Rorug04G0085100

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
12983128 .. 13081642
98515 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0085100.1

Sequence Viewer

Length: 3378 bp
ATGAAGCAGCCGGCGAACGGAGGTTCGTCCGGCGCCGCCGCACTCAATTCCGGCGAAGGCGGAGAGAATGTGAAGATCATAAACCCGGAGCTATGGCAGGCCTGCGCCGGGCCGCTGGTGAACTTGCCGCCGGCCGGGACCCACGTGGTGTACTTCCCTCAAGGCCACAGCGAACAGGTTGCTGCTTCTATGAAAAAGGATGTTGATGCTCAAATTCCAAACTATCCAAATCTTCCCTCCAAGCTGCTATGTCTCCTTCACAATGTCACCTTGCATGCGGACCCCGAAACGGACGAAGTTTATGCTCAGATGACACTTCAACCTGTACCCTCATTTGACAAGGACGCATTATTGAGATCAGATCTTGCCCTGAAGTCCAATAAGCCCCAACCGGAGTTTTTCTGTAAAACATTGACTGCCAGTGATACAAGCACTCATGGAGGTTTCTCTGTTCCCCGCCGTGCAGCGGAGAAGATTTTTCCTCCTCTTGATTTCAACATGCAACCACCTGCTCAAGAACTCGCTGCCAGGGATTTGCATGATACTGTTTGGACCTTCCGTCATATCTATCGTGGACAACCAAAACGCCACTTGCTTACGACAGGATGGAGCCTTTTTGTTAGTGGGAAGAGGCTTTTTGCTGGTGATGCTGTCTTGTTCATTAGGGATGAAAAGCAGCAGCTTCTCTTGGGCATTAGACGTGCTAACAGGCAACCAACCAACCTATCATCATCAGTTTTGTCAAGTGACAGTATGCATATTGGGATTTTGGCTGCTGCAGCTCATGCTGCTGCGAACAATAGCCCCTTCACGGTGTTCTACAATCCTAGGGCTAGTCCATCCGAATTTGTTATCCCTTTGGCTAAGTACTACAAGGCAGTTTGTGCGAACCAACTATCATTGGGCATGCGCTTTCGTATGATGTTTGAAACTGAAGAGTCAGGAACAAGAAGGTACATGGGTACAATTACAGGAATTAGTGATCTTGATCCTGTGAGATGGAAGAACTCACAATGGCGTAATTTGCAGGTTGGTTGGGACGAGTCAACTGCTGGGGAAAGGCGTAATCGGGTATCAATCTGGGAAATTGAGCCTGTTACTGCTCCATTTTTCATCTGTCCCCCACCGTTCTTCAGGTCAAAGCGGCCTAGGCAACCAGGAATGCCAGATGATGAATCCTCTGATCTAGATAACCTTTTTAAAAGGACAATGCCTTGGCTTGGTGATGATATGTGCATGAAGGATCCCCAGGTGCTACCTGGTCTAAGCTTAGTCCAGTGGATGAACATGCAGCAAAATTCTTCTGTGGCTAGCTCCATGCAGCCAAATTATATGCACCCTTCATTTTCTGGTTCTGTTATGCAAAACCTTGCTGGTGTAGATCTTTCTCGGCAGATGGGCTTGTCAGCGCCTCAATTACTTCAGCCGAATAATTTACAGTTCAATGCTCAGAGGTTACCTCAGCAAGTGCAACAGCTTGACCAACTACCAAAGATGCAGTCCACTGTGAACCCATTAGCATCCATGGTACAACGACAGCAACAGTTGGGTGATATGACACAAGTACCCAGGCAAAATTTGGTTAATCAAAGTCTACCGTCCAGCCAAGCTCAGTCCCCGCTTCTGCAACCTCAGTCCCTTGTCCAAGCTAACAGTATTCTTCAGCAGCAATCATCTACTCAAAATCAACTTCAAAGAAACCTTCCTCAGAACTTGCAGCAGCACCAACAACAACAACAACAACATCAACAGCAGCAGCAGCATCAACAACAAAATGTGGGTCAAAATCAACAGCAAAATTTTATTCAGACTCCACAGCCTGATCAAATGAATCAACAATTACACCATCTTTCTGATAATCAGCTTCAACTTCAACTATTACAGAAGCTTCAGCAGCACCAGCAATCATATTTCTCACAGCAGGCACTGCAACAACAGCCTACTCAACTTCTCCAGCTCCAGGACCAGCAGAGGCATCTGTTAGATGCGTCTCAGAGCTTCCCCAGGCCCTCAACTCCTAGCCAAATGCAAGATATGCCTCTTTCGGCACCGACCTCACATCCTCAGTCAAGAGCTATGCCACAGCAGATGACTGTTAATAATATTAGCCAACCTAATGGTCGGTTCTCGCATCCACAGCCGCAGCCAAAGCTTCAACAGCAGCAACCTGGTATGCTGGCTGAAATGTCTGGGCATATGGGACTTCCTCCAACTGGAACAACCAATCAGCTCTCTAGAGCTGGTAGCGGTATTATGGCAGGAGTTACAGGAGCAGGGCAGTCCGGGTTAACAGATGAGGTTCCATCATGTTCCACTTCACCCTCCACAAACAACTGTCCAACCATAATTCAACCATTGATGAACAACAGGGGCCATCGAAACTCATTAACTGGGGAGGACATGGCTCAGTCTGCCAACATGGTTATAAGCTCAAGTGCCTTGGAAACAATGCCATCTAATGTTAACTTAGTGAAAGGGTCTCAGCATAAGTCTGAAGTCAAGCCTTCAGTGAACATCACTAGGAATCAATGTCAAGGGATGCTTAACCCACAAACGTACCTGAATGGTGCAGCTGCCCAAACAGATTACGTGGACACTTCATCTTCAACAACTTCAGCTGGCCTCTCTCAGAATGATGTCCATTTACAGCACAATAATACCCCGTTGACTTTCAATCCACAGTCAATGTTGTTCAGAGAACCTAGTCAAGAAGTGGAAGTCCAGGTTGATCAGAGAAACAATGTTTCATATGGTTCTAACATTGATAGCCAATTGGGAATACCCTTGAGTTCTGATCCCTTGTTGGAAAAGGGCATGGTGGGGATAGGAAAGGATTTTACAAATAATCTCTCTTCAGGCATGCTTGGCAACTTTGAAAATTCAAAAGATGCTCAGCAGGAGCTTTCTTCTTCAATGGTTTCCCAGTCCTTTGGAGTTCCAGATATGACATTTCAGTCAATTGACTCCACTATAAATGACAGCAGTTTTCTGGACGGTGCCCCATGGGCACCAGCAGCACAATTTCAGCGGCTGCGGACATACACCAAGGTATACAAACGTGGAGCTGTTGGGAGATCTATAGATATTACACGCTATTCTGGTTATGATGAGCTCAAACATGATCTGGCTCGTCGGTTTGGCATAGAAGGACAGCTAGAGGACCGAGGGAGAGTAGGTTGGAAACTAGTTTATGTAGATCATGAGAATGATGTTCTGCTAGTTGGAGATGACCCTTGGGAGGAGTTTGTGAACTGTGTTCGGTGCATCAAGATTCTGTCCCCACAAGAAGTTCAGCAGATGAGCTTGGATGGAGATTTTGGGGGCAACGCAGTGCTTCCAAATCAAGCTTGCAGCAGCTCGGACGGTGGAAATGCCTAG

Protein Analysis

1125

Amino Acids

124.63

Weight (kDa)

6.26

Isoelectric Point (pI)

63.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B3 PF02362 134 - 236 1e-19 B3 DNA binding domain
ARF_AD PF06507 283 - 366 3e-34 Auxin response factor ancillary domain
AUX_IAA PF02309 1014 - 1097 2.3e-06 AUX/IAA family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2426
AarI CACCTGC 1 cut(s) 517
AasI GACNNNNNNGTC 1 cut(s) 2953
Acc36I ACCTGC 2 cut(s) 517, 1018
AccB1I GGYRCC 4 cut(s) 32, 2047, 2996, 3007
