Rroxscaffold_6G00389560

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
Physical Location & Seq
Forward (+)
3357882 .. 3365512
7631 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00389560.1

Sequence Viewer

Length: 2253 bp
ATGATGATCGCGAACCTTTCCTCGGAGGTCGCTCCCTTCGGAATAGGCTTCGCGACGAAAGCCTCTCCTTCTCAACTTTCCACCGTAGCGAGAGATAGCAGTAGTGACGAGCTCACCGGCACGGTTAGTGGTGACACTCGACCCTCGCAGCGGTCGGGTGATTCTCTTCCCTTTCAATTACCATATCGGGTGATTGGGAATCGGAGAGAATCTCTCGAGTCACTTGTTCTTCGTAAAGACCACGACGATCCGCACGAGTATGCGGTGCATGAATCGAAGAATGGTATGGTCCTAACACCCCAAAGATTGTCGGGAGAAGAGCTTCGTCCGAGTGGAGGAGGTTTGGTTAGACCTTCACAACCGAGGCACAAGACTTTGAATTGCTACAATTTAAATGATGATGGGTTTTTGAAGATGGTAAGGCTAAAAGCACCAGGTTTGCATGAATTCTATATTTCTTTCGGTGCTCCAGACACATCTGAAAACTGCAAGATCCGATGCCTAAATAACTGTTCTTGTCTGGTCAAAGATCTTATTGATATACAAGAGTTTTCTTCTGGTGGAGGAGATGTTTTTATTCGCACAGCACGAGCAGAACTGGGAAAAATCAGAGTAAAAACAGGGAAGTATGCATTGGCTGATAAGATTCAGACTTCACGAGACACTTTACGAGAGTATATTGGAAAAGATGATCCATCTGATGAGCTATTGATCTATGATTTTGATAGTGTATTAGTTGCTACAAACAATTTCAGTCTCGCAAACAAACTCGGGCAAGGGGATTTGGCCGGTAAGCTACTCGAAGGGAAGGAAATAGCAGTGAAAAGACTATCTAGTAGCTTGGCTCAGGCCAAGGCAAAGAAGAGGTCAAGAATGAGACATCCAATGAGGAGAGCACCATTGGATTGGCCTTGCTGTTTCAATATTATTCAGGGCGTTGCTAGAGGGGTTCTTTATCTCCATCACGATTCCTGTTTGAAAGTAATACATAGAGATCTGAAAGTTTGCAACATTCTCTGGTATGAGAAAATGAACGCAAAAATTTCAGATTTTGGATTGGCACGTATTGTTCAAGAGACACCGGATTTAGAAAATACTCAGAGGGTTGTGGAAACTCTATGTACACTCTTTGTTGCATTTCATAAGGTTAGAAAGCAAGAAAGCAACTTCTGCGACATACTAATGAGTTTCCTGGGTAGAGGTTATATGTCTCCGGAGTATGCCATGGGCGGGATATTTTCCAAGAAGTCAGATGTCTACAGCTACGGGGTCTTAGTATGGAACTTATGGAATGAAGGCAGTGGATTGGCACTGGTTGATGAAGTATTGGGTGATTCATATTCCTCCTCAGAAGTAATGAGATGTGTGCACATTGGGCTTCTTTGTGTACGGGACAATGTTGCGGATAGACCAACCATGGCAGATGTAGTTCTCATGCTAAGTAGTAAGACAGATGGTCCCCAACCTAAGGAGCCTATATTCACCATCCTGTATTCGACCATGCCAGTTATTCGTCCTCAACCACGCGCAGGGACAAACTCTAGTTTCCCCGGCCACATTTTTGAGTTAGGCTTCTTCAGTCCTAATAACTCTGCTAACAAGTATGCGGGGATATGGCTCAGGGATATATCTCCGAGGAAAGTTGTATGGGTGGCCAATAGAGAAAAGCATCTTGCAGGTGCAAACACCTTGGCTAGATTAACAATTAGTATCAATGGGAATCTGGAACTTGTAGATGGGAAGCAGAATGCTGTGTGGTCAACCAAGGTGACTATTCCAGTGTCATCATTCAACGCTAGTCCAGCAGCAGTTCTGTTGGAAAACGGAAACTTCCTTGTCCGAGATCATATGGGAGCTGATCATTTCATATGGCGGAGTTTTGATTATCCTGGTGACACAATGCTGTCTAACATGGTGCTGGGAGACAATAGAAAATCTGGAAAGAGCAGTATCTTGACAGCCTGGAAAAATGAGAATGATCCATCCACTGGGATATTCTCGGCTGCAGGTGGATTGGTAAAGGAGATGCCAGGACAAGTAATCAAATGGATGAATCGATCAACTCCCTACTGGAAAAGTGGGCCATGGGATAAATCAAAGTTCATCGGCGTACATGATATGGATAACCAATATCTAAATGGATTTGAGCTAGATGAGCATGTGGAACAGGGAACTATTTCTTTCATTTATAGAGTGTTTGATGAAACTCTCACATATACCAGAAGGAAAGCTCAAGCTCATGCATTCAGATAA

