LguI	GCTCTTC	2 cut(s)	1375, 2276
LmnI	GCTCC	6 cut(s)	1139, 1283, 2009, 2017, 2205, 2461
Lsp1109I	GCAGC	6 cut(s)	538, 766, 1365, 1688, 1831, 2551
MaeII	ACGT	5 cut(s)	139, 145, 1132, 1649, 2382
MaeIII	GTNAC	5 cut(s)	235, 609, 724, 1095, 2302
MalI	GATC	6 cut(s)	675, 873, 1531, 1605, 1746, 1825
MboI	GATC	6 cut(s)	673, 871, 1529, 1603, 1744, 1823
MfeI	CAATTG	3 cut(s)	1791, 1866, 1883
MflI	RGATCY	1 cut(s)	871
MhlI	GDGCHC	6 cut(s)	136, 198, 936, 1144, 2014, 2376
MlyI	GAGTC	3 cut(s)	454, 1432, 1790
MmeI	TCCRAC	5 cut(s)	864, 901, 1117, 1798, 2403
Mph1103I	ATGCAT	3 cut(s)	264, 899, 1999
MseI	TTAA	8 cut(s)	596, 1406, 1439, 1716, 2186, 2193, 2523, 2575
MslI	CAYNNNNRTG	5 cut(s)	62, 233, 257, 681, 2038
MspA1I	CMGCKG	1 cut(s)	152
MspI	CCGG	2 cut(s)	1681, 1988
MspR9I	CCNGG	5 cut(s)	273, 1681, 1682, 2094, 2204
MunI	CAATTG	3 cut(s)	1791, 1866, 1883
Mva1269I	GAATGC	2 cut(s)	1577, 2515
MvaI	CCWGG	3 cut(s)	273, 2094, 2204
MvnI	CGCG	1 cut(s)	1292
MwoI	GCNNNNNNNGC	9 cut(s)	338, 491, 500, 520, 703, 746, 767, 1460, 1682
NciI	CCSGG	2 cut(s)	1681, 1682
NcoI	CCATGG	1 cut(s)	2415
NdeI	CATATG	2 cut(s)	1548, 2492
NdeII	GATC	6 cut(s)	673, 871, 1529, 1603, 1744, 1823
NlaIV	GGNNCC	8 cut(s)	384, 419, 566, 838, 866, 933, 934, 2441
NmuCI	GTSAC	3 cut(s)	235, 609, 724
NsiI	ATGCAT	3 cut(s)	264, 899, 1999
NspI	RCATGY	2 cut(s)	67, 1666
PagI	TCATGA	2 cut(s)	349, 1914
PceI	AGGCCT	1 cut(s)	81
PciI	ACATGT	1 cut(s)	63
PciSI	GCTCTTC	2 cut(s)	1375, 2276
PctI	GAATGC	2 cut(s)	1577, 2515
PfeI	GAWTC	7 cut(s)	7, 305, 353, 623, 1625, 2207, 2426
PfoI	TCCNGGA	1 cut(s)	2202
PkrI	GCNGC	6 cut(s)	553, 756, 1355, 1678, 1846, 2566
PleI	GAGTC	3 cut(s)	453, 1431, 1790
PmaCI	CACGTG	1 cut(s)	1133
PmlI	CACGTG	1 cut(s)	1133
PpsI	GAGTC	3 cut(s)	453, 1431, 1790
Ppu21I	YACGTR	1 cut(s)	1133
PscI	ACATGT	1 cut(s)	63
PshAI	GACNNNNGTC	1 cut(s)	444
PshBI	ATTAAT	1 cut(s)	1439
PsiI	TTATAA	2 cut(s)	38, 1506
Psp124BI	GAGCTC	2 cut(s)	136, 2014
Psp6I	CCWGG	3 cut(s)	271, 2092, 2202
PspCI	CACGTG	1 cut(s)	1133
PspFI	CCCAGC	1 cut(s)	1474
PspGI	CCWGG	3 cut(s)	271, 2092, 2202
PspN4I	GGNNCC	8 cut(s)	384, 419, 566, 838, 866, 933, 934, 2441
PspOMI	GGGCCC	1 cut(s)	932
PspPI	GGNCC	7 cut(s)	417, 564, 837, 932, 933, 1111, 2224
