Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003234

Physical Location & Seq

Genomic Coordinates Reverse (-)

2055745 .. 2060429

Gene Structure 4685 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G06710.19

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2994 bp

ATGAACAAAACAGTCGTAAGATGTCTTCTTTCTCGTTCACACCATCCTTTGATTCATTTCTCCACCAATTTATCTCTTCTCCACAGAGTTTTCACCTGTAGCCGTTATCTCACTGCTAGGTTTATGTCCACTCCTCCGCCGGATGACATGTTTGGTTTCGACGATCCTTTCTCCCCCAGTGATTCGCGGGAAGTTGTGGATTTGACTAAAGAGTACTCCTTTTTGCACGATTCTCTTGTCGACTATGGAAACGTTAATGTTCATCAAGTAGTGCCCATTATTACTCAATCCTCTATTGACGCTAGAGCCATTGCAGATGCTGTTTCTGGTGTCGACGATGTGTTTGGGAGAAAATCCCAGAAGTTTCTTAGGCAATTTAGAGAGAAATTGAGTGAGAGTTTAGTGATTGAGGTGTTGCGTTTGATAGCAAGACCATCTGCTGTTATCAGTTTCTTCGTTTGGGCAGGTAGGCAGATAGGTTATAAGCATACTGCACCTGTGTATAACGCTTTGGTTGACCTTATTGTACGTGATGATGACGAAAAAGTTCCCGAAGAATTCCTGCAACAGATTAGAGATGATGATAAGGAAGTGTTTGGCGAATTTCTCAATGTGTTGGTAAGGAAACATTGCAGGAATGGGTCATTTAGTATTGCGCTTGAGGAGTTAGGGAGGCTCAAGGATTTTAGGTTCAGACCTTCAAGATCGACTTATAATTGTTTGATTCAGGCATTTCTCAAGGCTGATCGTTTGGACTCTGCATCTTTGATTCATAGGGAAATGTCTCTTGCAAATCTTAGGATGGATGGGTTTACACTTAGATGCTTTGCTTATTCTCTCTGTAAAGTAGGAAAGTGGAGGGAAGCTCTAACATTGGTGGAAACGGAAAATTTTGTGCCTGATACTGTGTTTTATACAAAATTGATATCTGGTCTGTGTGAAGCTTCGCTTTTTGAAGAGGCTATGGATTTCCTGAATAGGATGCGTGCTACTTCCTGCCTTCCAAATGTTGTTACATATTCAACTTTGCTGTGTGGATGCTTGAACAAAAAACAGCTGGGTAGGTGTAAAAGGGTGCTTAATATGATGATGATGGAAGGTTGTTATCCAAGTCCCAAGATTTTTAATTCTCTTGTACATGCTTATTGCACATCAGGAGATCATTCATATGCATACAAATTGCTCAAAAAAATGGTTAAATGTGGTCACATGCCAGGATATGTTGTCTACAATATATTGATTGGGAGTATTTGTGGTGACAAAGACTCCCTTAATTGTGATCTGTTGGACTTAGCTGAGAAAGCTTATAGTGAAATGCTTGCTGCAGGGGTTGTTCTGAATAAGATTAATGTCAGTAGCTTCACACGGTGTCTTTGTAGTGCTGGGAAATATGAAAAGGCATTTAGTGTTATCCGTGAAATGATTGGTCAGGGATTTATACCAGATACCAGTACCTATTCCAAAGTCCTTAATTATTTATGTAATGCTTCGAAAATGGAGTTGGCGTTTTTGTTATTTGAAGAAATGAAAAGGGGTGGCCTTGTTGCTGATGTCTACACGTATACTATTATGGTAGATAGTTTCTGTAAAGCTGGTCTAATTGAACAGGCTCGTAAGTGGTTCAATGAAATGAGAGAGGTTGGTTGTACACCTAACGTCGTCACATATACCGCTCTTATCCATGCTTATCTTAAGGCTAAGAAGGTCAGCTATGCAAATGAGCTGTTTGAAACGATGCTGTCTGAAGGGTGTCTCCCTAATATTGTTACATATTCTGCCTTAATTGATGGCCATTGCAAAGCTGGACAAGTGGAGAAAGCCTGCCAGATTTTTGAAAGAATGTGTGGCAGCAAAGATGTCCCAGATGTAGATATGTACTTCAAGCAGTATGATGACAACAGCGAGAGGCCAAATGTAGTTACATATGGAGCTTTACTGGATGGTTTCTGCAAGTCGCATAGGGTCGAAGAAGCTCGTAAGTTGTTGGATGCTATGTCTATGGAAGGTTGTGAACCGAATCAGATTGTATATGATGCTCTCATTGATGGACTCTGTAAGGTTGGGAAACTAGACGAAGCACAAGAAGTGAAAACTGAGATGTCTGAGCATGGATTCCCTGCAACCTTATATACTTACAGTTCTCTAATTGATCGTTATTTCAAAGTCAAGCGCCAAGATTTAGCCTCAAAAGTATTATCTAAGATGCTTGAGAATTCCTGTGCGCCCAATGTGGTTATATACACTGAGATGATTGATGGCTTATGCAAGGTTGGTAAAACTGATGAAGCTTATAAGCTTATGCAAATGATGGAAGAAAAAGGGTGTCAGCCCAATGTTGTGACATATACAGCGATGATTGATGGATTTGGAATGATTGGTAAAATAGAAACATGCCTTGAGCTCTTAGAGCGAATGGGTTCCAAAGGTGTTGCTCCAAATTATGTTACTTACAGGGTCTTGATAGATCATTGTTGCAAAAATGGTGCACTGGATGTGGCCCACAATCTTCTCGAAGAAATGAAACAGACACATTGGCCTACACACACAGCAGGATATCGCAAAGTCATTGAAGGATTCAATAAAGAGTTCATAGAGTCTCTAGGGCTTCTCGATGAGATAGGCCAGGATGATACTGCCCCTTTTCTTTCTGTATATAGGCTTTTGATTGATAATCTTATTAAAGCTCAAAGACTGGAAATGGCTCTTAGGCTTCTTGAAGAGGTTGCAACATTTTCAGCCACGTTGGTTGACTACAGTAGCACATATAACTCACTGATTGAAAGCCTTTGCCTTGCTAATAAAGTGGAAACGGCTTTTCAGTTGTTCTCAGAAATGACAAAGAAAGGTGTCATTCCGGAGATGCAATCATTCTGTAGTCTAATCAAGGGACTTTTCCGAAACAGCAAGATCAGTGAAGCACTATTGCTTCTAGATTTCATATCTCATATGGAAATTCAGTGGATAGAAGAAAAGAAAACATCTGATGGGACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

997

Amino Acids

112.77

Weight (kDa)

5.98

Isoelectric Point (pI)

33.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_1	PF12854	297 - 329	1.6e-06	PPR repeat
PPR_2	PF13041	300 - 348	1.7e-13	PPR repeat family
PPR_2	PF13041	374 - 418	1.1e-07	PPR repeat family
PPR_long	PF17177	410 - 531	4.1e-07	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	457 - 495	6.7e-07	PPR repeat family
PPR_2	PF13041	481 - 530	8.9e-16	PPR repeat family
TPR_24	PF23276	488 - 613	2.6e-08	Fungal tetratrico peptide repeats
PPR_long	PF17177	502 - 617	2.2e-09	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	505 - 559	2.9e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	513 - 545	4.7e-10	PPR repeat
PPR	PF01535	519 - 549	2.8e-08	PPR repeat
PPR_2	PF13041	524 - 562	4.8e-11	PPR repeat family
PPR_1	PF12854	548 - 579	7.9e-07	PPR repeat
PPR_3	PF13812	551 - 596	7.5e-12	Pentatricopeptide repeat domain
PPR_2	PF13041	551 - 600	2.2e-17	PPR repeat family
PPR	PF01535	554 - 584	6.7e-06	PPR repeat
PPR_1	PF12854	583 - 614	2.7e-13	PPR repeat
