Rroxscaffold_1G00070390

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
91300189 .. 91314525
14337 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00070390.1

Sequence Viewer

Length: 2136 bp
ATGCATGAACGACAAGCGAAGCCCAACACGCGCTGGGGTGTCGTCGGAGTTACTGTTCAAGTTGCTCTGAGTCAGGAAACTGACCTGTCGAGTGACCGGGATAACGAAGACGCTAAGAAAAGCCTCTTTTCAAGTGCAGACACATCGGCTAATCTGAGAATTAGCAGCAATGCGAATCTGGAGCTTGTAGATGGGAAACAGAACTCTGTCTGGTCAACCATTGAAGAATCATCATCTAATAGTACTTCAGCTGTTGCAGTTCTTCTAGACACTGGAAACTTTGTCGTCAAAGATGATATGGGAGCTGATGAGTTTGTATGGCAGAGCTTTGATTATCCTTGTGACACTATGCTACCTGGCCAGCTGCTAGGATTTGATAGTAAATCCGGAAAGAGGTATGTCCTCACTAACTGGAAAAGTGATAATGATCCATCAATGGGTATATTCTCGTCTGGACTTTCAGCAGAGACACCATCACAAGTGTTTGTTTGGATTAACAATGAATCAACTCCTCACTACAGAAGTGGACCATGGGATAAATCAAAGTTCATTGGGGTAGTGGACAAGGATTCCCAGTGGCAGTATCTAAGTGGATATACTCTAGAGGATGATGTGAAGCAAGGAACGAAGTATTTGTCTTACTATAATTTAGTCGACAACATTACTGGATATACAGAGATGTCTTCAGATGGTTCAGTAAGGCTTATGTATTCAGAAAATGGCAAGAACTGGAGTGCTGTCTTGAAGATTTCAAATAATGCATGTGACATTTATGGAACTTGTGGACCTTTTGGGGTTTGCAAAGCTTCTGAGTCTCCAATCTGCAAGTGTTTGAAAGGGTTTGTACCCAAATTGGGCGACGAATGGAGCAAAGGGAACTGGACTGGAGGGTGTGTGAGGCAAACCAAATTGTTTTGTGAGAGACAAACAAATATCTCAGTGTCAACTACAGGAAAACAAGATGATGGGTTTTTGAAGATGGCAAGGTCCAAAGTACCAGATCATCATGTATATATTTCTTCTTTGGGCGATGCAGACACATTTGAAGACTGCAAGATGGTGTGCCTAAAAAATTGTTCTTGCTTAGCCTATGCATATGTTAATACTATAGGGTGCTTGCGCTGGTTCAATTACCTTATTGATATACAGGTGTTTCCCTCTGATGGAGAAGATCTATATATTCGCCTAGCACAATCTGAACTAGTTGAAGCAAAGCCAATAAAGTTAATTGCTAGCCTCACAGCTATTGGTTTTATGAGTTTGTTGGCTGCTATAGTTTTTGGTTTATACAGATTGCGTGCCAACCAAAAGGGTAAGAAAATGAAATGGTCTAGAGAAGGTCTTCTAGAATATATAGGAAAACATGATTCCTCGGAGCTCAAGATATATGATTTTGATAGCATACTAATCGCCACAGACAGCTTCAGCATCAAAAACAAACTCGGGCAAGGAGGCTTTGGCCCAGTTTATAAGGGAATGCTACCGGAAGGGAAGGAAATAGCAGTAAAAAGACTATCTAGTAGCTCAGGACAAGGTGTTGAGGAGTTCAAGAATGAGATGTTGTTGATCTCCGAGCTTCAACACAAAAATCTTGTTAGGATCATGGGTTGTTGTGTTACGGAGGATGAGAAGTTACTTATTTACGAGTTCATGCCGAACAAAAGCTTGGATACTTTTCTATTTGATCCGACGAAGAGAGCAGTGCTTGATTGGGCTACACGCTTTAATATTGTTCAGGGTGTAGCTAGAGGGCTTCTTTATCTCCATCATGATTCCTATTTGAAGATAATACACAGAGATCCGAAAGTCAGCAATATTCTCTTGGATGAGAAAATGAATCCTAAAATTTCAGATTTTGGATTGGCACGCATAGTTGAAGGAACACAAATTCTAGAAAATACTCGAGGGTGGTGGGAACACGAGTATGCCATGGGTGGAATATTTTCTGAAAAATCTGATGTCTACAGTTTTGGAGTTTTGGTATTGGAGATTATTAGCAGCAAGAAGACTGCCAGCTTTTATTTATATGACCAACAGCTAGGCTTTCTAGCCTATGCATGGAAGTTGTGGAAGGAAGACAAAGGATTGGAGTTAGTAGATGAAATACTGGGTGATTCATATTCCTCATCGAAGTAA

