MD10G1306900.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Forward (+)
39247535 .. 39251133
3599 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1306900.v1.1.491

Sequence Viewer

Length: 2355 bp
ATGGGTATTATTAACTCGCAAAGTTTTTGTGATTTCCTATTCTTCTCTATCATCTCGCTTCTTCTGTCGCAGATTTCTTCTGCTGCAAAAGTTTATAACATAACTTCTTTGCAACCATTAGCACAGGGACAAACTCTCGTCTCCTCTGGTGGCATTTTCGAATTGGGGTTCTTTAGTCCTAACAGTTCTGCTAACAAGTACGTTGGGATATGGCACAAGAGTGTATTTCCGCGGAAAGTTGTATGGGTGGCCAACAGAGACAGCCCTCTTGCAGTTACAGACGCATTAGCTACTTTGACAATCACGAGCAATGGAAATCTGCAGCTTGTAGATGGGAAGCGGAATTCAGTTTGGTCAACGAATATTTCGGTGTTATCTGACGGTTCAGCAGCTGCACTTCTTTTAGACAACGGAAACTTTGTTGTCAAATTCAATACAGGAGATGAGTACCTATGGGAGAGCTTTGATTATCCTGGCGACACAATTCTGCCGAGTATGCTGCTGGGATTCGATAGTAAATCTGGTAAGCGGAGTTTCTTGACTTCTTGGAAAAGTGAGAATGATCCATCAACCGGAGAATTCGTGCTTGGATTGACACCACAGAACCCGGCACAGATTTTCATTTGGATTAATGGATCAACTCCATTTTGGAGAAGCGGTCCGTGGGAAAAATCAATGTTCATCGGCATACCAGGCAGGGATGATCAATATCTAAGTGGATTTCATCTGGATGCTAATGTGCAGCAGGGAACAAAGTATTTCTGGTACAATTTGTTCGACAAGACTGTGGAATATATGTACATCTCTTCGAAAGGAATACATAAGTGTATGGATTCAAAAAATGGAGAAAACTGGAATCTTCACTGGGAGACCCCAAAAATTCCATGTGACATCTATGGAACGTGCGGACCTTTTGGGGTTTGCGAAGCTTCAGAATCTTCAACTACTCCGATCTGCAAGTGTTTGAAAGGGTTTGCACCCAAGTCAGTTGATGAATGGAGCAGGGGAAACAGGACAAGAGGTTGTGTGAGGCAAACCCAATTGTTTTGTGGGAGTAACACAAGTCAGTCAGTTTCTTTGAGCAGAAAAGAAGATGGGTTTTGGAAAATGTCAAATGTAAAACTACCAGATTATCATGAATATTCGCCTTTATATGAAGAAGACTGCAGGATACTTTGCCGAGATAATTGTTCGTGCTTGGCTTATGCTTACGTTAACACTATAGGTTGTTTGGTCTGGTCCAAAGACCTTATTGATATTTCGGAGTTTTCCTCTGGTGGAGCAGATCTTTTTATCCGCTTAGCAAACGCGGAACTCGGTGAAGAAGGAAAGCGAATAAAGTTAGTTGCCAGCCTCGTATCAATTTGTTTTATTATCATGGCTGCCATTGTGTTCGGTTTGTACAAGTTGCGAGTTAACCCAAAGGGAATCATCAAAGTGACGAGAAATGAGATTAGATTGACTGATACAAATGAGACATCAAGAGAGAGTCTTCGAGAATATATCAGAACACATGATCCATCAGAGCTATTAGTCTACGAATATGATTTCAATAGCATATTAATTGCTACGAGCAATTTCAGCATCACAAACAAGCTTGGAGAAGGAGGATTTGGAGCAGTTTATTGGGGTAAGCTAGAAGAAGGGAAGGAAATAGCAGTAAAAAGACTATCCAGCTGCTCGGGGCAAGGCATAGAAGAGTTCAAGAATGAGATGTTGTTGATCTCCAAACTCCAACACAAGAACCTTGTAAGGCTGATGGGCTGCGGCATCAAAGACGATGAGAAGTTAATAATTTACGAGTTCATGCAAAACAAAAGCTTGGACACTCTTTTATTCGATCCAATGAAAAGGGGAGTGCTTGATTGGGCTAAACGCTTCAATATTATTCAAGGTGTAGCCAGAGGACTTCTTTACCTCCATCGTGATTCCTGTTTGAAGGTAATACATAGAGATTTGAAGGCAAGTAATATACTCTTGGATGAGAACATGAACCCAAAAATTTCAGATTTTGGACTGGCGCGTATCTTTCAAGGGACACAAAACTTAGCAAACACTCAGAAGGTTGCAGGAACTCTTGGCTATATGTCTCCAGAGTATGCCATGCGCGGGATATTTTCTGAAAAATCTGACGTGTATAGCTTCGGGGTCTTGGTATTGGAGATTATTGGCGGCTGGAAGAATACCAGCTTCTATGACCACGAAACAGAGCAATGCTTCCTACCTTATGTATGGCACATCTGGAGTGAAGGCAAGGGATTGTACTTATTAGACGAAGTATTGGCGGATTCATATTCTGCATCAGAAGCAATGAGATGCTTGCATGTTGGGCTTCTTTGTGTACAAGACTATTGA