PPR_2	PF13041	586 - 623	8.6e-09	PPR repeat family
PPR	PF01535	589 - 616	8e-08	PPR repeat
PPR_2	PF13041	637 - 686	4.7e-15	PPR repeat family
PPR_1	PF12854	637 - 665	2.9e-09	PPR repeat
PPR	PF01535	640 - 670	9.5e-06	PPR repeat
PPR_1	PF12854	669 - 701	4.5e-11	PPR repeat
PPR_2	PF13041	672 - 720	2.5e-11	PPR repeat family
PPR_3	PF13812	696 - 751	1.4e-09	Pentatricopeptide repeat domain
PPR_long	PF17177	729 - 851	1.5e-09	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	739 - 771	7e-10	PPR repeat
PPR_3	PF13812	742 - 790	1.1e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	742 - 789	1.9e-18	PPR repeat family
PPR	PF01535	745 - 775	4.4e-07	PPR repeat
PPR_1	PF12854	773 - 805	1.4e-07	PPR repeat
PPR_2	PF13041	777 - 826	2e-14	PPR repeat family
PPR	PF01535	780 - 810	2.9e-06	PPR repeat
PPR_1	PF12854	808 - 841	5.9e-08	PPR repeat
PPR_2	PF13041	812 - 844	1.8e-06	PPR repeat family
PPR	PF01535	920 - 950	7.3e-07	PPR repeat
PPR_2	PF13041	920 - 965	5.9e-12	PPR repeat family
PPR_1	PF12854	921 - 946	1.1e-08	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0003234)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06710 AT1G06710 AT1G06710 AT1G06710 AT1G06710 AT1G06710 AT1G06710 AT1G06710 AT1G06710 AT1G06710 AT1G06710 AT1G06710 AT1G06710 AT1G06710 AT1G06710 AT1G06710 AT1G06710 AT1G06710 AT1G06710
fragaria_vesca	FvH4_4g11500
malus_domestica	MD04G1034700.v1.1
prunus_persica	Prupe.1G186300_v2.0.a1
pyrus_communis	pycom04g02410 pycom04g02880
rosa_chinensis	RchiOBHm_Chr4g0408411
rosa_laevigata	RLG00000008653
rosa_multiflora	Rmu_ssc0000173.1_g000003
rosa_roxburghii	Rroxscaffold_5G00352870
rosa_rugosa	Rorug04G0085100 Rorug04G0085200 Rorug04G0085300 Rorug04G0085400
rosa_samantha	Rh4AG150300 Rh4BG147200 Rh4CG157600 Rh4DG143200
rosa_wichuraiana	Rw4G012270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	483, 714, 2292
Acc36I	ACCTGC	1 cut(s)	455
AccBSI	CCGCTC	1 cut(s)	1673
AccI	GTMKAC	5 cut(s)	240, 333, 1227, 1554, 1562
AccII	CGCG	1 cut(s)	187
AccIII	TCCGGA	1 cut(s)	2854
AciI	CCGC	3 cut(s)	137, 187, 1671
AclI	AACGTT	1 cut(s)	252
AclWI	GGATC	1 cut(s)	158
AcoI	YGGCCR	1 cut(s)	1789
AcsI	RAATTY	5 cut(s)	557, 602, 889, 2212, 2952
