Rroxscaffold_1G00070410

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
91317607 .. 91321353
3747 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00070410.1

Sequence Viewer

Length: 2535 bp
ATGGATATTGAATCTGGAAGTGTTAGCTGCTTAAATCTCTCCATGTTCTTCTTATTCATCTTAATCTTACTTCCACCACATTATCATTGTTCTCAGCAAGTTTATAACATAACTCCTTCCCAACCATTGGCACATGGACAGACTCTTGTCTCCTCTGGCCGCATTTTCGAATTGGGTTTCTTCAGTCCTAATGGTTCTGCTAAAAAGTATGTGGGGTTATGGCAAAAGAATGTACTTCCGCGTAAAGTAGTGTGGGTGGCCAACAGAGAAAATCCTCTTGCAGTTGCAGACAACTTGGCTACTTTGAGAGTTGGCAGCAATGGGAATCTGGAGCTTGTAGATGGGAAGCAGATATCTGTCTGGTCAACCAATACTACATTTCAGGTGCCATCATCTACTACTAGTTCAGTCATTGCATCTCTTTTAGACAATGGAAACTTCGTTGTCGAATACAGTGGCTATCAATTGTGGGGGAGTTTTGATTACCCTGCTGACACAATCCTAAAAGACCAGCTGCTGGGCTTTGAGACCAAATCTGGAAGAAAGAATGTCATGACTTCCTGGAAAAGTGAAAGTGATCCATCAACTGGGAAGTATTCGGTTGGACTGACACCTGAGACACCATCACAAGTGTTCATTTGGATCAATGGATCAATTCCCTATTGGAGGAGTGGGCCTTGGGATAGATCAAAGTTCATTGGCATACCAGATATGGATGATCGATATGGAAGTGGATTTAGTCTTAATGAGAATTTAACAGCAAAGTACTTCTCTTATAGTTTTTCTGACAGTACTCTCGCATATTTAGACATCTCTTCAGAAGGAAGATCAAAGCTTATGCTGTCAGAAAGTGGCAAGGACTGGTATCCAAACTTCAGTGCACCAACTAATCCCTGCGACAATTATGGAGCATGCGGACCTTTTGGTGTTTGCAAAGCTTTTGAATCTCCAATATGTAGGTGTTTGAAAGGGTTTGTACCAAAGTCAGATGAGGAATGGAGCAAAGGAACCTGGACAGGAGGTTGTGTGAGGCGAAACAAATTGTCTTGTCAAAGTGACACAATCAAGTCAGTCTCATTGAGAGCTAAAGAAGATGATGATTGGTTTAAGAAGATGACTATGTTGAAAGTACCAGATTCTCATGAATTTGTTGTTACATCTTTAGATGTTGACAACGAGCATGGTGCCTGCGAGAAGCAGTGCCTAGGCAATTGTTCTTGCCTGGCTTATGCATTTGTAAATAAAATAGGGTGTTTGGTCTGGTCCAAAGAGCTTATTGACATACAGCAATTTTCGTTTGGCGGAGAAGATCTATATATTCGCCTAGCAGAAGCAGAACGAGATGAAGGTAAGCCAATAAAGTTAATTGCCACCCTTACAGCTATTTGTTCTATCACTATCCTGGGGGCCATTGTGTATGGTTGGCATAGGCTTGGAGCTGACCAAAAAGGAAAACATATGGAATTAACTGATACGATTCTTTCTTCAAGAGATGCTCTTCGAGAATATATAGGACAATCTGATCTATCAGAGCGATTGATCTATGATTTTGATACTATATCGACTGCTACAAACAATTTCAACACCACAAACAAACTCGGGCAAGGAGGCTTTGGTCCAGTTTATAAGGGTATGCTACCAGAAGGGAAGGAAATTGCTGTAAAAAGACTATCTAGCAGCTCAGGTCAAGGTATTCAAGAATTCAAGAATGAGATGTCGTTCATTTCCAATCTTCAGCACAAAAATCTTGTTAGGCTCTTGGGTTGCTGCATTAAAGATGAGGAGAAGTTACTGATTTATGAATTCATGGCAAACAAAAGCCTCGATACTTTGTTGCGCGATCAAACGAGAAAAAAAGTGCTTGATTGGGCTACACGCTTTAGCATTATCCAAGGTGTTGCTAGAGGGCTTCTTTATCTTCATCACGATTCCTGTTTGAAGGTGGTACATAGAGATTTGAAAGTCAGCAACATTCTCTTGGATGACAAAATGATCCCAAAAATTTCAGATTTTGGGTTGGCACGTATAATTGAAGCTACTCAGAATCTAGAAAATACTCGGAGAGTTGTGGGAACAATTGGTTATATGTCTCCAGAGTATGCCATGAGAGGGTTATTTTCCGAAAAATCTGATGTCTACAGCTTTGGAGTCTCGGTCTTGGAAATTATTAGCGGCAAGAAGAATAGTAGTTTCTTTATCCATGACCAACAGCTAGGCTTTCTATCCTATGTATGGCAATTATGGAACGAAGGCAGGGGGTTGGAGTTAGTAGATGAAGTATTGGGTGATTCATATTCACCATCACAGGTGATGAGATGCATTAATATTGGGCTTCTTTGTATACAAGACAATGCAGCAGATAGGCCAACTATGCATGATGTTGTTTTCATACTGAGTAGTGAGATAGATGCCTCTTCAACACCTAACCAGCCTGCTTACACTTTCCAAAACCCAGTCTCTCAATTTCAAGCACATGATGTTGATACTTGCTCTAGTAATGCTGAAGCGACCATAACAGTGATCGAAGGACGATAG

Protein Analysis

844

Amino Acids

94.11

Weight (kDa)

5.67

Isoelectric Point (pI)

36.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 83 - 189 7.8e-26 D-mannose binding lectin
S_locus_glycop PF00954 222 - 329 8.5e-29 S-locus glycoprotein domain
PAN_2 PF08276 365 - 428 1e-13 PAN-like domain
Pkinase PF00069 528 - 728 8.6e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 529 - 795 5.3e-49 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 105, 1626
AccB1I GGYRCC 2 cut(s) 385, 1184
AccB7I CCANNNNNTGG 3 cut(s) 127, 517, 587
AccI GTMKAC 2 cut(s) 2136, 2341
AccII CGCG 2 cut(s) 241, 1839
AciI CCGC 5 cut(s) 160, 239, 915, 1302, 2172
AclWI GGATC 4 cut(s) 572, 650, 658, 1987
AcoI YGGCCR 2 cut(s) 157, 258
AcsI RAATTY 5 cut(s) 751, 1145, 1700, 1802, 2001
AcuI CTGAAG 5 cut(s) 166, 801, 859, 1718, 2523
AfaI GTAC 6 cut(s) 234, 767, 793, 978, 1131, 1947
AfiI CCNNNNNNNGG 6 cut(s) 127, 517, 587, 666, 2109, 2232
AhlI ACTAGT 1 cut(s) 401
AjnI CCWGG 4 cut(s) 560, 1010, 1221, 1401
Alw21I GWGCWC 1 cut(s) 883
Alw26I GTCTC 7 cut(s) 154, 521, 611, 1078, 2094, 2155, 2461
Alw44I GTGCAC 1 cut(s) 879
AlwI GGATC 4 cut(s) 572, 650, 658, 1987
AlwNI CAGNNNCTG 1 cut(s) 517
Ama87I CYCGRG 1 cut(s) 1598
AoxI GGCC 5 cut(s) 157, 258, 674, 1407, 2363
ApaLI GTGCAC 1 cut(s) 879
ApeKI GCWGC 6 cut(s) 27, 315, 514, 1677, 1767, 2354
ApoI RAATTY 5 cut(s) 751, 1145, 1700, 1802, 2001