AccI GTMKAC 2 cut(s) 1594, 3051
AclWI GGATC 4 cut(s) 983, 1238, 1251, 2789
AcoI YGGCCR 1 cut(s) 132
AcsI RAATTY 6 cut(s) 213, 845, 1297, 1576, 1798, 2878
AcvI CACGTG 1 cut(s) 145
AcyI GRCGYC 1 cut(s) 33
AdeI CACNNNGTG 1 cut(s) 148
AfaI GTAC 8 cut(s) 152, 327, 869, 956, 964, 1530, 1566, 2558
AhdI GACNNNNNGTC 1 cut(s) 558
AhlI ACTAGT 1 cut(s) 3184
AjiI CACGTC 1 cut(s) 701
AjnI CCWGG 9 cut(s) 527, 1156, 1248, 1258, 1568, 1959, 2003, 2167, 2721
Alw21I GWGCWC 1 cut(s) 3114
Alw26I GTCTC 3 cut(s) 257, 1995, 2484
AlwI GGATC 4 cut(s) 983, 1238, 1251, 2789
AlwNI CAGNNNCTG 2 cut(s) 1927, 3031
AoxI GGCC 8 cut(s) 99, 110, 132, 163, 1145, 2006, 2371, 2620
ApoI RAATTY 6 cut(s) 213, 845, 1297, 1576, 1798, 2878
ArsI GACNNNNNNTTYG 4 cut(s) 1484, 1516, 1765, 1797
AspA2I CCTAGG 2 cut(s) 827, 1148
AspLEI GCGC 4 cut(s) 35, 107, 912, 1411
AspS9I GGNCC 8 cut(s) 110, 138, 280, 552, 1963, 2007, 2371, 3160
AsuC2I CCSGG 4 cut(s) 86, 109, 136, 2284
AsuHPI GGTGA 6 cut(s) 130, 259, 656, 1235, 1562, 2310
AsuNHI GCTAGC 1 cut(s) 1310
AvaII GGWCC 5 cut(s) 138, 280, 552, 1963, 3160
AvrII CCTAGG 2 cut(s) 827, 1148
BaeGI GKGCMC 2 cut(s) 3001, 3010
BaeI ACNNNNGTAYC 6 cut(s) 946, 979, 1548, 1581, 2540, 2573
BamHI GGATCC 1 cut(s) 1243
BanI GGYRCC 4 cut(s) 32, 2047, 2996, 3007
BanII GRGCYC 1 cut(s) 3114
BbrPI CACGTG 1 cut(s) 145
Bbv12I GWGCWC 1 cut(s) 3114
BbvCI CCTCAGC 1 cut(s) 1461
BccI CCATC 9 cut(s) 600, 847, 993, 1390, 1854, 2311, 2382, 2461, 3302
BceAI ACGGC 1 cut(s) 444
BcgI CGANNNNNNTGC 6 cut(s) 161, 195, 284, 318, 1031, 1065
BciT130I CCWGG 9 cut(s) 529, 1158, 1250, 1260, 1570, 1961, 2005, 2169, 2723
BclI TGATCA 2 cut(s) 1822, 2728
BcnI CCSGG 4 cut(s) 86, 109, 136, 2284
BcoDI GTCTC 3 cut(s) 257, 1995, 2484
BcuI ACTAGT 1 cut(s) 3184
BfmI CTRYAG 2 cut(s) 777, 3078
BfoI RGCGCY 2 cut(s) 36, 1412
BfuAI ACCTGC 2 cut(s) 517, 1018
BglI GCCNNNNNGGC 1 cut(s) 3005
BglII AGATCT 3 cut(s) 361, 1381, 3074
BlnI CCTAGG 2 cut(s) 827, 1148
BlpI GCTNAGC 1 cut(s) 2892
BmcAI AGTACT 1 cut(s) 869
Bme18I GGWCC 5 cut(s) 138, 280, 552, 1963, 3160
BmeRI GACNNNNNGTC 1 cut(s) 558
