Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0003234

Physical Location & Seq

Genomic Coordinates Forward (+)

16935283 .. 16943511

Gene Structure 8229 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G186300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3045 bp

ATGAGCCGAAGACGTTTGAAAACTCTCCTCTTGCACTCAATCTCCACCATGTCATCGTCCCCTCTTAAATCCAACCCCCTTCTCACCACAAGTCAATCACAAGCCTTCCCTTCTCCATCCAAATTCTTTCACCAAAATCTCAAACTTGGCCTGGCCAGATTCCTTTGCACTTCTTCGCCGGACAATCTCGATGGTCTGGTCGATCCTCAAGAATTGTCAATACCTGGGAGTTCTGGAGTTGAGTCTATTTCGGCAGAGGAATTCGCCTCTTTGCGCGATTCGGTGTTGGATACCAATGCCGGTGATGGGTCTTCAACGCCTAAATTTGAATCAGATAAGTTTTCTAATAATGCCATTTTGATTTCGAATAAGATTTGGAATTATAATGATGCGTTTGGTGACCAGACCCAGAAGTTTCTTAGGCAGTTTAGGGATAATCTGAATGAAACTCTGGTGATGGAAGTACTGAAGCTTATTCGAAATCCTGAATTAGGTGTGAAGTTTTTCATATGGGCAGGTAGACAAATTGGGTATAGTCACACTGGTCCTGTGTATGATGCATTGTTAGAGTTATTGGAGTGTGGTAGTAATGATAGAGTACCAGAACATTTTCTCCGAGAAATTAAGGGTGATGACAGAGAGGTGCTTGGGAAGTTGCTTAATGTGTTGATACGGAAGTGTTGCCGAAATGGTTTGTGGAATGTAGCTTTGGAAGAGCTTGGGAGGCTTAAGGATTTTGGATACAAGCCAACTCGAACAACTTTCAATGTTTTGGTTCAAGTGTTTTTAAAAGCTGATAGGTTGGATACAGCACACTTGGTTCATGTGGAGATGTCGGATTTGGGGTTTAATATGGATGAGTATACACTTGGTTGCTTTGTTCACGCCCTTTGCAAATCTGGGAGGTGGAAGGAAGCGCTCACATTGATTGAGAAGGAAGAGTTTGTGCCCAATACTGCTCTTTATACAAAGATGATATCTGGGTTGTGTGAAGCTTCACTTTTTGAGGAAGCTATGGATTTCTTGAACAGAATGCGGTGTGATTCTTGCATTCCTAACGTCGTAACCTATAGGATTTTGCTTTGTGGGTGTTTAAAAAAAAGACAGCTCGGTAGGTGCAAGAGGATTCTTAGTATGATGATCACAGAAGGTTGTTATCCAAGCCGTAAGATATTTAATTCTCTTGTACATGCTTATTGCAGGTTAGGAGATTACTTTTATGCTTACAAGTTGCTTAAGAAAATGGTAAGATGCGGGTGCCACCCAGGCTATGTGGTTTACAATATCTTGATTGGTGGTATATGTGGAAACGAGGAATTACCTAGCTCAGATATGTTAGATTTGGCTGAAAAAGCTTATGGTGAGATGCTTGATGCAGGGGTTGTGTTAAATAAGGTCAATGTGAGCAATTTTGCACGATGTCTTTGTGACGCCCGAAAATATGAGAAAGCCTATAATGTTATCCGTGAAATGATGAGAAAGGGTTTTGTGCCGGACACTAGTACATACTCTAAAGTTATTGGCTTTTTGTGTAATGCATCCAAGGTAGAACAAGCATTTTTGTTGTTTGAAGAAATGAAAAGGAATAGTATTATTCCTGATGTCTATACCTATACTATTTTAATTGATAGTTTTTCTAAAGCTGGCCTTATTGAACAGGCTCATAGCTGGTTTAATGAAATGGTAGGAAATGGCTGTGCTCCTAACGTGGTGACTTATACTGCTCTTATACATGCATACCTTAAAGCAAAAAAGGTGTCTGATGCAAATCAACTTTTTGAGATGATGTTGACTGAAGGTTGCATTCCCAATGTTGTTACTTATACTGCTTTAATTGACGGTCATTGTAAAGCTGGTAGAATTGAAAAGGCCTGCCTGATTTATGAAAGGATGAGAGGTAATGTGGAAATCCCTGATGTTGATATGTATTTTAGAATTGACGATCAGAGTATGAAAGAACCTAATGTTTATACTTATGGAGCTTTGGTGGATGGATTATGCAAAGCACACAAGGTCAAAGAGGCCCGTGACTTATTGGATGCTATGTCGGTAGAAGGTTGTGAACCTAACCATATTGTGTATGATGCTCTTATAGATGGATTTTGCAAATATGGGAAGCTAGATGAAGCGCAAGAGGTGTTTACTAAGATGTCAGAGAAAGGGTACAGTCCAAATGTGTATACTTACAGCTCTTTGATTGATAGGTTGTTTAAGGATAAAAGACTAGATCTTGCTTTAAAAGTCTTGTCTAAAATGCTAGAAAACTCTTGTGCACCAAATGTTGTTATCTACACAGAGATGATTGATGGTCTTTGTAAAGTTGGGAAGACAGATGAAGCCTATAAGCTTATGCTGATGATGGAAGAAAAAGGATGTTGTCCAAATGTTGTTACTTATACTGCAATGATAGATGGCTTTGGGAAAGCAGGTAAAATTGAAAAATGTCTTGAGCTCTTTAAAGAAATGAGCTCTAAAGGTTGTGCTCCAAATTTTGTCACGTACAGGGTTTTGATAAACCATTGCTGTTCAACTGGCCTTTTGGATGAAGCTCATAGGCTTTTGGATGAAATGAAACAAACATATTGGCCAAAGCATATGGTAGGCTACCATAAAGTTATTGAAGGTTACAACCGAGAGTTCATGAACTCTCTTGGGATTTTAGATGAGATGAGTGAGTGTGGTTCAGTGTCAATTATTCACATATACAGAGTTTTGATTGATAATTTTGTAAAGGCTGGAAGATTGGAATTTGCTCTTGAGCTGCATGACGAGATTTCATCATCTTCACCTTTTACATCTGTGAACAAGAATATGTATACTTCATTGATTGAAAGTCTTTTACATGCAAATAAGGTTGGTAAGGCACTGGAGCTGTTTGCAGACATGATAAGGCAAGGTGGTATTCCAGAGCTTATGACATTGTTTGACCTTATTAAAGGGCTCATTAAAATTAATAAGTGGGATGAAGCTCTTCAACTATCGGATAGCATATGCCAGATGGACATCCATTGGCTTCTGCAAGAAGAGATATCTGACAGAAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

1015

Amino Acids

114.73

Weight (kDa)

6.18

Isoelectric Point (pI)

36.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003234)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06710 AT1G06710 AT1G06710 AT1G06710 AT1G06710 AT1G06710 AT1G06710 AT1G06710 AT1G06710 AT1G06710 AT1G06710 AT1G06710 AT1G06710 AT1G06710 AT1G06710 AT1G06710 AT1G06710 AT1G06710 AT1G06710
fragaria_vesca	FvH4_4g11500
malus_domestica	MD04G1034700.v1.1
prunus_persica	Prupe.1G186300_v2.0.a1
pyrus_communis	pycom04g02410 pycom04g02880
rosa_chinensis	RchiOBHm_Chr4g0408411
rosa_laevigata	RLG00000008653
rosa_multiflora	Rmu_ssc0000173.1_g000003
rosa_roxburghii	Rroxscaffold_5G00352870
rosa_rugosa	Rorug04G0085100 Rorug04G0085200 Rorug04G0085300 Rorug04G0085400