AcuI	CTGAAG	1 cut(s)	1764
AdeI	CACNNNGTG	1 cut(s)	1368
AfaI	GTAC	6 cut(s)	215, 528, 1137, 1453, 1648, 1877
AflII	CTTAAG	1 cut(s)	1691
AflIII	ACRYGT	2 cut(s)	147, 1557
AjnI	CCWGG	2 cut(s)	1213, 2622
AjuI	GAANNNNNNNTTGG	2 cut(s)	1484, 1516
AloI	GAACNNNNNNTCC	2 cut(s)	674, 706
Alw21I	GWGCWC	2 cut(s)	2403, 2488
Alw26I	GTCTC	3 cut(s)	789, 1757, 2601
Alw44I	GTGCAC	1 cut(s)	2484
AlwI	GGATC	1 cut(s)	158
AlwNI	CAGNNNCTG	1 cut(s)	320
Aor13HI	TCCGGA	1 cut(s)	2854
AoxI	GGCC	6 cut(s)	1537, 1789, 1907, 2496, 2534, 2620
ApaLI	GTGCAC	1 cut(s)	2484
ApeKI	GCWGC	2 cut(s)	1322, 1848
ApoI	RAATTY	5 cut(s)	557, 602, 889, 2212, 2952
ArsI	GACNNNNNNTTYG	2 cut(s)	326, 358
AseI	ATTAAT	1 cut(s)	1347
Asp700I	GAANNNNTTC	2 cut(s)	546, 2416
AspLEI	GCGC	3 cut(s)	658, 2172, 2224
AspS9I	GGNCC	1 cut(s)	2497
AsuHPI	GGTGA	2 cut(s)	85, 1268
AsuII	TTCGAA	1 cut(s)	1490
BaeGI	GKGCMC	2 cut(s)	276, 2488
BalI	TGGCCA	1 cut(s)	1791
BanII	GRGCYC	1 cut(s)	2403
BarI	GAAGNNNNNNTAC	2 cut(s)	9, 41
BbsI	GAAGAC	1 cut(s)	17
Bbv12I	GWGCWC	2 cut(s)	2403, 2488
BbvI	GCAGC	2 cut(s)	1309, 1860
BceAI	ACGGC	2 cut(s)	87, 2826
BciT130I	CCWGG	2 cut(s)	1215, 2624
BcoDI	GTCTC	3 cut(s)	789, 1757, 2601
BfaI	CTAG	5 cut(s)	117, 303, 2069, 2600, 2930
BfmI	CTRYAG	4 cut(s)	97, 1323, 2752, 2872
BfoI	RGCGCY	1 cut(s)	2173
BfrI	CTTAAG	1 cut(s)	1691
BfuAI	ACCTGC	1 cut(s)	455
BisI	GCNGC	2 cut(s)	1323, 1849
BlsI	GCNGC	2 cut(s)	1324, 1850
BmcAI	AGTACT	1 cut(s)	215
Bme1390I	CCNGG	2 cut(s)	1215, 2624
BmgT120I	GGNCC	1 cut(s)	2497
BmiI	GGNNCC	1 cut(s)	2419
BmrFI	CCNGG	2 cut(s)	1215, 2624
BmrI	ACTGGG	1 cut(s)	171
BmuI	ACTGGG	1 cut(s)	171
BpiI	GAAGAC	1 cut(s)	17
BplI	GAGNNNNNCTC	2 cut(s)	850, 882
Bpu14I	TTCGAA	1 cut(s)	1490
BpuEI	CTTGAG	5 cut(s)	662, 680, 722, 2228, 2417
BsaAI	YACGTR	2 cut(s)	530, 1560
BsaWI	WCCGGW	1 cut(s)	2854
BsaXI	ACNNNNNCTCC	6 cut(s)	1237, 1250, 1267, 1280, 1490, 1520
Bse1I	ACTGG	5 cut(s)	177, 1449, 1941, 2493, 2697
Bse3DI	GCAATG	3 cut(s)	309, 628, 1792
BseAI	TCCGGA	1 cut(s)	2854
BseBI	CCWGG	2 cut(s)	1215, 2624
BseMI	GCAATG	3 cut(s)	309, 628, 1792
BseMII	CTCAG	5 cut(s)	1287, 2085, 2094, 2235, 2841
BseNI	ACTGG	5 cut(s)	177, 1449, 1941, 2493, 2697
BseRI	GAGGAG	2 cut(s)	123, 677
BseSI	GKGCMC	2 cut(s)	276, 2488
