PAN-like domain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1224 |
| Acc36I | ACCTGC | 1 cut(s) | 1068 |
| Acc65I | GGTACC | 1 cut(s) | 700 |
| AccB1I | GGYRCC | 3 cut(s) | 379, 700, 883 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 389, 584 |
| AccIII | TCCGGA | 1 cut(s) | 533 |
| AciI | CCGC | 5 cut(s) | 160, 417, 1293, 2118, 2294 |
| AclWI | GGATC | 6 cut(s) | 449, 569, 1526, 1772, 1844, 2424 |
| AcsI | RAATTY | 3 cut(s) | 352, 421, 2010 |
| AcuI | CTGAAG | 4 cut(s) | 117, 270, 1074, 2385 |
| AcyI | GRCGYC | 1 cut(s) | 813 |
| AfaI | GTAC | 6 cut(s) | 28, 209, 702, 831, 987, 2108 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 389, 584, 1292, 1293, 1948, 2118 |
| AflII | CTTAAG | 1 cut(s) | 839 |
| AflIII | ACRYGT | 2 cut(s) | 914, 2341 |
| AgeI | ACCGGT | 1 cut(s) | 886 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2052 |
| AjnI | CCWGG | 2 cut(s) | 557, 756 |
| Alw21I | GWGCWC | 1 cut(s) | 1410 |
| Alw26I | GTCTC | 5 cut(s) | 154, 820, 1414, 2103, 2405 |
| AlwI | GGATC | 6 cut(s) | 449, 569, 1526, 1772, 1844, 2424 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 864, 1423 |
| Ama87I | CYCGRG | 3 cut(s) | 1607, 1690, 2102 |
| Aor13HI | TCCGGA | 1 cut(s) | 533 |
| AoxI | GGCC | 2 cut(s) | 1624, 2372 |
| ApeKI | GCWGC | 7 cut(s) | 281, 315, 398, 511, 858, 1773, 1776 |
| ApoI | RAATTY | 3 cut(s) | 352, 421, 2010 |
| AseI | ATTAAT | 1 cut(s) | 642 |
| AsiGI | ACCGGT | 1 cut(s) | 886 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1506 |
| Asp718I | GGTACC | 1 cut(s) | 700 |
| AspLEI | GCGC | 3 cut(s) | 1225, 1428, 1860 |
| AspS9I | GGNCC | 2 cut(s) | 1254, 1625 |
| AsuHPI | GGTGA | 1 cut(s) | 901 |
| AsuII | TTCGAA | 1 cut(s) | 168 |
| AvaI | CYCGRG | 3 cut(s) | 1607, 1690, 2102 |
| AvaII | GGWCC | 1 cut(s) | 1254 |
| BanI | GGYRCC | 3 cut(s) | 379, 700, 883 |
| BanII | GRGCYC | 1 cut(s) | 1920 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1819, 1851 |
| Bbv12I | GWGCWC | 1 cut(s) | 1410 |
| BbvI | GCAGC | 7 cut(s) | 293, 327, 385, 498, 870, 1760, 1763 |
| BccI | CCATC | 7 cut(s) | 335, 391, 586, 628, 1100, 1114, 1543 |
| BceAI | ACGGC | 1 cut(s) | 1691 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 1450, 1484, 2311, 2317, 2345, 2351 |
| BciT130I | CCWGG | 2 cut(s) | 559, 758 |
| BciVI | GTATCC | 1 cut(s) | 1828 |
| BclI | TGATCA | 1 cut(s) | 1060 |
| BcoDI | GTCTC | 5 cut(s) | 154, 820, 1414, 2103, 2405 |
| BfaI | CTAG | 7 cut(s) | 483, 1316, 1683, 1881, 1911, 2057, 2196 |