AseI ATTAAT 1 cut(s) 2322
AspA2I CCTAGG 1 cut(s) 1204
AspLEI GCGC 1 cut(s) 1839
AspS9I GGNCC 5 cut(s) 674, 917, 1263, 1407, 1616
AsuHPI GGTGA 3 cut(s) 2289, 2297, 2320
AsuII TTCGAA 1 cut(s) 168
AvaI CYCGRG 1 cut(s) 1598
AvaII GGWCC 3 cut(s) 917, 1263, 1616
AvrII CCTAGG 1 cut(s) 1204
BaeGI GKGCMC 1 cut(s) 883
BalI TGGCCA 1 cut(s) 260
BanI GGYRCC 2 cut(s) 385, 1184
BarI GAAGNNNNNNTAC 2 cut(s) 857, 889
Bbv12I GWGCWC 1 cut(s) 883
BbvI GCAGC 6 cut(s) 14, 327, 501, 1689, 1754, 2366
BccI CCATC 5 cut(s) 335, 397, 589, 631, 2308
BcgI CGANNNNNNTGC 2 cut(s) 1166, 1200
BciT130I CCWGG 4 cut(s) 562, 1012, 1223, 1403
BciVI GTATCC 1 cut(s) 876
BcoDI GTCTC 7 cut(s) 154, 521, 611, 1078, 2094, 2155, 2461
BcuI ACTAGT 1 cut(s) 401
BfaI CTAG 8 cut(s) 402, 1205, 1325, 1674, 1902, 2048, 2213, 2493
BfmI CTRYAG 1 cut(s) 2137
BfuI GTATCC 1 cut(s) 876
BglII AGATCT 1 cut(s) 1309
BisI GCNGC 8 cut(s) 28, 160, 316, 515, 1678, 1768, 2173, 2355
BlnI CCTAGG 1 cut(s) 1204
BlsI GCNGC 8 cut(s) 29, 161, 317, 516, 1679, 1769, 2174, 2356
BmcAI AGTACT 2 cut(s) 767, 793
Bme1390I CCNGG 4 cut(s) 562, 1012, 1223, 1403
Bme18I GGWCC 3 cut(s) 917, 1263, 1616
BmeT110I CYCGRG 1 cut(s) 1598
BmgT120I GGNCC 5 cut(s) 674, 917, 1263, 1407, 1616
BmiI GGNNCC 4 cut(s) 387, 1009, 1186, 1408
BmrFI CCNGG 4 cut(s) 562, 1012, 1223, 1403
BmrI ACTGGG 2 cut(s) 597, 2447
BmsI GCATC 4 cut(s) 425, 1483, 2306, 2398
BmuI ACTGGG 2 cut(s) 597, 2447
BoxI GACNNNNGTC 1 cut(s) 146
BpmI CTGGAG 2 cut(s) 350, 2076
Bpu10I CCTNAGC 1 cut(s) 1681
Bpu14I TTCGAA 1 cut(s) 168
Bsa29I ATCGAT 1 cut(s) 721
BsaAI YACGTR 1 cut(s) 2024
BsaI GGTCTC 1 cut(s) 521
BsaJI CCNNGG 4 cut(s) 677, 1204, 1402, 1891
BsaXI ACNNNNNCTCC 4 cut(s) 1011, 1041, 2139, 2169
Bsc4I CCNNNNNNNGG 6 cut(s) 127, 517, 587, 666, 2109, 2232
Bse1I ACTGG 4 cut(s) 592, 866, 1619, 2453
Bse3DI GCAATG 2 cut(s) 325, 411
BseBI CCWGG 4 cut(s) 562, 1012, 1223, 1403
BseCI ATCGAT 1 cut(s) 721
BseDI CCNNGG 4 cut(s) 677, 1204, 1402, 1891
BseGI GGATG 2 cut(s) 721, 1987
BseLI CCNNNNNNNGG 6 cut(s) 127, 517, 587, 666, 2109, 2232
BseMI GCAATG 2 cut(s) 325, 411
