Rorug01G0215700

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Forward (+)
30787368 .. 30791075
3708 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0215700.1

Sequence Viewer

Length: 3471 bp
ATGGGTTCTCCTTCCGGATTTACTTATGACGTTTTCTTGAGCTTCCGAGGTGAAGACACTCGAAAGAACTTCACTGATCACCTCTACACAGCCCTTGCCAACGCCCGATTTCAAGCTTTCCGAGATGACCCTGAACTCAAGAAAGGGAAAAATATCAAGGAAGAGCTTGAGAAAGCCATTCGAGAGTCACGAAGTTCTGTGATTGTGTTTTCGAAAGACTACGCCTCTTCCAAATGGTGCCTCGACGAGCTTGTCATGATCCTTGAACGCAAGAGGACCTCCAATCATTTCGTTTTACCAGTCTTCTACCACGTTGATCCATCCCATCTGAGGAAGCAGACTGCAAGTGTTGCAAAAGCATTTACTAGACACCAGAGAACTCAATTGTCGAGTAAAGTGAGAAGATGGCGGGCAGCACTTAAAGAAGTTGCAGATCTAGCTGGAATGAATTTACAAAATGAAGCTGACGGGCACGAGTCAAAGTTCATCCAAAAGATTGTTACAGTGATTCAAGACAAGCTAGGCGGTGTGCCCCTGACCGATGTCCAGGAGGTGTTACAGAAGAAGTTGTTGTTTATTAAGCCTCACCTCGATGACGCGGAGGGGAAGCAACTGAACAGCTCTACTGTGAAGGCATGGCTCAATGAGCTTAAAGAAGCTGTCTATGATACGGAGGACCTATTGCAGGAGATCAAGACAGAATCATTGAGACGAAAGATGGAACCCGAATCTGGAAGTAGCACAAGTGAGGTACATGACCTCAACTTCAGTCTTCCATCTCATCCTTTTGACTCAACATTAATTTACCTCAGGGTAGAGGAAGTTCTTAATAGACTGGATTCCATTATGGAGAAGAGAAAAGATGTCTTGGGTATGGAAGCAAGTGCCACAAGAGATGAAGAGAAAGAAACATTGGTTAAAATATTGCTATCAGATGATGAGACTGGCAATGAAATAGGTGTGATTCCTATTGTGGGTATGGGTGGGACTGGAAAGACCACCCTTGCCCAGTTTGTATACAACGATGTTAGAGTGAAGCAACATTTTCACCTCCAAGCATGGGTTTACGTTTCAAAAGAATTTGATGTTTTTAGGATCTCACAACACATTTATGAGTCCCTCACCTCAGAAGCTTGCCAAAGCACAAACCTAGATCTGCTTCTATCAAAGTTGCAGGAAACTTTGAGGGGGAAAAGGTTCTTCTTTGTTCTTGATGACATCTGGAACAAGAATTATAACCAGTTGGAATTATTAATGCGTCCCCTTGAGTCTGGAGCACATGGAAGCAAGATTATTGTCACAACACGTGATGAAGATGTTACACGTATGATGGGTAGCCTTGAAGCTCACCGTCTCATGCCAATTTCTGAGCAAGATAGCTGGTTGTTATTCGAAAAGCATGCCTTCAAAAATGCAGGTGTTAGTGCACGCTCACATCTTGAAGAAATCGGTAGACAAATTGTTCAAAAGTGCAAGGGTCTTCCTTTGGCTATTAAGTCCCTTGCAGGTCTCCTATGTTCTAAATCAAATGTGGATGAATGGGAAACTATATTGAACAGTGACCTCTGGGAGTTGCCTTTGGAGAGTGACGTTCTGCCATCACTTTGGTTGAGCTATATGTACCTGCCTTCACAACTCAAACATTGTTTTGCATATTGTTCGATATTTCCCAAGAACTATGTGTTCAAAACATCAGAATTGGTTTACTTGTGGATGGCCAAAGATCTATTGCAACCTAAAAACCCCAAAACTGCAGAAGAAACCGGACAAGATTACTTCAATGATCTAGTCTCAATGTCATTTTTTCAAGTTTTATCAAGTTCAGATCAATATTTCATGCATGACCTTATCAATGATTTAGCAAGCTTTGTATCAGGAGAATTTTGTTTTAGGTGGGAGGGCAGTGATTCAACCAACAATTTGAGCAACACTCGTCACTTTTCATATATGCCAGTATATCATGATGAGGCTGATAGCCTAGAGATGTTTGAGGCTTTACAGCAAGCTAAATGTTTGCACACATTTCTACCATTAGGACCATCTTATTTTCTGTGGAAGTTGTCAGACAAAGGACTCTACGAGGCATTGCCAAAGTTTCAATGTTTAAGAATGCTCAAGTTACCATTGTACGATATTAAGGAATTGCCTGATTCAATTAACAACTTGAAACATCTTAAGCACTTTGACTTGTCTTACAGTAACATCGAGAAATTACCTGATACAATTTGTACTTTGTATAACTTGCAAGTATTGTTGTTGTCAAACTGTGAAGGCCTTACTGAACTGCCAGCCAACTTAGGAAGATTGATCAACTTGAGCCATCTGGATATTAAAGGTACAAACTTGAAAAAGATGCCACCGTATATGGGTAAGTTGAAAGACCTCCAGATGCTAACAGAGTTTGTGGTAGACAAACACCCTGCTGGGGATAATTTGGCAGAGTTAAAGAAGCTTGAAAAATTGCGTGGGAGATTTTGTATCTCAGGGCTTGTGCATAGCAGCGGTTTGGAGGCCTACATACTGAGGGACAAGAAGTTTCTTAAGGAACTGGTTTTGGATTGGGGACGAAGGTATTTGGGAGTACCATGGTATCGGAGAGGAAGGGATTGGAGTGAAGAAGGCAATAATACTGTAGAAGATAGAGAAGTGCTTGAGAAGCTCCAACCTCACCTGAACCTGGAAAGGCTTACAATTAGAAGTTATGGAGGCAAATTGTTTCCGGGTTGGTCAGAATATTCCTCTGCTCTTGTTTATCTTAAACTTGAAAATTGTGAGAATTGTATCTCCTTGCCACCATTGGGACAGTTACCTTCCCTCACAGAGCTTTGTATATCTGGGTTGAGTGGGTGGCAAGAATGGTCTGATGTTGGAGGTGACGATATTGAAGGTGGGGTTTTTCCTAATCTTGTTCAACTTGAAGTATTATGGTGTCCCAATCTTACCGGGAGATTAGCGTCAGACAGTCTCCCATCTCTTGTGTCTTTGAGGGTATTTAAGTGCCCAGAATTCGAATGTTTTCCGGAAGATGGATTCCCATCAAAGTTAAAATCACTTGAAATCTTCGACTATAAAAAAGTGAATGCAAAGAGTATGCAGAATCTGAACAAGGGTCTCCGAACACTCACCTCTCTTGAAAGATTGTCACTTGATTTTGACTGCGACGAAAAAGTAGATTGGTTTGCCGAGGAGGAGCAGGAGGAGCTGTTTCCCAGCACTCTCACATCTCTCGAGATCTGCCGTCTGAATTGCGAGACCATCGACGGCGCCAAGTGGTTTGGCCATCTCAACTCTCTTGAAGAATTGATTATATGGAATTGCCCTGCGCTCCGGTGCTTGCCAGATAGTGGACTACCCTCTCCTCTTTCTGATCTACATATCGTTCAATGTCCTTTGCTTGAGAAACGGTGCCAAAGAGAGACGGGTGAAGATTGGCCCAAGATTGCTCACATCAAGGGCATATCAATTTGGTAA

Protein Analysis

1156

Amino Acids

132.46

Weight (kDa)

5.61

Isoelectric Point (pI)

45.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 9 - 180 4.2e-50 TIR domain
TIR_2 PF13676 11 - 110 5.1e-17 TIR domain
Rx_N PF18052 163 - 245 9e-15 Rx N-terminal domain
NB-ARC PF00931 300 - 471 3.8e-38 NB-ARC domain
WHD_DRP PF23559 555 - 621 1.9e-22 Disease resistance protein Winged helix domain
LRR_14 PF23598 694 - 997 1.5e-23 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 812 - 946 1.8e-28 R13L1/DRL21 LRRs
LRR_R13L1-DRL21 PF25019 1016 - 1129 2e-06 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1236
AarI CACCTGC 1 cut(s) 1406
AasI GACNNNNNNGTC 1 cut(s) 251
Acc36I ACCTGC 3 cut(s) 1406, 1496, 1632
AccB1I GGYRCC 3 cut(s) 237, 3263, 3405
AccB7I CCANNNNNTGG 1 cut(s) 3344
AccI GTMKAC 3 cut(s) 1017, 1453, 2409
AccII CGCG 1 cut(s) 599
AccIII TCCGGA 2 cut(s) 14, 3019