BmgBI CACGTC 1 cut(s) 701
BmgT120I GGNCC 8 cut(s) 110, 138, 280, 552, 1963, 2007, 2371, 3160
BmrI ACTGGG 2 cut(s) 2400, 2917
BmtI GCTAGC 1 cut(s) 1314
BmuI ACTGGG 2 cut(s) 2400, 2917
BplI GAGNNNNNCTC 2 cut(s) 1444, 1476
BpmI CTGGAG 2 cut(s) 1937, 1943
Bpu10I CCTNAGC 1 cut(s) 1461
Bpu1102I GCTNAGC 1 cut(s) 2892
BpuEI CTTGAG 4 cut(s) 144, 498, 2416, 2806
BpuMI CCSGG 4 cut(s) 86, 109, 136, 2284
BsaAI YACGTR 2 cut(s) 145, 2590
BsaBI GATNNNNATC 1 cut(s) 987
BsaHI GRCGYC 1 cut(s) 33
BsaI GGTCTC 1 cut(s) 2484
BsaWI WCCGGW 1 cut(s) 391
BsaXI ACNNNNNCTCC 4 cut(s) 54, 84, 3160, 3190
Bse118I RCCGGY 2 cut(s) 10, 130
Bse1I ACTGG 5 cut(s) 420, 1276, 2218, 2395, 2923
Bse8I GATNNNNATC 1 cut(s) 987
BseBI CCWGG 9 cut(s) 529, 1158, 1250, 1260, 1570, 1961, 2005, 2169, 2723
BseJI GATNNNNATC 1 cut(s) 987
BseNI ACTGG 5 cut(s) 420, 1276, 2218, 2395, 2923
BseRI GAGGAG 2 cut(s) 474, 3254
BseSI GKGCMC 2 cut(s) 3001, 3010
BseX3I CGGCCG 1 cut(s) 132
BseYI CCCAGC 1 cut(s) 1052
BsgI GTGCAG 2 cut(s) 483, 2589
Bsh1285I CGRYCG 1 cut(s) 135
BshFI GGCC 8 cut(s) 101, 112, 134, 165, 1147, 2008, 2373, 2622
BshNI GGYRCC 4 cut(s) 32, 2047, 2996, 3007
BsiEI CGRYCG 1 cut(s) 135
BsiHKAI GWGCWC 1 cut(s) 3114
BsiSI CCGG 9 cut(s) 11, 30, 51, 86, 108, 131, 135, 392, 2283
BslFI GGGAC 7 cut(s) 151, 1052, 1104, 1600, 1621, 2214, 3262
BsmAI GTCTC 3 cut(s) 257, 1995, 2484
BsmBI CGTCTC 1 cut(s) 1995
BsmFI GGGAC 7 cut(s) 151, 1052, 1104, 1600, 1621, 2214, 3262
BsmI GAATGC 1 cut(s) 1167
BsnI GGCC 8 cut(s) 101, 112, 134, 165, 1147, 2008, 2373, 2622
Bso31I GGTCTC 1 cut(s) 2484
Bsp1286I GDGCHC 3 cut(s) 3001, 3010, 3114
Bsp1720I GCTNAGC 1 cut(s) 2892
Bsp19I CCATGG 2 cut(s) 1524, 3002
BspANI GGCC 8 cut(s) 101, 112, 134, 165, 1147, 2008, 2373, 2622
BspHI TCATGA 1 cut(s) 3199
BspMAI CTGCAG 1 cut(s) 781
BspMI ACCTGC 2 cut(s) 517, 1018
BspOI GCTAGC 1 cut(s) 1314
BspPI GGATC 4 cut(s) 983, 1238, 1251, 2789
BspT107I GGYRCC 4 cut(s) 32, 2047, 2996, 3007
BspTNI GGTCTC 1 cut(s) 2484
BsrFI RCCGGY 2 cut(s) 10, 130
BsrI ACTGG 5 cut(s) 420, 1276, 2218, 2395, 2923
BssAI RCCGGY 2 cut(s) 10, 130