BseXI	GCAGC	2 cut(s)	1309, 1860
BseYI	CCCAGC	2 cut(s)	1057, 1382
BsgI	GTGCAG	1 cut(s)	477
Bsh1236I	CGCG	1 cut(s)	187
BshFI	GGCC	6 cut(s)	1539, 1791, 1909, 2498, 2536, 2622
BsiHKAI	GWGCWC	2 cut(s)	2403, 2488
BsiSI	CCGG	2 cut(s)	140, 2855
BslFI	GGGAC	3 cut(s)	1098, 1844, 2901
BsmAI	GTCTC	3 cut(s)	789, 1757, 2601
BsmFI	GGGAC	3 cut(s)	1098, 1844, 2901
BsnI	GGCC	6 cut(s)	1539, 1791, 1909, 2498, 2536, 2622
Bsp119I	TTCGAA	1 cut(s)	1490
Bsp1286I	GDGCHC	3 cut(s)	276, 2403, 2488
Bsp13I	TCCGGA	1 cut(s)	2854
Bsp1407I	TGTACA	2 cut(s)	1135, 1646
Bsp143I	GATC	8 cut(s)	163, 704, 745, 1159, 1279, 2149, 2464, 2907
BspACI	CCGC	3 cut(s)	137, 187, 1671
BspANI	GGCC	6 cut(s)	1539, 1791, 1909, 2498, 2536, 2622
BspCNI	CTCAG	5 cut(s)	1288, 2086, 2095, 2236, 2840
BspEI	TCCGGA	1 cut(s)	2854
BspFNI	CGCG	1 cut(s)	187
BspLI	GGNNCC	1 cut(s)	2419
BspMAI	CTGCAG	1 cut(s)	1327
BspMI	ACCTGC	1 cut(s)	455
BspPI	GGATC	1 cut(s)	158
BspT104I	TTCGAA	1 cut(s)	1490
BspTI	CTTAAG	1 cut(s)	1691
BsrBI	CCGCTC	1 cut(s)	1673
BsrDI	GCAATG	3 cut(s)	309, 628, 1792
BsrGI	TGTACA	2 cut(s)	1135, 1646
BsrI	ACTGG	5 cut(s)	177, 1449, 1941, 2493, 2697
BssMI	GATC	8 cut(s)	163, 704, 745, 1159, 1279, 2149, 2464, 2907
BssNAI	GTATAC	1 cut(s)	1563
Bst1107I	GTATAC	1 cut(s)	1563
Bst2UI	CCWGG	2 cut(s)	1215, 2624
Bst4CI	ACNGT	5 cut(s)	13, 907, 1368, 2138, 2756
Bst6I	CTCTTC	3 cut(s)	81, 951, 2712
BstAFI	CTTAAG	1 cut(s)	1691
BstAUI	TGTACA	2 cut(s)	1135, 1646
BstBAI	YACGTR	2 cut(s)	530, 1560
BstBI	TTCGAA	1 cut(s)	1490
BstC8I	GCNNGC	3 cut(s)	987, 1320, 1822
BstFNI	CGCG	1 cut(s)	187
BstH2I	RGCGCY	1 cut(s)	2173
BstHHI	GCGC	3 cut(s)	658, 2172, 2224
BstKTI	GATC	8 cut(s)	166, 707, 748, 1162, 1282, 2152, 2467, 2910
BstMAI	GTCTC	3 cut(s)	789, 1757, 2601
BstMBI	GATC	8 cut(s)	163, 704, 745, 1159, 1279, 2149, 2464, 2907
BstMWI	GCNNNNNNNGC	2 cut(s)	1301, 2407
BstNI	CCWGG	2 cut(s)	1215, 2624
BstNSI	RCATGY	4 cut(s)	151, 1142, 1213, 2394
BstSCI	CCNGG	2 cut(s)	1213, 2622
BstSFI	CTRYAG	4 cut(s)	97, 1323, 2752, 2872
BstSLI	GKGCMC	2 cut(s)	276, 2488
BstUI	CGCG	1 cut(s)	187
BstV1I	GCAGC	2 cut(s)	1309, 1860
BstV2I	GAAGAC	1 cut(s)	17
BstZ17I	GTATAC	1 cut(s)	1563
BsuRI	GGCC	6 cut(s)	1539, 1791, 1909, 2498, 2536, 2622