PstI	CTGCAG	3 cut(s)	609, 1465, 1782
PstNI	CAGNNNCTG	1 cut(s)	2203
PsuI	RGATCY	1 cut(s)	871
PvuII	CAGCTG	1 cut(s)	152
RsaI	GTAC	4 cut(s)	853, 982, 2265, 2441
RsaNI	GTAC	4 cut(s)	852, 981, 2264, 2440
RseI	CAYNNNNRTG	5 cut(s)	62, 233, 257, 681, 2038
SacI	GAGCTC	2 cut(s)	136, 2014
SalI	GTCGAC	1 cut(s)	29
SapI	GCTCTTC	2 cut(s)	1375, 2276
SaqAI	TTAA	8 cut(s)	596, 1406, 1439, 1716, 2186, 2193, 2523, 2575
SatI	GCNGC	6 cut(s)	552, 755, 1354, 1677, 1845, 2565
Sau3AI	GATC	6 cut(s)	673, 871, 1529, 1603, 1744, 1823
Sau96I	GGNCC	7 cut(s)	417, 564, 837, 932, 933, 1111, 2224
ScaI	AGTACT	1 cut(s)	982
SchI	GAGTC	3 cut(s)	454, 1432, 1790
ScrFI	CCNGG	5 cut(s)	273, 1681, 1682, 2094, 2204
SduI	GDGCHC	6 cut(s)	136, 198, 936, 1144, 2014, 2376
SfcI	CTRYAG	4 cut(s)	605, 1193, 1461, 1778
SinI	GGWCC	3 cut(s)	417, 564, 837
SmaI	CCCGGG	1 cut(s)	1682
SmiMI	CAYNNNNRTG	5 cut(s)	62, 233, 257, 681, 2038
SmlI	CTYRAG	1 cut(s)	108
SmoI	CTYRAG	1 cut(s)	108
SrfI	GCCCGGGC	1 cut(s)	1682
SseBI	AGGCCT	1 cut(s)	81
SsiI	CCGC	4 cut(s)	4, 1290, 1685, 2149
SstI	GAGCTC	2 cut(s)	136, 2014
StuI	AGGCCT	1 cut(s)	81
StyD4I	CCNGG	5 cut(s)	271, 1679, 1680, 2092, 2202
StyI	CCWWGG	4 cut(s)	1187, 1599, 2361, 2415
TaaI	ACNGT	8 cut(s)	511, 845, 909, 1003, 1148, 1222, 1521, 1900
TaiI	ACGT	5 cut(s)	142, 148, 1135, 1652, 2385
TaqI	TCGA	4 cut(s)	30, 209, 517, 1606
TatI	WGTACW	2 cut(s)	851, 980
TfiI	GAWTC	7 cut(s)	7, 305, 353, 623, 1625, 2207, 2426
Tru1I	TTAA	8 cut(s)	596, 1406, 1439, 1716, 2186, 2193, 2523, 2575
Tru9I	TTAA	8 cut(s)	596, 1406, 1439, 1716, 2186, 2193, 2523, 2575
TscAI	CASTG	4 cut(s)	171, 240, 323, 516
TseFI	GTSAC	3 cut(s)	235, 609, 724
TseI	GCWGC	6 cut(s)	551, 754, 1353, 1676, 1844, 2564
Tsp45I	GTSAC	3 cut(s)	235, 609, 724
TspGWI	ACGGA	2 cut(s)	306, 438
TspMI	CCCGGG	1 cut(s)	1680
TspRI	CASTG	4 cut(s)	171, 240, 323, 516
VpaK11BI	GGWCC	3 cut(s)	417, 564, 837
VspI	ATTAAT	1 cut(s)	1439
XapI	RAATTY	5 cut(s)	541, 1480, 1922, 2466, 2552
XbaI	TCTAGA	1 cut(s)	2215
XceI	RCATGY	2 cut(s)	67, 1666
XmaI	CCCGGG	1 cut(s)	1680
XmiI	GTMKAC	2 cut(s)	30, 142
ZrmI	AGTACT	1 cut(s)	982
Zsp2I	ATGCAT	3 cut(s)	264, 899, 1999

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.