BssNAI GTATAC 1 cut(s) 3052
BssNI GRCGYC 1 cut(s) 33
BssT1I CCWWGG 8 cut(s) 827, 1148, 1214, 1524, 2439, 3002, 3045, 3233
Bst1107I GTATAC 1 cut(s) 3052
Bst2UI CCWGG 9 cut(s) 529, 1158, 1250, 1260, 1570, 1961, 2005, 2169, 2723
Bst6I CTCTTC 3 cut(s) 623, 930, 2857
BstACI GRCGYC 1 cut(s) 33
BstAPI GCANNNNNTGC 4 cut(s) 785, 884, 1927, 2035
BstBAI YACGTR 2 cut(s) 145, 2590
BstDSI CCRYGG 2 cut(s) 1524, 3002
BstEII GGTNACC 1 cut(s) 1455
BstH2I RGCGCY 2 cut(s) 36, 1412
BstHHI GCGC 4 cut(s) 35, 107, 912, 1411
BstMAI GTCTC 3 cut(s) 257, 1995, 2484
BstMCI CGRYCG 1 cut(s) 135
BstNI CCWGG 9 cut(s) 529, 1158, 1250, 1260, 1570, 1961, 2005, 2169, 2723
BstNSI RCATGY 5 cut(s) 278, 502, 910, 1291, 2863
BstPI GGTNACC 1 cut(s) 1455
BstSFI CTRYAG 2 cut(s) 777, 3078
BstSLI GKGCMC 2 cut(s) 3001, 3010
BstX2I RGATCY 4 cut(s) 361, 1243, 1381, 3074
BstXI CCANNNNNNTGG 2 cut(s) 2117, 2930
BstYI RGATCY 4 cut(s) 361, 1243, 1381, 3074
BstZ17I GTATAC 1 cut(s) 3052
BstZI CGGCCG 1 cut(s) 132
BsuRI GGCC 8 cut(s) 101, 112, 134, 165, 1147, 2008, 2373, 2622
BtgI CCRYGG 2 cut(s) 1524, 3002
BtrI CACGTC 1 cut(s) 701
BtsI GCAGTG 2 cut(s) 1925, 3336
BtsIMutI CAGTG 6 cut(s) 427, 1283, 1503, 1925, 2514, 3336
BveI ACCTGC 2 cut(s) 517, 1018
CaiI CAGNNNCTG 2 cut(s) 1927, 3031
CciI TCATGA 1 cut(s) 3199
CfoI GCGC 4 cut(s) 35, 107, 912, 1411
Cfr10I RCCGGY 2 cut(s) 10, 130
Cfr13I GGNCC 8 cut(s) 110, 138, 280, 552, 1963, 2007, 2371, 3160
CseI GACGC 2 cut(s) 353, 1977
CsiI ACCWGGT 2 cut(s) 1258, 2167
Csp6I GTAC 8 cut(s) 151, 326, 868, 955, 963, 1529, 1565, 2557
CviQI GTAC 8 cut(s) 151, 326, 868, 955, 963, 1529, 1565, 2557
DinI GGCGCC 1 cut(s) 34
DraI TTTAAA 1 cut(s) 1201
DraIII CACNNNGTG 1 cut(s) 148
DrdI GACNNNNNNGTC 1 cut(s) 2953
DriI GACNNNNNGTC 1 cut(s) 558
DseDI GACNNNNNNGTC 1 cut(s) 2953
EaeI YGGCCR 1 cut(s) 132
EagI CGGCCG 1 cut(s) 132
Eam1104I CTCTTC 3 cut(s) 623, 930, 2857
Eam1105I GACNNNNNGTC 1 cut(s) 558
EarI CTCTTC 3 cut(s) 623, 930, 2857
EciI GGCGGA 1 cut(s) 75
Ecl136II GAGCTC 1 cut(s) 3112
EclXI CGGCCG 1 cut(s) 132