AciI CCGC 4 cut(s) 409, 525, 599, 2502
AclWI GGATC 3 cut(s) 253, 311, 1103
AcoI YGGCCR 2 cut(s) 1716, 3277
AcsI RAATTY 4 cut(s) 448, 1079, 1880, 3005
AcuI CTGAAG 1 cut(s) 751
AcvI CACGTG 1 cut(s) 1307
AcyI GRCGYC 1 cut(s) 3264
AfaI GTAC 6 cut(s) 753, 1622, 2129, 2230, 2338, 2583
AflII CTTAAG 2 cut(s) 2174, 2540
AflIII ACRYGT 2 cut(s) 1304, 1322
AjnI CCWGG 2 cut(s) 546, 2676
AjuI GAANNNNNNNTTGG 2 cut(s) 896, 928
Alw21I GWGCWC 2 cut(s) 1279, 1429
Alw26I GTCTC 9 cut(s) 703, 935, 1358, 1514, 1795, 2969, 3116, 3245, 3410
Alw44I GTGCAC 1 cut(s) 1425
AlwI GGATC 3 cut(s) 253, 311, 1103
AlwNI CAGNNNCTG 1 cut(s) 3100
Ama87I CYCGRG 1 cut(s) 3227
Aor13HI TCCGGA 2 cut(s) 14, 3019
AoxI GGCC 5 cut(s) 1716, 2272, 2511, 3277, 3431
ApaLI GTGCAC 1 cut(s) 1425
ApeKI GCWGC 2 cut(s) 413, 2499
ApoI RAATTY 4 cut(s) 448, 1079, 1880, 3005
AseI ATTAAT 2 cut(s) 800, 1253
Asp700I GAANNNNTTC 2 cut(s) 1196, 3015
AspLEI GCGC 2 cut(s) 3266, 3325
AspS9I GGNCC 4 cut(s) 276, 676, 2036, 3432
AsuC2I CCSGG 2 cut(s) 2721, 2944
AsuII TTCGAA 3 cut(s) 212, 1392, 3009
AvaI CYCGRG 1 cut(s) 3227
AvaII GGWCC 3 cut(s) 276, 676, 2036
AxyI CCTNAGG 1 cut(s) 809
BaeGI GKGCMC 4 cut(s) 474, 534, 1429, 3002
BaeI ACNNNNGTAYC 2 cut(s) 2573, 2606
BalI TGGCCA 2 cut(s) 1718, 3279
BanI GGYRCC 3 cut(s) 237, 3263, 3405
BauI CACGAG 1 cut(s) 473
BbrPI CACGTG 1 cut(s) 1307
BbsI GAAGAC 4 cut(s) 60, 295, 764, 1472
Bbv12I GWGCWC 2 cut(s) 1279, 1429
BbvI GCAGC 2 cut(s) 425, 2511
BceAI ACGGC 2 cut(s) 3222, 3277
BcgI CGANNNNNNTGC 4 cut(s) 1382, 1416, 1641, 1675
BciT130I CCWGG 2 cut(s) 548, 2678
BclI TGATCA 2 cut(s) 76, 2307
BcnI CCSGG 2 cut(s) 2721, 2944
BcoDI GTCTC 9 cut(s) 703, 935, 1358, 1514, 1795, 2969, 3116, 3245, 3410
BfaI CTAG 6 cut(s) 366, 437, 521, 1151, 1787, 1979
BfmI CTRYAG 2 cut(s) 1752, 2631
BfoI RGCGCY 1 cut(s) 3267
BfrI CTTAAG 2 cut(s) 2174, 2540
BfuAI ACCTGC 3 cut(s) 1406, 1496, 1632
BglII AGATCT 4 cut(s) 433, 1153, 1723, 3231
BisI GCNGC 2 cut(s) 414, 2500
BlsI GCNGC 2 cut(s) 415, 2501
Bme1390I CCNGG 4 cut(s) 548, 2678, 2721, 2944
Bme18I GGWCC 3 cut(s) 276, 676, 2036
BmeT110I CYCGRG 1 cut(s) 3227
BmgT120I GGNCC 4 cut(s) 276, 676, 2036, 3432
BmiI GGNNCC 4 cut(s) 239, 723, 3265, 3407
BmrFI CCNGG 4 cut(s) 548, 2678, 2721, 2944
BmrI ACTGGG 1 cut(s) 1003
BmsI GCATC 2 cut(s) 2343, 2379
