MD17G1248100.v1.1

Protein kinase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0000033
Physical Location & Seq
Reverse (-)
29694118 .. 29696064
1947 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1248100.v1.1.491

Sequence Viewer

Length: 1113 bp
ATGAGAGCTAAGCAAAAAGGACACATCAAATTAACAAGGAAACACATCAAAATAACAAGGGACACCCTTCAAGAATATATAGGTGGAAAACATGATCTGTCTGAGTTAATGATCTATGATTTTGATAGCATATTAGTTGCTACGGACAATTTCAGCATAGAAAACAAACTCGGGCAAGGAGGCTTTGGTCCAGTTTATTGGGGTAAGCTAGCAGAAGGGAAGGAAATAGCAGTAAAAAGACTATCCAGTACCTCAGGGCAAGGTGTAGTGGAGTTCAAGAATGAAATGTTATTGATCTCCAATCTCCAACACAAAAATCTGGTCAGAATCATGGGTTGCTGCGTTAAAGAGGATGAGAAGTTACTGATTTATGAGTTCATGCCAAACAAAAGCTTGGATACTTTTCTTTTCGATTCGACGAGAAGAGTAGTGCTTGATTGGGGTACACGTTTTAATATTATTCAAGGTGTTGCCAGAGGGCTTGTTTATCTCCATCACGATTCGTATTTGAAGGTAATACATAGAGATCTAAAAGTGAGCAACATTCTTTTGGATGAGAAAATGAACCCAAAAATTTCAGATTTTGGATTGGCACGTTCAGTTGAAGGGACACAGAATTTAGAAAATACTCAGAGAGTTGCCGGAACGCGTGGATATATGTCTCCGGAGTATGCCATGGGTGGAATATTTTCTCAAAAATCTGATGTCTACAGCTTTGGGGTCTTCGTATTGGAGATTATCAACAGCAAGAAGAATACCGCCTTCTATATCTATGATCGACAGCTAGGCTTACTAGCCTATGCATGGCAGCTATGGAAGGAAGGCAGGGAATTGGAGTTGGTAGATGAAATGCTGGCGGCTGAATCATATTCGGCTTCAGAAGTAATGAAATATGTGCATATTGGGCTGCTTTGTGTACAGGACAATGCGATGGATAGGCCGAGCATGCAGGATGTAGTTTTTATGCTAAATGGTTCCACAACTGTAATTGGTGGTGCACAACCTAAGCAGCCTCTATTCACTATCCAAAACACAGTCTCTCATCCTCAACCACAGCCTTCGAATACTTTCCTCACAAATGAAGCTACAACGACACTGATTGAAGGACGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase_Tyr WAK_assoc

Protein Analysis

371

Amino Acids

41.87

Weight (kDa)

7.13

Isoelectric Point (pI)