Eco130I CCWWGG 8 cut(s) 827, 1148, 1214, 1524, 2439, 3002, 3045, 3233
Eco147I AGGCCT 1 cut(s) 101
Eco24I GRGCYC 1 cut(s) 3114
Eco31I GGTCTC 1 cut(s) 2484
Eco47I GGWCC 5 cut(s) 138, 280, 552, 1963, 3160
Eco52I CGGCCG 1 cut(s) 132
Eco53kI GAGCTC 1 cut(s) 3112
Eco72I CACGTG 1 cut(s) 145
Eco91I GGTNACC 1 cut(s) 1455
EcoICRI GAGCTC 1 cut(s) 3112
EcoO109I RGGNCCY 2 cut(s) 138, 2007
EcoO65I GGTNACC 1 cut(s) 1455
EcoRII CCWGG 9 cut(s) 527, 1156, 1248, 1258, 1568, 1959, 2003, 2167, 2721
EcoT14I CCWWGG 8 cut(s) 827, 1148, 1214, 1524, 2439, 3002, 3045, 3233
EcoT22I ATGCAT 1 cut(s) 759
EcoT38I GRGCYC 1 cut(s) 3114
EgeI GGCGCC 1 cut(s) 34
EheI GGCGCC 1 cut(s) 34
ErhI CCWWGG 8 cut(s) 827, 1148, 1214, 1524, 2439, 3002, 3045, 3233
Esp3I CGTCTC 1 cut(s) 1995
FalI AAGNNNNNCTT 2 cut(s) 2526, 2558
FaqI GGGAC 7 cut(s) 151, 1052, 1104, 1600, 1621, 2214, 3262
FauI CCCGC 2 cut(s) 464, 1626
FauNDI CATATG 2 cut(s) 2196, 2749
FbaI TGATCA 2 cut(s) 1822, 2728
FblI GTMKAC 2 cut(s) 1594, 3051
FriOI GRGCYC 1 cut(s) 3114
GlaI GCGC 4 cut(s) 34, 106, 911, 1410
GsaI CCCAGC 1 cut(s) 1056
GsuI CTGGAG 2 cut(s) 1937, 1943
HaeII RGCGCY 2 cut(s) 36, 1412
HaeIII GGCC 8 cut(s) 101, 112, 134, 165, 1147, 2008, 2373, 2622
HapII CCGG 9 cut(s) 11, 30, 51, 86, 108, 131, 135, 392, 2283
HgaI GACGC 2 cut(s) 353, 1977
HhaI GCGC 4 cut(s) 35, 107, 912, 1411
Hin1I GRCGYC 1 cut(s) 33
Hin6I GCGC 4 cut(s) 33, 105, 910, 1409
HinP1I GCGC 4 cut(s) 33, 105, 910, 1409
HincII GTYRAC 4 cut(s) 1047, 2289, 2464, 2667
HindII GTYRAC 4 cut(s) 1047, 2289, 2464, 2667
HindIII AAGCTT 4 cut(s) 1267, 1886, 2150, 3345
HinfI GANTC 8 cut(s) 938, 1043, 1175, 1810, 1831, 2524, 2963, 3271
HpaI GTTAAC 2 cut(s) 2289, 2464
HpaII CCGG 9 cut(s) 11, 30, 51, 86, 108, 131, 135, 392, 2283
HphI GGTGA 6 cut(s) 130, 259, 656, 1235, 1562, 2310
Hpy99I CGWCG 1 cut(s) 3135
HpyCH4IV ACGT 5 cut(s) 144, 700, 2555, 2589, 3058
HpySE526I ACGT 5 cut(s) 144, 700, 2555, 2589, 3058
Hsp92I GRCGYC 1 cut(s) 33
HspAI GCGC 4 cut(s) 33, 105, 910, 1409
KasI GGCGCC 1 cut(s) 32
KflI GGGWCCC 1 cut(s) 138
KroI GCCGGC 2 cut(s) 10, 130
KroNI GCCGGC 2 cut(s) 12, 132