rosa_samantha	Rh4AG150300 Rh4BG147200 Rh4CG157600 Rh4DG143200
rosa_wichuraiana	Rw4G012270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	384
Acc36I	ACCTGC	3 cut(s)	506, 1191, 2417
AccB1I	GGYRCC	1 cut(s)	1257
AccI	GTMKAC	4 cut(s)	520, 863, 2180, 2816
AccII	CGCG	1 cut(s)	276
AciI	CCGC	2 cut(s)	1036, 1254
AclWI	GGATC	1 cut(s)	197
AcoI	YGGCCR	2 cut(s)	153, 2585
AcsI	RAATTY	5 cut(s)	122, 260, 323, 2488, 2747
AcuI	CTGAAG	2 cut(s)	488, 1815
AcyI	GRCGYC	1 cut(s)	1431
AfaI	GTAC	6 cut(s)	465, 600, 1188, 1504, 2165, 2501
AfeI	AGCGCT	1 cut(s)	918
AfiI	CCNNNNNNNGG	2 cut(s)	306, 491
AflII	CTTAAG	2 cut(s)	728, 1235
AhlI	ACTAGT	1 cut(s)	1499
AjnI	CCWGG	3 cut(s)	150, 223, 1264
AjuI	GAANNNNNNNTTGG	2 cut(s)	692, 724
AloI	GAACNNNNNNTCC	2 cut(s)	597, 629
Alw21I	GWGCWC	5 cut(s)	1702, 2275, 2454, 2471, 2485
Alw44I	GTGCAC	1 cut(s)	2271
AlwI	GGATC	1 cut(s)	197
Aor51HI	AGCGCT	1 cut(s)	918
AoxI	GGCC	7 cut(s)	148, 153, 1645, 1869, 2022, 2533, 2585
ApaLI	GTGCAC	1 cut(s)	2271
ApeKI	GCWGC	1 cut(s)	2761
ApoI	RAATTY	5 cut(s)	122, 260, 323, 2488, 2747
ArsI	GACNNNNNNTTYG	2 cut(s)	1742, 1774
AseI	ATTAAT	1 cut(s)	2952
Asp700I	GAANNNNTTC	3 cut(s)	503, 609, 2970
AspLEI	GCGC	3 cut(s)	276, 919, 2131
AspS9I	GGNCC	2 cut(s)	545, 2023
AsuHPI	GGTGA	9 cut(s)	76, 122, 314, 410, 466, 641, 1373, 1723, 2778
AsuII	TTCGAA	2 cut(s)	365, 478
AvaII	GGWCC	1 cut(s)	545
BaeGI	GKGCMC	2 cut(s)	951, 2275
BaeI	ACNNNNGTAYC	2 cut(s)	662, 695
BalI	TGGCCA	2 cut(s)	155, 2587
BanI	GGYRCC	1 cut(s)	1257
BanII	GRGCYC	3 cut(s)	2454, 2471, 2943
BbsI	GAAGAC	3 cut(s)	16, 303, 2333
Bbv12I	GWGCWC	5 cut(s)	1702, 2275, 2454, 2471, 2485
BbvI	GCAGC	1 cut(s)	2748
BceAI	ACGGC	1 cut(s)	1149
BciT130I	CCWGG	3 cut(s)	152, 225, 1266
BciVI	GTATCC	3 cut(s)	283, 734, 799
BclI	TGATCA	1 cut(s)	1140
BcuI	ACTAGT	1 cut(s)	1499
BfaI	CTAG	5 cut(s)	1323, 1500, 2120, 2225, 2258
BfmI	CTRYAG	1 cut(s)	1069
BfoI	RGCGCY	1 cut(s)	920
BfrI	CTTAAG	2 cut(s)	728, 1235
BfuAI	ACCTGC	3 cut(s)	506, 1191, 2417
BfuI	GTATCC	3 cut(s)	283, 734, 799
BglI	GCCNNNNNGGC	1 cut(s)	1266
BglII	AGATCT	1 cut(s)	2227
BisI	GCNGC	1 cut(s)	2762
BlsI	GCNGC	1 cut(s)	2763