Protein Analysis

785

Amino Acids

88.05

Weight (kDa)

5.95

Isoelectric Point (pI)

36.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 80 - 184 6.6e-31 D-mannose binding lectin
S_locus_glycop PF00954 217 - 329 1.8e-26 S-locus glycoprotein domain
PAN_2 PF08276 362 - 420 1.1e-15 PAN-like domain
Pkinase PF00069 528 - 725 8e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 529 - 724 2.1e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 96
AccI GTMKAC 1 cut(s) 1536
AccII CGCG 4 cut(s) 232, 1310, 2023, 2109
AclWI GGATC 4 cut(s) 557, 643, 1511, 1835
AcoI YGGCCR 1 cut(s) 249
AcsI RAATTY 5 cut(s) 343, 428, 578, 879, 2001
AcuI CTGAAG 1 cut(s) 915
AfaI GTAC 7 cut(s) 200, 449, 767, 800, 1403, 2264, 2343
AfiI CCNNNNNNNGG 2 cut(s) 572, 2109
AflIII ACRYGT 1 cut(s) 2133
AjiI CACGTC 1 cut(s) 2134
AjnI CCWGG 2 cut(s) 472, 691
AjuI GAANNNNNNNTTGG 4 cut(s) 570, 602, 1596, 1628
AleI CACNNNNGTG 1 cut(s) 219
AloI GAACNNNNNNTCC 2 cut(s) 1501, 1533
Alw26I GTCTC 5 cut(s) 145, 252, 863, 1469, 2094
AlwI GGATC 4 cut(s) 557, 643, 1511, 1835
AlwNI CAGNNNCTG 1 cut(s) 392
Ama87I CYCGRG 1 cut(s) 1681
AoxI GGCC 1 cut(s) 249
ApeKI GCWGC 9 cut(s) 83, 322, 389, 392, 499, 742, 1382, 1677, 1764
ApoI RAATTY 5 cut(s) 343, 428, 578, 879, 2001
AseI ATTAAT 2 cut(s) 630, 1562
AspLEI GCGC 2 cut(s) 2023, 2109
AspS9I GGNCC 3 cut(s) 659, 908, 1239
AsuC2I CCSGG 1 cut(s) 608
AsuHPI GGTGA 1 cut(s) 1331
AsuII TTCGAA 2 cut(s) 159, 809
AvaI CYCGRG 1 cut(s) 1681
AvaII GGWCC 3 cut(s) 659, 908, 1239
BalI TGGCCA 1 cut(s) 251
BauI CACGAG 1 cut(s) 304
BbsI GAAGAC 2 cut(s) 1167, 1484
BbvI GCAGC 9 cut(s) 70, 334, 379, 401, 486, 754, 1369, 1664, 1751
BccI CCATC 6 cut(s) 326, 574, 1088, 1528, 1753, 1929
BcgI CGANNNNNNTGC 2 cut(s) 481, 515
BciT130I CCWGG 2 cut(s) 474, 693
BciVI GTATCC 1 cut(s) 1164
BclI TGATCA 1 cut(s) 703
BcnI CCSGG 1 cut(s) 608
BcoDI GTCTC 5 cut(s) 145, 252, 863, 1469, 2094
BfaI CTAG 1 cut(s) 1637
BfmI CTRYAG 3 cut(s) 320, 1165, 1221
BfuI GTATCC 1 cut(s) 1164
BglII AGATCT 1 cut(s) 1285
BlpI GCTNAGC 1 cut(s) 1300
Bme1390I CCNGG 3 cut(s) 474, 608, 693