Protein Analysis

711

Amino Acids

79.7

Weight (kDa)

5.47

Isoelectric Point (pI)

39.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 46 - 139 2.7e-25 D-mannose binding lectin
S_locus_glycop PF00954 173 - 284 4.6e-27 S-locus glycoprotein domain
PAN_2 PF08276 319 - 382 1.3e-14 PAN-like domain
PK_Tyr_Ser-Thr PF07714 476 - 669 1.5e-40 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 476 - 669 2.1e-35 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1470
AccI GTMKAC 2 cut(s) 654, 1962
AccII CGCG 1 cut(s) 31
AccIII TCCGGA 1 cut(s) 386
AclWI GGATC 4 cut(s) 422, 1607, 1679, 1793
AcoI YGGCCR 1 cut(s) 358
AcsI RAATTY 2 cut(s) 1845, 1887
AcuI CTGAAG 3 cut(s) 231, 669, 1408
AfaI GTAC 3 cut(s) 244, 846, 996
AfiI CCNNNNNNNGG 5 cut(s) 393, 437, 854, 1163, 2058
AhlI ACTAGT 1 cut(s) 1201
AjnI CCWGG 1 cut(s) 355
AjuI GAANNNNNNNTTGG 2 cut(s) 1649, 1681
AloI GAACNNNNNNTCC 2 cut(s) 39, 71
Alw21I GWGCWC 1 cut(s) 1380
Alw26I GTCTC 3 cut(s) 461, 819, 916
AlwI GGATC 4 cut(s) 422, 1607, 1679, 1793
Ama87I CYCGRG 2 cut(s) 1442, 1902
Aor13HI TCCGGA 1 cut(s) 386
AoxI GGCC 2 cut(s) 358, 1459
ApeKI GCWGC 4 cut(s) 165, 364, 1268, 1998
ApoI RAATTY 2 cut(s) 1845, 1887
ArsI GACNNNNNNTTYG 2 cut(s) 620, 652
Asp700I GAANNNNTTC 2 cut(s) 1341, 1942
AspLEI GCGC 2 cut(s) 33, 1122
AspS9I GGNCC 4 cut(s) 527, 785, 987, 1460
AsuC2I CCSGG 1 cut(s) 98
AsuHPI GGTGA 1 cut(s) 2123
AsuNHI GCTAGC 1 cut(s) 1232
AvaI CYCGRG 2 cut(s) 1442, 1902
AvaII GGWCC 3 cut(s) 527, 785, 987
BalI TGGCCA 1 cut(s) 360
BanII GRGCYC 1 cut(s) 1380
BauI CACGAG 1 cut(s) 1919
BbsI GAAGAC 6 cut(s) 114, 675, 1053, 1334, 2012, 2082
Bbv12I GWGCWC 1 cut(s) 1380
BbvI GCAGC 4 cut(s) 177, 351, 1255, 2010
BccI CCATC 9 cut(s) 185, 439, 481, 683, 959, 973, 1051, 1157, 1773
BcgI CGANNNNNNTGC 4 cut(s) 126, 160, 1390, 1424
BciT130I CCWGG 1 cut(s) 357
BciVI GTATCC 1 cut(s) 1663
BcnI CCSGG 1 cut(s) 98
BcoDI GTCTC 3 cut(s) 461, 819, 916
BcuI ACTAGT 1 cut(s) 1201
BfmI CTRYAG 5 cut(s) 517, 948, 1107, 1272, 1963
BfuI GTATCC 1 cut(s) 1663
BglII AGATCT 1 cut(s) 1171
BisI GCNGC 4 cut(s) 166, 365, 1269, 1999
BlpI GCTNAGC 1 cut(s) 1084
BlsI GCNGC 4 cut(s) 167, 366, 1270, 2000
BmcAI AGTACT 1 cut(s) 244
Bme1390I CCNGG 2 cut(s) 98, 357
Bme18I GGWCC 3 cut(s) 527, 785, 987
BmeT110I CYCGRG 2 cut(s) 1442, 1902