| BfmI | CTRYAG | 2 cut(s) | 399, 2146 |
| BfrI | CTTAAG | 1 cut(s) | 839 |
| BfuAI | ACCTGC | 1 cut(s) | 1068 |
| BfuI | GTATCC | 1 cut(s) | 1828 |
| BisI | GCNGC | 8 cut(s) | 160, 282, 316, 399, 512, 859, 1774, 1777 |
| BlsI | GCNGC | 8 cut(s) | 161, 283, 317, 400, 513, 860, 1775, 1778 |
| BmcAI | AGTACT | 1 cut(s) | 831 |
| Bme1390I | CCNGG | 2 cut(s) | 559, 758 |
| Bme18I | GGWCC | 1 cut(s) | 1254 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2052 |
| BmeT110I | CYCGRG | 3 cut(s) | 1607, 1690, 2102 |
| BmgT120I | GGNCC | 2 cut(s) | 1254, 1625 |
| BmiI | GGNNCC | 4 cut(s) | 381, 702, 885, 1919 |
| BmrFI | CCNGG | 2 cut(s) | 559, 758 |
| BmrI | ACTGGG | 1 cut(s) | 886 |
| BmsI | GCATC | 4 cut(s) | 94, 1181, 1713, 2315 |
| BmuI | ACTGGG | 1 cut(s) | 886 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1271, 1303 |
| BpmI | CTGGAG | 4 cut(s) | 350, 682, 1047, 1187 |
| Bpu14I | TTCGAA | 1 cut(s) | 168 |
| BpuEI | CTTGAG | 1 cut(s) | 1414 |
| BsaAI | YACGTR | 1 cut(s) | 211 |
| BsaHI | GRCGYC | 1 cut(s) | 813 |
| BsaJI | CCNNGG | 4 cut(s) | 239, 294, 757, 2112 |
| BsaWI | WCCGGW | 3 cut(s) | 533, 703, 886 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1020, 1050 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 389, 584, 1292, 1293, 1948, 2118 |
| Bse118I | RCCGGY | 2 cut(s) | 886, 2180 |
| Bse1I | ACTGG | 7 cut(s) | 665, 869, 881, 1030, 1257, 1346, 2274 |
| Bse3DI | GCAATG | 1 cut(s) | 325 |
| BseAI | TCCGGA | 1 cut(s) | 533 |
| BseBI | CCWGG | 2 cut(s) | 559, 758 |
| BseDI | CCNNGG | 4 cut(s) | 239, 294, 757, 2112 |
| BseGI | GGATG | 2 cut(s) | 1996, 2287 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 389, 584, 1292, 1293, 1948, 2118 |
| BseMI | GCAATG | 1 cut(s) | 325 |
| BseMII | CTCAG | 1 cut(s) | 824 |
| BseNI | ACTGG | 7 cut(s) | 665, 869, 881, 1030, 1257, 1346, 2274 |
| BseRI | GAGGAG | 1 cut(s) | 1721 |
| BseXI | GCAGC | 7 cut(s) | 293, 327, 385, 498, 870, 1760, 1763 |
| BseYI | CCCAGC | 2 cut(s) | 155, 514 |
| BshFI | GGCC | 2 cut(s) | 1626, 2374 |
| BshNI | GGYRCC | 3 cut(s) | 379, 700, 883 |
| BshTI | ACCGGT | 1 cut(s) | 886 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1410 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1607, 1690, 2102 |
| BsiSI | CCGG | 5 cut(s) | 534, 704, 887, 2181, 2384 |
| BslFI | GGGAC | 2 cut(s) | 626, 2280 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 389, 584, 1292, 1293, 1948, 2118 |
| BsmAI | GTCTC | 5 cut(s) | 154, 820, 1414, 2103, 2405 |
