MD17G1249500.v1.1

Protein kinase domain

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Reverse (-)
29789849 .. 29793592
3744 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1249500.v1.1.491

Sequence Viewer

Length: 1077 bp
ATGAGAGCTAAGCAAAAAGGAGAAATCAAATTAACAAGGGACACCCTACAAGAATATATAGGAGGAAAACATGATGAGCTACTGATCTATGATTTTGAAACCATATTAGTTGCTACGGACAATTTCAGCACAGAAAACAAACTTGGGCAAGGAGGATTTGGTCCAGTTTATAAGGGTAAGCTAGCAGAAGGGAAGGAAATAGCGGTAAAAAGACTATCCAGTACCTCAGGACAAGGTGTAGTAGAGTTCAAGAATGAAATGTTGTTGATCTCCAATCTCCAACACAAAAATCTTGTCAGAATCATGGGTTGCTGCGTTAAAGAGGACGAGAAGTTACTGATTTATGAGTTCATGCCAAACAAAAGCTTGGATACTTTTCTTTTCGATTCGACGAGAAGAGCAGTGCTTGATTGGGGTACACGTTTCAATATTATTCAAGGTGTTGCTAGAGGGCTTGTTTATCTCCATCATGATTCCTATTTGAAGGTAATACATAGAGATCTAAAAGTGAGCAACATTCTCTTGGATGAGAAAATGAACCCAAAAATTTCAGATTTTGGATTGGCACGTGTGGTTGAAGGGACACAGAATTTAGAAAATACTCAGAGAATTGTGGGAACGCGTGGATATATATCTCCAGAGTATGCCATGGGTGGAATATTTTCTCAAAAATCTGATGTCTATAGCTTTGGGGTCTTGGTATTGGAGATTATTAGCAGCAAGAAGAATACTGCCTTCTTTATCTATGATCGACAGCTAGGCTTACTAGCCTATGCATGGCAGTTATGGAAGGAAGGCAGGGAATTGGAGTTGGTAGATGAAATGTTGGCGGCTGATTCATATTCGGCTCCAGAAGTAATGAAATGTGTGCATATAGGGCTGCTTTGTGTACAGGACAATCCGACGGATAGGCCGAGCATGCCGGATGTAATTTTTATGCTAAATGGTTCCACAAATGTAATTGGTGGTCCACAACCTAAACAGCCTCTATTCACAATCCAAAACTCAGTCTCTCATCCTCAACCACAGCCTTCGAATAATGACGCTACAATGACAATGATTAATGAAGGACGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

359

Amino Acids

40.28

Weight (kDa)

6.21

Isoelectric Point (pI)