BmcAI	AGTACT	1 cut(s)	465
Bme1390I	CCNGG	3 cut(s)	152, 225, 1266
Bme18I	GGWCC	1 cut(s)	545
BmgT120I	GGNCC	2 cut(s)	545, 2023
BmiI	GGNNCC	1 cut(s)	1259
BmrFI	CCNGG	3 cut(s)	152, 225, 1266
BmsI	GCATC	9 cut(s)	379, 547, 1241, 1356, 1363, 1547, 1753, 2029, 2074
BpiI	GAAGAC	3 cut(s)	16, 303, 2333
BpmI	CTGGAG	2 cut(s)	255, 2888
Bpu14I	TTCGAA	2 cut(s)	365, 478
BpuEI	CTTGAG	3 cut(s)	192, 2468, 2777
BsaAI	YACGTR	1 cut(s)	2499
BsaBI	GATNNNNATC	2 cut(s)	1767, 3002
BsaHI	GRCGYC	1 cut(s)	1431
BsaJI	CCNNGG	3 cut(s)	224, 1264, 1542
BsaXI	ACNNNNNCTCC	6 cut(s)	26, 56, 597, 627, 1971, 2001
Bsc4I	CCNNNNNNNGG	2 cut(s)	306, 491
Bse118I	RCCGGY	1 cut(s)	299
Bse1I	ACTGG	3 cut(s)	547, 2536, 2871
Bse3DI	GCAATG	2 cut(s)	2409, 2518
Bse8I	GATNNNNATC	2 cut(s)	1767, 3002
BseBI	CCWGG	3 cut(s)	152, 225, 1266
BseDI	CCNNGG	3 cut(s)	224, 1264, 1542
BseJI	GATNNNNATC	2 cut(s)	1767, 3002
BseLI	CCNNNNNNNGG	2 cut(s)	306, 491
BseMI	GCAATG	2 cut(s)	2409, 2518
BseMII	CTCAG	1 cut(s)	1341
BseNI	ACTGG	3 cut(s)	547, 2536, 2871
BseRI	GAGGAG	1 cut(s)	17
BseSI	GKGCMC	2 cut(s)	951, 2275
BseXI	GCAGC	1 cut(s)	2748
Bsh1236I	CGCG	1 cut(s)	276
BshFI	GGCC	7 cut(s)	150, 155, 1647, 1871, 2024, 2535, 2587
BshNI	GGYRCC	1 cut(s)	1257
BsiHKAI	GWGCWC	5 cut(s)	1702, 2275, 2454, 2471, 2485
BsiSI	CCGG	3 cut(s)	179, 300, 1493
BslFI	GGGAC	1 cut(s)	43
BslI	CCNNNNNNNGG	2 cut(s)	306, 491
BsmFI	GGGAC	1 cut(s)	43
BsmI	GAATGC	3 cut(s)	1038, 1050, 1803
BsnI	GGCC	7 cut(s)	150, 155, 1647, 1871, 2024, 2535, 2587
Bsp119I	TTCGAA	2 cut(s)	365, 478
Bsp1286I	GDGCHC	7 cut(s)	951, 1702, 2275, 2454, 2471, 2485, 2943
Bsp1407I	TGTACA	1 cut(s)	1186
Bsp143I	GATC	4 cut(s)	202, 1140, 1942, 2227
BspACI	CCGC	2 cut(s)	1036, 1254
BspANI	GGCC	7 cut(s)	150, 155, 1647, 1871, 2024, 2535, 2587
BspCNI	CTCAG	1 cut(s)	1340
BspFNI	CGCG	1 cut(s)	276
BspHI	TCATGA	1 cut(s)	2640
BspLI	GGNNCC	1 cut(s)	1259
BspMI	ACCTGC	3 cut(s)	506, 1191, 2417
BspPI	GGATC	1 cut(s)	197
BspQI	GCTCTTC	2 cut(s)	708, 2976
BspT104I	TTCGAA	2 cut(s)	365, 478
BspT107I	GGYRCC	1 cut(s)	1257
BspTI	CTTAAG	2 cut(s)	728, 1235
BsrDI	GCAATG	2 cut(s)	2409, 2518
