Rw5G004380

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
4569232 .. 4572922
3691 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G004380.1

Sequence Viewer

Length: 2361 bp
ATGGGCTTCTTCAGTCCTAACAATTCTGATAATCAGTATGTGGGGTTATGGCACAAAAATATATTTCCCCGTAAAGTTGTATGGGTGGCCAACAGAGGAACGCCTCTTGCAGGTGCAGACATCTCTGCTAGTTTCAGAATTAGCAGCAATGGGAATCTGGAGCTTATAAATGGGAGACAGTGTCGAGTCTTGTCAATCAATACTTCTGTGTCATCCAATGGTTCAGCTGCAGTTCTTCTAGACAATGGAAATTTTGTTGTCAAAGATGATAATGGAGCTGAGTTATGGGGGAGTTTTGATTTTCGTACTGACACAATCCTACCAAGTATGGCGCTACTCTTTGATAGTAAGTCTGGAAAAAGCAATTTATTGAGTGCCTGGAAAAGTTATAACGATCCATCAGCTGGGATATACTCGGTTGGACTGTCAGCACAGACGCCATCACAGGTGTTCATTTGGATCAATGGATCAACTCCCCACTGGAGAAGTGGGCCATGGGATAAATCAAAGTTCATTGGTGTACCAGAAATGAATGCTCAATATCTAAGTGGGTTCACTTTAGATAATAGTGCTCAACATATCACATATAGTAGTTACAACATTTCCGCATATGTAGAAATCTCTTCACAAGGTTCAATAAAGCTTATGTCCTCGCAAGATGGAAAGAGCTGGAATCTTACCTTGGAGGTACCAAAGAATCCATGTGACATGTATGGAGCATGTGGACCTTTTGGGGTTTGCAAAGCTTCTGAATCTCAAATCTGCGAGTGTTTGAAAGGGTTTGTACCGAAGTCAGACAAGGATTGGAGCAACGGAAACTGGAGAGGAGGGTGTGTGAGGAAAACCAAATTATTTTGTGGGAGATACGCTGATAAGTCAGTCTCATCAAGTGGAAAAGAAAATGATAATGATGGGTTTTGGAAGATGGTAAGGTTAAAAGTACCAGATTTTCATGAGTATATTACTTCCTTCGATGCTCCAGACACATCCGAAGACTGCAAGAAACTGTGCCTACATAATTGTTCTTGCCAGGCTTATGCATTTGTTAGTAGTGTAGGGTGTTTGATCTGGTCTACAGATCTTATTGATATACAGGAGTTTTCCTCCGGCGGAGCGGATCTTTTTATCCGCCTAGCACATGTAGAACTAGTTGCAGGGAAGCCAATAAACTTAATTGTCAGCCTCACAGCTTTCTGTTTTATCAGTATGCTGGGTGCCATAGTGTTTGGTTTGCACAGGTCGCAAGCTAACCAAAAGGAAACAGGAAACGAAAAAGTAAAAACTCAATGTTTTGGACCGAACAACACGATTCAAATTTCAAGAAACACTGTCCGAGAGTATTTAGGAAAATATGATCCATCAGAGTTTGTGATCTATGATTTTGACAGCATATTAATTGCCACAAACAATTTTAGCCTCACAAATAAACTAGGCCAAGGAGGCTTTGGTCCAGTATATAGGGGAAAGCTACAAGAAGGGAAGGAGATAGCAGTGAAAAGACTATGCAGTAGCTCAGGCCAAGGATTAGAAGAGTTCAAAAATGAGGTGTTGTTGATCTCCAATCTCCAGCATAAAAATCTTGTTAGAATTATGGGATGCTGCATTAAACAGGATGAGAAGTTACTCATTTATGAGTTCATGCCAAACAGAAGCTTGGATACTTTTCTATTTGATCCCATGAGAAGAGCAGTGCTTGATTGGGCAACACGCTTTAATATTATTCAGGGTGTTGCTAGAGGCCTTCTTTATCTCCATCATGATTCCTGTTTGAAGATAATACACAGAGATCTTAAAGTCAGCAACATTCTCTTGGATGAGAAAATGAACGCCAAAATTTCAGATTTTGGATTGGCACGCATAGTTGAAGGAGCAGAAAATCTAGAAAAGACTCAGAAGGTTGTGGGAACGCGTGGCTATATGTCTCCGGAGTATGCCATGGGTGGAATATTTTCTGAAAAATCTGATGTGTATAGCTTCGGGGTCTTGGTATTAGAGGTTATTAGCAGCAAGAAGAATACCAACTTCTGTATCCATGACCAACAGCTAGGCTTTCTACCCTATGCATGGAACTTGTGGAATGAAGGCAGGGGATTGGAGTTGGCAGATGAAGTGTTGGATGATTCATATTCCTCATCTGAAGTAATGAGATGCCTTCATATTGGGCTTCTTTGTGTACAGGACAATGCAGCGGATAGACCAACTATGCCTAATGTCGTTTTCATGCTTAATAGTGAGACAGCTTGTCCACAGCCTAAGCAGCCTATATTCATTCTCCAAACCTCACTCTCTCGACCTCAACCACAGTTTGTGAATACTTGTTCCGCAAATGAAGCCACCATGACAGATATTGAAGGACGATAG

Protein Analysis

786

Amino Acids

87.28

Weight (kDa)

6.39

Isoelectric Point (pI)

37.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 26 - 128 8.3e-25 D-mannose binding lectin
S_locus_glycop PF00954 161 - 265 1.9e-29 S-locus glycoprotein domain
PAN_2 PF08276 301 - 364 3.4e-16 PAN-like domain
Pkinase PF00069 472 - 671 1.8e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 473 - 673 2.1e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 167, 390
AarI CACCTGC 1 cut(s) 101
Acc36I ACCTGC 1 cut(s) 101
Acc65I GGTACC 1 cut(s) 688
AccB1I GGYRCC 2 cut(s) 688, 1214
AccB7I CCANNNNNTGG 1 cut(s) 404
AccBSI CCGCTC 1 cut(s) 1115
AccI GTMKAC 1 cut(s) 1073
AccII CGCG 1 cut(s) 1909
AccIII TCCGGA 1 cut(s) 1924
AciI CCGC 6 cut(s) 606, 1110, 1115, 1129, 2189, 2322
AclWI GGATC 6 cut(s) 389, 467, 475, 1125, 1349, 1667
AcoI YGGCCR 1 cut(s) 87
AcsI RAATTY 3 cut(s) 250, 1314, 1833
AcuI CTGAAG 1 cut(s) 2157
AcyI GRCGYC 1 cut(s) 437
AfaI GTAC 6 cut(s) 307, 522, 690, 786, 942, 2175
AfiI CCNNNNNNNGG 3 cut(s) 110, 404, 2064
AflIII ACRYGT 3 cut(s) 708, 1138, 1907
AgsI TTSAA 8 cut(s) 636, 775, 1313, 1320, 1537, 1771, 1865, 2351
AhdI GACNNNNNGTC 1 cut(s) 2241
AhlI ACTAGT 1 cut(s) 1147
AjnI CCWGG 2 cut(s) 377, 1029
AjuI GAANNNNNNNTTGG 2 cut(s) 665, 697
Alw21I GWGCWC 1 cut(s) 574
Alw26I GTCTC 4 cut(s) 169, 886, 1926, 2228
AlwI GGATC 6 cut(s) 389, 467, 475, 1125, 1349, 1667
Aor13HI TCCGGA 1 cut(s) 1924
AoxI GGCC 5 cut(s) 87, 491, 1432, 1516, 1738
ApeKI GCWGC 6 cut(s) 144, 227, 1599, 2004, 2186, 2257
ApoI RAATTY 3 cut(s) 250, 1314, 1833