BmgT120I GGNCC 4 cut(s) 527, 785, 987, 1460
BmrFI CCNGG 2 cut(s) 98, 357
BmrI ACTGGG 3 cut(s) 568, 1457, 2117
BmsI GCATC 2 cut(s) 1021, 1437
BmtI GCTAGC 1 cut(s) 1236
BmuI ACTGGG 3 cut(s) 568, 1457, 2117
BpiI GAAGAC 6 cut(s) 114, 675, 1053, 1334, 2012, 2082
BpmI CTGGAG 3 cut(s) 200, 751, 906
Bpu10I CCTNAGC 1 cut(s) 1525
Bpu1102I GCTNAGC 1 cut(s) 1084
BpuEI CTTGAG 1 cut(s) 1364
BpuMI CCSGG 1 cut(s) 98
BsaBI GATNNNNATC 1 cut(s) 426
BsaJI CCNNGG 3 cut(s) 530, 1371, 1929
BsaWI WCCGGW 2 cut(s) 386, 1483
BsaXI ACNNNNNCTCC 6 cut(s) 39, 69, 879, 909, 1965, 1995
Bsc4I CCNNNNNNNGG 5 cut(s) 393, 437, 854, 1163, 2058
Bse1I ACTGG 9 cut(s) 277, 416, 574, 670, 734, 884, 889, 1463, 2112
Bse3DI GCAATG 1 cut(s) 175
Bse8I GATNNNNATC 1 cut(s) 426
BseAI TCCGGA 1 cut(s) 386
BseBI CCWGG 1 cut(s) 357
BseDI CCNNGG 3 cut(s) 530, 1371, 1929
BseGI GGATG 3 cut(s) 613, 1630, 1831
BseJI GATNNNNATC 1 cut(s) 426
BseLI CCNNNNNNNGG 5 cut(s) 393, 437, 854, 1163, 2058
BseMI GCAATG 1 cut(s) 175
BseMII CTCAG 5 cut(s) 59, 146, 801, 951, 1539
BseNI ACTGG 9 cut(s) 277, 416, 574, 670, 734, 884, 889, 1463, 2112
BseRI GAGGAG 2 cut(s) 501, 1556
BseXI GCAGC 4 cut(s) 177, 351, 1255, 2010
BseYI CCCAGC 1 cut(s) 33
BsgI GTGCAG 1 cut(s) 156
Bsh1236I CGCG 1 cut(s) 31
BshFI GGCC 2 cut(s) 360, 1461
BsiHKAI GWGCWC 1 cut(s) 1380
BsiHKCI CYCGRG 2 cut(s) 1442, 1902
BsiSI CCGG 3 cut(s) 97, 387, 1484
BslI CCNNNNNNNGG 5 cut(s) 393, 437, 854, 1163, 2058
BsmAI GTCTC 3 cut(s) 461, 819, 916
BsmI GAATGC 1 cut(s) 1482
BsnI GGCC 2 cut(s) 360, 1461
BsoBI CYCGRG 2 cut(s) 1442, 1902
Bsp1286I GDGCHC 1 cut(s) 1380
Bsp13I TCCGGA 1 cut(s) 386
Bsp143I GATC 7 cut(s) 427, 1000, 1171, 1566, 1599, 1684, 1798
Bsp1720I GCTNAGC 1 cut(s) 1084
Bsp19I CCATGG 2 cut(s) 530, 1929
BspANI GGCC 2 cut(s) 360, 1461
BspCNI CTCAG 5 cut(s) 60, 147, 802, 950, 1538
BspEI TCCGGA 1 cut(s) 386
BspFNI CGCG 1 cut(s) 31
BspHI TCATGA 1 cut(s) 1768
BspOI GCTAGC 1 cut(s) 1236
BspPI GGATC 4 cut(s) 422, 1607, 1679, 1793
BsrDI GCAATG 1 cut(s) 175
BsrI ACTGG 9 cut(s) 277, 416, 574, 670, 734, 884, 889, 1463, 2112
BssECI CCNNGG 3 cut(s) 530, 1371, 1929
BssMI GATC 7 cut(s) 427, 1000, 1171, 1566, 1599, 1684, 1798
BssSI CACGAG 1 cut(s) 1919
BssT1I CCWWGG 2 cut(s) 530, 1929
Bst2BI CACGAG 1 cut(s) 1919
Bst2UI CCWGG 1 cut(s) 357
