RchiOBHm_Chr4g0394151

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000033
Physical Location & Seq
Reverse (-)
9787909 .. 9791528
3620 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ36667

Sequence Viewer

Length: 2505 bp
ATGCAACTGGGTAGTGTTACTTTGTTTTTCTTATTCATCTTCAGTTTGCTTGTGTCACTGTATGGCGCTGAAGTATATACCATAACTCCTTCACACCCATTATCCGAAGGAGAAACTCTAGTCTCTCCTGGTCTAATATTTGAATTGGGCTTCTTCAGTCCTAATAGTTCTGCCAATAAGTATATTGGCTTGTGGCACAAAAGTATATATCCCCGTAAATATGTATGGGTGGCAAACAGAGATAATCCTCTTGCAGCTACAGACACCTTGGCTAGTTTGAGAATTGGCAGCAGCGGGAGTCTGGAGCTCGTAGATGGGAAACAGATTTCTGTCTGGTCGGCAAATATATCTAGTTGTTCATCTGCAGTTCTCTTAGATAATGGAAACTTCGTTGCCAAAGGTGTTATGGGAGCTGATTTGTGGGAGAGTTTTCATAATCCTAGTGACTCAATACTGCCAAGCATGTTGGTGGGATATGATAGAGGTTCTGGAAAACAAAATTTCTTGAGATCTTGGAAAAGTGAAAATGATCCATCACCGGGGATATTCTGGGGGGGATTGTCAGCAGAGTTGCCAGCACAAGCGATCATTTGGATTAATGGATCTACTCCCCACTGGAGAAGTGGGCCATGGGATAAATCAAAGTTTATTGGTGCACCTTCAATGGAATCTCAGTATGTAAATCCATGGACTCTTGTTGGTAATGTGACACAGGGAGCAAGGTATGTATCTTATAGTTTTGATCAAATTCCTGGTGACAAATATCTTGCATATGACGCCATATCTTCTGAAGGTGTAGCGAGCCTTTTTTATTCAGTAGGTGGCAAGAACTGGTCTCTTAACTGGAAGTCATGGAATAACCCATGTGACAACTATGGCGCCTGTGGACCTTTTGGGGTTTGCAAATCTTCTAAATCTCCAATCTGCAAGTGTTTGAAAGGCTTTATACCCAAGTCATATGAGGAATGGAGAAAAGGAAACTGGACCGGAGGATGTGTGAGACGAACAAATTTGTCTTGTGAGACGCACATAAATGAATCAGTCTCATCAAAAGGAAAAGATGGGTTTTTGAAGTTAGAAAGAATGAAAGTACCCGATTTTCATGAATATCTGGGTTCTTTGGCTCTAGAAAAGTCCGAGGACTGCAAGATACAGTGCCTGAGTAATTGTTCTTGCCTGGCTTATGCCCATGTTGATACCATAGGGTGTTTGGTGTGGTCCAAAGACCTTATTGATATGCAACAGTCTCCATCTTTTGAAGAAGATCTTTATGTCCGCCTACCACACTCAGAACTAGTTGAAGGAAAGCCGATAAACTTAATTGCCAGCCTTACAACAATTGGATTTATGAGTATCTTAGTTGCCATAGTCTTCAGTTTGCACAGGTGGAATGCCAACCAAAAGCGCCATGTCGAATTAACAGCACGGCGCTTGGAATCAACTAGTATGATTAAGATTCATAGAGATAGTATTCGAGGATATATAGGAAAGCATGATCCCTCGGAGCTAAAGATATACGATTTTGATAGCATACTAATCGCCACAAACAGCTTCAGCATTACTAACAAACTCGGTCAAGGAGGCTTTGGCGCAGTTTATAAGGGGATGTTACCAGAAGGGAAGGAAATAGCAGTAAAAAGACTATCTAGTAGCTCAGGGCAAGGTGTCGAAGAGTTCAAGAATGAGATGCTGTTGATCTCCAATCTTCAACACAAAAACCTTGTTAGGATGATGGGTTGCTGTGTTAAAGAGGATGAGAAGTTACTAATTTACGAGTTTATGCCCAACAAAAGCCTGGATACTTTTCTATTGGATCTGACGAAGAGAGTAGTGCTTGATTGGGCTACACGCTTTAATATTATTCAGGGTGTTGCTAGAGGGCTTCTTTATCTCCATCATGATTCCTATGTGAAGGTGATACATAGAGATTTAAAAGTCAGTAACATTCTCTTGGATGAGAAAATGAATCCAAAAATCTCAGATTTTGGATTGGCACGCATAGTTGAAGAAACACAGAGTATAGAAAATACTCAGAAGGTTGTTGGAACACGTGGCTATATGTCTCCAGAGTATGCCATGGGTGGGATATTTTCTGAAAAATCTGATGTCTACAGCTTCGGGGTACTGGTATTGGAGGTTATTAGTGGCAAGAAGAATACTAGCTTCTATTTATATGACCAACAGCTAGGCTTCCTTGCCTATGCATGGGAGTTGTGGAATGAAGGCATGGCATTGGAGTTAGTAGATGAAGTATTGGGTGATTCATATTCCTCATCAGAAGTAATGACATGCGTGCATGTTGGGCTTCTTTGTGTACAGGACAATGCTGCAGATAGACCAGCCATGGTGGATGTAGCTTCGATTCTAAGCAGCGAGAAAGATGGTCCACATCCGAAGAGACCTGTATTCACCATCCAAAACTCAATTTATCATCCTGGACCATGCTATGAAAATACAAATTCCTCCAAAAATGAAGCTAGCATGACAATAATTGAAGGACGTTAA

Protein Analysis

834

Amino Acids

92.8

Weight (kDa)

6.13

Isoelectric Point (pI)

39.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 74 - 173 1.4e-22 D-mannose binding lectin
S_locus_glycop PF00954 206 - 319 1.9e-25 S-locus glycoprotein domain
PAN_2 PF08276 350 - 413 4.8e-18 PAN-like domain
Pkinase PF00069 519 - 718 2.6e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 520 - 736 2.3e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1599
AccB1I GGYRCC 1 cut(s) 878
AccI GTMKAC 1 cut(s) 2109
AciI CCGC 2 cut(s) 294, 1276
AclWI GGATC 4 cut(s) 524, 610, 1490, 1821
AcsI RAATTY 4 cut(s) 499, 747, 1009, 2458
AcuI CTGAAG 6 cut(s) 25, 90, 139, 810, 1357, 1537
AcvI CACGTG 1 cut(s) 2051
AcyI GRCGYC 2 cut(s) 777, 879
AfaI GTAC 3 cut(s) 1092, 2124, 2316
AfiI CCNNNNNNNGG 3 cut(s) 539, 2082, 2205
AflIII ACRYGT 1 cut(s) 2048
AhlI ACTAGT 2 cut(s) 1294, 1442
AjnI CCWGG 5 cut(s) 127, 751, 1176, 1794, 2434
Alw21I GWGCWC 2 cut(s) 309, 658
Alw26I GTCTC 8 cut(s) 127, 840, 994, 1016, 1048, 1251, 2067, 2392
Alw44I GTGCAC 1 cut(s) 654
AlwI GGATC 4 cut(s) 524, 610, 1490, 1821
AlwNI CAGNNNCTG 1 cut(s) 1159
AoxI GGCC 1 cut(s) 626
ApaLI GTGCAC 1 cut(s) 654
ApeKI GCWGC 5 cut(s) 254, 288, 291, 2327, 2370
ApoI RAATTY 4 cut(s) 499, 747, 1009, 2458
AseI ATTAAT 1 cut(s) 597
AspLEI GCGC 5 cut(s) 68, 881, 1407, 1431, 1592
AspS9I GGNCC 6 cut(s) 626, 887, 984, 1218, 2384, 2438
AsuC2I CCSGG 1 cut(s) 540
AsuHPI GGTGA 5 cut(s) 528, 767, 1927, 2270, 2401
AsuNHI GCTAGC 1 cut(s) 2477
AvaII GGWCC 5 cut(s) 887, 984, 1218, 2384, 2438
BaeGI GKGCMC 1 cut(s) 658
BanI GGYRCC 1 cut(s) 878
BanII GRGCYC 1 cut(s) 309
BbrPI CACGTG 1 cut(s) 2051
BbsI GAAGAC 1 cut(s) 1363