Protein Analysis

750

Amino Acids

83.65

Weight (kDa)

8.67

Isoelectric Point (pI)

41.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 298 - 364 2.3e-10 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 306 - 431 1.1e-15 Protein kinase domain
B_lectin PF01453 548 - 656 3.1e-26 D-mannose binding lectin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1667, 1997
Acc36I ACCTGC 2 cut(s) 1667, 1997
AccB7I CCANNNNNTGG 1 cut(s) 1988
AccI GTMKAC 1 cut(s) 1257
AccII CGCG 3 cut(s) 11, 53, 1527
AccIII TCCGGA 1 cut(s) 1213
AciI CCGC 7 cut(s) 151, 251, 263, 1230, 1403, 1607, 1873
AclWI GGATC 4 cut(s) 242, 487, 686, 1973
AcoI YGGCCR 3 cut(s) 786, 1552, 1653
AcsI RAATTY 2 cut(s) 446, 1041
AcuI CTGAAG 1 cut(s) 1561
AfaI GTAC 3 cut(s) 1123, 1389, 2112
AfiI CCNNNNNNNGG 7 cut(s) 22, 150, 335, 1230, 1468, 1529, 1988
AgsI TTSAA 7 cut(s) 176, 379, 412, 922, 979, 1073, 1792
AhdI GACNNNNNGTC 1 cut(s) 1455
AjnI CCWGG 5 cut(s) 433, 1191, 1888, 1961, 2029
AjuI GAANNNNNNNTTGG 2 cut(s) 617, 649
Alw21I GWGCWC 4 cut(s) 114, 469, 898, 1371
Alw26I GTCTC 6 cut(s) 654, 761, 871, 1070, 1215, 1917
Alw44I GTGCAC 1 cut(s) 1367
AlwI GGATC 4 cut(s) 242, 487, 686, 1973
Ama87I CYCGRG 2 cut(s) 215, 770
Aor13HI TCCGGA 1 cut(s) 1213
AoxI GGCC 6 cut(s) 786, 849, 908, 1552, 1653, 2081
ApaLI GTGCAC 1 cut(s) 1367
ApeKI GCWGC 3 cut(s) 148, 1805, 2003
ApoI RAATTY 2 cut(s) 446, 1041
ArsI GACNNNNNNTTYG 2 cut(s) 851, 883
Asp700I GAANNNNTTC 2 cut(s) 321, 2176
AspLEI GCGC 1 cut(s) 1529
AspS9I GGNCC 3 cut(s) 289, 1457, 2081
AsuC2I CCSGG 1 cut(s) 1551
AsuHPI GGTGA 8 cut(s) 106, 143, 170, 202, 1343, 1474, 1780, 1904
AvaI CYCGRG 2 cut(s) 215, 770
AvaII GGWCC 2 cut(s) 289, 1457
AxyI CCTNAGG 1 cut(s) 1467
BaeGI GKGCMC 1 cut(s) 1371
BalI TGGCCA 1 cut(s) 1655
BanII GRGCYC 1 cut(s) 114
BauI CACGAG 3 cut(s) 254, 588, 657
Bbv12I GWGCWC 4 cut(s) 114, 469, 898, 1371
BbvI GCAGC 3 cut(s) 160, 1817, 1990