Bme18I GGWCC 3 cut(s) 659, 908, 1239
BmeT110I CYCGRG 1 cut(s) 1681
BmgBI CACGTC 1 cut(s) 2134
BmgT120I GGNCC 3 cut(s) 659, 908, 1239
BmrFI CCNGG 3 cut(s) 474, 608, 693
BmrI ACTGGG 1 cut(s) 874
BmsI GCATC 5 cut(s) 721, 1593, 1779, 2306, 2309
BmuI ACTGGG 1 cut(s) 874
BpiI GAAGAC 2 cut(s) 1167, 1484
BplI GAGNNNNNCTC 2 cut(s) 1256, 1288
BpmI CTGGAG 2 cut(s) 2076, 2263
Bpu1102I GCTNAGC 1 cut(s) 1300
Bpu14I TTCGAA 2 cut(s) 159, 809
BpuMI CCSGG 1 cut(s) 608
BsaBI GATNNNNATC 1 cut(s) 708
BsaI GGTCTC 1 cut(s) 863
BsaJI CCNNGG 2 cut(s) 230, 662
BsaWI WCCGGW 1 cut(s) 572
BsaXI ACNNNNNCTCC 4 cut(s) 567, 597, 643, 673
Bsc4I CCNNNNNNNGG 2 cut(s) 572, 2109
Bse1I ACTGG 3 cut(s) 857, 869, 2022
Bse3DI GCAATG 3 cut(s) 316, 2219, 2316
Bse8I GATNNNNATC 1 cut(s) 708
BseBI CCWGG 2 cut(s) 474, 693
BseDI CCNNGG 2 cut(s) 230, 662
BseGI GGATG 3 cut(s) 706, 736, 1987
BseJI GATNNNNATC 1 cut(s) 708
BseLI CCNNNNNNNGG 2 cut(s) 572, 2109
BseMI GCAATG 3 cut(s) 316, 2219, 2316
BseMII CTCAG 1 cut(s) 2072
BseNI ACTGG 3 cut(s) 857, 869, 2022
BseRI GAGGAG 1 cut(s) 133
BseXI GCAGC 9 cut(s) 70, 334, 379, 401, 486, 754, 1369, 1664, 1751
BseYI CCCAGC 1 cut(s) 502
BsgI GTGCAG 2 cut(s) 378, 761
Bsh1236I CGCG 4 cut(s) 232, 1310, 2023, 2109
BshFI GGCC 1 cut(s) 251
BsiHKCI CYCGRG 1 cut(s) 1681
BsiSI CCGG 2 cut(s) 573, 608
BslFI GGGAC 2 cut(s) 141, 2050
BslI CCNNNNNNNGG 2 cut(s) 572, 2109
BsmAI GTCTC 5 cut(s) 145, 252, 863, 1469, 2094
BsmBI CGTCTC 1 cut(s) 145
BsmFI GGGAC 2 cut(s) 141, 2050
BsnI GGCC 1 cut(s) 251
Bso31I GGTCTC 1 cut(s) 863
BsoBI CYCGRG 1 cut(s) 1681
Bsp119I TTCGAA 2 cut(s) 159, 809
Bsp1407I TGTACA 3 cut(s) 798, 1401, 2341
Bsp143I GATC 8 cut(s) 562, 635, 703, 951, 1285, 1516, 1722, 1840
Bsp1720I GCTNAGC 1 cut(s) 1300
BspANI GGCC 1 cut(s) 251
BspCNI CTCAG 1 cut(s) 2071
BspFNI CGCG 4 cut(s) 232, 1310, 2023, 2109
BspHI TCATGA 1 cut(s) 1135
BspMAI CTGCAG 2 cut(s) 324, 1169
BspPI GGATC 4 cut(s) 557, 643, 1511, 1835
BspT104I TTCGAA 2 cut(s) 159, 809
BspTNI GGTCTC 1 cut(s) 863
BsrDI GCAATG 3 cut(s) 316, 2219, 2316
BsrGI TGTACA 3 cut(s) 798, 1401, 2341
BsrI ACTGG 3 cut(s) 857, 869, 2022
BssECI CCNNGG 2 cut(s) 230, 662
BssMI GATC 8 cut(s) 562, 635, 703, 951, 1285, 1516, 1722, 1840
BssSI CACGAG 1 cut(s) 304
Bst2BI CACGAG 1 cut(s) 304
Bst2UI CCWGG 2 cut(s) 474, 693
Bst4CI ACNGT 3 cut(s) 185, 383, 787
Bst6I CTCTTC 2 cut(s) 811, 1692