34.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 43 - 242 6.8e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 44 - 311 9.3e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 171
AccII CGCG 1 cut(s) 622
AciI CCGC 2 cut(s) 203, 830
AcsI RAATTY 2 cut(s) 546, 589
AcvI CACGTG 1 cut(s) 569
AfaI GTAC 3 cut(s) 223, 418, 891
AfiI CCNNNNNNNGG 1 cut(s) 777
AflIII ACRYGT 3 cut(s) 419, 568, 620
AgsI TTSAA 6 cut(s) 98, 250, 427, 437, 484, 578
AjuI GAANNNNNNNTTGG 2 cut(s) 126, 158
AluBI AGCT 6 cut(s) 8, 79, 181, 366, 687, 757
AluI AGCT 6 cut(s) 8, 79, 181, 366, 687, 757
Alw26I GTCTC 1 cut(s) 1015
AoxI GGCC 1 cut(s) 911
ApeKI GCWGC 3 cut(s) 312, 717, 880
ApoI RAATTY 2 cut(s) 546, 589
ArsI GACNNNNNNTTYG 2 cut(s) 279, 311
AseI ATTAAT 1 cut(s) 1062
Asp700I GAANNNNTTC 1 cut(s) 661
AspS9I GGNCC 2 cut(s) 161, 968
AsuII TTCGAA 1 cut(s) 1034
AsuNHI GCTAGC 1 cut(s) 181
AvaII GGWCC 2 cut(s) 161, 968
AxyI CCTNAGG 1 cut(s) 226
BbrPI CACGTG 1 cut(s) 569
BbvI GCAGC 3 cut(s) 299, 729, 867
BccI CCATC 1 cut(s) 474
BciVI GTATCC 1 cut(s) 364
BcoDI GTCTC 1 cut(s) 1015
BfaI CTAG 4 cut(s) 182, 447, 758, 767
BfmI CTRYAG 1 cut(s) 682
BfuI GTATCC 1 cut(s) 364
BglII AGATCT 1 cut(s) 499
BisI GCNGC 4 cut(s) 313, 718, 831, 881
BlpI GCTNAGC 1 cut(s) 9
BlsI GCNGC 4 cut(s) 314, 719, 832, 882
Bme18I GGWCC 2 cut(s) 161, 968
BmgT120I GGNCC 2 cut(s) 161, 968
BmiI GGNNCC 2 cut(s) 849, 949
BmtI GCTAGC 1 cut(s) 185
BpmI CTGGAG 2 cut(s) 621, 834
Bpu1102I GCTNAGC 1 cut(s) 9
Bpu14I TTCGAA 1 cut(s) 1034
BsaAI YACGTR 1 cut(s) 569
BsaBI GATNNNNATC 1 cut(s) 631
BsaJI CCNNGG 1 cut(s) 648
Bsc4I CCNNNNNNNGG 1 cut(s) 777
Bse1I ACTGG 2 cut(s) 164, 219
Bse21I CCTNAGG 1 cut(s) 226
Bse8I GATNNNNATC 1 cut(s) 631
BseDI CCNNGG 1 cut(s) 648
BseGI GGATG 3 cut(s) 532, 931, 1015
BseJI GATNNNNATC 1 cut(s) 631
BseLI CCNNNNNNNGG 1 cut(s) 777
BseMII CTCAG 3 cut(s) 240, 617, 1020
BseNI ACTGG 2 cut(s) 164, 219
BseXI GCAGC 3 cut(s) 299, 729, 867
Bsh1236I CGCG 1 cut(s) 622
BshFI GGCC 1 cut(s) 913
BsiSI CCGG 1 cut(s) 923
BslFI GGGAC 2 cut(s) 53, 595
BslI CCNNNNNNNGG 1 cut(s) 777
BsmAI GTCTC 1 cut(s) 1015
BsmFI GGGAC 2 cut(s) 53, 595
BsnI GGCC 1 cut(s) 913
Bsp119I TTCGAA 1 cut(s) 1034
Bsp1407I TGTACA 1 cut(s) 889
Bsp143I GATC 4 cut(s) 84, 267, 499, 748
Bsp1720I GCTNAGC 1 cut(s) 9
Bsp19I CCATGG 1 cut(s) 648
BspACI CCGC 2 cut(s) 203, 830
BspANI GGCC 1 cut(s) 913
BspCNI CTCAG 3 cut(s) 239, 616, 1019
BspFNI CGCG 1 cut(s) 622
BspHI TCATGA 1 cut(s) 469
BspLI GGNNCC 2 cut(s) 849, 949
BspOI GCTAGC 1 cut(s) 185
BspQI GCTCTTC 1 cut(s) 391
BspT104I TTCGAA 1 cut(s) 1034
BsrGI TGTACA 1 cut(s) 889
BsrI ACTGG 2 cut(s) 164, 219
BssECI CCNNGG 1 cut(s) 648