BmuI ACTGGG 1 cut(s) 1003
BoxI GACNNNNGTC 1 cut(s) 542
BpiI GAAGAC 4 cut(s) 60, 295, 764, 1472
BplI GAGNNNNNCTC 2 cut(s) 1915, 1947
BpmI CTGGAG 2 cut(s) 1293, 2369
Bpu14I TTCGAA 3 cut(s) 212, 1392, 3009
BpuEI CTTGAG 8 cut(s) 58, 122, 188, 1286, 2099, 2335, 2672, 3416
BpuMI CCSGG 2 cut(s) 2721, 2944
BsaAI YACGTR 2 cut(s) 1307, 1325
BsaBI GATNNNNATC 1 cut(s) 3034
BsaHI GRCGYC 1 cut(s) 3264
BsaI GGTCTC 3 cut(s) 1514, 3116, 3245
BsaJI CCNNGG 3 cut(s) 46, 2585, 3183
BsaWI WCCGGW 4 cut(s) 14, 1763, 3019, 3327
BsaXI ACNNNNNCTCC 4 cut(s) 2461, 2491, 3188, 3218
Bse1I ACTGG 8 cut(s) 299, 840, 949, 994, 1009, 1240, 1952, 2553
Bse21I CCTNAGG 1 cut(s) 809
Bse3DI GCAATG 2 cut(s) 955, 2084
Bse8I GATNNNNATC 1 cut(s) 3034
BseAI TCCGGA 2 cut(s) 14, 3019
BseBI CCWGG 2 cut(s) 548, 2678
BseDI CCNNGG 3 cut(s) 46, 2585, 3183
BseGI GGATG 5 cut(s) 320, 486, 781, 1540, 1719
BseJI GATNNNNATC 1 cut(s) 3034
BseMI GCAATG 2 cut(s) 955, 2084
BseMII CTCAG 6 cut(s) 320, 823, 1140, 1359, 2496, 2513
BseNI ACTGG 8 cut(s) 299, 840, 949, 994, 1009, 1240, 1952, 2553
BseRI GAGGAG 4 cut(s) 3200, 3203, 3212, 3348
BseSI GKGCMC 4 cut(s) 474, 534, 1429, 3002
BseXI GCAGC 2 cut(s) 425, 2511
BseYI CCCAGC 2 cut(s) 2423, 3209
Bsh1236I CGCG 1 cut(s) 599
BshFI GGCC 5 cut(s) 1718, 2274, 2513, 3279, 3433
BshNI GGYRCC 3 cut(s) 237, 3263, 3405
BsiHKAI GWGCWC 2 cut(s) 1279, 1429
BsiHKCI CYCGRG 1 cut(s) 3227
BsiSI CCGG 6 cut(s) 15, 1764, 2720, 2943, 3020, 3328
BslFI GGGAC 8 cut(s) 1000, 1102, 1245, 1483, 2540, 2577, 2814, 2916
BsmAI GTCTC 9 cut(s) 703, 935, 1358, 1514, 1795, 2969, 3116, 3245, 3410
BsmBI CGTCTC 3 cut(s) 703, 1358, 3410
BsmFI GGGAC 8 cut(s) 1000, 1102, 1245, 1483, 2540, 2577, 2814, 2916
BsmI GAATGC 2 cut(s) 2115, 3085
BsnI GGCC 5 cut(s) 1718, 2274, 2513, 3279, 3433
Bso31I GGTCTC 3 cut(s) 1514, 3116, 3245
BsoBI CYCGRG 1 cut(s) 3227
Bsp119I TTCGAA 3 cut(s) 212, 1392, 3009
Bsp1286I GDGCHC 5 cut(s) 474, 534, 1279, 1429, 3002
Bsp13I TCCGGA 2 cut(s) 14, 3019
Bsp19I CCATGG 1 cut(s) 2585
BspACI CCGC 4 cut(s) 409, 525, 599, 2502
BspANI GGCC 5 cut(s) 1718, 2274, 2513, 3279, 3433
BspCNI CTCAG 6 cut(s) 321, 822, 1139, 1360, 2495, 2514
BspEI TCCGGA 2 cut(s) 14, 3019
BspFNI CGCG 1 cut(s) 599
BspHI TCATGA 2 cut(s) 255, 1960
BspLI GGNNCC 4 cut(s) 239, 723, 3265, 3407
BspMAI CTGCAG 1 cut(s) 1756