BstAUI TGTACA 3 cut(s) 798, 1401, 2341
BstBI TTCGAA 2 cut(s) 159, 809
BstC8I GCNNGC 2 cut(s) 1351, 2321
BstDEI CTNAG 4 cut(s) 713, 1300, 2047, 2058
BstDSI CCRYGG 2 cut(s) 230, 662
BstF5I GGATG 3 cut(s) 706, 736, 1987
BstFNI CGCG 4 cut(s) 232, 1310, 2023, 2109
BstHHI GCGC 2 cut(s) 2023, 2109
BstKTI GATC 8 cut(s) 565, 638, 706, 954, 1288, 1519, 1725, 1843
BstMAI GTCTC 5 cut(s) 145, 252, 863, 1469, 2094
BstMBI GATC 8 cut(s) 562, 635, 703, 951, 1285, 1516, 1722, 1840
BstMWI GCNNNNNNNGC 5 cut(s) 496, 693, 1581, 2306, 2329
BstNI CCWGG 2 cut(s) 474, 693
BstNSI RCATGY 1 cut(s) 2327
BstSCI CCNGG 3 cut(s) 472, 606, 691
BstSFI CTRYAG 3 cut(s) 320, 1165, 1221
BstUI CGCG 4 cut(s) 232, 1310, 2023, 2109
BstV1I GCAGC 9 cut(s) 70, 334, 379, 401, 486, 754, 1369, 1664, 1751
BstV2I GAAGAC 2 cut(s) 1167, 1484
BstX2I RGATCY 1 cut(s) 1285
BstYI RGATCY 1 cut(s) 1285
BsuI GTATCC 1 cut(s) 1164
BsuRI GGCC 1 cut(s) 251
BtgI CCRYGG 2 cut(s) 230, 662
BtrI CACGTC 1 cut(s) 2134
BtsCI GGATG 3 cut(s) 706, 736, 1987
BtsIMutI CAGTG 1 cut(s) 862
Cac8I GCNNGC 2 cut(s) 1351, 2321
CaiI CAGNNNCTG 1 cut(s) 392
CciI TCATGA 1 cut(s) 1135
CfoI GCGC 2 cut(s) 2023, 2109
Cfr13I GGNCC 3 cut(s) 659, 908, 1239
Cfr42I CCGCGG 1 cut(s) 233
CpoI CGGWCCG 1 cut(s) 659
CseI GACGC 1 cut(s) 290
Csp6I GTAC 7 cut(s) 199, 448, 766, 799, 1402, 2263, 2342
CspI CGGWCCG 1 cut(s) 659
CviAII CATG 8 cut(s) 885, 1136, 1378, 1514, 1807, 1990, 2104, 2324
CviQI GTAC 7 cut(s) 199, 448, 766, 799, 1402, 2263, 2342
DdeI CTNAG 4 cut(s) 713, 1300, 2047, 2058
DpnI GATC 8 cut(s) 564, 637, 705, 953, 1287, 1518, 1724, 1842
DpnII GATC 8 cut(s) 562, 635, 703, 951, 1285, 1516, 1722, 1840
EaeI YGGCCR 1 cut(s) 249
Eam1104I CTCTTC 2 cut(s) 811, 1692
EarI CTCTTC 2 cut(s) 811, 1692
EciI GGCGGA 1 cut(s) 2300
Eco31I GGTCTC 1 cut(s) 863
Eco47I GGWCC 3 cut(s) 659, 908, 1239
Eco57I CTGAAG 1 cut(s) 915
Eco88I CYCGRG 1 cut(s) 1681
EcoRI GAATTC 2 cut(s) 343, 578
EcoRII CCWGG 2 cut(s) 472, 691
Esp3I CGTCTC 1 cut(s) 145
FaeI CATG 8 cut(s) 888, 1139, 1381, 1517, 1810, 1993, 2107, 2327
FaqI GGGAC 2 cut(s) 141, 2050
FatI CATG 8 cut(s) 884, 1135, 1377, 1513, 1806, 1989, 2103, 2323
FauI CCCGC 1 cut(s) 2102
FbaI TGATCA 1 cut(s) 703
FblI GTMKAC 1 cut(s) 1536
FokI GGATG 3 cut(s) 713, 743, 1994
FspBI CTAG 1 cut(s) 1637
GlaI GCGC 2 cut(s) 2022, 2108
GsaI CCCAGC 1 cut(s) 506
GsuI CTGGAG 2 cut(s) 2076, 2263
HaeIII GGCC 1 cut(s) 251
HapII CCGG 2 cut(s) 573, 608
HgaI GACGC 1 cut(s) 290
HhaI GCGC 2 cut(s) 2023, 2109
Hin1II CATG 8 cut(s) 888, 1139, 1381, 1517, 1810, 1993, 2107, 2327
Hin6I GCGC 2 cut(s) 2021, 2107
HinP1I GCGC 2 cut(s) 2021, 2107
HincII GTYRAC 3 cut(s) 357, 1216, 1417
HindII GTYRAC 3 cut(s) 357, 1216, 1417
HindIII AAGCTT 3 cut(s) 927, 1595, 1819
HinfI GANTC 8 cut(s) 507, 833, 856, 935, 1428, 1489, 1928, 2288
HpaI GTTAAC 2 cut(s) 1216, 1417
HpaII CCGG 2 cut(s) 573, 608
HphI GGTGA 1 cut(s) 1331
Hpy166II GTNNAC 5 cut(s) 357, 1216, 1417, 1537, 2342
Hpy8I GTNNAC 5 cut(s) 357, 1216, 1417, 1537, 2342
HpyAV CCTTC 8 cut(s) 1319, 1598, 1637, 1642, 1933, 1954, 2056, 2243
HpyCH4III ACNGT 3 cut(s) 185, 383, 787
HpyCH4IV ACGT 4 cut(s) 201, 902, 1212, 2133
HpyF10VI GCNNNNNNNGC 5 cut(s) 496, 693, 1581, 2306, 2329
HpyF3I CTNAG 4 cut(s) 713, 1300, 2047, 2058
HpySE526I ACGT 4 cut(s) 201, 902, 1212, 2133
Hsp92II CATG 8 cut(s) 888, 1139, 1381, 1517, 1810, 1993, 2107, 2327
HspAI GCGC 2 cut(s) 2021, 2107
Ksp22I TGATCA 1 cut(s) 703
KspAI GTTAAC 2 cut(s) 1216, 1417
KspI CCGCGG 1 cut(s) 233
Kzo9I GATC 8 cut(s) 562, 635, 703, 951, 1285, 1516, 1722, 1840
LmnI GCTCC 3 cut(s) 999, 1280, 1616
Lsp1109I GCAGC 9 cut(s) 70, 334, 379, 401, 486, 754, 1369, 1664, 1751
LweI GCATC 5 cut(s) 721, 1593, 1779, 2306, 2309
MaeI CTAG 1 cut(s) 1637
MaeII ACGT 4 cut(s) 201, 902, 1212, 2133
MaeIII GTNAC 4 cut(s) 274, 887, 1055, 1438
MalI GATC 8 cut(s) 564, 637, 705, 953, 1287, 1518, 1724, 1842
MboI GATC 8 cut(s) 562, 635, 703, 951, 1285, 1516, 1722, 1840
MfeI CAATTG 1 cut(s) 1040
MflI RGATCY 1 cut(s) 1285
MlsI TGGCCA 1 cut(s) 251
MluNI TGGCCA 1 cut(s) 251
MlyI GAGTC 1 cut(s) 1498
MmeI TCCRAC 1 cut(s) 1759
MnlI CCTC 9 cut(s) 154, 276, 1013, 1023, 1282, 1364, 1601, 1898, 1928
Mox20I TGGCCA 1 cut(s) 251
MscI TGGCCA 1 cut(s) 251
MseI TTAA 6 cut(s) 12, 630, 1215, 1416, 1562, 1790
MslI CAYNNNNRTG 3 cut(s) 219, 729, 1436
Msp20I TGGCCA 1 cut(s) 251
MspA1I CMGCKG 3 cut(s) 232, 392, 1677
MspI CCGG 2 cut(s) 573, 608
MspR9I CCNGG 3 cut(s) 474, 608, 693
MunI CAATTG 1 cut(s) 1040
MvaI CCWGG 2 cut(s) 474, 693
MvnI CGCG 4 cut(s) 232, 1310, 2023, 2109
MwoI GCNNNNNNNGC 5 cut(s) 496, 693, 1581, 2306, 2329
NciI CCSGG 1 cut(s) 608
NdeII GATC 8 cut(s) 562, 635, 703, 951, 1285, 1516, 1722, 1840