Bbv12I GWGCWC 2 cut(s) 309, 658
BbvI GCAGC 5 cut(s) 266, 300, 303, 2314, 2382
BccI CCATC 8 cut(s) 308, 541, 1055, 1258, 1726, 1902, 2375, 2420
BceAI ACGGC 1 cut(s) 1442
BcgI CGANNNNNNTGC 2 cut(s) 1519, 1553
BciT130I CCWGG 5 cut(s) 129, 753, 1178, 1796, 2436
BciVI GTATCC 1 cut(s) 1792
BclI TGATCA 1 cut(s) 742
BcnI CCSGG 1 cut(s) 540
BcoDI GTCTC 8 cut(s) 127, 840, 994, 1016, 1048, 1251, 2067, 2392
BcuI ACTAGT 2 cut(s) 1294, 1442
BfmI CTRYAG 4 cut(s) 258, 363, 2110, 2328
BfoI RGCGCY 4 cut(s) 69, 882, 1408, 1432
BfuI GTATCC 1 cut(s) 1792
BglII AGATCT 2 cut(s) 509, 1264
BisI GCNGC 5 cut(s) 255, 289, 292, 2328, 2371
BlsI GCNGC 5 cut(s) 256, 290, 293, 2329, 2372
Bme1390I CCNGG 6 cut(s) 129, 540, 753, 1178, 1796, 2436
Bme18I GGWCC 5 cut(s) 887, 984, 1218, 2384, 2438
BmgT120I GGNCC 6 cut(s) 626, 887, 984, 1218, 2384, 2438
BmiI GGNNCC 1 cut(s) 880
BmrFI CCNGG 6 cut(s) 129, 540, 753, 1178, 1796, 2436
BmrI ACTGGG 1 cut(s) 17
BmsI GCATC 1 cut(s) 1677
BmtI GCTAGC 1 cut(s) 2481
BmuI ACTGGG 1 cut(s) 17
BpiI GAAGAC 1 cut(s) 1363
BpmI CTGGAG 3 cut(s) 323, 637, 2049
Bpu10I CCTNAGC 1 cut(s) 1654
BpuEI CTTGAG 1 cut(s) 526
BpuMI CCSGG 1 cut(s) 540
BsaAI YACGTR 1 cut(s) 2051
BsaHI GRCGYC 2 cut(s) 777, 879
BsaI GGTCTC 2 cut(s) 840, 2392
BsaJI CCNNGG 8 cut(s) 267, 539, 629, 686, 1137, 1500, 2076, 2343
BsaWI WCCGGW 1 cut(s) 986
BsaXI ACNNNNNCTCC 4 cut(s) 70, 100, 981, 1011
Bsc4I CCNNNNNNNGG 3 cut(s) 539, 2082, 2205
Bse1I ACTGG 6 cut(s) 12, 620, 836, 848, 986, 2130
BseBI CCWGG 5 cut(s) 129, 753, 1178, 1796, 2436
BseDI CCNNGG 8 cut(s) 267, 539, 629, 686, 1137, 1500, 2076, 2343
BseGI GGATG 9 cut(s) 998, 1611, 1734, 1759, 1960, 2356, 2389, 2412, 2431
BseLI CCNNNNNNNGG 3 cut(s) 539, 2082, 2205
BseMII CTCAG 6 cut(s) 686, 1151, 1302, 1668, 1992, 2045
BseNI ACTGG 6 cut(s) 12, 620, 836, 848, 986, 2130
BseSI GKGCMC 1 cut(s) 658
BseXI GCAGC 5 cut(s) 266, 300, 303, 2314, 2382
BshFI GGCC 1 cut(s) 628
BshNI GGYRCC 1 cut(s) 878
BsiHKAI GWGCWC 2 cut(s) 309, 658
BsiSI CCGG 2 cut(s) 539, 987
BslI CCNNNNNNNGG 3 cut(s) 539, 2082, 2205
BsmAI GTCTC 8 cut(s) 127, 840, 994, 1016, 1048, 1251, 2067, 2392
BsmBI CGTCTC 2 cut(s) 994, 1016
BsmI GAATGC 1 cut(s) 1396
BsnI GGCC 1 cut(s) 628
Bso31I GGTCTC 2 cut(s) 840, 2392