BspMI ACCTGC 3 cut(s) 1406, 1496, 1632
BspPI GGATC 3 cut(s) 253, 311, 1103
BspQI GCTCTTC 1 cut(s) 156
BspT104I TTCGAA 3 cut(s) 212, 1392, 3009
BspT107I GGYRCC 3 cut(s) 237, 3263, 3405
BspTI CTTAAG 2 cut(s) 2174, 2540
BspTNI GGTCTC 3 cut(s) 1514, 3116, 3245
BsrDI GCAATG 2 cut(s) 955, 2084
BsrI ACTGG 8 cut(s) 299, 840, 949, 994, 1009, 1240, 1952, 2553
BssECI CCNNGG 3 cut(s) 46, 2585, 3183
BssNAI GTATAC 1 cut(s) 1018
BssNI GRCGYC 1 cut(s) 3264
BssSI CACGAG 1 cut(s) 473
BssT1I CCWWGG 1 cut(s) 2585
Bst1107I GTATAC 1 cut(s) 1018
Bst2BI CACGAG 1 cut(s) 473
Bst2UI CCWGG 2 cut(s) 548, 2678
Bst6I CTCTTC 4 cut(s) 156, 232, 848, 894
BstACI GRCGYC 1 cut(s) 3264
BstAFI CTTAAG 2 cut(s) 2174, 2540
BstAPI GCANNNNNTGC 1 cut(s) 350
BstBAI YACGTR 2 cut(s) 1307, 1325
BstBI TTCGAA 3 cut(s) 212, 1392, 3009
BstC8I GCNNGC 8 cut(s) 411, 1135, 1401, 1429, 1864, 2004, 2289, 3335
BstDEI CTNAG 7 cut(s) 329, 809, 1126, 1368, 2296, 2482, 2522
BstDSI CCRYGG 1 cut(s) 2585
BstENI CCTNNNNNAGG 1 cut(s) 683
BstF5I GGATG 5 cut(s) 320, 486, 781, 1540, 1719
BstFNI CGCG 1 cut(s) 599
BstH2I RGCGCY 1 cut(s) 3267
BstHHI GCGC 2 cut(s) 3266, 3325
BstMAI GTCTC 9 cut(s) 703, 935, 1358, 1514, 1795, 2969, 3116, 3245, 3410
BstMWI GCNNNNNNNGC 5 cut(s) 350, 437, 646, 2656, 3199
BstNI CCWGG 2 cut(s) 548, 2678
BstNSI RCATGY 1 cut(s) 1403
BstPAI GACNNNNGTC 1 cut(s) 542
BstSCI CCNGG 4 cut(s) 546, 2676, 2719, 2942
BstSFI CTRYAG 2 cut(s) 1752, 2631
BstSLI GKGCMC 4 cut(s) 474, 534, 1429, 3002
BstUI CGCG 1 cut(s) 599
BstV1I GCAGC 2 cut(s) 425, 2511
BstV2I GAAGAC 4 cut(s) 60, 295, 764, 1472
BstX2I RGATCY 5 cut(s) 433, 1095, 1153, 1723, 3231
BstXI CCANNNNNNTGG 1 cut(s) 1605
BstYI RGATCY 5 cut(s) 433, 1095, 1153, 1723, 3231
BstZ17I GTATAC 1 cut(s) 1018
Bsu36I CCTNAGG 1 cut(s) 809
BsuRI GGCC 5 cut(s) 1718, 2274, 2513, 3279, 3433
BtgI CCRYGG 1 cut(s) 2585
BtsCI GGATG 5 cut(s) 320, 486, 781, 1540, 1719
BtsI GCAGTG 1 cut(s) 1909
BtsIMutI CAGTG 4 cut(s) 72, 510, 1564, 1909
BveI ACCTGC 3 cut(s) 1406, 1496, 1632
Cac8I GCNNGC 8 cut(s) 411, 1135, 1401, 1429, 1864, 2004, 2289, 3335
CaiI CAGNNNCTG 1 cut(s) 3100
CciI TCATGA 2 cut(s) 255, 1960
CfoI GCGC 2 cut(s) 3266, 3325
Cfr13I GGNCC 4 cut(s) 276, 676, 2036, 3432
CseI GACGC 3 cut(s) 605, 1247, 2943
Csp6I GTAC 6 cut(s) 752, 1621, 2128, 2229, 2337, 2582