Ksp22I TGATCA 2 cut(s) 1822, 2728
KspAI GTTAAC 2 cut(s) 2289, 2464
LmnI GCTCC 8 cut(s) 88, 609, 1108, 1319, 1962, 2270, 2899, 3062
MabI ACCWGGT 2 cut(s) 1258, 2167
MaeII ACGT 5 cut(s) 144, 700, 2555, 2589, 3058
MaeIII GTNAC 5 cut(s) 265, 746, 1096, 1455, 2263
MfeI CAATTG 2 cut(s) 2771, 2958
MflI RGATCY 4 cut(s) 361, 1243, 1381, 3074
MhlI GDGCHC 3 cut(s) 3001, 3010, 3114
Mly113I GGCGCC 1 cut(s) 33
MlyI GAGTC 4 cut(s) 947, 1052, 1804, 2957
MmeI TCCRAC 5 cut(s) 2234, 2363, 2784, 3158, 3202
Mph1103I ATGCAT 1 cut(s) 759
MroNI GCCGGC 2 cut(s) 10, 130
MseI TTAA 7 cut(s) 1200, 1584, 2097, 2288, 2387, 2463, 2544
MslI CAYNNNNRTG 1 cut(s) 3204
MspA1I CMGCKG 5 cut(s) 115, 467, 2573, 2618, 3028
MspI CCGG 9 cut(s) 11, 30, 51, 86, 108, 131, 135, 392, 2283
MunI CAATTG 2 cut(s) 2771, 2958
Mva1269I GAATGC 1 cut(s) 1167
MvaI CCWGG 9 cut(s) 529, 1158, 1250, 1260, 1570, 1961, 2005, 2169, 2723
NaeI GCCGGC 2 cut(s) 12, 132
NarI GGCGCC 1 cut(s) 33
NciI CCSGG 4 cut(s) 86, 109, 136, 2284
NcoI CCATGG 2 cut(s) 1524, 3002
NdeI CATATG 2 cut(s) 2196, 2749
NgoMIV GCCGGC 2 cut(s) 10, 130
NheI GCTAGC 1 cut(s) 1310
NmeAIII GCCGAG 1 cut(s) 1369
NmuCI GTSAC 2 cut(s) 265, 746
NsiI ATGCAT 1 cut(s) 759
NspI RCATGY 5 cut(s) 278, 502, 910, 1291, 2863
PaeI GCATGC 3 cut(s) 278, 910, 2863
PagI TCATGA 1 cut(s) 3199
PaqCI CACCTGC 1 cut(s) 517
PceI AGGCCT 1 cut(s) 101
PctI GAATGC 1 cut(s) 1167
PdiI GCCGGC 2 cut(s) 12, 132
PfeI GAWTC 4 cut(s) 1175, 1831, 2524, 3271
PfoI TCCNGGA 1 cut(s) 1959
PleI GAGTC 4 cut(s) 946, 1051, 1804, 2957
PluTI GGCGCC 1 cut(s) 36
PmaCI CACGTG 1 cut(s) 145
PmlI CACGTG 1 cut(s) 145
PpsI GAGTC 4 cut(s) 946, 1051, 1804, 2957
Ppu21I YACGTR 2 cut(s) 145, 2590
PpuMI RGGWCCY 1 cut(s) 138
PsiI TTATAA 1 cut(s) 2426
Psp124BI GAGCTC 1 cut(s) 3114
Psp5II RGGWCCY 1 cut(s) 138
Psp6I CCWGG 9 cut(s) 527, 1156, 1248, 1258, 1568, 1959, 2003, 2167, 2721
PspCI CACGTG 1 cut(s) 145
PspEI GGTNACC 1 cut(s) 1455
PspFI CCCAGC 1 cut(s) 1052
PspGI CCWGG 9 cut(s) 527, 1156, 1248, 1258, 1568, 1959, 2003, 2167, 2721
PspPI GGNCC 8 cut(s) 110, 138, 280, 552, 1963, 2007, 2371, 3160