Bsp1286I GDGCHC 2 cut(s) 309, 658
Bsp1407I TGTACA 1 cut(s) 2314
Bsp143I GATC 9 cut(s) 509, 529, 585, 602, 742, 1264, 1495, 1695, 1813
Bsp19I CCATGG 4 cut(s) 629, 686, 2076, 2343
BspACI CCGC 2 cut(s) 294, 1276
BspANI GGCC 1 cut(s) 628
BspCNI CTCAG 6 cut(s) 685, 1152, 1301, 1667, 1991, 2044
BspHI TCATGA 2 cut(s) 1102, 1897
BspLI GGNNCC 1 cut(s) 880
BspMAI CTGCAG 2 cut(s) 367, 2332
BspOI GCTAGC 1 cut(s) 2481
BspPI GGATC 4 cut(s) 524, 610, 1490, 1821
BspT107I GGYRCC 1 cut(s) 878
BspTNI GGTCTC 2 cut(s) 840, 2392
BsrGI TGTACA 1 cut(s) 2314
BsrI ACTGG 6 cut(s) 12, 620, 836, 848, 986, 2130
BssECI CCNNGG 8 cut(s) 267, 539, 629, 686, 1137, 1500, 2076, 2343
BssMI GATC 9 cut(s) 509, 529, 585, 602, 742, 1264, 1495, 1695, 1813
BssNI GRCGYC 2 cut(s) 777, 879
BssT1I CCWWGG 5 cut(s) 267, 629, 686, 2076, 2343
Bst2UI CCWGG 5 cut(s) 129, 753, 1178, 1796, 2436
Bst4CI ACNGT 3 cut(s) 60, 1155, 1245
Bst6I CTCTTC 3 cut(s) 1665, 1817, 2390
BstACI GRCGYC 2 cut(s) 777, 879
BstAUI TGTACA 1 cut(s) 2314
BstBAI YACGTR 1 cut(s) 2051
BstC8I GCNNGC 6 cut(s) 576, 802, 1327, 1996, 2294, 2479
BstDEI CTNAG 9 cut(s) 373, 672, 1160, 1288, 1357, 1654, 1978, 2031, 2366
BstDSI CCRYGG 4 cut(s) 629, 686, 2076, 2343
BstF5I GGATG 9 cut(s) 998, 1611, 1734, 1759, 1960, 2356, 2389, 2412, 2431
BstH2I RGCGCY 4 cut(s) 69, 882, 1408, 1432
BstHHI GCGC 5 cut(s) 68, 881, 1407, 1431, 1592
BstKTI GATC 9 cut(s) 512, 532, 588, 605, 745, 1267, 1498, 1698, 1816
BstMAI GTCTC 8 cut(s) 127, 840, 994, 1016, 1048, 1251, 2067, 2392
BstMBI GATC 9 cut(s) 509, 529, 585, 602, 742, 1264, 1495, 1695, 1813
BstMWI GCNNNNNNNGC 2 cut(s) 776, 2302
BstNI CCWGG 5 cut(s) 129, 753, 1178, 1796, 2436
BstNSI RCATGY 3 cut(s) 466, 2292, 2300
BstSCI CCNGG 6 cut(s) 127, 538, 751, 1176, 1794, 2434
BstSFI CTRYAG 4 cut(s) 258, 363, 2110, 2328
BstSLI GKGCMC 1 cut(s) 658
BstV1I GCAGC 5 cut(s) 266, 300, 303, 2314, 2382
BstV2I GAAGAC 1 cut(s) 1363
BstX2I RGATCY 4 cut(s) 509, 602, 1264, 1813
BstYI RGATCY 4 cut(s) 509, 602, 1264, 1813
BsuI GTATCC 1 cut(s) 1792
BsuRI GGCC 1 cut(s) 628
BtgI CCRYGG 4 cut(s) 629, 686, 2076, 2343
BtsCI GGATG 9 cut(s) 998, 1611, 1734, 1759, 1960, 2356, 2389, 2412, 2431
BtsIMutI CAGTG 3 cut(s) 56, 613, 1160
Cac8I GCNNGC 6 cut(s) 576, 802, 1327, 1996, 2294, 2479