CviQI GTAC 6 cut(s) 752, 1621, 2128, 2229, 2337, 2582
DdeI CTNAG 7 cut(s) 329, 809, 1126, 1368, 2296, 2482, 2522
DinI GGCGCC 1 cut(s) 3265
DrdI GACNNNNNNGTC 1 cut(s) 251
DseDI GACNNNNNNGTC 1 cut(s) 251
EaeI YGGCCR 2 cut(s) 1716, 3277
Eam1104I CTCTTC 4 cut(s) 156, 232, 848, 894
EarI CTCTTC 4 cut(s) 156, 232, 848, 894
Eco130I CCWWGG 1 cut(s) 2585
Eco147I AGGCCT 2 cut(s) 2274, 2513
Eco31I GGTCTC 3 cut(s) 1514, 3116, 3245
Eco47I GGWCC 3 cut(s) 276, 676, 2036
Eco57I CTGAAG 1 cut(s) 751
Eco72I CACGTG 1 cut(s) 1307
Eco81I CCTNAGG 1 cut(s) 809
Eco88I CYCGRG 1 cut(s) 3227
EcoNI CCTNNNNNAGG 1 cut(s) 683
EcoO109I RGGNCCY 2 cut(s) 276, 676
EcoRI GAATTC 1 cut(s) 3005
EcoRII CCWGG 2 cut(s) 546, 2676
EcoT14I CCWWGG 1 cut(s) 2585
EcoT22I ATGCAT 1 cut(s) 1842
EgeI GGCGCC 1 cut(s) 3265
EheI GGCGCC 1 cut(s) 3265
ErhI CCWWGG 1 cut(s) 2585
Esp3I CGTCTC 3 cut(s) 703, 1358, 3410
FalI AAGNNNNNCTT 2 cut(s) 1388, 1420
FaqI GGGAC 8 cut(s) 1000, 1102, 1245, 1483, 2540, 2577, 2814, 2916
FauI CCCGC 1 cut(s) 402
FbaI TGATCA 2 cut(s) 76, 2307
FblI GTMKAC 3 cut(s) 1017, 1453, 2409
Fnu4HI GCNGC 2 cut(s) 414, 2500
FokI GGATG 5 cut(s) 307, 473, 768, 1547, 1726
Fsp4HI GCNGC 2 cut(s) 414, 2500
FspBI CTAG 6 cut(s) 366, 437, 521, 1151, 1787, 1979
GlaI GCGC 2 cut(s) 3265, 3324
GluI GCNGC 2 cut(s) 414, 2500
GsaI CCCAGC 2 cut(s) 2427, 3213
GsuI CTGGAG 2 cut(s) 1293, 2369
HaeII RGCGCY 1 cut(s) 3267
HaeIII GGCC 5 cut(s) 1718, 2274, 2513, 3279, 3433
HapII CCGG 6 cut(s) 15, 1764, 2720, 2943, 3020, 3328
HgaI GACGC 3 cut(s) 605, 1247, 2943
HhaI GCGC 2 cut(s) 3266, 3325
Hin1I GRCGYC 1 cut(s) 3264
Hin6I GCGC 2 cut(s) 3264, 3323
HinP1I GCGC 2 cut(s) 3264, 3323
HindIII AAGCTT 4 cut(s) 114, 1131, 1864, 2450
HpaII CCGG 6 cut(s) 15, 1764, 2720, 2943, 3020, 3328
Hpy166II GTNNAC 7 cut(s) 1018, 1066, 1427, 1454, 1705, 2410, 3347
Hpy8I GTNNAC 7 cut(s) 1018, 1066, 1427, 1454, 1705, 2410, 3347
Hpy99I CGWCG 3 cut(s) 248, 3164, 3263
HpyCH4IV ACGT 6 cut(s) 30, 312, 1068, 1306, 1324, 1590
HpyF10VI GCNNNNNNNGC 5 cut(s) 350, 437, 646, 2656, 3199
HpyF3I CTNAG 7 cut(s) 329, 809, 1126, 1368, 2296, 2482, 2522
HpySE526I ACGT 6 cut(s) 30, 312, 1068, 1306, 1324, 1590
Hsp92I GRCGYC 1 cut(s) 3264
HspAI GCGC 2 cut(s) 3264, 3323
KasI GGCGCC 1 cut(s) 3263
Kpn2I TCCGGA 2 cut(s) 14, 3019
Ksp22I TGATCA 2 cut(s) 76, 2307