AseI ATTAAT 1 cut(s) 1394
Asp700I GAANNNNTTC 1 cut(s) 1948
Asp718I GGTACC 1 cut(s) 688
AspLEI GCGC 1 cut(s) 334
AspS9I GGNCC 4 cut(s) 491, 725, 1295, 1448
AvaII GGWCC 3 cut(s) 725, 1295, 1448
BaeI ACNNNNGTAYC 2 cut(s) 2011, 2044
BalI TGGCCA 1 cut(s) 89
BanI GGYRCC 2 cut(s) 688, 1214
BarI GAAGNNNNNNTAC 2 cut(s) 1642, 1674
BbsI GAAGAC 1 cut(s) 999
Bbv12I GWGCWC 1 cut(s) 574
BbvI GCAGC 6 cut(s) 156, 214, 1586, 2016, 2198, 2269
BccI CCATC 7 cut(s) 406, 448, 653, 905, 919, 1366, 1761
BciT130I CCWGG 2 cut(s) 379, 1031
BciVI GTATCC 2 cut(s) 1651, 2039
BcoDI GTCTC 4 cut(s) 169, 886, 1926, 2228
BcuI ACTAGT 1 cut(s) 1147
BfaI CTAG 8 cut(s) 129, 239, 1133, 1148, 1430, 1734, 1880, 2045
BfmI CTRYAG 2 cut(s) 228, 1074
BfoI RGCGCY 1 cut(s) 335
BfuAI ACCTGC 1 cut(s) 101
BfuI GTATCC 2 cut(s) 1651, 2039
BglI GCCNNNNNGGC 1 cut(s) 1440
BglII AGATCT 2 cut(s) 1078, 1786
BisI GCNGC 6 cut(s) 145, 228, 1600, 2005, 2187, 2258
BlsI GCNGC 6 cut(s) 146, 229, 1601, 2006, 2188, 2259
Bme1390I CCNGG 2 cut(s) 379, 1031
Bme18I GGWCC 3 cut(s) 725, 1295, 1448
BmeRI GACNNNNNGTC 1 cut(s) 2241
BmgT120I GGNCC 4 cut(s) 491, 725, 1295, 1448
BmiI GGNNCC 2 cut(s) 690, 1216
BmrFI CCNGG 2 cut(s) 379, 1031
BmsI GCATC 3 cut(s) 964, 1586, 2138
BpiI GAAGAC 1 cut(s) 999
BplI GAGNNNNNCTC 2 cut(s) 1088, 1120
BpmI CTGGAG 5 cut(s) 179, 502, 841, 963, 1550
Bpu10I CCTNAGC 2 cut(s) 1513, 2253
BsaHI GRCGYC 1 cut(s) 437
BsaJI CCNNGG 5 cut(s) 494, 681, 1435, 1519, 1935
BsaWI WCCGGW 1 cut(s) 1924
BsaXI ACNNNNNCTCC 4 cut(s) 166, 196, 819, 849
Bsc4I CCNNNNNNNGG 3 cut(s) 110, 404, 2064
Bse1I ACTGG 3 cut(s) 485, 824, 1451
Bse3DI GCAATG 1 cut(s) 154
BseAI TCCGGA 1 cut(s) 1924
BseBI CCWGG 2 cut(s) 379, 1031
BseDI CCNNGG 5 cut(s) 494, 681, 1435, 1519, 1935
BseGI GGATG 6 cut(s) 212, 986, 1601, 1618, 1819, 2122
BseLI CCNNNNNNNGG 3 cut(s) 110, 404, 2064
BseMI GCAATG 1 cut(s) 154
BseMII CTCAG 3 cut(s) 270, 1527, 1904
BseNI ACTGG 3 cut(s) 485, 824, 1451
BseRI GAGGAG 1 cut(s) 840
BseXI GCAGC 6 cut(s) 156, 214, 1586, 2016, 2198, 2269
BseYI CCCAGC 2 cut(s) 404, 1210
BsgI GTGCAG 1 cut(s) 135