BseMII CTCAG 5 cut(s) 107, 606, 1695, 2054, 2384
BseNI ACTGG 4 cut(s) 592, 866, 1619, 2453
BseRI GAGGAG 3 cut(s) 142, 682, 1796
BseSI GKGCMC 1 cut(s) 883
BseXI GCAGC 6 cut(s) 14, 327, 501, 1689, 1754, 2366
BseYI CCCAGC 1 cut(s) 517
Bsh1236I CGCG 2 cut(s) 241, 1839
BshFI GGCC 5 cut(s) 159, 260, 676, 1409, 2365
BshNI GGYRCC 2 cut(s) 385, 1184
BshVI ATCGAT 1 cut(s) 721
BsiHKAI GWGCWC 1 cut(s) 883
BsiHKCI CYCGRG 1 cut(s) 1598
BslI CCNNNNNNNGG 6 cut(s) 127, 517, 587, 666, 2109, 2232
BsmAI GTCTC 7 cut(s) 154, 521, 611, 1078, 2094, 2155, 2461
BsnI GGCC 5 cut(s) 159, 260, 676, 1409, 2365
Bso31I GGTCTC 1 cut(s) 521
BsoBI CYCGRG 1 cut(s) 1598
Bsp119I TTCGAA 1 cut(s) 168
Bsp1286I GDGCHC 1 cut(s) 883
BspACI CCGC 5 cut(s) 160, 239, 915, 1302, 2172
BspANI GGCC 5 cut(s) 159, 260, 676, 1409, 2365
BspCNI CTCAG 5 cut(s) 106, 607, 1694, 2053, 2385
BspDI ATCGAT 1 cut(s) 721
BspFNI CGCG 2 cut(s) 241, 1839
BspHI TCATGA 2 cut(s) 552, 1141
BspLI GGNNCC 4 cut(s) 387, 1009, 1186, 1408
BspPI GGATC 4 cut(s) 572, 650, 658, 1987
BspQI GCTCTTC 1 cut(s) 1503
BspT104I TTCGAA 1 cut(s) 168
BspT107I GGYRCC 2 cut(s) 385, 1184
BspTNI GGTCTC 1 cut(s) 521
BsrDI GCAATG 2 cut(s) 325, 411
BsrI ACTGG 4 cut(s) 592, 866, 1619, 2453
BssECI CCNNGG 4 cut(s) 677, 1204, 1402, 1891
BssNAI GTATAC 1 cut(s) 2342
BssT1I CCWWGG 3 cut(s) 677, 1204, 1891
Bst1107I GTATAC 1 cut(s) 2342
Bst2UI CCWGG 4 cut(s) 562, 1012, 1223, 1403
Bst4CI ACNGT 3 cut(s) 455, 791, 2518
Bst6I CTCTTC 3 cut(s) 820, 1503, 2419
BstBAI YACGTR 1 cut(s) 2024
BstBI TTCGAA 1 cut(s) 168
BstC8I GCNNGC 3 cut(s) 913, 1189, 2433
BstDEI CTNAG 5 cut(s) 93, 615, 1681, 2040, 2393
BstENI CCTNNNNNAGG 1 cut(s) 664
BstF5I GGATG 2 cut(s) 721, 1987
BstFNI CGCG 2 cut(s) 241, 1839
BstHHI GCGC 1 cut(s) 1839
BstMAI GTCTC 7 cut(s) 154, 521, 611, 1078, 2094, 2155, 2461
BstMWI GCNNNNNNNGC 1 cut(s) 2371
BstNI CCWGG 4 cut(s) 562, 1012, 1223, 1403
BstNSI RCATGY 1 cut(s) 915
BstPAI GACNNNNGTC 1 cut(s) 146
BstSCI CCNGG 4 cut(s) 560, 1010, 1221, 1401
BstSFI CTRYAG 1 cut(s) 2137
BstSLI GKGCMC 1 cut(s) 883
BstUI CGCG 2 cut(s) 241, 1839