LguI GCTCTTC 1 cut(s) 156
LmnI GCTCC 5 cut(s) 1274, 2664, 3190, 3199, 3330
Lsp1109I GCAGC 2 cut(s) 425, 2511
LweI GCATC 2 cut(s) 2343, 2379
MaeI CTAG 6 cut(s) 366, 437, 521, 1151, 1787, 1979
MaeII ACGT 6 cut(s) 30, 312, 1068, 1306, 1324, 1590
MfeI CAATTG 1 cut(s) 383
MflI RGATCY 5 cut(s) 433, 1095, 1153, 1723, 3231
MhlI GDGCHC 5 cut(s) 474, 534, 1279, 1429, 3002
MlsI TGGCCA 2 cut(s) 1718, 3279
MluNI TGGCCA 2 cut(s) 1718, 3279
Mly113I GGCGCC 1 cut(s) 3264
MlyI GAGTC 6 cut(s) 194, 485, 785, 1124, 1277, 2067
MmeI TCCRAC 3 cut(s) 1224, 2686, 2848
Mox20I TGGCCA 2 cut(s) 1718, 3279
Mph1103I ATGCAT 1 cut(s) 1842
MroI TCCGGA 2 cut(s) 14, 3019
MroXI GAANNNNTTC 2 cut(s) 1196, 3015
MscI TGGCCA 2 cut(s) 1718, 3279
MslI CAYNNNNRTG 2 cut(s) 591, 1110
Msp20I TGGCCA 2 cut(s) 1718, 3279
MspA1I CMGCKG 1 cut(s) 2502
MspCI CTTAAG 2 cut(s) 2174, 2540
MspI CCGG 6 cut(s) 15, 1764, 2720, 2943, 3020, 3328
MspR9I CCNGG 4 cut(s) 548, 2678, 2721, 2944
MunI CAATTG 1 cut(s) 383
Mva1269I GAATGC 2 cut(s) 2115, 3085
MvaI CCWGG 2 cut(s) 548, 2678
MvnI CGCG 1 cut(s) 599
MwoI GCNNNNNNNGC 5 cut(s) 350, 437, 646, 2656, 3199
NarI GGCGCC 1 cut(s) 3264
NciI CCSGG 2 cut(s) 2721, 2944
NcoI CCATGG 1 cut(s) 2585
NlaIV GGNNCC 4 cut(s) 239, 723, 3265, 3407
NmeAIII GCCGAG 1 cut(s) 3208
NmuCI GTSAC 7 cut(s) 186, 1297, 1559, 1586, 1934, 2873, 3141
NsiI ATGCAT 1 cut(s) 1842
NspI RCATGY 1 cut(s) 1403
NspV TTCGAA 3 cut(s) 212, 1392, 3009
PaeI GCATGC 1 cut(s) 1403
PaeR7I CTCGAG 1 cut(s) 3227
PagI TCATGA 2 cut(s) 255, 1960
PaqCI CACCTGC 1 cut(s) 1406
PceI AGGCCT 2 cut(s) 2274, 2513
PciSI GCTCTTC 1 cut(s) 156
PcsI WCGNNNNNNNCGW 1 cut(s) 187
PctI GAATGC 2 cut(s) 2115, 3085
PdmI GAANNNNTTC 2 cut(s) 1196, 3015
PfeI GAWTC 9 cut(s) 508, 701, 728, 839, 964, 1907, 2150, 3030, 3097
PflMI CCANNNNNTGG 1 cut(s) 3344
PfoI TCCNGGA 1 cut(s) 546
PkrI GCNGC 2 cut(s) 415, 2501
PleI GAGTC 6 cut(s) 193, 484, 785, 1123, 1276, 2067
PluTI GGCGCC 1 cut(s) 3267
PmaCI CACGTG 1 cut(s) 1307
PmlI CACGTG 1 cut(s) 1307
PpsI GAGTC 6 cut(s) 193, 484, 785, 1123, 1276, 2067
Ppu21I YACGTR 2 cut(s) 1307, 1325
PpuMI RGGWCCY 2 cut(s) 276, 676
PshAI GACNNNNGTC 1 cut(s) 542
PshBI ATTAAT 2 cut(s) 800, 1253
PsiI TTATAA 1 cut(s) 1236
Psp5II RGGWCCY 2 cut(s) 276, 676
Psp6I CCWGG 2 cut(s) 546, 2676
PspCI CACGTG 1 cut(s) 1307