| BsmBI | CGTCTC | 2 cut(s) | 820, 2405 |
| BsmFI | GGGAC | 2 cut(s) | 626, 2280 |
| BsmI | GAATGC | 1 cut(s) | 1579 |
| BsnI | GGCC | 2 cut(s) | 1626, 2374 |
| BsoBI | CYCGRG | 3 cut(s) | 1607, 1690, 2102 |
| Bsp119I | TTCGAA | 1 cut(s) | 168 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1410, 1920 |
| Bsp13I | TCCGGA | 1 cut(s) | 533 |
| Bsp143I | GATC | 9 cut(s) | 454, 574, 1060, 1300, 1531, 1731, 1764, 1849, 2416 |
| Bsp19I | CCATGG | 1 cut(s) | 2112 |
| BspACI | CCGC | 5 cut(s) | 160, 417, 1293, 2118, 2294 |
| BspANI | GGCC | 2 cut(s) | 1626, 2374 |
| BspCNI | CTCAG | 1 cut(s) | 825 |
| BspEI | TCCGGA | 1 cut(s) | 533 |
| BspHI | TCATGA | 1 cut(s) | 1147 |
| BspLI | GGNNCC | 4 cut(s) | 381, 702, 885, 1919 |
| BspMAI | CTGCAG | 1 cut(s) | 403 |
| BspMI | ACCTGC | 1 cut(s) | 1068 |
| BspPI | GGATC | 6 cut(s) | 449, 569, 1526, 1772, 1844, 2424 |
| BspT104I | TTCGAA | 1 cut(s) | 168 |
| BspT107I | GGYRCC | 3 cut(s) | 379, 700, 883 |
| BspTI | CTTAAG | 1 cut(s) | 839 |
| BsrDI | GCAATG | 1 cut(s) | 325 |
| BsrFI | RCCGGY | 2 cut(s) | 886, 2180 |
| BsrI | ACTGG | 7 cut(s) | 665, 869, 881, 1030, 1257, 1346, 2274 |
| BssAI | RCCGGY | 2 cut(s) | 886, 2180 |
| BssECI | CCNNGG | 4 cut(s) | 239, 294, 757, 2112 |
| BssMI | GATC | 9 cut(s) | 454, 574, 1060, 1300, 1531, 1731, 1764, 1849, 2416 |
| BssNI | GRCGYC | 1 cut(s) | 813 |
| BssT1I | CCWWGG | 2 cut(s) | 294, 2112 |
| Bst2UI | CCWGG | 2 cut(s) | 559, 758 |
| Bst4CI | ACNGT | 1 cut(s) | 22 |
| Bst6I | CTCTTC | 2 cut(s) | 823, 1845 |
| BstACI | GRCGYC | 1 cut(s) | 813 |
| BstAFI | CTTAAG | 1 cut(s) | 839 |
| BstBAI | YACGTR | 1 cut(s) | 211 |
| BstBI | TTCGAA | 1 cut(s) | 168 |
| BstC8I | GCNNGC | 5 cut(s) | 71, 586, 1363, 2182, 2330 |
| BstDEI | CTNAG | 3 cut(s) | 725, 833, 2402 |
| BstDSI | CCRYGG | 1 cut(s) | 2112 |
| BstF5I | GGATG | 2 cut(s) | 1996, 2287 |
| BstHHI | GCGC | 3 cut(s) | 1225, 1428, 1860 |
| BstKTI | GATC | 9 cut(s) | 457, 577, 1063, 1303, 1534, 1734, 1767, 1852, 2419 |
| BstMAI | GTCTC | 5 cut(s) | 154, 820, 1414, 2103, 2405 |
| BstMBI | GATC | 9 cut(s) | 454, 574, 1060, 1300, 1531, 1731, 1764, 1849, 2416 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1351, 2380 |
| BstNI | CCWGG | 2 cut(s) | 559, 758 |
| BstNSI | RCATGY | 3 cut(s) | 918, 2332, 2345 |
| BstSCI | CCNGG | 2 cut(s) | 557, 756 |
| BstSFI | CTRYAG | 2 cut(s) | 399, 2146 |
| BstV1I | GCAGC | 7 cut(s) | 293, 327, 385, 498, 870, 1760, 1763 |
| BsuI | GTATCC | 1 cut(s) | 1828 |
| BsuRI | GGCC | 2 cut(s) | 1626, 2374 |