BtgZI	GCGATG	1 cut(s)	2366
BtsI	GCAGTG	1 cut(s)	111
BtsIMutI	CAGTG	7 cut(s)	111, 184, 2241, 2486, 2771, 2917, 2963
BveI	ACCTGC	1 cut(s)	455
Cac8I	GCNNGC	3 cut(s)	987, 1320, 1822
CaiI	CAGNNNCTG	1 cut(s)	320
CfoI	GCGC	3 cut(s)	658, 2172, 2224
Cfr13I	GGNCC	1 cut(s)	2497
CseI	GACGC	1 cut(s)	308
Csp6I	GTAC	6 cut(s)	214, 527, 1136, 1452, 1647, 1876
CspCI	CAANNNNNGTGG	2 cut(s)	2728, 2763
CviAII	CATG	6 cut(s)	148, 1139, 1210, 1682, 2108, 2391
CviQI	GTAC	6 cut(s)	214, 527, 1136, 1452, 1647, 1876
DpnI	GATC	8 cut(s)	165, 706, 747, 1161, 1281, 2151, 2466, 2909
DpnII	GATC	8 cut(s)	163, 704, 745, 1159, 1279, 2149, 2464, 2907
DraIII	CACNNNGTG	1 cut(s)	1368
EaeI	YGGCCR	1 cut(s)	1789
Eam1104I	CTCTTC	3 cut(s)	81, 951, 2712
EarI	CTCTTC	3 cut(s)	81, 951, 2712
EciI	GGCGGA	1 cut(s)	126
Ecl136II	GAGCTC	1 cut(s)	2401
Eco24I	GRGCYC	1 cut(s)	2403
Eco32I	GATATC	2 cut(s)	927, 2555
Eco53kI	GAGCTC	1 cut(s)	2401
Eco57I	CTGAAG	1 cut(s)	1764
EcoICRI	GAGCTC	1 cut(s)	2401
EcoRI	GAATTC	2 cut(s)	557, 2212
EcoRII	CCWGG	2 cut(s)	1213, 2622
EcoRV	GATATC	2 cut(s)	927, 2555
EcoT22I	ATGCAT	1 cut(s)	1174
EcoT38I	GRGCYC	1 cut(s)	2403
FaeI	CATG	6 cut(s)	151, 1142, 1213, 1685, 2111, 2394
FalI	AAGNNNNNCTT	6 cut(s)	694, 726, 933, 965, 1254, 1286
FaqI	GGGAC	3 cut(s)	1098, 1844, 2901
FatI	CATG	6 cut(s)	147, 1138, 1209, 1681, 2107, 2390
FauI	CCCGC	1 cut(s)	180
FauNDI	CATATG	3 cut(s)	1168, 1924, 2946
FblI	GTMKAC	5 cut(s)	240, 333, 1227, 1554, 1562
Fnu4HI	GCNGC	2 cut(s)	1323, 1849
FriOI	GRGCYC	1 cut(s)	2403
Fsp4HI	GCNGC	2 cut(s)	1323, 1849
FspBI	CTAG	5 cut(s)	117, 303, 2069, 2600, 2930
GlaI	GCGC	3 cut(s)	657, 2171, 2223
GluI	GCNGC	2 cut(s)	1323, 1849
GsaI	CCCAGC	2 cut(s)	1061, 1386
HaeII	RGCGCY	1 cut(s)	2173
HaeIII	GGCC	6 cut(s)	1539, 1791, 1909, 2498, 2536, 2622
HapII	CCGG	2 cut(s)	140, 2855
HgaI	GACGC	1 cut(s)	308
HhaI	GCGC	3 cut(s)	658, 2172, 2224
Hin1II	CATG	6 cut(s)	151, 1142, 1213, 1685, 2111, 2394
Hin6I	GCGC	3 cut(s)	656, 2170, 2222
HinP1I	GCGC	3 cut(s)	656, 2170, 2222
HincII	GTYRAC	4 cut(s)	241, 334, 517, 2749
HindII	GTYRAC	4 cut(s)	241, 334, 517, 2749
HindIII	AAGCTT	4 cut(s)	942, 1302, 2286, 2294
HpaII	CCGG	2 cut(s)	140, 2855
HphI	GGTGA	2 cut(s)	85, 1268