BstV1I GCAGC 6 cut(s) 14, 327, 501, 1689, 1754, 2366
BstX2I RGATCY 1 cut(s) 1309
BstYI RGATCY 1 cut(s) 1309
BstZ17I GTATAC 1 cut(s) 2342
Bsu15I ATCGAT 1 cut(s) 721
BsuI GTATCC 1 cut(s) 876
BsuRI GGCC 5 cut(s) 159, 260, 676, 1409, 2365
BsuTUI ATCGAT 1 cut(s) 721
BtsCI GGATG 2 cut(s) 721, 1987
BtsI GCAGTG 1 cut(s) 1205
BtsIMutI CAGTG 4 cut(s) 460, 883, 1205, 2523
Cac8I GCNNGC 3 cut(s) 913, 1189, 2433
CaiI CAGNNNCTG 1 cut(s) 517
CciI TCATGA 2 cut(s) 552, 1141
CfoI GCGC 1 cut(s) 1839
Cfr13I GGNCC 5 cut(s) 674, 917, 1263, 1407, 1616
ClaI ATCGAT 1 cut(s) 721
Csp6I GTAC 6 cut(s) 233, 766, 792, 977, 1130, 1946
CviQI GTAC 6 cut(s) 233, 766, 792, 977, 1130, 1946
DdeI CTNAG 5 cut(s) 93, 615, 1681, 2040, 2393
EaeI YGGCCR 2 cut(s) 157, 258
Eam1104I CTCTTC 3 cut(s) 820, 1503, 2419
EarI CTCTTC 3 cut(s) 820, 1503, 2419
EciI GGCGGA 1 cut(s) 1317
Eco130I CCWWGG 3 cut(s) 677, 1204, 1891
Eco31I GGTCTC 1 cut(s) 521
Eco32I GATATC 1 cut(s) 354
Eco47I GGWCC 3 cut(s) 917, 1263, 1616
Eco57I CTGAAG 5 cut(s) 166, 801, 859, 1718, 2523
Eco88I CYCGRG 1 cut(s) 1598
EcoNI CCTNNNNNAGG 1 cut(s) 664
EcoRI GAATTC 2 cut(s) 1700, 1802
EcoRII CCWGG 4 cut(s) 560, 1010, 1221, 1401
EcoRV GATATC 1 cut(s) 354
EcoT14I CCWWGG 3 cut(s) 677, 1204, 1891
EcoT22I ATGCAT 3 cut(s) 1234, 2321, 2376
ErhI CCWWGG 3 cut(s) 677, 1204, 1891
FauNDI CATATG 1 cut(s) 1458
FblI GTMKAC 2 cut(s) 2136, 2341
Fnu4HI GCNGC 8 cut(s) 28, 160, 316, 515, 1678, 1768, 2173, 2355
FokI GGATG 2 cut(s) 728, 1994
Fsp4HI GCNGC 8 cut(s) 28, 160, 316, 515, 1678, 1768, 2173, 2355
FspBI CTAG 8 cut(s) 402, 1205, 1325, 1674, 1902, 2048, 2213, 2493
GlaI GCGC 1 cut(s) 1838
GluI GCNGC 8 cut(s) 28, 160, 316, 515, 1678, 1768, 2173, 2355
GsaI CCCAGC 1 cut(s) 521
GsuI CTGGAG 2 cut(s) 350, 2076
HaeIII GGCC 5 cut(s) 159, 260, 676, 1409, 2365
HhaI GCGC 1 cut(s) 1839
Hin6I GCGC 1 cut(s) 1837
HinP1I GCGC 1 cut(s) 1837
HincII GTYRAC 2 cut(s) 366, 1171
HindII GTYRAC 2 cut(s) 366, 1171
HindIII AAGCTT 2 cut(s) 833, 936
HphI GGTGA 3 cut(s) 2289, 2297, 2320
Hpy166II GTNNAC 5 cut(s) 366, 881, 1171, 2137, 2342
Hpy8I GTNNAC 5 cut(s) 366, 881, 1171, 2137, 2342