BssMI GATC 4 cut(s) 84, 267, 499, 748
BssT1I CCWWGG 1 cut(s) 648
Bst6I CTCTTC 1 cut(s) 391
BstAUI TGTACA 1 cut(s) 889
BstBAI YACGTR 1 cut(s) 569
BstBI TTCGAA 1 cut(s) 1034
BstC8I GCNNGC 2 cut(s) 183, 920
BstDEI CTNAG 4 cut(s) 9, 226, 603, 1006
BstDSI CCRYGG 1 cut(s) 648
BstF5I GGATG 3 cut(s) 532, 931, 1015
BstFNI CGCG 1 cut(s) 622
BstKTI GATC 4 cut(s) 87, 270, 502, 751
BstMAI GTCTC 1 cut(s) 1015
BstMBI GATC 4 cut(s) 84, 267, 499, 748
BstMWI GCNNNNNNNGC 2 cut(s) 877, 919
BstNSI RCATGY 1 cut(s) 922
BstSFI CTRYAG 1 cut(s) 682
BstUI CGCG 1 cut(s) 622
BstV1I GCAGC 3 cut(s) 299, 729, 867
BstX2I RGATCY 1 cut(s) 499
BstYI RGATCY 1 cut(s) 499
Bsu36I CCTNAGG 1 cut(s) 226
BsuI GTATCC 1 cut(s) 364
BsuRI GGCC 1 cut(s) 913
BtgI CCRYGG 1 cut(s) 648
BtsCI GGATG 3 cut(s) 532, 931, 1015
BtsI GCAGTG 1 cut(s) 408
BtsIMutI CAGTG 1 cut(s) 408
Cac8I GCNNGC 2 cut(s) 183, 920
CciI TCATGA 1 cut(s) 469
Cfr13I GGNCC 2 cut(s) 161, 968
CseI GACGC 1 cut(s) 1052
Csp6I GTAC 3 cut(s) 222, 417, 890
CviAII CATG 7 cut(s) 71, 304, 352, 470, 649, 777, 919
CviQI GTAC 3 cut(s) 222, 417, 890
DdeI CTNAG 4 cut(s) 9, 226, 603, 1006
DpnI GATC 4 cut(s) 86, 269, 501, 750
DpnII GATC 4 cut(s) 84, 267, 499, 748
Eam1104I CTCTTC 1 cut(s) 391
EarI CTCTTC 1 cut(s) 391
Eco130I CCWWGG 1 cut(s) 648
Eco47I GGWCC 2 cut(s) 161, 968
Eco72I CACGTG 1 cut(s) 569
Eco81I CCTNAGG 1 cut(s) 226
EcoT14I CCWWGG 1 cut(s) 648
EcoT22I ATGCAT 1 cut(s) 778
ErhI CCWWGG 1 cut(s) 648
FaeI CATG 7 cut(s) 74, 307, 355, 473, 652, 780, 922
FaqI GGGAC 2 cut(s) 53, 595
FatI CATG 7 cut(s) 70, 303, 351, 469, 648, 776, 918
Fnu4HI GCNGC 4 cut(s) 313, 718, 831, 881
FokI GGATG 3 cut(s) 539, 938, 1002
Fsp4HI GCNGC 4 cut(s) 313, 718, 831, 881
FspBI CTAG 4 cut(s) 182, 447, 758, 767
GluI GCNGC 4 cut(s) 313, 718, 831, 881
GsuI CTGGAG 2 cut(s) 621, 834
HaeIII GGCC 1 cut(s) 913
HapII CCGG 1 cut(s) 923
HgaI GACGC 1 cut(s) 1052
Hin1II CATG 7 cut(s) 74, 307, 355, 473, 652, 780, 922
HindIII AAGCTT 1 cut(s) 364
HinfI GANTC 4 cut(s) 300, 386, 473, 836
HpaII CCGG 1 cut(s) 923
Hpy166II GTNNAC 3 cut(s) 419, 890, 971
Hpy188I TCNGA 5 cut(s) 299, 553, 606, 676, 903
Hpy188III TCNNGA 5 cut(s) 228, 250, 470, 638, 851
Hpy8I GTNNAC 3 cut(s) 419, 890, 971
Hpy99I CGWCG 2 cut(s) 394, 907
HpyAV CCTTC 9 cut(s) 182, 187, 478, 572, 745, 784, 788, 1041, 1061
HpyCH4IV ACGT 2 cut(s) 421, 568
HpyCH4V TGCA 2 cut(s) 776, 871
HpyF10VI GCNNNNNNNGC 2 cut(s) 877, 919
HpyF3I CTNAG 4 cut(s) 9, 226, 603, 1006
HpySE526I ACGT 2 cut(s) 421, 568
Hsp92II CATG 7 cut(s) 74, 307, 355, 473, 652, 780, 922
Kzo9I GATC 4 cut(s) 84, 267, 499, 748
LguI GCTCTTC 1 cut(s) 391
LmnI GCTCC 1 cut(s) 853