Hpy188I	TCNGA	8 cut(s)	695, 1338, 1744, 2022, 2104, 2830, 2897, 2983
Hpy99I	CGWCG	3 cut(s)	164, 338, 1661
HpyAV	CCTTC	7 cut(s)	708, 1010, 1091, 1696, 1739, 1997, 2564
HpyCH4III	ACNGT	5 cut(s)	13, 907, 1368, 2138, 2756
HpyCH4IV	ACGT	5 cut(s)	252, 529, 1559, 1656, 2741
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1301, 2407
HpySE526I	ACGT	5 cut(s)	252, 529, 1559, 1656, 2741
Hsp92II	CATG	6 cut(s)	151, 1142, 1213, 1685, 2111, 2394
HspAI	GCGC	3 cut(s)	656, 2170, 2222
Kpn2I	TCCGGA	1 cut(s)	2854
Kzo9I	GATC	8 cut(s)	163, 704, 745, 1159, 1279, 2149, 2464, 2907
LmnI	GCTCC	2 cut(s)	1928, 2437
Lsp1109I	GCAGC	2 cut(s)	1309, 1860
MaeI	CTAG	5 cut(s)	117, 303, 2069, 2600, 2930
MaeII	ACGT	5 cut(s)	252, 529, 1559, 1656, 2741
MaeIII	GTNAC	8 cut(s)	1012, 1205, 1256, 1660, 1765, 1918, 2338, 2443
MalI	GATC	8 cut(s)	165, 706, 747, 1161, 1281, 2151, 2466, 2909
MbiI	CCGCTC	1 cut(s)	1673
MboI	GATC	8 cut(s)	163, 704, 745, 1159, 1279, 2149, 2464, 2907
MhlI	GDGCHC	3 cut(s)	276, 2403, 2488
MlsI	TGGCCA	1 cut(s)	1791
MluNI	TGGCCA	1 cut(s)	1791
MlyI	GAGTC	4 cut(s)	749, 1259, 2043, 2603
MmeI	TCCRAC	2 cut(s)	1266, 1965
Mox20I	TGGCCA	1 cut(s)	1791
Mph1103I	ATGCAT	1 cut(s)	1174
MroI	TCCGGA	1 cut(s)	2854
MroXI	GAANNNNTTC	2 cut(s)	546, 2416
MscI	TGGCCA	1 cut(s)	1791
MslI	CAYNNNNRTG	3 cut(s)	820, 1167, 2246
Msp20I	TGGCCA	1 cut(s)	1791
MspA1I	CMGCKG	1 cut(s)	1057
MspCI	CTTAAG	1 cut(s)	1691
MspI	CCGG	2 cut(s)	140, 2855
MspR9I	CCNGG	2 cut(s)	1215, 2624
MvaI	CCWGG	2 cut(s)	1215, 2624
MvnI	CGCG	1 cut(s)	187
MwoI	GCNNNNNNNGC	2 cut(s)	1301, 2407
NdeI	CATATG	3 cut(s)	1168, 1924, 2946
NdeII	GATC	8 cut(s)	163, 704, 745, 1159, 1279, 2149, 2464, 2907
NlaIII	CATG	6 cut(s)	151, 1142, 1213, 1685, 2111, 2394
NlaIV	GGNNCC	1 cut(s)	2419
NmuCI	GTSAC	4 cut(s)	1205, 1256, 1660, 2338
NsiI	ATGCAT	1 cut(s)	1174
NspI	RCATGY	4 cut(s)	151, 1142, 1213, 2394
NspV	TTCGAA	1 cut(s)	1490
PciI	ACATGT	1 cut(s)	147
PdmI	GAANNNNTTC	2 cut(s)	546, 2416
PfeI	GAWTC	8 cut(s)	52, 182, 230, 724, 769, 2017, 2112, 2574
PkrI	GCNGC	2 cut(s)	1324, 1850
PleI	GAGTC	4 cut(s)	749, 1259, 2043, 2602
PpsI	GAGTC	4 cut(s)	749, 1259, 2043, 2602
Ppu21I	YACGTR	2 cut(s)	530, 1560
PscI	ACATGT	1 cut(s)	147
PshBI	ATTAAT	1 cut(s)	1347
PsiI	TTATAA	3 cut(s)	483, 714, 2292