PspFI CCCAGC 2 cut(s) 2423, 3209
PspGI CCWGG 2 cut(s) 546, 2676
PspN4I GGNNCC 4 cut(s) 239, 723, 3265, 3407
PspPI GGNCC 4 cut(s) 276, 676, 2036, 3432
PspPPI RGGWCCY 2 cut(s) 276, 676
PsrI GAACNNNNNNTAC 2 cut(s) 807, 839
PstI CTGCAG 1 cut(s) 1756
PstNI CAGNNNCTG 1 cut(s) 3100
PsuI RGATCY 5 cut(s) 433, 1095, 1153, 1723, 3231
RsaI GTAC 6 cut(s) 753, 1622, 2129, 2230, 2338, 2583
RsaNI GTAC 6 cut(s) 752, 1621, 2128, 2229, 2337, 2582
RseI CAYNNNNRTG 2 cut(s) 591, 1110
SapI GCTCTTC 1 cut(s) 156
SatI GCNGC 2 cut(s) 414, 2500
Sau96I GGNCC 4 cut(s) 276, 676, 2036, 3432
SchI GAGTC 6 cut(s) 194, 485, 785, 1124, 1277, 2067
ScrFI CCNGG 4 cut(s) 548, 2678, 2721, 2944
SduI GDGCHC 5 cut(s) 474, 534, 1279, 1429, 3002
SfaNI GCATC 2 cut(s) 2343, 2379
SfcI CTRYAG 2 cut(s) 1752, 2631
SfoI GGCGCC 1 cut(s) 3265
Sfr274I CTCGAG 1 cut(s) 3227
SfuI TTCGAA 3 cut(s) 212, 1392, 3009
SinI GGWCC 3 cut(s) 276, 676, 2036
SlaI CTCGAG 1 cut(s) 3227
SmiMI CAYNNNNRTG 2 cut(s) 591, 1110
SphI GCATGC 1 cut(s) 1403
SseBI AGGCCT 2 cut(s) 2274, 2513
SsiI CCGC 4 cut(s) 409, 525, 599, 2502
SspDI GGCGCC 1 cut(s) 3263
SspI AATATT 3 cut(s) 924, 1832, 2735
SspMI CTAG 6 cut(s) 366, 437, 521, 1151, 1787, 1979
StuI AGGCCT 2 cut(s) 2274, 2513
StyD4I CCNGG 4 cut(s) 546, 2676, 2719, 2942
StyI CCWWGG 1 cut(s) 2585
TaiI ACGT 6 cut(s) 33, 315, 1071, 1309, 1327, 1593
TaqII GACCGA 1 cut(s) 554
TatI WGTACW 1 cut(s) 2228
TfiI GAWTC 9 cut(s) 508, 701, 728, 839, 964, 1907, 2150, 3030, 3097
TscAI CASTG 4 cut(s) 79, 510, 1564, 1909
TseFI GTSAC 7 cut(s) 186, 1297, 1559, 1586, 1934, 2873, 3141
TseI GCWGC 2 cut(s) 413, 2499
Tsp45I GTSAC 7 cut(s) 186, 1297, 1559, 1586, 1934, 2873, 3141
TspDTI ATGAA 9 cut(s) 461, 474, 475, 912, 966, 1326, 1551, 1825, 1932
TspGWI ACGGA 1 cut(s) 686
TspRI CASTG 4 cut(s) 79, 510, 1564, 1909
Van91I CCANNNNNTGG 1 cut(s) 3344
Vha464I CTTAAG 2 cut(s) 2174, 2540
VneI GTGCAC 1 cut(s) 1425
VpaK11BI GGWCC 3 cut(s) 276, 676, 2036
VspI ATTAAT 2 cut(s) 800, 1253
XagI CCTNNNNNAGG 1 cut(s) 683
XapI RAATTY 4 cut(s) 448, 1079, 1880, 3005
XceI RCATGY 1 cut(s) 1403
XhoI CTCGAG 1 cut(s) 3227
XmiI GTMKAC 3 cut(s) 1017, 1453, 2409
XmnI GAANNNNTTC 2 cut(s) 1196, 3015
XspI CTAG 6 cut(s) 366, 437, 521, 1151, 1787, 1979
Zsp2I ATGCAT 1 cut(s) 1842
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.