Bsh1236I CGCG 1 cut(s) 1909
BshFI GGCC 5 cut(s) 89, 493, 1434, 1518, 1740
BshNI GGYRCC 2 cut(s) 688, 1214
BsiHKAI GWGCWC 1 cut(s) 574
BsiSI CCGG 2 cut(s) 1107, 1925
BslI CCNNNNNNNGG 3 cut(s) 110, 404, 2064
BsmAI GTCTC 4 cut(s) 169, 886, 1926, 2228
BsmI GAATGC 1 cut(s) 538
BsnI GGCC 5 cut(s) 89, 493, 1434, 1518, 1740
Bsp1286I GDGCHC 1 cut(s) 574
Bsp13I TCCGGA 1 cut(s) 1924
Bsp1407I TGTACA 1 cut(s) 2173
Bsp19I CCATGG 2 cut(s) 494, 1935
BspACI CCGC 6 cut(s) 606, 1110, 1115, 1129, 2189, 2322
BspANI GGCC 5 cut(s) 89, 493, 1434, 1518, 1740
BspCNI CTCAG 3 cut(s) 271, 1526, 1903
BspEI TCCGGA 1 cut(s) 1924
BspFNI CGCG 1 cut(s) 1909
BspHI TCATGA 2 cut(s) 952, 1756
BspLI GGNNCC 2 cut(s) 690, 1216
BspMAI CTGCAG 1 cut(s) 232
BspMI ACCTGC 1 cut(s) 101
BspPI GGATC 6 cut(s) 389, 467, 475, 1125, 1349, 1667
BspQI GCTCTTC 1 cut(s) 1678
BspT107I GGYRCC 2 cut(s) 688, 1214
BsrBI CCGCTC 1 cut(s) 1115
BsrDI GCAATG 1 cut(s) 154
BsrGI TGTACA 1 cut(s) 2173
BsrI ACTGG 3 cut(s) 485, 824, 1451
BssECI CCNNGG 5 cut(s) 494, 681, 1435, 1519, 1935
BssNI GRCGYC 1 cut(s) 437
BssT1I CCWWGG 5 cut(s) 494, 681, 1435, 1519, 1935
Bst2UI CCWGG 2 cut(s) 379, 1031
Bst4CI ACNGT 5 cut(s) 180, 426, 1008, 1330, 2304
Bst6I CTCTTC 3 cut(s) 628, 1524, 1678
BstACI GRCGYC 1 cut(s) 437
BstAUI TGTACA 1 cut(s) 2173
BstC8I GCNNGC 2 cut(s) 1245, 1855
BstDEI CTNAG 5 cut(s) 279, 545, 1513, 1890, 2253
BstDSI CCRYGG 2 cut(s) 494, 1935
BstENI CCTNNNNNAGG 1 cut(s) 108
BstF5I GGATG 6 cut(s) 212, 986, 1601, 1618, 1819, 2122
BstFNI CGCG 1 cut(s) 1909
BstH2I RGCGCY 1 cut(s) 335
BstHHI GCGC 1 cut(s) 334
BstMAI GTCTC 4 cut(s) 169, 886, 1926, 2228
BstMWI GCNNNNNNNGC 4 cut(s) 1240, 1440, 2257, 2330
BstNI CCWGG 2 cut(s) 379, 1031
BstNSI RCATGY 3 cut(s) 712, 723, 1142
BstSCI CCNGG 2 cut(s) 377, 1029
BstSFI CTRYAG 2 cut(s) 228, 1074
BstUI CGCG 1 cut(s) 1909
BstV1I GCAGC 6 cut(s) 156, 214, 1586, 2016, 2198, 2269
BstV2I GAAGAC 1 cut(s) 999
BstX2I RGATCY 3 cut(s) 1078, 1117, 1786
BstYI RGATCY 3 cut(s) 1078, 1117, 1786
BsuI GTATCC 2 cut(s) 1651, 2039
BsuRI GGCC 5 cut(s) 89, 493, 1434, 1518, 1740