BsrFI	RCCGGY	1 cut(s)	299
BsrGI	TGTACA	1 cut(s)	1186
BsrI	ACTGG	3 cut(s)	547, 2536, 2871
BssAI	RCCGGY	1 cut(s)	299
BssECI	CCNNGG	3 cut(s)	224, 1264, 1542
BssMI	GATC	4 cut(s)	202, 1140, 1942, 2227
BssNAI	GTATAC	3 cut(s)	864, 2181, 2817
BssNI	GRCGYC	1 cut(s)	1431
BssT1I	CCWWGG	1 cut(s)	1542
Bst1107I	GTATAC	3 cut(s)	864, 2181, 2817
Bst2UI	CCWGG	3 cut(s)	152, 225, 1266
Bst4CI	ACNGT	2 cut(s)	1841, 2168
Bst6I	CTCTTC	4 cut(s)	708, 933, 2976, 3018
BstACI	GRCGYC	1 cut(s)	1431
BstAFI	CTTAAG	2 cut(s)	728, 1235
BstAUI	TGTACA	1 cut(s)	1186
BstBAI	YACGTR	1 cut(s)	2499
BstBI	TTCGAA	2 cut(s)	365, 478
BstC8I	GCNNGC	2 cut(s)	1645, 1873
BstDEI	CTNAG	4 cut(s)	419, 1130, 1327, 2145
BstEII	GGTNACC	1 cut(s)	398
BstENI	CCTNNNNNAGG	1 cut(s)	489
BstFNI	CGCG	1 cut(s)	276
BstH2I	RGCGCY	1 cut(s)	920
BstHHI	GCGC	3 cut(s)	276, 919, 2131
BstKTI	GATC	4 cut(s)	205, 1143, 1945, 2230
BstMBI	GATC	4 cut(s)	202, 1140, 1942, 2227
BstMWI	GCNNNNNNNGC	3 cut(s)	724, 1266, 1352
BstNI	CCWGG	3 cut(s)	152, 225, 1266
BstNSI	RCATGY	3 cut(s)	1193, 1736, 2846
BstPI	GGTNACC	1 cut(s)	398
BstSCI	CCNGG	3 cut(s)	150, 223, 1264
BstSFI	CTRYAG	1 cut(s)	1069
BstSLI	GKGCMC	2 cut(s)	951, 2275
BstUI	CGCG	1 cut(s)	276
BstV1I	GCAGC	1 cut(s)	2748
BstV2I	GAAGAC	3 cut(s)	16, 303, 2333
BstX2I	RGATCY	1 cut(s)	2227
BstYI	RGATCY	1 cut(s)	2227
BstZ17I	GTATAC	3 cut(s)	864, 2181, 2817
BsuI	GTATCC	3 cut(s)	283, 734, 799
BsuRI	GGCC	7 cut(s)	150, 155, 1647, 1871, 2024, 2535, 2587
BtsIMutI	CAGTG	3 cut(s)	540, 2691, 2864
BveI	ACCTGC	3 cut(s)	506, 1191, 2417
Cac8I	GCNNGC	2 cut(s)	1645, 1873
CciI	TCATGA	1 cut(s)	2640
CfoI	GCGC	3 cut(s)	276, 919, 2131
Cfr10I	RCCGGY	1 cut(s)	299
Cfr13I	GGNCC	2 cut(s)	545, 2023
CseI	GACGC	1 cut(s)	1439
Csp6I	GTAC	6 cut(s)	464, 599, 1187, 1503, 2164, 2500
CviAII	CATG	8 cut(s)	49, 824, 1190, 1733, 2641, 2765, 2843, 2884
CviQI	GTAC	6 cut(s)	464, 599, 1187, 1503, 2164, 2500
DdeI	CTNAG	4 cut(s)	419, 1130, 1327, 2145
DpnI	GATC	4 cut(s)	204, 1142, 1944, 2229
DpnII	GATC	4 cut(s)	202, 1140, 1942, 2227
DraI	TTTAAA	4 cut(s)	789, 1095, 2238, 2458
EaeI	YGGCCR	2 cut(s)	153, 2585