PspPPI RGGWCCY 1 cut(s) 138
PstI CTGCAG 1 cut(s) 781
PstNI CAGNNNCTG 2 cut(s) 1927, 3031
PsuI RGATCY 4 cut(s) 361, 1243, 1381, 3074
PvuII CAGCTG 2 cut(s) 2573, 2618
RsaI GTAC 8 cut(s) 152, 327, 869, 956, 964, 1530, 1566, 2558
RsaNI GTAC 8 cut(s) 151, 326, 868, 955, 963, 1529, 1565, 2557
RseI CAYNNNNRTG 1 cut(s) 3204
SacI GAGCTC 1 cut(s) 3114
SaqAI TTAA 7 cut(s) 1200, 1584, 2097, 2288, 2387, 2463, 2544
Sau96I GGNCC 8 cut(s) 110, 138, 280, 552, 1963, 2007, 2371, 3160
ScaI AGTACT 1 cut(s) 869
SchI GAGTC 4 cut(s) 947, 1052, 1804, 2957
SduI GDGCHC 3 cut(s) 3001, 3010, 3114
SexAI ACCWGGT 2 cut(s) 1258, 2167
SfcI CTRYAG 2 cut(s) 777, 3078
SfoI GGCGCC 1 cut(s) 34
SinI GGWCC 5 cut(s) 138, 280, 552, 1963, 3160
SmiMI CAYNNNNRTG 1 cut(s) 3204
SmlI CTYRAG 4 cut(s) 159, 513, 2431, 2785
SmoI CTYRAG 4 cut(s) 159, 513, 2431, 2785
SpeI ACTAGT 1 cut(s) 3184
SphI GCATGC 3 cut(s) 278, 910, 2863
SseBI AGGCCT 1 cut(s) 101
SspDI GGCGCC 1 cut(s) 32
SspI AATATT 1 cut(s) 2104
SstI GAGCTC 1 cut(s) 3114
StuI AGGCCT 1 cut(s) 101
StyI CCWWGG 8 cut(s) 827, 1148, 1214, 1524, 2439, 3002, 3045, 3233
TaiI ACGT 5 cut(s) 147, 703, 2558, 2592, 3061
TaqI TCGA 1 cut(s) 2377
TaqII GACCGA 1 cut(s) 3177
TatI WGTACW 2 cut(s) 150, 867
TauI GCSGC 7 cut(s) 38, 41, 115, 130, 1147, 2143, 3031
TfiI GAWTC 4 cut(s) 1175, 1831, 2524, 3271
Tru1I TTAA 7 cut(s) 1200, 1584, 2097, 2288, 2387, 2463, 2544
Tru9I TTAA 7 cut(s) 1200, 1584, 2097, 2288, 2387, 2463, 2544
TscAI CASTG 6 cut(s) 427, 1283, 1510, 1932, 2514, 3336
TseFI GTSAC 2 cut(s) 265, 746
Tsp45I GTSAC 2 cut(s) 265, 746
TspGWI ACGGA 3 cut(s) 33, 305, 548
TspRI CASTG 6 cut(s) 427, 1283, 1510, 1932, 2514, 3336
VpaK11BI GGWCC 5 cut(s) 138, 280, 552, 1963, 3160
XapI RAATTY 6 cut(s) 213, 845, 1297, 1576, 1798, 2878
XbaI TCTAGA 2 cut(s) 1186, 2234
XceI RCATGY 5 cut(s) 278, 502, 910, 1291, 2863
XcmI CCANNNNNNNNNTGG 2 cut(s) 1256, 1576
XmaJI CCTAGG 2 cut(s) 827, 1148
XmiI GTMKAC 2 cut(s) 1594, 3051
ZrmI AGTACT 1 cut(s) 869
Zsp2I ATGCAT 1 cut(s) 759
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.