Psp124BI	GAGCTC	1 cut(s)	2403
Psp1406I	AACGTT	1 cut(s)	252
Psp6I	CCWGG	2 cut(s)	1213, 2622
PspFI	CCCAGC	2 cut(s)	1057, 1382
PspGI	CCWGG	2 cut(s)	1213, 2622
PspN4I	GGNNCC	1 cut(s)	2419
PspPI	GGNCC	1 cut(s)	2497
PstI	CTGCAG	1 cut(s)	1327
PstNI	CAGNNNCTG	1 cut(s)	320
PvuII	CAGCTG	1 cut(s)	1057
RsaI	GTAC	6 cut(s)	215, 528, 1137, 1453, 1648, 1877
RsaNI	GTAC	6 cut(s)	214, 527, 1136, 1452, 1647, 1876
RseI	CAYNNNNRTG	3 cut(s)	820, 1167, 2246
SacI	GAGCTC	1 cut(s)	2403
SalI	GTCGAC	2 cut(s)	239, 332
SatI	GCNGC	2 cut(s)	1323, 1849
Sau3AI	GATC	8 cut(s)	163, 704, 745, 1159, 1279, 2149, 2464, 2907
Sau96I	GGNCC	1 cut(s)	2497
ScaI	AGTACT	1 cut(s)	215
SchI	GAGTC	4 cut(s)	749, 1259, 2043, 2603
ScrFI	CCNGG	2 cut(s)	1215, 2624
SduI	GDGCHC	3 cut(s)	276, 2403, 2488
SfcI	CTRYAG	4 cut(s)	97, 1323, 2752, 2872
SfuI	TTCGAA	1 cut(s)	1490
SmiMI	CAYNNNNRTG	3 cut(s)	820, 1167, 2246
SmlI	CTYRAG	6 cut(s)	659, 677, 737, 1691, 2207, 2396
SmoI	CTYRAG	6 cut(s)	659, 677, 737, 1691, 2207, 2396
SsiI	CCGC	3 cut(s)	137, 187, 1671
SspI	AATATT	1 cut(s)	1762
SspMI	CTAG	5 cut(s)	117, 303, 2069, 2600, 2930
SstI	GAGCTC	1 cut(s)	2403
StyD4I	CCNGG	2 cut(s)	1213, 2622
TaaI	ACNGT	5 cut(s)	13, 907, 1368, 2138, 2756
TaiI	ACGT	5 cut(s)	255, 532, 1562, 1659, 2744
TaqI	TCGA	8 cut(s)	159, 240, 333, 707, 1490, 1965, 2511, 2610
TatI	WGTACW	4 cut(s)	213, 1135, 1646, 1875
TfiI	GAWTC	8 cut(s)	52, 182, 230, 724, 769, 2017, 2112, 2574
TscAI	CASTG	7 cut(s)	118, 184, 2248, 2493, 2778, 2917, 2963
TseFI	GTSAC	4 cut(s)	1205, 1256, 1660, 2338
TseI	GCWGC	2 cut(s)	1322, 1848
Tsp45I	GTSAC	4 cut(s)	1205, 1256, 1660, 2338
TspGWI	ACGGA	2 cut(s)	899, 1403
TspRI	CASTG	7 cut(s)	118, 184, 2248, 2493, 2778, 2917, 2963
Vha464I	CTTAAG	1 cut(s)	1691
VneI	GTGCAC	1 cut(s)	2484
VspI	ATTAAT	1 cut(s)	1347
XapI	RAATTY	5 cut(s)	557, 602, 889, 2212, 2952
XbaI	TCTAGA	1 cut(s)	2929
XceI	RCATGY	4 cut(s)	151, 1142, 1213, 2394
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1799
XmiI	GTMKAC	5 cut(s)	240, 333, 1227, 1554, 1562
XmnI	GAANNNNTTC	2 cut(s)	546, 2416
XspI	CTAG	5 cut(s)	117, 303, 2069, 2600, 2930
ZrmI	AGTACT	1 cut(s)	215
Zsp2I	ATGCAT	1 cut(s)	1174

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.