BccI CCATC 8 cut(s) 395, 409, 703, 969, 1448, 1493, 1730, 1990
BciT130I CCWGG 5 cut(s) 435, 1193, 1890, 1963, 2031
BclI TGATCA 1 cut(s) 1858
BcnI CCSGG 1 cut(s) 1551
BcoDI GTCTC 6 cut(s) 654, 761, 871, 1070, 1215, 1917
BfaI CTAG 6 cut(s) 834, 942, 1542, 1695, 1797, 2150
BfmI CTRYAG 2 cut(s) 1258, 2004
BfuAI ACCTGC 2 cut(s) 1667, 1997
BglII AGATCT 2 cut(s) 529, 994
BisI GCNGC 3 cut(s) 149, 1806, 2004
BlsI GCNGC 3 cut(s) 150, 1807, 2005
Bme1390I CCNGG 6 cut(s) 435, 1193, 1551, 1890, 1963, 2031
Bme18I GGWCC 2 cut(s) 289, 1457
BmeRI GACNNNNNGTC 1 cut(s) 1455
BmeT110I CYCGRG 2 cut(s) 215, 770
BmgT120I GGNCC 3 cut(s) 289, 1457, 2081
BmiI GGNNCC 2 cut(s) 1459, 1473
BmrFI CCNGG 6 cut(s) 435, 1193, 1551, 1890, 1963, 2031
BmrI ACTGGG 2 cut(s) 608, 1998
BmsI GCATC 3 cut(s) 488, 1678, 2016
BmuI ACTGGG 2 cut(s) 608, 1998
BplI GAGNNNNNCTC 4 cut(s) 196, 228, 198, 230
BpmI CTGGAG 1 cut(s) 453
Bpu10I CCTNAGC 2 cut(s) 846, 1619
BpuEI CTTGAG 1 cut(s) 2217
BpuMI CCSGG 1 cut(s) 1551
Bsa29I ATCGAT 1 cut(s) 2056
BsaAI YACGTR 1 cut(s) 1064
BsaWI WCCGGW 2 cut(s) 1081, 1213
BsaXI ACNNNNNCTCC 4 cut(s) 330, 360, 555, 585
Bsc4I CCNNNNNNNGG 7 cut(s) 22, 150, 335, 1230, 1468, 1529, 1988
Bse118I RCCGGY 2 cut(s) 116, 788
Bse1I ACTGG 6 cut(s) 603, 1317, 1505, 1778, 1993, 2075
Bse21I CCTNAGG 1 cut(s) 1467
BseAI TCCGGA 1 cut(s) 1213
BseBI CCWGG 5 cut(s) 435, 1193, 1890, 1963, 2031
BseCI ATCGAT 1 cut(s) 2056
BseGI GGATG 4 cut(s) 880, 1485, 1982, 2055
BseLI CCNNNNNNNGG 7 cut(s) 22, 150, 335, 1230, 1468, 1529, 1988
BseMII CTCAG 4 cut(s) 860, 1112, 1362, 1633
BseNI ACTGG 6 cut(s) 603, 1317, 1505, 1778, 1993, 2075
BseRI GAGGAG 4 cut(s) 351, 579, 904, 1336
BseSI GKGCMC 1 cut(s) 1371
BseXI GCAGC 3 cut(s) 160, 1817, 1990
BseYI CCCAGC 1 cut(s) 1918
Bsh1236I CGCG 3 cut(s) 11, 53, 1527
Bsh1285I CGRYCG 1 cut(s) 155
BshFI GGCC 6 cut(s) 788, 851, 910, 1554, 1655, 2083
BshVI ATCGAT 1 cut(s) 2056
BsiEI CGRYCG 1 cut(s) 155
BsiHKAI GWGCWC 4 cut(s) 114, 469, 898, 1371
BsiHKCI CYCGRG 2 cut(s) 215, 770
BsiSI CCGG 5 cut(s) 117, 789, 1082, 1214, 1551
BslFI GGGAC 3 cut(s) 1406, 1443, 1546
BslI CCNNNNNNNGG 7 cut(s) 22, 150, 335, 1230, 1468, 1529, 1988
BsmAI GTCTC 6 cut(s) 654, 761, 871, 1070, 1215, 1917