Eam1104I	CTCTTC	4 cut(s)	708, 933, 2976, 3018
EarI	CTCTTC	4 cut(s)	708, 933, 2976, 3018
Ecl136II	GAGCTC	2 cut(s)	2452, 2469
Eco130I	CCWWGG	1 cut(s)	1542
Eco147I	AGGCCT	1 cut(s)	1871
Eco24I	GRGCYC	3 cut(s)	2454, 2471, 2943
Eco32I	GATATC	2 cut(s)	978, 3030
Eco47I	GGWCC	1 cut(s)	545
Eco47III	AGCGCT	1 cut(s)	918
Eco53kI	GAGCTC	2 cut(s)	2452, 2469
Eco57I	CTGAAG	2 cut(s)	488, 1815
Eco91I	GGTNACC	1 cut(s)	398
EcoICRI	GAGCTC	2 cut(s)	2452, 2469
EcoNI	CCTNNNNNAGG	1 cut(s)	489
EcoO65I	GGTNACC	1 cut(s)	398
EcoRI	GAATTC	1 cut(s)	260
EcoRII	CCWGG	3 cut(s)	150, 223, 1264
EcoRV	GATATC	2 cut(s)	978, 3030
EcoT14I	CCWWGG	1 cut(s)	1542
EcoT22I	ATGCAT	3 cut(s)	562, 1540, 1738
EcoT38I	GRGCYC	3 cut(s)	2454, 2471, 2943
ErhI	CCWWGG	1 cut(s)	1542
FaeI	CATG	8 cut(s)	52, 827, 1193, 1736, 2644, 2768, 2846, 2887
FalI	AAGNNNNNCTT	4 cut(s)	984, 1016, 1632, 1664
FaqI	GGGAC	1 cut(s)	43
FatI	CATG	8 cut(s)	48, 823, 1189, 1732, 2640, 2764, 2842, 2883
FauI	CCCGC	1 cut(s)	1247
FauNDI	CATATG	3 cut(s)	509, 2595, 2990
FbaI	TGATCA	1 cut(s)	1140
FblI	GTMKAC	4 cut(s)	520, 863, 2180, 2816
Fnu4HI	GCNGC	1 cut(s)	2762
FriOI	GRGCYC	3 cut(s)	2454, 2471, 2943
Fsp4HI	GCNGC	1 cut(s)	2762
FspBI	CTAG	5 cut(s)	1323, 1500, 2120, 2225, 2258
GlaI	GCGC	3 cut(s)	275, 918, 2130
GluI	GCNGC	1 cut(s)	2762
GsuI	CTGGAG	2 cut(s)	255, 2888
HaeII	RGCGCY	1 cut(s)	920
HaeIII	GGCC	7 cut(s)	150, 155, 1647, 1871, 2024, 2535, 2587
HapII	CCGG	3 cut(s)	179, 300, 1493
HgaI	GACGC	1 cut(s)	1439
HhaI	GCGC	3 cut(s)	276, 919, 2131
Hin1I	GRCGYC	1 cut(s)	1431
Hin1II	CATG	8 cut(s)	52, 827, 1193, 1736, 2644, 2768, 2846, 2887
Hin6I	GCGC	3 cut(s)	274, 917, 2129
HinP1I	GCGC	3 cut(s)	274, 917, 2129
HincII	GTYRAC	1 cut(s)	1791
HindII	GTYRAC	1 cut(s)	1791
HindIII	AAGCTT	4 cut(s)	470, 993, 1353, 2345
HinfI	GANTC	6 cut(s)	159, 242, 278, 329, 1043, 1126
HpaII	CCGG	3 cut(s)	179, 300, 1493
HphI	GGTGA	9 cut(s)	76, 122, 314, 410, 466, 641, 1373, 1723, 2778
Hpy99I	CGWCG	1 cut(s)	1064
HpyAV	CCTTC	9 cut(s)	89, 115, 120, 904, 928, 1142, 1790, 2048, 2615
HpyCH4III	ACNGT	2 cut(s)	1841, 2168
HpyCH4IV	ACGT	4 cut(s)	13, 1059, 1707, 2498