| BtgI | CCRYGG | 1 cut(s) | 2112 |
| BtsCI | GGATG | 2 cut(s) | 1996, 2287 |
| BtsI | GCAGTG | 1 cut(s) | 1368 |
| BtsIMutI | CAGTG | 2 cut(s) | 1264, 1368 |
| BveI | ACCTGC | 1 cut(s) | 1068 |
| Cac8I | GCNNGC | 5 cut(s) | 71, 586, 1363, 2182, 2330 |
| CaiI | CAGNNNCTG | 2 cut(s) | 864, 1423 |
| CciI | TCATGA | 1 cut(s) | 1147 |
| CfoI | GCGC | 3 cut(s) | 1225, 1428, 1860 |
| Cfr10I | RCCGGY | 2 cut(s) | 886, 2180 |
| Cfr13I | GGNCC | 2 cut(s) | 1254, 1625 |
| CseI | GACGC | 5 cut(s) | 802, 1354, 1768, 1893, 2338 |
| Csp6I | GTAC | 6 cut(s) | 27, 208, 701, 830, 986, 2107 |
| CspAI | ACCGGT | 1 cut(s) | 886 |
| CviQI | GTAC | 6 cut(s) | 27, 208, 701, 830, 986, 2107 |
| DdeI | CTNAG | 3 cut(s) | 725, 833, 2402 |
| DpnI | GATC | 9 cut(s) | 456, 576, 1062, 1302, 1533, 1733, 1766, 1851, 2418 |
| DpnII | GATC | 9 cut(s) | 454, 574, 1060, 1300, 1531, 1731, 1764, 1849, 2416 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2052 |
| Eam1104I | CTCTTC | 2 cut(s) | 823, 1845 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2052 |
| EarI | CTCTTC | 2 cut(s) | 823, 1845 |
| EciI | GGCGGA | 1 cut(s) | 2309 |
| Eco130I | CCWWGG | 2 cut(s) | 294, 2112 |
| Eco24I | GRGCYC | 1 cut(s) | 1920 |
| Eco47I | GGWCC | 1 cut(s) | 1254 |
| Eco57I | CTGAAG | 4 cut(s) | 117, 270, 1074, 2385 |
| Eco88I | CYCGRG | 3 cut(s) | 1607, 1690, 2102 |
| EcoRI | GAATTC | 1 cut(s) | 352 |
| EcoRII | CCWGG | 2 cut(s) | 557, 756 |
| EcoT14I | CCWWGG | 2 cut(s) | 294, 2112 |
| EcoT22I | ATGCAT | 2 cut(s) | 2330, 2334 |
| EcoT38I | GRGCYC | 1 cut(s) | 1920 |
| ErhI | CCWWGG | 2 cut(s) | 294, 2112 |
| Esp3I | CGTCTC | 2 cut(s) | 820, 2405 |
| FaqI | GGGAC | 2 cut(s) | 626, 2280 |
| FauI | CCCGC | 2 cut(s) | 1286, 2111 |
| FbaI | TGATCA | 1 cut(s) | 1060 |
| Fnu4HI | GCNGC | 8 cut(s) | 160, 282, 316, 399, 512, 859, 1774, 1777 |
| FokI | GGATG | 2 cut(s) | 2003, 2294 |
| FriOI | GRGCYC | 1 cut(s) | 1920 |
| Fsp4HI | GCNGC | 8 cut(s) | 160, 282, 316, 399, 512, 859, 1774, 1777 |
| FspBI | CTAG | 7 cut(s) | 483, 1316, 1683, 1881, 1911, 2057, 2196 |
| FspI | TGCGCA | 1 cut(s) | 1224 |
| GlaI | GCGC | 3 cut(s) | 1224, 1427, 1859 |
| GluI | GCNGC | 8 cut(s) | 160, 282, 316, 399, 512, 859, 1774, 1777 |
| GsaI | CCCAGC | 2 cut(s) | 159, 518 |
| GsuI | CTGGAG | 4 cut(s) | 350, 682, 1047, 1187 |
| HaeIII | GGCC | 2 cut(s) | 1626, 2374 |
| HapII | CCGG | 5 cut(s) | 534, 704, 887, 2181, 2384 |
| HgaI | GACGC | 5 cut(s) | 802, 1354, 1768, 1893, 2338 |
| HhaI | GCGC | 3 cut(s) | 1225, 1428, 1860 |