BsmFI GGGAC 3 cut(s) 1406, 1443, 1546
BsmI GAATGC 2 cut(s) 1753, 2243
BsnI GGCC 6 cut(s) 788, 851, 910, 1554, 1655, 2083
BsoBI CYCGRG 2 cut(s) 215, 770
Bsp1286I GDGCHC 4 cut(s) 114, 469, 898, 1371
Bsp13I TCCGGA 1 cut(s) 1213
Bsp1407I TGTACA 1 cut(s) 1121
Bsp19I CCATGG 3 cut(s) 1224, 1416, 2084
Bsp68I TCGCGA 2 cut(s) 11, 53
BspACI CCGC 7 cut(s) 151, 251, 263, 1230, 1403, 1607, 1873
BspANI GGCC 6 cut(s) 788, 851, 910, 1554, 1655, 2083
BspCNI CTCAG 4 cut(s) 859, 1111, 1361, 1632
BspDI ATCGAT 1 cut(s) 2056
BspEI TCCGGA 1 cut(s) 1213
BspFNI CGCG 3 cut(s) 11, 53, 1527
BspLI GGNNCC 2 cut(s) 1459, 1473
BspMAI CTGCAG 1 cut(s) 2008
BspMI ACCTGC 2 cut(s) 1667, 1997
BspPI GGATC 4 cut(s) 242, 487, 686, 1973
BspQI GCTCTTC 1 cut(s) 312
BsrFI RCCGGY 2 cut(s) 116, 788
BsrGI TGTACA 1 cut(s) 1121
BsrI ACTGG 6 cut(s) 603, 1317, 1505, 1778, 1993, 2075
BssAI RCCGGY 2 cut(s) 116, 788
BssSI CACGAG 3 cut(s) 254, 588, 657
BssT1I CCWWGG 6 cut(s) 852, 1224, 1416, 1689, 1764, 2084
Bst2BI CACGAG 3 cut(s) 254, 588, 657
Bst2UI CCWGG 5 cut(s) 435, 1193, 1890, 1963, 2031
Bst4CI ACNGT 3 cut(s) 85, 124, 512
Bst6I CTCTTC 3 cut(s) 171, 312, 857
BstAPI GCANNNNNTGC 1 cut(s) 1170
BstAUI TGTACA 1 cut(s) 1121
BstBAI YACGTR 1 cut(s) 1064
BstDEI CTNAG 7 cut(s) 846, 1098, 1273, 1348, 1439, 1467, 1619
BstDSI CCRYGG 3 cut(s) 1224, 1416, 2084
BstF5I GGATG 4 cut(s) 880, 1485, 1982, 2055
BstFNI CGCG 3 cut(s) 11, 53, 1527
BstHHI GCGC 1 cut(s) 1529
BstMAI GTCTC 6 cut(s) 654, 761, 871, 1070, 1215, 1917
BstMCI CGRYCG 1 cut(s) 155
BstMWI GCNNNNNNNGC 5 cut(s) 59, 1170, 1375, 1802, 2155
BstNI CCWGG 5 cut(s) 435, 1193, 1890, 1963, 2031
BstNSI RCATGY 1 cut(s) 2162
BstSCI CCNGG 6 cut(s) 433, 1191, 1549, 1888, 1961, 2029
BstSFI CTRYAG 2 cut(s) 1258, 2004
BstSLI GKGCMC 1 cut(s) 1371
BstUI CGCG 3 cut(s) 11, 53, 1527
BstV1I GCAGC 3 cut(s) 160, 1817, 1990
BstX2I RGATCY 3 cut(s) 492, 529, 994
BstXI CCANNNNNNTGG 1 cut(s) 906
BstYI RGATCY 3 cut(s) 492, 529, 994
Bsu15I ATCGAT 1 cut(s) 2056
Bsu36I CCTNAGG 1 cut(s) 1467
BsuRI GGCC 6 cut(s) 788, 851, 910, 1554, 1655, 2083
BsuTUI ATCGAT 1 cut(s) 2056
BtgI CCRYGG 3 cut(s) 1224, 1416, 2084
BtsCI GGATG 4 cut(s) 880, 1485, 1982, 2055
BtsI GCAGTG 2 cut(s) 825, 1306
BtsIMutI CAGTG 5 cut(s) 825, 1306, 1310, 1785, 1986