Bst4CI ACNGT 2 cut(s) 55, 1967
Bst6I CTCTTC 1 cut(s) 1688
BstC8I GCNNGC 6 cut(s) 362, 1118, 1234, 1299, 1867, 2014
BstDEI CTNAG 8 cut(s) 68, 114, 155, 587, 810, 937, 1084, 1525
BstDSI CCRYGG 2 cut(s) 530, 1929
BstF5I GGATG 3 cut(s) 613, 1630, 1831
BstFNI CGCG 1 cut(s) 31
BstHHI GCGC 2 cut(s) 33, 1122
BstKTI GATC 7 cut(s) 430, 1003, 1174, 1569, 1602, 1687, 1801
BstMAI GTCTC 3 cut(s) 461, 819, 916
BstMBI GATC 7 cut(s) 427, 1000, 1171, 1566, 1599, 1684, 1798
BstMWI GCNNNNNNNGC 1 cut(s) 28
BstNI CCWGG 1 cut(s) 357
BstNSI RCATGY 1 cut(s) 765
BstSCI CCNGG 2 cut(s) 96, 355
BstSFI CTRYAG 5 cut(s) 517, 948, 1107, 1272, 1963
BstUI CGCG 1 cut(s) 31
BstV1I GCAGC 4 cut(s) 177, 351, 1255, 2010
BstV2I GAAGAC 6 cut(s) 114, 675, 1053, 1334, 2012, 2082
BstX2I RGATCY 2 cut(s) 1171, 1798
BstYI RGATCY 2 cut(s) 1171, 1798
BsuI GTATCC 1 cut(s) 1663
BsuRI GGCC 2 cut(s) 360, 1461
BtgI CCRYGG 2 cut(s) 530, 1929
BtgZI GCGATG 1 cut(s) 1044
BtsCI GGATG 3 cut(s) 613, 1630, 1831
BtsI GCAGTG 1 cut(s) 1707
BtsIMutI CAGTG 4 cut(s) 270, 581, 945, 1707
Cac8I GCNNGC 6 cut(s) 362, 1118, 1234, 1299, 1867, 2014
CciI TCATGA 1 cut(s) 1768
CfoI GCGC 2 cut(s) 33, 1122
Cfr13I GGNCC 4 cut(s) 527, 785, 987, 1460
CseI GACGC 1 cut(s) 119
Csp6I GTAC 3 cut(s) 243, 845, 995
CviQI GTAC 3 cut(s) 243, 845, 995
DdeI CTNAG 8 cut(s) 68, 114, 155, 587, 810, 937, 1084, 1525
DpnI GATC 7 cut(s) 429, 1002, 1173, 1568, 1601, 1686, 1800
DpnII GATC 7 cut(s) 427, 1000, 1171, 1566, 1599, 1684, 1798
EaeI YGGCCR 1 cut(s) 358
Eam1104I CTCTTC 1 cut(s) 1688
EarI CTCTTC 1 cut(s) 1688
Ecl136II GAGCTC 1 cut(s) 1378
Eco130I CCWWGG 2 cut(s) 530, 1929
Eco24I GRGCYC 1 cut(s) 1380
Eco47I GGWCC 3 cut(s) 527, 785, 987
Eco53kI GAGCTC 1 cut(s) 1378
Eco57I CTGAAG 3 cut(s) 231, 669, 1408
Eco88I CYCGRG 2 cut(s) 1442, 1902
EcoICRI GAGCTC 1 cut(s) 1378
EcoRII CCWGG 1 cut(s) 355
EcoT14I CCWWGG 2 cut(s) 530, 1929
EcoT22I ATGCAT 4 cut(s) 6, 763, 1096, 2059
EcoT38I GRGCYC 1 cut(s) 1380
ErhI CCWWGG 2 cut(s) 530, 1929
FauNDI CATATG 1 cut(s) 1096
FblI GTMKAC 2 cut(s) 654, 1962
Fnu4HI GCNGC 4 cut(s) 166, 365, 1269, 1999
FokI GGATG 3 cut(s) 620, 1637, 1838
FriOI GRGCYC 1 cut(s) 1380
Fsp4HI GCNGC 4 cut(s) 166, 365, 1269, 1999
GlaI GCGC 2 cut(s) 32, 1121
GluI GCNGC 4 cut(s) 166, 365, 1269, 1999