CaiI CAGNNNCTG 1 cut(s) 1159
CciI TCATGA 2 cut(s) 1102, 1897
CfoI GCGC 5 cut(s) 68, 881, 1407, 1431, 1592
Cfr13I GGNCC 6 cut(s) 626, 887, 984, 1218, 2384, 2438
CseI GACGC 2 cut(s) 785, 1033
Csp6I GTAC 3 cut(s) 1091, 2123, 2315
CviQI GTAC 3 cut(s) 1091, 2123, 2315
DdeI CTNAG 9 cut(s) 373, 672, 1160, 1288, 1357, 1654, 1978, 2031, 2366
DinI GGCGCC 1 cut(s) 880
DpnI GATC 9 cut(s) 511, 531, 587, 604, 744, 1266, 1497, 1697, 1815
DpnII GATC 9 cut(s) 509, 529, 585, 602, 742, 1264, 1495, 1695, 1813
DraI TTTAAA 1 cut(s) 1932
Eam1104I CTCTTC 3 cut(s) 1665, 1817, 2390
EarI CTCTTC 3 cut(s) 1665, 1817, 2390
EciI GGCGGA 1 cut(s) 1265
Ecl136II GAGCTC 1 cut(s) 307
Eco130I CCWWGG 5 cut(s) 267, 629, 686, 2076, 2343
Eco24I GRGCYC 1 cut(s) 309
Eco31I GGTCTC 2 cut(s) 840, 2392
Eco47I GGWCC 5 cut(s) 887, 984, 1218, 2384, 2438
Eco53kI GAGCTC 1 cut(s) 307
Eco57I CTGAAG 6 cut(s) 25, 90, 139, 810, 1357, 1537
Eco72I CACGTG 1 cut(s) 2051
EcoICRI GAGCTC 1 cut(s) 307
EcoRII CCWGG 5 cut(s) 127, 751, 1176, 1794, 2434
EcoT14I CCWWGG 5 cut(s) 267, 629, 686, 2076, 2343
EcoT22I ATGCAT 1 cut(s) 2206
EcoT38I GRGCYC 1 cut(s) 309
EgeI GGCGCC 1 cut(s) 880
EheI GGCGCC 1 cut(s) 880
ErhI CCWWGG 5 cut(s) 267, 629, 686, 2076, 2343
Esp3I CGTCTC 2 cut(s) 994, 1016
FalI AAGNNNNNCTT 2 cut(s) 1251, 1283
FauI CCCGC 1 cut(s) 287
FauNDI CATATG 2 cut(s) 772, 958
FbaI TGATCA 1 cut(s) 742
FblI GTMKAC 1 cut(s) 2109
Fnu4HI GCNGC 5 cut(s) 255, 289, 292, 2328, 2371
FokI GGATG 9 cut(s) 1005, 1618, 1741, 1766, 1967, 2363, 2376, 2399, 2418
FriOI GRGCYC 1 cut(s) 309
Fsp4HI GCNGC 5 cut(s) 255, 289, 292, 2328, 2371
GlaI GCGC 5 cut(s) 67, 880, 1406, 1430, 1591
GluI GCNGC 5 cut(s) 255, 289, 292, 2328, 2371
GsuI CTGGAG 3 cut(s) 323, 637, 2049
HaeII RGCGCY 4 cut(s) 69, 882, 1408, 1432
HaeIII GGCC 1 cut(s) 628
HapII CCGG 2 cut(s) 539, 987
HgaI GACGC 2 cut(s) 785, 1033
HhaI GCGC 5 cut(s) 68, 881, 1407, 1431, 1592
Hin1I GRCGYC 2 cut(s) 777, 879
Hin6I GCGC 5 cut(s) 66, 879, 1405, 1429, 1590
HinP1I GCGC 5 cut(s) 66, 879, 1405, 1429, 1590
HpaII CCGG 2 cut(s) 539, 987
HphI GGTGA 5 cut(s) 528, 767, 1927, 2270, 2401
Hpy166II GTNNAC 5 cut(s) 656, 887, 2110, 2315, 2387
Hpy188III TCNNGA 8 cut(s) 302, 489, 505, 1103, 1127, 1678, 1898, 2066