BtuMI TCGCGA 2 cut(s) 11, 53
BveI ACCTGC 2 cut(s) 1667, 1997
CfoI GCGC 1 cut(s) 1529
Cfr10I RCCGGY 2 cut(s) 116, 788
Cfr13I GGNCC 3 cut(s) 289, 1457, 2081
ClaI ATCGAT 1 cut(s) 2056
CsiI ACCWGGT 1 cut(s) 433
Csp6I GTAC 3 cut(s) 1122, 1388, 2111
CviQI GTAC 3 cut(s) 1122, 1388, 2111
DdeI CTNAG 7 cut(s) 846, 1098, 1273, 1348, 1439, 1467, 1619
DraI TTTAAA 1 cut(s) 393
DriI GACNNNNNGTC 1 cut(s) 1455
EaeI YGGCCR 3 cut(s) 786, 1552, 1653
Eam1104I CTCTTC 3 cut(s) 171, 312, 857
Eam1105I GACNNNNNGTC 1 cut(s) 1455
EarI CTCTTC 3 cut(s) 171, 312, 857
EciI GGCGGA 1 cut(s) 1888
Ecl136II GAGCTC 1 cut(s) 112
Eco130I CCWWGG 6 cut(s) 852, 1224, 1416, 1689, 1764, 2084
Eco24I GRGCYC 1 cut(s) 114
Eco47I GGWCC 2 cut(s) 289, 1457
Eco53kI GAGCTC 1 cut(s) 112
Eco57I CTGAAG 1 cut(s) 1561
Eco81I CCTNAGG 1 cut(s) 1467
Eco88I CYCGRG 2 cut(s) 215, 770
EcoICRI GAGCTC 1 cut(s) 112
EcoRI GAATTC 1 cut(s) 446
EcoRII CCWGG 5 cut(s) 433, 1191, 1888, 1961, 2029
EcoT14I CCWWGG 6 cut(s) 852, 1224, 1416, 1689, 1764, 2084
EcoT22I ATGCAT 2 cut(s) 634, 2245
EcoT38I GRGCYC 1 cut(s) 114
ErhI CCWWGG 6 cut(s) 852, 1224, 1416, 1689, 1764, 2084
FaqI GGGAC 3 cut(s) 1406, 1443, 1546
FauI CCCGC 2 cut(s) 1223, 1600
FauNDI CATATG 2 cut(s) 1848, 1868
FbaI TGATCA 1 cut(s) 1858
FblI GTMKAC 1 cut(s) 1257
Fnu4HI GCNGC 3 cut(s) 149, 1806, 2004
FokI GGATG 4 cut(s) 867, 1472, 1969, 2062
FriOI GRGCYC 1 cut(s) 114
Fsp4HI GCNGC 3 cut(s) 149, 1806, 2004
FspBI CTAG 6 cut(s) 834, 942, 1542, 1695, 1797, 2150
GlaI GCGC 1 cut(s) 1528
GluI GCNGC 3 cut(s) 149, 1806, 2004
GsaI CCCAGC 1 cut(s) 1922
GsuI CTGGAG 1 cut(s) 453
HaeIII GGCC 6 cut(s) 788, 851, 910, 1554, 1655, 2083
HapII CCGG 5 cut(s) 117, 789, 1082, 1214, 1551
HhaI GCGC 1 cut(s) 1529
Hin6I GCGC 1 cut(s) 1527
HinP1I GCGC 1 cut(s) 1527
HincII GTYRAC 1 cut(s) 1761
HindII GTYRAC 1 cut(s) 1761
HpaII CCGG 5 cut(s) 117, 789, 1082, 1214, 1551
HphI GGTGA 8 cut(s) 106, 143, 170, 202, 1343, 1474, 1780, 1904
Hpy166II GTNNAC 5 cut(s) 1124, 1258, 1369, 1388, 1761
Hpy8I GTNNAC 5 cut(s) 1124, 1258, 1369, 1388, 1761
Hpy99I CGWCG 2 cut(s) 58, 248
HpyAV CCTTC 7 cut(s) 46, 78, 363, 797, 802, 1289, 2217
HpyCH4III ACNGT 3 cut(s) 85, 124, 512
HpyCH4IV ACGT 1 cut(s) 1063
