Rh5CG050500

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Reverse (-)
3597669 .. 3603542
5874 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG050500.1

Sequence Viewer

Length: 324 bp
ATGCCGACATATCTTCTGAAGGCATGGAAGTTATGGAATGAAGGCAGGGCGTTGGATTTAGTAGAAGAAGTATTGGGTAATTCATATTCCTCATCAGAAGTAATGACATGCGTGCATGTTGGGCTTCTTTGTGTACAGGACAATGCTGCGGATAGACCAACCATGACAAATGTAGCTTCAATTCTAAGCAGCGAGAAAGATAGTTCACATCCAAAGAGGCATGTATTCACTATCCAAAACTCAATTTATCATCCAGGGTCATCCTATGAAAATACAAATTCCTCCAGAAATGAAGCTAGCATTACAATGATTGAAGGACGTTAA

Protein Analysis

107

Amino Acids

11.92

Weight (kDa)

5.73

Isoelectric Point (pI)

43.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 149
AcsI RAATTY 1 cut(s) 277
AcuI CTGAAG 1 cut(s) 38
AfaI GTAC 1 cut(s) 135
AgsI TTSAA 2 cut(s) 180, 314
AjnI CCWGG 1 cut(s) 253
AluBI AGCT 2 cut(s) 176, 296
AluI AGCT 2 cut(s) 176, 296
ApeKI GCWGC 2 cut(s) 146, 189
ApoI RAATTY 1 cut(s) 277
AsuNHI GCTAGC 1 cut(s) 296
BbvI GCAGC 2 cut(s) 133, 201
BciT130I CCWGG 1 cut(s) 255
BfaI CTAG 1 cut(s) 297
BisI GCNGC 2 cut(s) 147, 190
BlsI GCNGC 2 cut(s) 148, 191
Bme1390I CCNGG 1 cut(s) 255
BmrFI CCNGG 1 cut(s) 255
BmtI GCTAGC 1 cut(s) 300
BpmI CTGGAG 1 cut(s) 268
BsaJI CCNNGG 1 cut(s) 254
BseBI CCWGG 1 cut(s) 255
BseDI CCNNGG 1 cut(s) 254
BseGI GGATG 3 cut(s) 208, 250, 260
BseXI GCAGC 2 cut(s) 133, 201
Bsp1407I TGTACA 1 cut(s) 133
BspACI CCGC 1 cut(s) 149
BspOI GCTAGC 1 cut(s) 300
BsrGI TGTACA 1 cut(s) 133
BssECI CCNNGG 1 cut(s) 254
Bst2UI CCWGG 1 cut(s) 255
BstAUI TGTACA 1 cut(s) 133
BstC8I GCNNGC 2 cut(s) 113, 298
BstDEI CTNAG 1 cut(s) 185
BstF5I GGATG 3 cut(s) 208, 250, 260
BstMWI GCNNNNNNNGC 1 cut(s) 121
BstNI CCWGG 1 cut(s) 255
BstNSI RCATGY 3 cut(s) 111, 119, 224
BstSCI CCNGG 1 cut(s) 253
BstV1I GCAGC 2 cut(s) 133, 201
BtsCI GGATG 3 cut(s) 208, 250, 260
Cac8I GCNNGC 2 cut(s) 113, 298
Csp6I GTAC 1 cut(s) 134
CviAII CATG 5 cut(s) 24, 108, 116, 163, 221
CviJI RGCY 3 cut(s) 124, 176, 296
CviKI_1 RGCY 3 cut(s) 124, 176, 296
CviQI GTAC 1 cut(s) 134
DdeI CTNAG 1 cut(s) 185
Eco57I CTGAAG 1 cut(s) 38
EcoRII CCWGG 1 cut(s) 253
FaeI CATG 5 cut(s) 27, 111, 119, 166, 224
FaiI YATR 9 cut(s) 10, 25, 34, 85, 109, 117, 164, 222, 267
FatI CATG 5 cut(s) 23, 107, 115, 162, 220
Fnu4HI GCNGC 2 cut(s) 147, 190
FokI GGATG 3 cut(s) 195, 237, 247
Fsp4HI GCNGC 2 cut(s) 147, 190
FspBI CTAG 1 cut(s) 297
GluI GCNGC 2 cut(s) 147, 190
GsuI CTGGAG 1 cut(s) 268
Hin1II CATG 5 cut(s) 27, 111, 119, 166, 224
Hpy166II GTNNAC 2 cut(s) 134, 206
Hpy188I TCNGA 2 cut(s) 18, 97
Hpy188III TCNNGA 1 cut(s) 285
Hpy8I GTNNAC 2 cut(s) 134, 206
HpyAV CCTTC 3 cut(s) 13, 35, 308
HpyCH4IV ACGT 1 cut(s) 319
HpyCH4V TGCA 1 cut(s) 115
HpyF10VI GCNNNNNNNGC 1 cut(s) 121
HpyF3I CTNAG 1 cut(s) 185
HpySE526I ACGT 1 cut(s) 319
Hsp92II CATG 5 cut(s) 27, 111, 119, 166, 224
LpnPI CCDG 5 cut(s) 31, 122, 240, 267, 298
Lsp1109I GCAGC 2 cut(s) 133, 201
MaeI CTAG 1 cut(s) 297
MaeII ACGT 1 cut(s) 319
MboII GAAGA 2 cut(s) 5, 77
MluCI AATT 4 cut(s) 79, 180, 243, 277
MmeI TCCRAC 1 cut(s) 33
MnlI CCTC 3 cut(s) 100, 210, 292
MseI TTAA 1 cut(s) 322
MslI CAYNNNNRTG 1 cut(s) 305
MspR9I CCNGG 1 cut(s) 255
MvaI CCWGG 1 cut(s) 255
MwoI GCNNNNNNNGC 1 cut(s) 121
NheI GCTAGC 1 cut(s) 296
NlaIII CATG 5 cut(s) 27, 111, 119, 166, 224
NspI RCATGY 3 cut(s) 111, 119, 224
PkrI GCNGC 2 cut(s) 148, 191
Psp6I CCWGG 1 cut(s) 253
PspGI CCWGG 1 cut(s) 253
RsaI GTAC 1 cut(s) 135
RsaNI GTAC 1 cut(s) 134
RseI CAYNNNNRTG 1 cut(s) 305
SaqAI TTAA 1 cut(s) 322
SatI GCNGC 2 cut(s) 147, 190
ScrFI CCNGG 1 cut(s) 255
SetI ASST 3 cut(s) 178, 298, 322
SmiMI CAYNNNNRTG 1 cut(s) 305
Sse9I AATT 4 cut(s) 79, 180, 243, 277
SsiI CCGC 1 cut(s) 149
SspMI CTAG 1 cut(s) 297
StyD4I CCNGG 1 cut(s) 253
TaiI ACGT 1 cut(s) 322
TasI AATT 4 cut(s) 79, 180, 243, 277
TatI WGTACW 1 cut(s) 133
Tru1I TTAA 1 cut(s) 322
Tru9I TTAA 1 cut(s) 322
TseI GCWGC 2 cut(s) 146, 189
TspDTI ATGAA 4 cut(s) 54, 72, 282, 306
XapI RAATTY 1 cut(s) 277
XceI RCATGY 3 cut(s) 111, 119, 224
XspI CTAG 1 cut(s) 297
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.