40.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 52 - 320 4.8e-47 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 52 - 252 6.2e-43 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 708
AccII CGCG 1 cut(s) 649
AccIII TCCGGA 1 cut(s) 664
AciI CCGC 2 cut(s) 759, 857
AcsI RAATTY 2 cut(s) 573, 616
AcuI CTGAAG 1 cut(s) 861
AfaI GTAC 3 cut(s) 250, 445, 918
AfiI CCNNNNNNNGG 1 cut(s) 804
AflIII ACRYGT 2 cut(s) 446, 647
AgsI TTSAA 6 cut(s) 71, 277, 464, 511, 605, 1103
AluBI AGCT 7 cut(s) 8, 208, 393, 714, 784, 811, 1085
AluI AGCT 7 cut(s) 8, 208, 393, 714, 784, 811, 1085
Alw21I GWGCWC 1 cut(s) 1000
Alw26I GTCTC 2 cut(s) 666, 1042
Alw44I GTGCAC 1 cut(s) 996
Ama87I CYCGRG 1 cut(s) 170
Aor13HI TCCGGA 1 cut(s) 664
AoxI GGCC 1 cut(s) 938
ApaLI GTGCAC 1 cut(s) 996
ApeKI GCWGC 4 cut(s) 339, 808, 907, 1009
ApoI RAATTY 2 cut(s) 573, 616
ArsI GACNNNNNNTTYG 2 cut(s) 306, 338
Asp700I GAANNNNTTC 2 cut(s) 688, 1067
AspS9I GGNCC 1 cut(s) 188
AsuII TTCGAA 1 cut(s) 1061
AsuNHI GCTAGC 1 cut(s) 208
AvaI CYCGRG 1 cut(s) 170
AvaII GGWCC 1 cut(s) 188
AxyI CCTNAGG 1 cut(s) 253
BaeGI GKGCMC 1 cut(s) 1000
BbsI GAAGAC 1 cut(s) 715
Bbv12I GWGCWC 1 cut(s) 1000
BbvI GCAGC 4 cut(s) 326, 820, 894, 1021
BccI CCATC 2 cut(s) 501, 925
BciVI GTATCC 1 cut(s) 391
BcoDI GTCTC 2 cut(s) 666, 1042
BfaI CTAG 4 cut(s) 209, 785, 794, 1111
BfmI CTRYAG 1 cut(s) 709
BfuI GTATCC 1 cut(s) 391
BglII AGATCT 1 cut(s) 526
BisI GCNGC 5 cut(s) 340, 809, 858, 908, 1010
BlpI GCTNAGC 1 cut(s) 9
BlsI GCNGC 5 cut(s) 341, 810, 859, 909, 1011
Bme18I GGWCC 1 cut(s) 188
BmeT110I CYCGRG 1 cut(s) 170
BmgT120I GGNCC 1 cut(s) 188
BmiI GGNNCC 1 cut(s) 976
BmtI GCTAGC 1 cut(s) 212
BpiI GAAGAC 1 cut(s) 715
Bpu10I CCTNAGC 1 cut(s) 1005
Bpu1102I GCTNAGC 1 cut(s) 9
Bpu14I TTCGAA 1 cut(s) 1061
BsaJI CCNNGG 1 cut(s) 675
BsaWI WCCGGW 1 cut(s) 664
Bsc4I CCNNNNNNNGG 1 cut(s) 804
Bse1I ACTGG 2 cut(s) 191, 246
Bse21I CCTNAGG 1 cut(s) 253
BseAI TCCGGA 1 cut(s) 664
BseDI CCNNGG 1 cut(s) 675
BseGI GGATG 4 cut(s) 358, 559, 958, 1042
BseLI CCNNNNNNNGG 1 cut(s) 804
BseMII CTCAG 3 cut(s) 93, 267, 644
BseNI ACTGG 2 cut(s) 191, 246
BseSI GKGCMC 1 cut(s) 1000
BseXI GCAGC 4 cut(s) 326, 820, 894, 1021
Bsh1236I CGCG 1 cut(s) 649
BshFI GGCC 1 cut(s) 940
BsiHKAI GWGCWC 1 cut(s) 1000
BsiHKCI CYCGRG 1 cut(s) 170
BsiSI CCGG 2 cut(s) 642, 665
BslFI GGGAC 2 cut(s) 74, 622
BslI CCNNNNNNNGG 1 cut(s) 804
BsmAI GTCTC 2 cut(s) 666, 1042
BsmFI GGGAC 2 cut(s) 74, 622
BsnI GGCC 1 cut(s) 940
BsoBI CYCGRG 1 cut(s) 170
Bsp119I TTCGAA 1 cut(s) 1061
Bsp1286I GDGCHC 1 cut(s) 1000
Bsp13I TCCGGA 1 cut(s) 664
Bsp1407I TGTACA 1 cut(s) 916
Bsp143I GATC 5 cut(s) 94, 111, 294, 526, 775
Bsp1720I GCTNAGC 1 cut(s) 9
Bsp19I CCATGG 1 cut(s) 675
BspACI CCGC 2 cut(s) 759, 857