BtgI CCRYGG 2 cut(s) 494, 1935
BtsCI GGATG 6 cut(s) 212, 986, 1601, 1618, 1819, 2122
BtsI GCAGTG 2 cut(s) 1497, 1695
BtsIMutI CAGTG 5 cut(s) 185, 478, 1326, 1497, 1695
BveI ACCTGC 1 cut(s) 101
Cac8I GCNNGC 2 cut(s) 1245, 1855
CciI TCATGA 2 cut(s) 952, 1756
CfoI GCGC 1 cut(s) 334
Cfr13I GGNCC 4 cut(s) 491, 725, 1295, 1448
CseI GACGC 1 cut(s) 445
Csp6I GTAC 6 cut(s) 306, 521, 689, 785, 941, 2174
CviQI GTAC 6 cut(s) 306, 521, 689, 785, 941, 2174
DdeI CTNAG 5 cut(s) 279, 545, 1513, 1890, 2253
DriI GACNNNNNGTC 1 cut(s) 2241
EaeI YGGCCR 1 cut(s) 87
Eam1104I CTCTTC 3 cut(s) 628, 1524, 1678
Eam1105I GACNNNNNGTC 1 cut(s) 2241
EarI CTCTTC 3 cut(s) 628, 1524, 1678
EciI GGCGGA 2 cut(s) 1118, 1125
Eco130I CCWWGG 5 cut(s) 494, 681, 1435, 1519, 1935
Eco147I AGGCCT 1 cut(s) 1740
Eco47I GGWCC 3 cut(s) 725, 1295, 1448
Eco57I CTGAAG 1 cut(s) 2157
EcoNI CCTNNNNNAGG 1 cut(s) 108
EcoRII CCWGG 2 cut(s) 377, 1029
EcoT14I CCWWGG 5 cut(s) 494, 681, 1435, 1519, 1935
EcoT22I ATGCAT 2 cut(s) 1042, 2065
ErhI CCWWGG 5 cut(s) 494, 681, 1435, 1519, 1935
FauNDI CATATG 1 cut(s) 610
FblI GTMKAC 1 cut(s) 1073
Fnu4HI GCNGC 6 cut(s) 145, 228, 1600, 2005, 2187, 2258
FokI GGATG 6 cut(s) 199, 973, 1608, 1625, 1826, 2129
Fsp4HI GCNGC 6 cut(s) 145, 228, 1600, 2005, 2187, 2258
FspBI CTAG 8 cut(s) 129, 239, 1133, 1148, 1430, 1734, 1880, 2045
GlaI GCGC 1 cut(s) 333
GluI GCNGC 6 cut(s) 145, 228, 1600, 2005, 2187, 2258
GsaI CCCAGC 2 cut(s) 408, 1214
GsuI CTGGAG 5 cut(s) 179, 502, 841, 963, 1550
HaeII RGCGCY 1 cut(s) 335
HaeIII GGCC 5 cut(s) 89, 493, 1434, 1518, 1740
HapII CCGG 2 cut(s) 1107, 1925
HgaI GACGC 1 cut(s) 445
HhaI GCGC 1 cut(s) 334
Hin1I GRCGYC 1 cut(s) 437
Hin6I GCGC 1 cut(s) 332
HinP1I GCGC 1 cut(s) 332
HindIII AAGCTT 3 cut(s) 641, 744, 1651
HinfI GANTC 9 cut(s) 154, 186, 673, 697, 752, 1309, 1760, 1888, 2120
HpaII CCGG 2 cut(s) 1107, 1925
Hpy166II GTNNAC 6 cut(s) 521, 555, 725, 1074, 2174, 2246
Hpy8I GTNNAC 6 cut(s) 521, 555, 725, 1074, 2174, 2246
HpyAV CCTTC 9 cut(s) 979, 1469, 1474, 1751, 1859, 1888, 2075, 2162, 2345