HpyAV CCTTC 8 cut(s) 126, 815, 1340, 1637, 1642, 1933, 2243, 2519
HpyCH4III ACNGT 3 cut(s) 455, 791, 2518
HpyCH4IV ACGT 1 cut(s) 2023
HpyF10VI GCNNNNNNNGC 1 cut(s) 2371
HpyF3I CTNAG 5 cut(s) 93, 615, 1681, 2040, 2393
HpySE526I ACGT 1 cut(s) 2023
HspAI GCGC 1 cut(s) 1837
LguI GCTCTTC 1 cut(s) 1503
LmnI GCTCC 4 cut(s) 331, 908, 999, 1436
Lsp1109I GCAGC 6 cut(s) 14, 327, 501, 1689, 1754, 2366
LweI GCATC 4 cut(s) 425, 1483, 2306, 2398
MaeI CTAG 8 cut(s) 402, 1205, 1325, 1674, 1902, 2048, 2213, 2493
MaeII ACGT 1 cut(s) 2023
MaeIII GTNAC 3 cut(s) 1055, 1153, 1788
MfeI CAATTG 3 cut(s) 464, 1210, 2076
MflI RGATCY 1 cut(s) 1309
MhlI GDGCHC 1 cut(s) 883
MlsI TGGCCA 1 cut(s) 260
MluNI TGGCCA 1 cut(s) 260
MlyI GAGTC 2 cut(s) 136, 2157
MmeI TCCRAC 2 cut(s) 583, 2241
Mox20I TGGCCA 1 cut(s) 260
Mph1103I ATGCAT 3 cut(s) 1234, 2321, 2376
MscI TGGCCA 1 cut(s) 260
MseI TTAA 9 cut(s) 32, 62, 744, 755, 1107, 1364, 1466, 1773, 2322
MslI CAYNNNNRTG 1 cut(s) 2516
Msp20I TGGCCA 1 cut(s) 260
MspA1I CMGCKG 1 cut(s) 514
MspR9I CCNGG 4 cut(s) 562, 1012, 1223, 1403
MunI CAATTG 3 cut(s) 464, 1210, 2076
MvaI CCWGG 4 cut(s) 562, 1012, 1223, 1403
MvnI CGCG 2 cut(s) 241, 1839
MwoI GCNNNNNNNGC 1 cut(s) 2371
NdeI CATATG 1 cut(s) 1458
NlaIV GGNNCC 4 cut(s) 387, 1009, 1186, 1408
NmuCI GTSAC 1 cut(s) 1055
NsiI ATGCAT 3 cut(s) 1234, 2321, 2376
NspI RCATGY 1 cut(s) 915
NspV TTCGAA 1 cut(s) 168
PaeI GCATGC 1 cut(s) 915
PagI TCATGA 2 cut(s) 552, 1141
PciSI GCTCTTC 1 cut(s) 1503
PfeI GAWTC 8 cut(s) 11, 325, 944, 1136, 1477, 1928, 2044, 2288
PflMI CCANNNNNTGG 3 cut(s) 127, 517, 587
PfoI TCCNGGA 1 cut(s) 560
PkrI GCNGC 8 cut(s) 29, 161, 317, 516, 1679, 1769, 2174, 2356
PleI GAGTC 2 cut(s) 136, 2156
PpsI GAGTC 2 cut(s) 136, 2156
Ppu21I YACGTR 1 cut(s) 2024
PshAI GACNNNNGTC 1 cut(s) 146
PshBI ATTAAT 1 cut(s) 2322
PsiI TTATAA 2 cut(s) 105, 1626
Psp6I CCWGG 4 cut(s) 560, 1010, 1221, 1401
PspFI CCCAGC 1 cut(s) 517
PspGI CCWGG 4 cut(s) 560, 1010, 1221, 1401
PspN4I GGNNCC 4 cut(s) 387, 1009, 1186, 1408
PspPI GGNCC 5 cut(s) 674, 917, 1263, 1407, 1616
PstNI CAGNNNCTG 1 cut(s) 517