HpyF10VI	GCNNNNNNNGC	3 cut(s)	724, 1266, 1352
HpyF3I	CTNAG	4 cut(s)	419, 1130, 1327, 2145
HpySE526I	ACGT	4 cut(s)	13, 1059, 1707, 2498
Hsp92I	GRCGYC	1 cut(s)	1431
Hsp92II	CATG	8 cut(s)	52, 827, 1193, 1736, 2644, 2768, 2846, 2887
HspAI	GCGC	3 cut(s)	274, 917, 2129
Ksp22I	TGATCA	1 cut(s)	1140
Kzo9I	GATC	4 cut(s)	202, 1140, 1942, 2227
LguI	GCTCTTC	2 cut(s)	708, 2976
LmnI	GCTCC	4 cut(s)	1705, 1979, 2488, 2869
Lsp1109I	GCAGC	1 cut(s)	2748
LweI	GCATC	9 cut(s)	379, 547, 1241, 1356, 1363, 1547, 1753, 2029, 2074
MaeI	CTAG	5 cut(s)	1323, 1500, 2120, 2225, 2258
MaeII	ACGT	4 cut(s)	13, 1059, 1707, 2498
MalI	GATC	4 cut(s)	204, 1142, 1944, 2229
MboI	GATC	4 cut(s)	202, 1140, 1942, 2227
MflI	RGATCY	1 cut(s)	2227
MhlI	GDGCHC	7 cut(s)	951, 1702, 2275, 2454, 2471, 2485, 2943
MlsI	TGGCCA	2 cut(s)	155, 2587
MluNI	TGGCCA	2 cut(s)	155, 2587
MlyI	GAGTC	1 cut(s)	251
MmeI	TCCRAC	4 cut(s)	96, 267, 783, 816
Mox20I	TGGCCA	2 cut(s)	155, 2587
Mph1103I	ATGCAT	3 cut(s)	562, 1540, 1738
MroXI	GAANNNNTTC	3 cut(s)	503, 609, 2970
MscI	TGGCCA	2 cut(s)	155, 2587
MslI	CAYNNNNRTG	1 cut(s)	2297
Msp20I	TGGCCA	2 cut(s)	155, 2587
MspCI	CTTAAG	2 cut(s)	728, 1235
MspI	CCGG	3 cut(s)	179, 300, 1493
MspR9I	CCNGG	3 cut(s)	152, 225, 1266
Mva1269I	GAATGC	3 cut(s)	1038, 1050, 1803
MvaI	CCWGG	3 cut(s)	152, 225, 1266
MvnI	CGCG	1 cut(s)	276
MwoI	GCNNNNNNNGC	3 cut(s)	724, 1266, 1352
NdeI	CATATG	3 cut(s)	509, 2595, 2990
NdeII	GATC	4 cut(s)	202, 1140, 1942, 2227
NlaIII	CATG	8 cut(s)	52, 827, 1193, 1736, 2644, 2768, 2846, 2887
NlaIV	GGNNCC	1 cut(s)	1259
NmuCI	GTSAC	6 cut(s)	398, 536, 1427, 1711, 2027, 2494
NsiI	ATGCAT	3 cut(s)	562, 1540, 1738
NspI	RCATGY	3 cut(s)	1193, 1736, 2846
NspV	TTCGAA	2 cut(s)	365, 478
PagI	TCATGA	1 cut(s)	2640
PceI	AGGCCT	1 cut(s)	1871
PciSI	GCTCTTC	2 cut(s)	708, 2976
PctI	GAATGC	3 cut(s)	1038, 1050, 1803
PdmI	GAANNNNTTC	3 cut(s)	503, 609, 2970
PfeI	GAWTC	5 cut(s)	159, 278, 329, 1043, 1126
PkrI	GCNGC	1 cut(s)	2763
PleI	GAGTC	1 cut(s)	250
PpsI	GAGTC	1 cut(s)	250
Ppu21I	YACGTR	1 cut(s)	2499
PshBI	ATTAAT	1 cut(s)	2952
PsiI	TTATAA	1 cut(s)	384
Psp124BI	GAGCTC	2 cut(s)	2454, 2471