HpyCH4III ACNGT 5 cut(s) 180, 426, 1008, 1330, 2304
HpyF10VI GCNNNNNNNGC 4 cut(s) 1240, 1440, 2257, 2330
HpyF3I CTNAG 5 cut(s) 279, 545, 1513, 1890, 2253
Hsp92I GRCGYC 1 cut(s) 437
HspAI GCGC 1 cut(s) 332
Kpn2I TCCGGA 1 cut(s) 1924
KpnI GGTACC 1 cut(s) 692
LguI GCTCTTC 1 cut(s) 1678
LmnI GCTCC 7 cut(s) 160, 275, 716, 807, 982, 1112, 1868
Lsp1109I GCAGC 6 cut(s) 156, 214, 1586, 2016, 2198, 2269
LweI GCATC 3 cut(s) 964, 1586, 2138
MaeI CTAG 8 cut(s) 129, 239, 1133, 1148, 1430, 1734, 1880, 2045
MaeIII GTNAC 3 cut(s) 593, 704, 1620
MbiI CCGCTC 1 cut(s) 1115
MboII GAAGA 8 cut(s) 227, 615, 934, 1004, 1541, 1695, 1783, 2023
MflI RGATCY 3 cut(s) 1078, 1117, 1786
MhlI GDGCHC 1 cut(s) 574
MlsI TGGCCA 1 cut(s) 89
MluI ACGCGT 1 cut(s) 1907
MluNI TGGCCA 1 cut(s) 89
MlyI GAGTC 2 cut(s) 195, 1882
MmeI TCCRAC 2 cut(s) 400, 2094
Mox20I TGGCCA 1 cut(s) 89
Mph1103I ATGCAT 2 cut(s) 1042, 2065
MroI TCCGGA 1 cut(s) 1924
MroXI GAANNNNTTC 1 cut(s) 1948
MscI TGGCCA 1 cut(s) 89
MseI TTAA 7 cut(s) 935, 1172, 1394, 1605, 1713, 1791, 2226
Msp20I TGGCCA 1 cut(s) 89
MspA1I CMGCKG 3 cut(s) 227, 404, 2189
MspI CCGG 2 cut(s) 1107, 1925
MspR9I CCNGG 2 cut(s) 379, 1031
Mva1269I GAATGC 1 cut(s) 538
MvaI CCWGG 2 cut(s) 379, 1031
MvnI CGCG 1 cut(s) 1909
MwoI GCNNNNNNNGC 4 cut(s) 1240, 1440, 2257, 2330
NcoI CCATGG 2 cut(s) 494, 1935
NdeI CATATG 1 cut(s) 610
NlaIV GGNNCC 2 cut(s) 690, 1216
NmuCI GTSAC 1 cut(s) 704
NsiI ATGCAT 2 cut(s) 1042, 2065
NspI RCATGY 3 cut(s) 712, 723, 1142
PagI TCATGA 2 cut(s) 952, 1756
PaqCI CACCTGC 1 cut(s) 101
PceI AGGCCT 1 cut(s) 1740
PciI ACATGT 2 cut(s) 708, 1138
PciSI GCTCTTC 1 cut(s) 1678
PctI GAATGC 1 cut(s) 538
PdmI GAANNNNTTC 1 cut(s) 1948
PfeI GAWTC 7 cut(s) 154, 673, 697, 752, 1309, 1760, 2120
PflFI GACNNNGTC 1 cut(s) 180
PflMI CCANNNNNTGG 1 cut(s) 404
PkrI GCNGC 6 cut(s) 146, 229, 1601, 2006, 2188, 2259
PleI GAGTC 2 cut(s) 194, 1882
PpsI GAGTC 2 cut(s) 194, 1882
PscI ACATGT 2 cut(s) 708, 1138
PshBI ATTAAT 1 cut(s) 1394
PsiI TTATAA 2 cut(s) 167, 390
Psp6I CCWGG 2 cut(s) 377, 1029
PspFI CCCAGC 2 cut(s) 404, 1210