GsaI CCCAGC 1 cut(s) 37
GsuI CTGGAG 3 cut(s) 200, 751, 906
HaeIII GGCC 2 cut(s) 360, 1461
HapII CCGG 3 cut(s) 97, 387, 1484
HgaI GACGC 1 cut(s) 119
HhaI GCGC 2 cut(s) 33, 1122
Hin6I GCGC 2 cut(s) 31, 1120
HinP1I GCGC 2 cut(s) 31, 1120
HincII GTYRAC 3 cut(s) 216, 655, 945
HindII GTYRAC 3 cut(s) 216, 655, 945
HindIII AAGCTT 2 cut(s) 804, 1663
HpaII CCGG 3 cut(s) 97, 387, 1484
HphI GGTGA 1 cut(s) 2123
Hpy166II GTNNAC 7 cut(s) 216, 527, 562, 655, 785, 945, 1963
Hpy8I GTNNAC 7 cut(s) 216, 527, 562, 655, 785, 945, 1963
Hpy99I CGWCG 3 cut(s) 47, 863, 1693
HpyAV CCTTC 5 cut(s) 1331, 1481, 1486, 1871, 2065
HpyCH4III ACNGT 2 cut(s) 55, 1967
HpyF10VI GCNNNNNNNGC 1 cut(s) 28
HpyF3I CTNAG 8 cut(s) 68, 114, 155, 587, 810, 937, 1084, 1525
HspAI GCGC 2 cut(s) 31, 1120
Kpn2I TCCGGA 1 cut(s) 386
Kzo9I GATC 7 cut(s) 427, 1000, 1171, 1566, 1599, 1684, 1798
LmnI GCTCC 4 cut(s) 181, 302, 867, 1375
Lsp1109I GCAGC 4 cut(s) 177, 351, 1255, 2010
LweI GCATC 2 cut(s) 1021, 1437
MaeIII GTNAC 6 cut(s) 49, 92, 341, 764, 1615, 1632
MalI GATC 7 cut(s) 429, 1002, 1173, 1568, 1601, 1686, 1800
MboI GATC 7 cut(s) 427, 1000, 1171, 1566, 1599, 1684, 1798
MflI RGATCY 2 cut(s) 1171, 1798
MhlI GDGCHC 1 cut(s) 1380
MlsI TGGCCA 1 cut(s) 360
MluCI AATT 9 cut(s) 159, 646, 851, 908, 1072, 1129, 1227, 1845, 1887
MluNI TGGCCA 1 cut(s) 360
MlyI GAGTC 2 cut(s) 79, 821
MmeI TCCRAC 2 cut(s) 25, 1712
Mox20I TGGCCA 1 cut(s) 360
Mph1103I ATGCAT 4 cut(s) 6, 763, 1096, 2059
MroI TCCGGA 1 cut(s) 386
MroXI GAANNNNTTC 2 cut(s) 1341, 1942
MscI TGGCCA 1 cut(s) 360
MseI TTAA 4 cut(s) 495, 1101, 1226, 1725
MslI CAYNNNNRTG 1 cut(s) 1923
Msp20I TGGCCA 1 cut(s) 360
MspA1I CMGCKG 2 cut(s) 251, 364
MspI CCGG 3 cut(s) 97, 387, 1484
MspR9I CCNGG 2 cut(s) 98, 357
Mva1269I GAATGC 1 cut(s) 1482
MvaI CCWGG 1 cut(s) 357
MvnI CGCG 1 cut(s) 31
MwoI GCNNNNNNNGC 1 cut(s) 28
NciI CCSGG 1 cut(s) 98
NcoI CCATGG 2 cut(s) 530, 1929
NdeI CATATG 1 cut(s) 1096
NdeII GATC 7 cut(s) 427, 1000, 1171, 1566, 1599, 1684, 1798
NheI GCTAGC 1 cut(s) 1232
NmuCI GTSAC 3 cut(s) 92, 341, 764
NsiI ATGCAT 4 cut(s) 6, 763, 1096, 2059
NspI RCATGY 1 cut(s) 765
PaeR7I CTCGAG 1 cut(s) 1902
PagI TCATGA 1 cut(s) 1768
PctI GAATGC 1 cut(s) 1482
PdmI GAANNNNTTC 2 cut(s) 1341, 1942
PfeI GAWTC 8 cut(s) 175, 227, 503, 569, 1367, 1772, 1837, 2114