PsuI RGATCY 1 cut(s) 1309
PvuII CAGCTG 1 cut(s) 514
RsaI GTAC 6 cut(s) 234, 767, 793, 978, 1131, 1947
RsaNI GTAC 6 cut(s) 233, 766, 792, 977, 1130, 1946
RseI CAYNNNNRTG 1 cut(s) 2516
SapI GCTCTTC 1 cut(s) 1503
SaqAI TTAA 9 cut(s) 32, 62, 744, 755, 1107, 1364, 1466, 1773, 2322
SatI GCNGC 8 cut(s) 28, 160, 316, 515, 1678, 1768, 2173, 2355
Sau96I GGNCC 5 cut(s) 674, 917, 1263, 1407, 1616
ScaI AGTACT 2 cut(s) 767, 793
SchI GAGTC 2 cut(s) 136, 2157
ScrFI CCNGG 4 cut(s) 562, 1012, 1223, 1403
SduI GDGCHC 1 cut(s) 883
SfaNI GCATC 4 cut(s) 425, 1483, 2306, 2398
SfcI CTRYAG 1 cut(s) 2137
SfuI TTCGAA 1 cut(s) 168
SinI GGWCC 3 cut(s) 917, 1263, 1616
SmiMI CAYNNNNRTG 1 cut(s) 2516
SpeI ACTAGT 1 cut(s) 401
SphI GCATGC 1 cut(s) 915
SsiI CCGC 5 cut(s) 160, 239, 915, 1302, 2172
SspI AATATT 1 cut(s) 2326
SspMI CTAG 8 cut(s) 402, 1205, 1325, 1674, 1902, 2048, 2213, 2493
StyD4I CCNGG 4 cut(s) 560, 1010, 1221, 1401
StyI CCWWGG 3 cut(s) 677, 1204, 1891
TaaI ACNGT 3 cut(s) 455, 791, 2518
TaiI ACGT 1 cut(s) 2026
TaqI TCGA 7 cut(s) 168, 447, 721, 1501, 1562, 1824, 2523
TaqII GACCGA 1 cut(s) 2143
TatI WGTACW 3 cut(s) 232, 765, 791
TauI GCSGC 2 cut(s) 162, 2175
TfiI GAWTC 8 cut(s) 11, 325, 944, 1136, 1477, 1928, 2044, 2288
Tru1I TTAA 9 cut(s) 32, 62, 744, 755, 1107, 1364, 1466, 1773, 2322
Tru9I TTAA 9 cut(s) 32, 62, 744, 755, 1107, 1364, 1466, 1773, 2322
TscAI CASTG 4 cut(s) 460, 883, 1205, 2523
TseFI GTSAC 1 cut(s) 1055
TseI GCWGC 6 cut(s) 27, 315, 514, 1677, 1767, 2354
Tsp45I GTSAC 1 cut(s) 1055
TspRI CASTG 4 cut(s) 460, 883, 1205, 2523
Van91I CCANNNNNTGG 3 cut(s) 127, 517, 587
VneI GTGCAC 1 cut(s) 879
VpaK11BI GGWCC 3 cut(s) 917, 1263, 1616
VspI ATTAAT 1 cut(s) 2322
XagI CCTNNNNNAGG 1 cut(s) 664
XapI RAATTY 5 cut(s) 751, 1145, 1700, 1802, 2001
XbaI TCTAGA 1 cut(s) 2047
XceI RCATGY 1 cut(s) 915
XmaJI CCTAGG 1 cut(s) 1204
XmiI GTMKAC 2 cut(s) 2136, 2341
XspI CTAG 8 cut(s) 402, 1205, 1325, 1674, 1902, 2048, 2213, 2493
ZrmI AGTACT 2 cut(s) 767, 793
Zsp2I ATGCAT 3 cut(s) 1234, 2321, 2376
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.