Hpy8I GTNNAC 5 cut(s) 656, 887, 2110, 2315, 2387
HpyCH4III ACNGT 3 cut(s) 60, 1155, 1245
HpyCH4IV ACGT 2 cut(s) 2050, 2500
HpyF10VI GCNNNNNNNGC 2 cut(s) 776, 2302
HpyF3I CTNAG 9 cut(s) 373, 672, 1160, 1288, 1357, 1654, 1978, 2031, 2366
HpySE526I ACGT 2 cut(s) 2050, 2500
Hsp92I GRCGYC 2 cut(s) 777, 879
HspAI GCGC 5 cut(s) 66, 879, 1405, 1429, 1590
KasI GGCGCC 1 cut(s) 878
Ksp22I TGATCA 1 cut(s) 742
Kzo9I GATC 9 cut(s) 509, 529, 585, 602, 742, 1264, 1495, 1695, 1813
LmnI GCTCC 4 cut(s) 304, 410, 716, 1504
Lsp1109I GCAGC 5 cut(s) 266, 300, 303, 2314, 2382
LweI GCATC 1 cut(s) 1677
MaeII ACGT 2 cut(s) 2050, 2500
MaeIII GTNAC 9 cut(s) 16, 54, 443, 706, 755, 866, 1608, 1761, 1940
MalI GATC 9 cut(s) 511, 531, 587, 604, 744, 1266, 1497, 1697, 1815
MboI GATC 9 cut(s) 509, 529, 585, 602, 742, 1264, 1495, 1695, 1813
MfeI CAATTG 1 cut(s) 1338
MflI RGATCY 4 cut(s) 509, 602, 1264, 1813
MhlI GDGCHC 2 cut(s) 309, 658
Mly113I GGCGCC 1 cut(s) 879
MlyI GAGTC 3 cut(s) 307, 440, 685
MmeI TCCRAC 1 cut(s) 2023
Mph1103I ATGCAT 1 cut(s) 2206
MseI TTAA 9 cut(s) 597, 840, 1319, 1418, 1452, 1746, 1854, 1931, 2503
MslI CAYNNNNRTG 2 cut(s) 467, 1032
MspA1I CMGCKG 1 cut(s) 294
MspI CCGG 2 cut(s) 539, 987
MspR9I CCNGG 6 cut(s) 129, 540, 753, 1178, 1796, 2436
MunI CAATTG 1 cut(s) 1338
Mva1269I GAATGC 1 cut(s) 1396
MvaI CCWGG 5 cut(s) 129, 753, 1178, 1796, 2436
MwoI GCNNNNNNNGC 2 cut(s) 776, 2302
NarI GGCGCC 1 cut(s) 879
NciI CCSGG 1 cut(s) 540
NcoI CCATGG 4 cut(s) 629, 686, 2076, 2343
NdeI CATATG 2 cut(s) 772, 958
NdeII GATC 9 cut(s) 509, 529, 585, 602, 742, 1264, 1495, 1695, 1813
NheI GCTAGC 1 cut(s) 2477
NlaIV GGNNCC 1 cut(s) 880
NmuCI GTSAC 5 cut(s) 54, 443, 706, 755, 866
NsiI ATGCAT 1 cut(s) 2206
NspI RCATGY 3 cut(s) 466, 2292, 2300
PagI TCATGA 2 cut(s) 1102, 1897
PctI GAATGC 1 cut(s) 1396
PfeI GAWTC 8 cut(s) 668, 1037, 1436, 1456, 1901, 1966, 2261, 2362
PfoI TCCNGGA 1 cut(s) 2434
PkrI GCNGC 5 cut(s) 256, 290, 293, 2329, 2372
PleI GAGTC 3 cut(s) 306, 440, 685
PluTI GGCGCC 1 cut(s) 882
PmaCI CACGTG 1 cut(s) 2051
PmlI CACGTG 1 cut(s) 2051
PpsI GAGTC 3 cut(s) 306, 440, 685
Ppu21I YACGTR 1 cut(s) 2051
PshBI ATTAAT 1 cut(s) 597
PsiI TTATAA 1 cut(s) 1599
Psp124BI GAGCTC 1 cut(s) 309