LpnPI CCDG 8 cut(s) 177, 213, 232, 651, 784, 864, 878, 936
Lsp1109I GCAGC 3 cut(s) 299, 729, 867
MaeI CTAG 4 cut(s) 182, 447, 758, 767
MaeII ACGT 2 cut(s) 421, 568
MaeIII GTNAC 1 cut(s) 333
MalI GATC 4 cut(s) 86, 269, 501, 750
MboI GATC 4 cut(s) 84, 267, 499, 748
MboII GAAGA 2 cut(s) 408, 736
MflI RGATCY 1 cut(s) 499
MluCI AATT 8 cut(s) 29, 121, 546, 589, 609, 803, 930, 960
MluI ACGCGT 1 cut(s) 620
MmeI TCCRAC 2 cut(s) 304, 926
MnlI CCTC 7 cut(s) 56, 146, 235, 316, 443, 996, 1029
Mph1103I ATGCAT 1 cut(s) 778
MroXI GAANNNNTTC 1 cut(s) 661
MseI TTAA 3 cut(s) 32, 318, 1062
MspI CCGG 1 cut(s) 923
MvnI CGCG 1 cut(s) 622
MwoI GCNNNNNNNGC 2 cut(s) 877, 919
NcoI CCATGG 1 cut(s) 648
NdeII GATC 4 cut(s) 84, 267, 499, 748
NheI GCTAGC 1 cut(s) 181
NlaIII CATG 7 cut(s) 74, 307, 355, 473, 652, 780, 922
NlaIV GGNNCC 2 cut(s) 849, 949
NmeAIII GCCGAG 1 cut(s) 939
NsiI ATGCAT 1 cut(s) 778
NspI RCATGY 1 cut(s) 922
NspV TTCGAA 1 cut(s) 1034
PaeI GCATGC 1 cut(s) 922
PagI TCATGA 1 cut(s) 469
PciSI GCTCTTC 1 cut(s) 391
PcsI WCGNNNNNNNCGW 1 cut(s) 911
PdmI GAANNNNTTC 1 cut(s) 661
PfeI GAWTC 4 cut(s) 300, 386, 473, 836
PkrI GCNGC 4 cut(s) 314, 719, 832, 882
PmaCI CACGTG 1 cut(s) 569
PmlI CACGTG 1 cut(s) 569
Ppu21I YACGTR 1 cut(s) 569
PshBI ATTAAT 1 cut(s) 1062
PsiI TTATAA 1 cut(s) 171
PspCI CACGTG 1 cut(s) 569
PspN4I GGNNCC 2 cut(s) 849, 949
PspPI GGNCC 2 cut(s) 161, 968
PsuI RGATCY 1 cut(s) 499
RsaI GTAC 3 cut(s) 223, 418, 891
RsaNI GTAC 3 cut(s) 222, 417, 890
SapI GCTCTTC 1 cut(s) 391
SaqAI TTAA 3 cut(s) 32, 318, 1062
SatI GCNGC 4 cut(s) 313, 718, 831, 881
Sau3AI GATC 4 cut(s) 84, 267, 499, 748
Sau96I GGNCC 2 cut(s) 161, 968
SfcI CTRYAG 1 cut(s) 682
SfuI TTCGAA 1 cut(s) 1034
SinI GGWCC 2 cut(s) 161, 968
SphI GCATGC 1 cut(s) 922
Sse9I AATT 8 cut(s) 29, 121, 546, 589, 609, 803, 930, 960
SsiI CCGC 2 cut(s) 203, 830
SspI AATATT 2 cut(s) 430, 660
SspMI CTAG 4 cut(s) 182, 447, 758, 767
StyI CCWWGG 1 cut(s) 648
TaiI ACGT 2 cut(s) 424, 571
TaqI TCGA 4 cut(s) 384, 389, 751, 1034
TasI AATT 8 cut(s) 29, 121, 546, 589, 609, 803, 930, 960
TatI WGTACW 1 cut(s) 889
TauI GCSGC 1 cut(s) 833
TfiI GAWTC 4 cut(s) 300, 386, 473, 836
Tru1I TTAA 3 cut(s) 32, 318, 1062
Tru9I TTAA 3 cut(s) 32, 318, 1062
TscAI CASTG 1 cut(s) 408
TseI GCWGC 3 cut(s) 312, 717, 880
TspDTI ATGAA 6 cut(s) 270, 340, 551, 828, 834, 875
TspGWI ACGGA 2 cut(s) 131, 920
TspRI CASTG 1 cut(s) 408
VpaK11BI GGWCC 2 cut(s) 161, 968
VspI ATTAAT 1 cut(s) 1062
XapI RAATTY 2 cut(s) 546, 589
XceI RCATGY 1 cut(s) 922
XmnI GAANNNNTTC 1 cut(s) 661
XspI CTAG 4 cut(s) 182, 447, 758, 767
Zsp2I ATGCAT 1 cut(s) 778
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.