BspANI GGCC 1 cut(s) 940
BspCNI CTCAG 3 cut(s) 94, 266, 643
BspEI TCCGGA 1 cut(s) 664
BspFNI CGCG 1 cut(s) 649
BspLI GGNNCC 1 cut(s) 976
BspOI GCTAGC 1 cut(s) 212
BspT104I TTCGAA 1 cut(s) 1061
BsrGI TGTACA 1 cut(s) 916
BsrI ACTGG 2 cut(s) 191, 246
BssECI CCNNGG 1 cut(s) 675
BssMI GATC 5 cut(s) 94, 111, 294, 526, 775
BssT1I CCWWGG 1 cut(s) 675
Bst4CI ACNGT 2 cut(s) 985, 1036
Bst6I CTCTTC 1 cut(s) 418
BstAUI TGTACA 1 cut(s) 916
BstBI TTCGAA 1 cut(s) 1061
BstC8I GCNNGC 3 cut(s) 210, 855, 947
BstDEI CTNAG 5 cut(s) 9, 102, 253, 630, 1005
BstDSI CCRYGG 1 cut(s) 675
BstF5I GGATG 4 cut(s) 358, 559, 958, 1042
BstFNI CGCG 1 cut(s) 649
BstKTI GATC 5 cut(s) 97, 114, 297, 529, 778
BstMAI GTCTC 2 cut(s) 666, 1042
BstMBI GATC 5 cut(s) 94, 111, 294, 526, 775
BstMWI GCNNNNNNNGC 2 cut(s) 904, 946
BstNSI RCATGY 1 cut(s) 949
BstSFI CTRYAG 1 cut(s) 709
BstSLI GKGCMC 1 cut(s) 1000
BstUI CGCG 1 cut(s) 649
BstV1I GCAGC 4 cut(s) 326, 820, 894, 1021
BstV2I GAAGAC 1 cut(s) 715
BstX2I RGATCY 1 cut(s) 526
BstXI CCANNNNNNTGG 1 cut(s) 198
BstYI RGATCY 1 cut(s) 526
Bsu36I CCTNAGG 1 cut(s) 253
BsuI GTATCC 1 cut(s) 391
BsuRI GGCC 1 cut(s) 940
BtgI CCRYGG 1 cut(s) 675
BtgZI GCGATG 1 cut(s) 944
BtsCI GGATG 4 cut(s) 358, 559, 958, 1042
BtsIMutI CAGTG 1 cut(s) 1094
Cac8I GCNNGC 3 cut(s) 210, 855, 947
Cfr13I GGNCC 1 cut(s) 188
Csp6I GTAC 3 cut(s) 249, 444, 917
CviAII CATG 6 cut(s) 92, 331, 379, 676, 804, 946
CviQI GTAC 3 cut(s) 249, 444, 917
DdeI CTNAG 5 cut(s) 9, 102, 253, 630, 1005
DpnI GATC 5 cut(s) 96, 113, 296, 528, 777
DpnII GATC 5 cut(s) 94, 111, 294, 526, 775
Eam1104I CTCTTC 1 cut(s) 418
EarI CTCTTC 1 cut(s) 418
Eco130I CCWWGG 1 cut(s) 675
Eco47I GGWCC 1 cut(s) 188
Eco57I CTGAAG 1 cut(s) 861
Eco81I CCTNAGG 1 cut(s) 253
Eco88I CYCGRG 1 cut(s) 170
EcoT14I CCWWGG 1 cut(s) 675
EcoT22I ATGCAT 1 cut(s) 805
ErhI CCWWGG 1 cut(s) 675
FaeI CATG 6 cut(s) 95, 334, 382, 679, 807, 949
FaqI GGGAC 2 cut(s) 74, 622
FatI CATG 6 cut(s) 91, 330, 378, 675, 803, 945
FblI GTMKAC 1 cut(s) 708
Fnu4HI GCNGC 5 cut(s) 340, 809, 858, 908, 1010
FokI GGATG 4 cut(s) 365, 566, 965, 1029
Fsp4HI GCNGC 5 cut(s) 340, 809, 858, 908, 1010
FspBI CTAG 4 cut(s) 209, 785, 794, 1111
GluI GCNGC 5 cut(s) 340, 809, 858, 908, 1010
HaeIII GGCC 1 cut(s) 940
HapII CCGG 2 cut(s) 642, 665
Hin1II CATG 6 cut(s) 95, 334, 382, 679, 807, 949
HindIII AAGCTT 1 cut(s) 391
HinfI GANTC 4 cut(s) 327, 413, 500, 863
HpaII CCGG 2 cut(s) 642, 665
Hpy166II GTNNAC 4 cut(s) 446, 709, 917, 998
Hpy188I TCNGA 6 cut(s) 103, 326, 580, 633, 703, 880
Hpy188III TCNNGA 4 cut(s) 71, 277, 497, 665
Hpy8I GTNNAC 4 cut(s) 446, 709, 917, 998
Hpy99I CGWCG 1 cut(s) 421
HpyCH4III ACNGT 2 cut(s) 985, 1036
HpyCH4IV ACGT 2 cut(s) 448, 595
HpyCH4V TGCA 4 cut(s) 803, 898, 949, 998