PspGI CCWGG 2 cut(s) 377, 1029
PspN4I GGNNCC 2 cut(s) 690, 1216
PspPI GGNCC 4 cut(s) 491, 725, 1295, 1448
PstI CTGCAG 1 cut(s) 232
PsuI RGATCY 3 cut(s) 1078, 1117, 1786
PsyI GACNNNGTC 1 cut(s) 180
PvuII CAGCTG 2 cut(s) 227, 404
RsaI GTAC 6 cut(s) 307, 522, 690, 786, 942, 2175
RsaNI GTAC 6 cut(s) 306, 521, 689, 785, 941, 2174
SapI GCTCTTC 1 cut(s) 1678
SaqAI TTAA 7 cut(s) 935, 1172, 1394, 1605, 1713, 1791, 2226
SatI GCNGC 6 cut(s) 145, 228, 1600, 2005, 2187, 2258
Sau96I GGNCC 4 cut(s) 491, 725, 1295, 1448
SchI GAGTC 2 cut(s) 195, 1882
ScrFI CCNGG 2 cut(s) 379, 1031
SduI GDGCHC 1 cut(s) 574
SfaNI GCATC 3 cut(s) 964, 1586, 2138
SfcI CTRYAG 2 cut(s) 228, 1074
SinI GGWCC 3 cut(s) 725, 1295, 1448
SpeI ACTAGT 1 cut(s) 1147
SseBI AGGCCT 1 cut(s) 1740
SsiI CCGC 6 cut(s) 606, 1110, 1115, 1129, 2189, 2322
SspI AATATT 2 cut(s) 1717, 1947
SspMI CTAG 8 cut(s) 129, 239, 1133, 1148, 1430, 1734, 1880, 2045
StuI AGGCCT 1 cut(s) 1740
StyD4I CCNGG 2 cut(s) 377, 1029
StyI CCWWGG 5 cut(s) 494, 681, 1435, 1519, 1935
TaaI ACNGT 5 cut(s) 180, 426, 1008, 1330, 2304
TaqI TCGA 3 cut(s) 184, 972, 2290
TaqII GACCGA 1 cut(s) 1312
TatI WGTACW 1 cut(s) 2173
TfiI GAWTC 7 cut(s) 154, 673, 697, 752, 1309, 1760, 2120
Tru1I TTAA 7 cut(s) 935, 1172, 1394, 1605, 1713, 1791, 2226
Tru9I TTAA 7 cut(s) 935, 1172, 1394, 1605, 1713, 1791, 2226
TscAI CASTG 5 cut(s) 185, 485, 1333, 1497, 1695
TseFI GTSAC 1 cut(s) 704
TseI GCWGC 6 cut(s) 144, 227, 1599, 2004, 2186, 2257
Tsp45I GTSAC 1 cut(s) 704
TspGWI ACGGA 1 cut(s) 828
TspRI CASTG 5 cut(s) 185, 485, 1333, 1497, 1695
Tth111I GACNNNGTC 1 cut(s) 180
Van91I CCANNNNNTGG 1 cut(s) 404
VpaK11BI GGWCC 3 cut(s) 725, 1295, 1448
VspI ATTAAT 1 cut(s) 1394
XagI CCTNNNNNAGG 1 cut(s) 108
XapI RAATTY 3 cut(s) 250, 1314, 1833
XbaI TCTAGA 2 cut(s) 238, 1879
XceI RCATGY 3 cut(s) 712, 723, 1142
XcmI CCANNNNNNNNNTGG 2 cut(s) 485, 1442
XmiI GTMKAC 1 cut(s) 1073
XmnI GAANNNNTTC 1 cut(s) 1948
XspI CTAG 8 cut(s) 129, 239, 1133, 1148, 1430, 1734, 1880, 2045
Zsp2I ATGCAT 2 cut(s) 1042, 2065
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.