| Hin1I | GRCGYC | 1 cut(s) | 813 |
| Hin6I | GCGC | 3 cut(s) | 1223, 1426, 1858 |
| HinP1I | GCGC | 3 cut(s) | 1223, 1426, 1858 |
| HincII | GTYRAC | 2 cut(s) | 202, 366 |
| HindII | GTYRAC | 2 cut(s) | 202, 366 |
| HindIII | AAGCTT | 2 cut(s) | 842, 1828 |
| HpaI | GTTAAC | 1 cut(s) | 202 |
| HpaII | CCGG | 5 cut(s) | 534, 704, 887, 2181, 2384 |
| HphI | GGTGA | 1 cut(s) | 901 |
| Hpy166II | GTNNAC | 5 cut(s) | 202, 366, 548, 754, 1633 |
| Hpy188III | TCNNGA | 9 cut(s) | 329, 534, 1092, 1148, 1166, 1393, 1511, 1714, 2102 |
| Hpy8I | GTNNAC | 5 cut(s) | 202, 366, 548, 754, 1633 |
| HpyAV | CCTTC | 5 cut(s) | 1331, 1646, 1942, 1963, 2252 |
| HpyCH4III | ACNGT | 1 cut(s) | 22 |
| HpyCH4IV | ACGT | 3 cut(s) | 210, 615, 2388 |
| HpyCH4V | TGCA | 6 cut(s) | 401, 936, 1182, 1471, 2328, 2332 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1351, 2380 |
| HpyF3I | CTNAG | 3 cut(s) | 725, 833, 2402 |
| HpySE526I | ACGT | 3 cut(s) | 210, 615, 2388 |
| Hsp92I | GRCGYC | 1 cut(s) | 813 |
| HspAI | GCGC | 3 cut(s) | 1223, 1426, 1858 |
| Kpn2I | TCCGGA | 1 cut(s) | 533 |
| KpnI | GGTACC | 1 cut(s) | 704 |
| KroI | GCCGGC | 1 cut(s) | 2180 |
| KroNI | GCCGGC | 1 cut(s) | 2182 |
| Ksp22I | TGATCA | 1 cut(s) | 1060 |
| KspAI | GTTAAC | 1 cut(s) | 202 |
| Kzo9I | GATC | 9 cut(s) | 454, 574, 1060, 1300, 1531, 1731, 1764, 1849, 2416 |
| LmnI | GCTCC | 4 cut(s) | 331, 449, 1008, 1923 |
| Lsp1109I | GCAGC | 7 cut(s) | 293, 327, 385, 498, 870, 1760, 1763 |
| LweI | GCATC | 4 cut(s) | 94, 1181, 1713, 2315 |
| MaeI | CTAG | 7 cut(s) | 483, 1316, 1683, 1881, 1911, 2057, 2196 |
| MaeII | ACGT | 3 cut(s) | 210, 615, 2388 |
| MalI | GATC | 9 cut(s) | 456, 576, 1062, 1302, 1533, 1733, 1766, 1851, 2418 |
| MboI | GATC | 9 cut(s) | 454, 574, 1060, 1300, 1531, 1731, 1764, 1849, 2416 |
| MboII | GAAGA | 7 cut(s) | 172, 810, 1129, 1499, 1832, 2225, 2378 |
| MfeI | CAATTG | 1 cut(s) | 2085 |
| MhlI | GDGCHC | 2 cut(s) | 1410, 1920 |
| MlyI | GAGTC | 2 cut(s) | 844, 2062 |
| MmeI | TCCRAC | 2 cut(s) | 427, 1768 |
| Mph1103I | ATGCAT | 2 cut(s) | 2330, 2334 |
| MroI | TCCGGA | 1 cut(s) | 533 |
| MroNI | GCCGGC | 1 cut(s) | 2180 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1506 |
| MseI | TTAA | 6 cut(s) | 201, 642, 840, 873, 1230, 1466 |
| MslI | CAYNNNNRTG | 2 cut(s) | 90, 1485 |
| MspA1I | CMGCKG | 3 cut(s) | 398, 417, 584 |
| MspCI | CTTAAG | 1 cut(s) | 839 |
| MspI | CCGG | 5 cut(s) | 534, 704, 887, 2181, 2384 |
| MspR9I | CCNGG | 2 cut(s) | 559, 758 |