NlaIII CATG 8 cut(s) 888, 1139, 1381, 1517, 1810, 1993, 2107, 2327
NmeAIII GCCGAG 2 cut(s) 516, 1205
NmuCI GTSAC 2 cut(s) 887, 1438
NspI RCATGY 1 cut(s) 2327
NspV TTCGAA 2 cut(s) 159, 809
OliI CACNNNNGTG 1 cut(s) 219
PagI TCATGA 1 cut(s) 1135
PfeI GAWTC 7 cut(s) 507, 833, 856, 935, 1428, 1928, 2288
PleI GAGTC 1 cut(s) 1497
PpsI GAGTC 1 cut(s) 1497
PshBI ATTAAT 2 cut(s) 630, 1562
PsiI TTATAA 1 cut(s) 96
Psp6I CCWGG 2 cut(s) 472, 691
PspFI CCCAGC 1 cut(s) 502
PspGI CCWGG 2 cut(s) 472, 691
PspPI GGNCC 3 cut(s) 659, 908, 1239
PsrI GAACNNNNNNTAC 2 cut(s) 758, 790
PstI CTGCAG 2 cut(s) 324, 1169
PstNI CAGNNNCTG 1 cut(s) 392
PsuI RGATCY 1 cut(s) 1285
PvuII CAGCTG 2 cut(s) 392, 1677
RsaI GTAC 7 cut(s) 200, 449, 767, 800, 1403, 2264, 2343
RsaNI GTAC 7 cut(s) 199, 448, 766, 799, 1402, 2263, 2342
RseI CAYNNNNRTG 3 cut(s) 219, 729, 1436
Rsr2I CGGWCCG 1 cut(s) 659
RsrII CGGWCCG 1 cut(s) 659
SacII CCGCGG 1 cut(s) 233
SaqAI TTAA 6 cut(s) 12, 630, 1215, 1416, 1562, 1790
Sau3AI GATC 8 cut(s) 562, 635, 703, 951, 1285, 1516, 1722, 1840
Sau96I GGNCC 3 cut(s) 659, 908, 1239
SchI GAGTC 1 cut(s) 1498
ScrFI CCNGG 3 cut(s) 474, 608, 693
SfaNI GCATC 5 cut(s) 721, 1593, 1779, 2306, 2309
SfcI CTRYAG 3 cut(s) 320, 1165, 1221
Sfr303I CCGCGG 1 cut(s) 233
SfuI TTCGAA 2 cut(s) 159, 809
SgrBI CCGCGG 1 cut(s) 233
SinI GGWCC 3 cut(s) 659, 908, 1239
SmiMI CAYNNNNRTG 3 cut(s) 219, 729, 1436
SspI AATATT 3 cut(s) 364, 1142, 1885
SspMI CTAG 1 cut(s) 1637
StyD4I CCNGG 3 cut(s) 472, 606, 691
TaaI ACNGT 3 cut(s) 185, 383, 787
TaiI ACGT 4 cut(s) 204, 905, 1215, 2136
TaqI TCGA 6 cut(s) 159, 510, 777, 809, 1495, 1839
TatI WGTACW 4 cut(s) 798, 1401, 2262, 2341
TauI GCSGC 2 cut(s) 1770, 2175
TfiI GAWTC 7 cut(s) 507, 833, 856, 935, 1428, 1928, 2288
Tru1I TTAA 6 cut(s) 12, 630, 1215, 1416, 1562, 1790
Tru9I TTAA 6 cut(s) 12, 630, 1215, 1416, 1562, 1790
TscAI CASTG 1 cut(s) 869
TseFI GTSAC 2 cut(s) 887, 1438
TseI GCWGC 9 cut(s) 83, 322, 389, 392, 499, 742, 1382, 1677, 1764
Tsp45I GTSAC 2 cut(s) 887, 1438
TspGWI ACGGA 2 cut(s) 426, 651
TspRI CASTG 1 cut(s) 869
VpaK11BI GGWCC 3 cut(s) 659, 908, 1239
VspI ATTAAT 2 cut(s) 630, 1562
XapI RAATTY 5 cut(s) 343, 428, 578, 879, 2001
XceI RCATGY 1 cut(s) 2327
XcmI CCANNNNNNNNNTGG 1 cut(s) 1046
XmiI GTMKAC 1 cut(s) 1536
XspI CTAG 1 cut(s) 1637
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.