PkrI GCNGC 4 cut(s) 167, 366, 1270, 2000
PleI GAGTC 2 cut(s) 78, 820
PpsI GAGTC 2 cut(s) 78, 820
PsiI TTATAA 1 cut(s) 1470
Psp124BI GAGCTC 1 cut(s) 1380
Psp6I CCWGG 1 cut(s) 355
PspFI CCCAGC 1 cut(s) 33
PspGI CCWGG 1 cut(s) 355
PspPI GGNCC 4 cut(s) 527, 785, 987, 1460
PspXI VCTCGAGB 1 cut(s) 1902
PsuI RGATCY 2 cut(s) 1171, 1798
PvuII CAGCTG 2 cut(s) 251, 364
RsaI GTAC 3 cut(s) 244, 846, 996
RsaNI GTAC 3 cut(s) 243, 845, 995
RseI CAYNNNNRTG 1 cut(s) 1923
SacI GAGCTC 1 cut(s) 1380
SalI GTCGAC 1 cut(s) 653
SaqAI TTAA 4 cut(s) 495, 1101, 1226, 1725
SatI GCNGC 4 cut(s) 166, 365, 1269, 1999
Sau3AI GATC 7 cut(s) 427, 1000, 1171, 1566, 1599, 1684, 1798
Sau96I GGNCC 4 cut(s) 527, 785, 987, 1460
ScaI AGTACT 1 cut(s) 244
SchI GAGTC 2 cut(s) 79, 821
ScrFI CCNGG 2 cut(s) 98, 357
SduI GDGCHC 1 cut(s) 1380
SfaNI GCATC 2 cut(s) 1021, 1437
SfcI CTRYAG 5 cut(s) 517, 948, 1107, 1272, 1963
Sfr274I CTCGAG 1 cut(s) 1902
SinI GGWCC 3 cut(s) 527, 785, 987
SlaI CTCGAG 1 cut(s) 1902
SmiMI CAYNNNNRTG 1 cut(s) 1923
SmlI CTYRAG 2 cut(s) 1379, 1902
SmoI CTYRAG 2 cut(s) 1379, 1902
SpeI ACTAGT 1 cut(s) 1201
Sse9I AATT 9 cut(s) 159, 646, 851, 908, 1072, 1129, 1227, 1845, 1887
SspI AATATT 3 cut(s) 1729, 1816, 1941
SstI GAGCTC 1 cut(s) 1380
StyD4I CCNGG 2 cut(s) 96, 355
StyI CCWWGG 2 cut(s) 530, 1929
TaaI ACNGT 2 cut(s) 55, 1967
TaqI TCGA 4 cut(s) 89, 654, 1903, 2129
TasI AATT 9 cut(s) 159, 646, 851, 908, 1072, 1129, 1227, 1845, 1887
TatI WGTACW 1 cut(s) 242
TfiI GAWTC 8 cut(s) 175, 227, 503, 569, 1367, 1772, 1837, 2114
Tru1I TTAA 4 cut(s) 495, 1101, 1226, 1725
Tru9I TTAA 4 cut(s) 495, 1101, 1226, 1725
TscAI CASTG 4 cut(s) 277, 581, 945, 1707
TseFI GTSAC 3 cut(s) 92, 341, 764
TseI GCWGC 4 cut(s) 165, 364, 1268, 1998
Tsp45I GTSAC 3 cut(s) 92, 341, 764
TspDTI ATGAA 8 cut(s) 21, 516, 538, 1337, 1639, 1850, 2106, 2115
TspGWI ACGGA 1 cut(s) 1634
TspRI CASTG 4 cut(s) 277, 581, 945, 1707
VpaK11BI GGWCC 3 cut(s) 527, 785, 987
XapI RAATTY 2 cut(s) 1845, 1887
XbaI TCTAGA 5 cut(s) 265, 601, 1331, 1345, 1891
XceI RCATGY 1 cut(s) 765
XhoI CTCGAG 1 cut(s) 1902
XmiI GTMKAC 2 cut(s) 654, 1962
XmnI GAANNNNTTC 2 cut(s) 1341, 1942
ZrmI AGTACT 1 cut(s) 244
Zsp2I ATGCAT 4 cut(s) 6, 763, 1096, 2059
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.