Psp6I CCWGG 5 cut(s) 127, 751, 1176, 1794, 2434
PspCI CACGTG 1 cut(s) 2051
PspGI CCWGG 5 cut(s) 127, 751, 1176, 1794, 2434
PspN4I GGNNCC 1 cut(s) 880
PspPI GGNCC 6 cut(s) 626, 887, 984, 1218, 2384, 2438
PstI CTGCAG 2 cut(s) 367, 2332
PstNI CAGNNNCTG 1 cut(s) 1159
PsuI RGATCY 4 cut(s) 509, 602, 1264, 1813
RsaI GTAC 3 cut(s) 1092, 2124, 2316
RsaNI GTAC 3 cut(s) 1091, 2123, 2315
RseI CAYNNNNRTG 2 cut(s) 467, 1032
SacI GAGCTC 1 cut(s) 309
SaqAI TTAA 9 cut(s) 597, 840, 1319, 1418, 1452, 1746, 1854, 1931, 2503
SatI GCNGC 5 cut(s) 255, 289, 292, 2328, 2371
Sau3AI GATC 9 cut(s) 509, 529, 585, 602, 742, 1264, 1495, 1695, 1813
Sau96I GGNCC 6 cut(s) 626, 887, 984, 1218, 2384, 2438
SchI GAGTC 3 cut(s) 307, 440, 685
ScrFI CCNGG 6 cut(s) 129, 540, 753, 1178, 1796, 2436
SduI GDGCHC 2 cut(s) 309, 658
SfaNI GCATC 1 cut(s) 1677
SfcI CTRYAG 4 cut(s) 258, 363, 2110, 2328
SfoI GGCGCC 1 cut(s) 880
SinI GGWCC 5 cut(s) 887, 984, 1218, 2384, 2438
SmiMI CAYNNNNRTG 2 cut(s) 467, 1032
SmlI CTYRAG 1 cut(s) 505
SmoI CTYRAG 1 cut(s) 505
SpeI ACTAGT 2 cut(s) 1294, 1442
SsiI CCGC 2 cut(s) 294, 1276
SspDI GGCGCC 1 cut(s) 878
SspI AATATT 2 cut(s) 138, 1858
SstI GAGCTC 1 cut(s) 309
StyD4I CCNGG 6 cut(s) 127, 538, 751, 1176, 1794, 2434
StyI CCWWGG 5 cut(s) 267, 629, 686, 2076, 2343
TaaI ACNGT 3 cut(s) 60, 1155, 1245
TaiI ACGT 2 cut(s) 2053, 2503
TaqI TCGA 4 cut(s) 1413, 1474, 1668, 2360
TaqII GACCGA 1 cut(s) 1562
TatI WGTACW 1 cut(s) 2314
TfiI GAWTC 8 cut(s) 668, 1037, 1436, 1456, 1901, 1966, 2261, 2362
Tru1I TTAA 9 cut(s) 597, 840, 1319, 1418, 1452, 1746, 1854, 1931, 2503
Tru9I TTAA 9 cut(s) 597, 840, 1319, 1418, 1452, 1746, 1854, 1931, 2503
TscAI CASTG 3 cut(s) 63, 620, 1160
TseFI GTSAC 5 cut(s) 54, 443, 706, 755, 866
TseI GCWGC 5 cut(s) 254, 288, 291, 2327, 2370
Tsp45I GTSAC 5 cut(s) 54, 443, 706, 755, 866
TspRI CASTG 3 cut(s) 63, 620, 1160
VneI GTGCAC 1 cut(s) 654
VpaK11BI GGWCC 5 cut(s) 887, 984, 1218, 2384, 2438
VspI ATTAAT 1 cut(s) 597
XapI RAATTY 4 cut(s) 499, 747, 1009, 2458
XbaI TCTAGA 1 cut(s) 1126
XceI RCATGY 3 cut(s) 466, 2292, 2300
XcmI CCANNNNNNNNNTGG 4 cut(s) 403, 620, 1207, 1792
XmiI GTMKAC 1 cut(s) 2109
Zsp2I ATGCAT 1 cut(s) 2206
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.