HpyF10VI GCNNNNNNNGC 5 cut(s) 59, 1170, 1375, 1802, 2155
HpyF3I CTNAG 7 cut(s) 846, 1098, 1273, 1348, 1439, 1467, 1619
HpySE526I ACGT 1 cut(s) 1063
HspAI GCGC 1 cut(s) 1527
Kpn2I TCCGGA 1 cut(s) 1213
Ksp22I TGATCA 1 cut(s) 1858
LguI GCTCTTC 1 cut(s) 312
LmnI GCTCC 4 cut(s) 37, 472, 1471, 1853
Lsp1109I GCAGC 3 cut(s) 160, 1817, 1990
LweI GCATC 3 cut(s) 488, 1678, 2016
MabI ACCWGGT 1 cut(s) 433
MaeI CTAG 6 cut(s) 834, 942, 1542, 1695, 1797, 2150
MaeII ACGT 1 cut(s) 1063
MaeIII GTNAC 5 cut(s) 104, 131, 219, 1768, 1892
MboII GAAGA 8 cut(s) 158, 221, 289, 329, 424, 546, 874, 1567
MflI RGATCY 3 cut(s) 492, 529, 994
MhlI GDGCHC 4 cut(s) 114, 469, 898, 1371
MlsI TGGCCA 1 cut(s) 1655
MluCI AATT 7 cut(s) 176, 379, 388, 446, 748, 1041, 1704
MluNI TGGCCA 1 cut(s) 1655
MlyI GAGTC 1 cut(s) 227
MmeI TCCRAC 1 cut(s) 1797
Mox20I TGGCCA 1 cut(s) 1655
Mph1103I ATGCAT 2 cut(s) 634, 2245
MroI TCCGGA 1 cut(s) 1213
MroXI GAANNNNTTC 2 cut(s) 321, 2176
MscI TGGCCA 1 cut(s) 1655
MseI TTAA 2 cut(s) 392, 1700
MslI CAYNNNNRTG 2 cut(s) 258, 1181
Msp20I TGGCCA 1 cut(s) 1655
MspA1I CMGCKG 1 cut(s) 151
MspI CCGG 5 cut(s) 117, 789, 1082, 1214, 1551
MspR9I CCNGG 6 cut(s) 435, 1193, 1551, 1890, 1963, 2031
Mva1269I GAATGC 2 cut(s) 1753, 2243
MvaI CCWGG 5 cut(s) 435, 1193, 1890, 1963, 2031
MvnI CGCG 3 cut(s) 11, 53, 1527
MwoI GCNNNNNNNGC 5 cut(s) 59, 1170, 1375, 1802, 2155
NciI CCSGG 1 cut(s) 1551
NcoI CCATGG 3 cut(s) 1224, 1416, 2084
NdeI CATATG 2 cut(s) 1848, 1868
NlaIV GGNNCC 2 cut(s) 1459, 1473
NmeAIII GCCGAG 1 cut(s) 1979
NmuCI GTSAC 5 cut(s) 104, 131, 219, 1768, 1892
NruI TCGCGA 2 cut(s) 11, 53
NsiI ATGCAT 2 cut(s) 634, 2245
NspI RCATGY 1 cut(s) 2162
PaeR7I CTCGAG 1 cut(s) 215
PaqCI CACCTGC 2 cut(s) 1667, 1997
PciSI GCTCTTC 1 cut(s) 312
PcsI WCGNNNNNNNCGW 2 cut(s) 252, 586
PctI GAATGC 2 cut(s) 1753, 2243
PdmI GAANNNNTTC 2 cut(s) 321, 2176
PfeI GAWTC 9 cut(s) 161, 199, 209, 272, 646, 968, 1334, 1720, 2053
PflMI CCANNNNNTGG 1 cut(s) 1988
PkrI GCNGC 3 cut(s) 150, 1807, 2005
PleI GAGTC 1 cut(s) 226
PpsI GAGTC 1 cut(s) 226
Ppu21I YACGTR 1 cut(s) 1064
Psp124BI GAGCTC 1 cut(s) 114
Psp6I CCWGG 5 cut(s) 433, 1191, 1888, 1961, 2029
PspFI CCCAGC 1 cut(s) 1918
PspGI CCWGG 5 cut(s) 433, 1191, 1888, 1961, 2029