HpyF10VI GCNNNNNNNGC 2 cut(s) 904, 946
HpyF3I CTNAG 5 cut(s) 9, 102, 253, 630, 1005
HpySE526I ACGT 2 cut(s) 448, 595
Hsp92II CATG 6 cut(s) 95, 334, 382, 679, 807, 949
Kpn2I TCCGGA 1 cut(s) 664
Kzo9I GATC 5 cut(s) 94, 111, 294, 526, 775
Lsp1109I GCAGC 4 cut(s) 326, 820, 894, 1021
MaeI CTAG 4 cut(s) 209, 785, 794, 1111
MaeII ACGT 2 cut(s) 448, 595
MaeIII GTNAC 1 cut(s) 360
MalI GATC 5 cut(s) 96, 113, 296, 528, 777
MboI GATC 5 cut(s) 94, 111, 294, 526, 775
MboII GAAGA 3 cut(s) 435, 715, 763
MflI RGATCY 1 cut(s) 526
MhlI GDGCHC 1 cut(s) 1000
MluCI AATT 6 cut(s) 29, 148, 573, 616, 830, 987
MluI ACGCGT 1 cut(s) 647
MmeI TCCRAC 1 cut(s) 331
MnlI CCTC 7 cut(s) 173, 262, 343, 470, 1023, 1056, 1082
Mph1103I ATGCAT 1 cut(s) 805
MroI TCCGGA 1 cut(s) 664
MroXI GAANNNNTTC 2 cut(s) 688, 1067
MseI TTAA 4 cut(s) 32, 107, 345, 453
MspI CCGG 2 cut(s) 642, 665
MvnI CGCG 1 cut(s) 649
MwoI GCNNNNNNNGC 2 cut(s) 904, 946
NcoI CCATGG 1 cut(s) 675
NdeII GATC 5 cut(s) 94, 111, 294, 526, 775
NheI GCTAGC 1 cut(s) 208
NlaIII CATG 6 cut(s) 95, 334, 382, 679, 807, 949
NlaIV GGNNCC 1 cut(s) 976
NmeAIII GCCGAG 1 cut(s) 966
NsiI ATGCAT 1 cut(s) 805
NspI RCATGY 1 cut(s) 949
NspV TTCGAA 1 cut(s) 1061
PaeI GCATGC 1 cut(s) 949
PdmI GAANNNNTTC 2 cut(s) 688, 1067
PfeI GAWTC 4 cut(s) 327, 413, 500, 863
PkrI GCNGC 5 cut(s) 341, 810, 859, 909, 1011
PspN4I GGNNCC 1 cut(s) 976
PspPI GGNCC 1 cut(s) 188
PsuI RGATCY 1 cut(s) 526
RsaI GTAC 3 cut(s) 250, 445, 918
RsaNI GTAC 3 cut(s) 249, 444, 917
SaqAI TTAA 4 cut(s) 32, 107, 345, 453
SatI GCNGC 5 cut(s) 340, 809, 858, 908, 1010
Sau3AI GATC 5 cut(s) 94, 111, 294, 526, 775
Sau96I GGNCC 1 cut(s) 188
SduI GDGCHC 1 cut(s) 1000
SfcI CTRYAG 1 cut(s) 709
SfuI TTCGAA 1 cut(s) 1061
SinI GGWCC 1 cut(s) 188
SphI GCATGC 1 cut(s) 949
Sse9I AATT 6 cut(s) 29, 148, 573, 616, 830, 987
SsiI CCGC 2 cut(s) 759, 857
SspI AATATT 2 cut(s) 457, 687
SspMI CTAG 4 cut(s) 209, 785, 794, 1111
StyI CCWWGG 1 cut(s) 675
TaaI ACNGT 2 cut(s) 985, 1036
TaiI ACGT 2 cut(s) 451, 598
TaqI TCGA 4 cut(s) 411, 416, 778, 1061
TasI AATT 6 cut(s) 29, 148, 573, 616, 830, 987
TatI WGTACW 1 cut(s) 916
TauI GCSGC 1 cut(s) 860
TfiI GAWTC 4 cut(s) 327, 413, 500, 863
Tru1I TTAA 4 cut(s) 32, 107, 345, 453
Tru9I TTAA 4 cut(s) 32, 107, 345, 453
TscAI CASTG 1 cut(s) 1101
TseI GCWGC 4 cut(s) 339, 808, 907, 1009
TspDTI ATGAA 6 cut(s) 297, 367, 578, 861, 902, 1095
TspGWI ACGGA 1 cut(s) 158
TspRI CASTG 1 cut(s) 1101
VneI GTGCAC 1 cut(s) 996
VpaK11BI GGWCC 1 cut(s) 188
XapI RAATTY 2 cut(s) 573, 616
XceI RCATGY 1 cut(s) 949
XmiI GTMKAC 1 cut(s) 708
XmnI GAANNNNTTC 2 cut(s) 688, 1067
XspI CTAG 4 cut(s) 209, 785, 794, 1111
Zsp2I ATGCAT 1 cut(s) 805
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.