Psp6I	CCWGG	3 cut(s)	150, 223, 1264
PspEI	GGTNACC	1 cut(s)	398
PspGI	CCWGG	3 cut(s)	150, 223, 1264
PspN4I	GGNNCC	1 cut(s)	1259
PspPI	GGNCC	2 cut(s)	545, 2023
PsuI	RGATCY	1 cut(s)	2227
RsaI	GTAC	6 cut(s)	465, 600, 1188, 1504, 2165, 2501
RsaNI	GTAC	6 cut(s)	464, 599, 1187, 1503, 2164, 2500
RseI	CAYNNNNRTG	1 cut(s)	2297
SacI	GAGCTC	2 cut(s)	2454, 2471
SapI	GCTCTTC	2 cut(s)	708, 2976
SatI	GCNGC	1 cut(s)	2762
Sau3AI	GATC	4 cut(s)	202, 1140, 1942, 2227
Sau96I	GGNCC	2 cut(s)	545, 2023
ScaI	AGTACT	1 cut(s)	465
SchI	GAGTC	1 cut(s)	251
ScrFI	CCNGG	3 cut(s)	152, 225, 1266
SduI	GDGCHC	7 cut(s)	951, 1702, 2275, 2454, 2471, 2485, 2943
SfaNI	GCATC	9 cut(s)	379, 547, 1241, 1356, 1363, 1547, 1753, 2029, 2074
SfcI	CTRYAG	1 cut(s)	1069
SfuI	TTCGAA	2 cut(s)	365, 478
SinI	GGWCC	1 cut(s)	545
SmiMI	CAYNNNNRTG	1 cut(s)	2297
SmlI	CTYRAG	5 cut(s)	207, 728, 1235, 2447, 2756
SmoI	CTYRAG	5 cut(s)	207, 728, 1235, 2447, 2756
SpeI	ACTAGT	1 cut(s)	1499
SseBI	AGGCCT	1 cut(s)	1871
SsiI	CCGC	2 cut(s)	1036, 1254
SspMI	CTAG	5 cut(s)	1323, 1500, 2120, 2225, 2258
SstI	GAGCTC	2 cut(s)	2454, 2471
StuI	AGGCCT	1 cut(s)	1871
StyD4I	CCNGG	3 cut(s)	150, 223, 1264
StyI	CCWWGG	1 cut(s)	1542
TaaI	ACNGT	2 cut(s)	1841, 2168
TaiI	ACGT	4 cut(s)	16, 1062, 1710, 2501
TaqI	TCGA	5 cut(s)	189, 201, 365, 478, 754
TatI	WGTACW	3 cut(s)	463, 1186, 1502
TfiI	GAWTC	5 cut(s)	159, 278, 329, 1043, 1126
TscAI	CASTG	3 cut(s)	547, 2691, 2871
TseFI	GTSAC	6 cut(s)	398, 536, 1427, 1711, 2027, 2494
TseI	GCWGC	1 cut(s)	2761
Tsp45I	GTSAC	6 cut(s)	398, 536, 1427, 1711, 2027, 2494
TspGWI	ACGGA	2 cut(s)	688, 1454
TspRI	CASTG	3 cut(s)	547, 2691, 2871
Vha464I	CTTAAG	2 cut(s)	728, 1235
VneI	GTGCAC	1 cut(s)	2271
VpaK11BI	GGWCC	1 cut(s)	545
VspI	ATTAAT	1 cut(s)	2952
XagI	CCTNNNNNAGG	1 cut(s)	489
XapI	RAATTY	5 cut(s)	122, 260, 323, 2488, 2747
XceI	RCATGY	3 cut(s)	1193, 1736, 2846
XmiI	GTMKAC	4 cut(s)	520, 863, 2180, 2816
XmnI	GAANNNNTTC	3 cut(s)	503, 609, 2970
XspI	CTAG	5 cut(s)	1323, 1500, 2120, 2225, 2258
ZrmI	AGTACT	1 cut(s)	465
Zsp2I	ATGCAT	3 cut(s)	562, 1540, 1738

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.