PspN4I GGNNCC 2 cut(s) 1459, 1473
PspPI GGNCC 3 cut(s) 289, 1457, 2081
PstI CTGCAG 1 cut(s) 2008
PsuI RGATCY 3 cut(s) 492, 529, 994
RruI TCGCGA 2 cut(s) 11, 53
RsaI GTAC 3 cut(s) 1123, 1389, 2112
RsaNI GTAC 3 cut(s) 1122, 1388, 2111
RseI CAYNNNNRTG 2 cut(s) 258, 1181
SacI GAGCTC 1 cut(s) 114
SapI GCTCTTC 1 cut(s) 312
SaqAI TTAA 2 cut(s) 392, 1700
SatI GCNGC 3 cut(s) 149, 1806, 2004
Sau96I GGNCC 3 cut(s) 289, 1457, 2081
SchI GAGTC 1 cut(s) 227
ScrFI CCNGG 6 cut(s) 435, 1193, 1551, 1890, 1963, 2031
SduI GDGCHC 4 cut(s) 114, 469, 898, 1371
SexAI ACCWGGT 1 cut(s) 433
SfaNI GCATC 3 cut(s) 488, 1678, 2016
SfcI CTRYAG 2 cut(s) 1258, 2004
Sfr274I CTCGAG 1 cut(s) 215
SinI GGWCC 2 cut(s) 289, 1457
SlaI CTCGAG 1 cut(s) 215
SmiI ATTTAAAT 1 cut(s) 393
SmiMI CAYNNNNRTG 2 cut(s) 258, 1181
SmlI CTYRAG 2 cut(s) 215, 2232
SmoI CTYRAG 2 cut(s) 215, 2232
Sse9I AATT 7 cut(s) 176, 379, 388, 446, 748, 1041, 1704
SsiI CCGC 7 cut(s) 151, 251, 263, 1230, 1403, 1607, 1873
SspI AATATT 1 cut(s) 925
SspMI CTAG 6 cut(s) 834, 942, 1542, 1695, 1797, 2150
SstI GAGCTC 1 cut(s) 114
StyD4I CCNGG 6 cut(s) 433, 1191, 1549, 1888, 1961, 2029
StyI CCWWGG 6 cut(s) 852, 1224, 1416, 1689, 1764, 2084
SwaI ATTTAAAT 1 cut(s) 393
TaaI ACNGT 3 cut(s) 85, 124, 512
TaiI ACGT 1 cut(s) 1066
TaqI TCGA 6 cut(s) 139, 216, 275, 801, 1496, 2056
TasI AATT 7 cut(s) 176, 379, 388, 446, 748, 1041, 1704
TatI WGTACW 1 cut(s) 1121
TfiI GAWTC 9 cut(s) 161, 199, 209, 272, 646, 968, 1334, 1720, 2053
Tru1I TTAA 2 cut(s) 392, 1700
Tru9I TTAA 2 cut(s) 392, 1700
TscAI CASTG 5 cut(s) 825, 1306, 1317, 1785, 1993
TseFI GTSAC 5 cut(s) 104, 131, 219, 1768, 1892
TseI GCWGC 3 cut(s) 148, 1805, 2003
Tsp45I GTSAC 5 cut(s) 104, 131, 219, 1768, 1892
TspGWI ACGGA 1 cut(s) 1839
TspRI CASTG 5 cut(s) 825, 1306, 1317, 1785, 1993
Van91I CCANNNNNTGG 1 cut(s) 1988
VneI GTGCAC 1 cut(s) 1367
VpaK11BI GGWCC 2 cut(s) 289, 1457
XapI RAATTY 2 cut(s) 446, 1041
XceI RCATGY 1 cut(s) 2162
XcmI CCANNNNNNNNNTGG 1 cut(s) 2135
XhoI CTCGAG 1 cut(s) 215
XmiI GTMKAC 1 cut(s) 1257
XmnI GAANNNNTTC 2 cut(s) 321, 2176
XspI CTAG 6 cut(s) 834, 942, 1542, 1695, 1797, 2150
Zsp2I ATGCAT 2 cut(s) 634, 2245
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.