| MunI | CAATTG | 1 cut(s) | 2085 |
| Mva1269I | GAATGC | 1 cut(s) | 1579 |
| MvaI | CCWGG | 2 cut(s) | 559, 758 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1351, 2380 |
| NaeI | GCCGGC | 1 cut(s) | 2182 |
| NcoI | CCATGG | 1 cut(s) | 2112 |
| NdeII | GATC | 9 cut(s) | 454, 574, 1060, 1300, 1531, 1731, 1764, 1849, 2416 |
| NgoMIV | GCCGGC | 1 cut(s) | 2180 |
| NlaIV | GGNNCC | 4 cut(s) | 381, 702, 885, 1919 |
| NmeAIII | GCCGAG | 1 cut(s) | 1389 |
| NmuCI | GTSAC | 6 cut(s) | 78, 117, 485, 899, 1259, 1366 |
| NsbI | TGCGCA | 1 cut(s) | 1224 |
| NsiI | ATGCAT | 2 cut(s) | 2330, 2334 |
| NspI | RCATGY | 3 cut(s) | 918, 2332, 2345 |
| NspV | TTCGAA | 1 cut(s) | 168 |
| PaeI | GCATGC | 1 cut(s) | 2332 |
| PagI | TCATGA | 1 cut(s) | 1147 |
| PciI | ACATGT | 2 cut(s) | 914, 2341 |
| PctI | GAATGC | 1 cut(s) | 1579 |
| PdiI | GCCGGC | 1 cut(s) | 2182 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1506 |
| PflFI | GACNNNGTC | 1 cut(s) | 443 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 389, 584 |
| PinAI | ACCGGT | 1 cut(s) | 886 |
| PkrI | GCNGC | 8 cut(s) | 161, 283, 317, 400, 513, 860, 1775, 1778 |
| PleI | GAGTC | 2 cut(s) | 843, 2061 |
| PpsI | GAGTC | 2 cut(s) | 843, 2061 |
| Ppu21I | YACGTR | 1 cut(s) | 211 |
| PscI | ACATGT | 2 cut(s) | 914, 2341 |
| PshBI | ATTAAT | 1 cut(s) | 642 |
| Psp6I | CCWGG | 2 cut(s) | 557, 756 |
| PspFI | CCCAGC | 2 cut(s) | 155, 514 |
| PspGI | CCWGG | 2 cut(s) | 557, 756 |
| PspN4I | GGNNCC | 4 cut(s) | 381, 702, 885, 1919 |
| PspPI | GGNCC | 2 cut(s) | 1254, 1625 |
| PstI | CTGCAG | 1 cut(s) | 403 |
| PstNI | CAGNNNCTG | 2 cut(s) | 864, 1423 |
| PsyI | GACNNNGTC | 1 cut(s) | 443 |
| PvuII | CAGCTG | 2 cut(s) | 398, 584 |
| RsaI | GTAC | 6 cut(s) | 28, 209, 702, 831, 987, 2108 |
| RsaNI | GTAC | 6 cut(s) | 27, 208, 701, 830, 986, 2107 |
| RseI | CAYNNNNRTG | 2 cut(s) | 90, 1485 |
| SaqAI | TTAA | 6 cut(s) | 201, 642, 840, 873, 1230, 1466 |
| SatI | GCNGC | 8 cut(s) | 160, 282, 316, 399, 512, 859, 1774, 1777 |
| Sau3AI | GATC | 9 cut(s) | 454, 574, 1060, 1300, 1531, 1731, 1764, 1849, 2416 |
| Sau96I | GGNCC | 2 cut(s) | 1254, 1625 |
| ScaI | AGTACT | 1 cut(s) | 831 |
| SchI | GAGTC | 2 cut(s) | 844, 2062 |
| ScrFI | CCNGG | 2 cut(s) | 559, 758 |
| SduI | GDGCHC | 2 cut(s) | 1410, 1920 |
| SfaNI | GCATC | 4 cut(s) | 94, 1181, 1713, 2315 |
| SfcI | CTRYAG | 2 cut(s) | 399, 2146 |
| SfuI | TTCGAA | 1 cut(s) | 168 |
| SgrAI | CRCCGGYG | 1 cut(s) | 886 |
| SinI | GGWCC | 1 cut(s) | 1254 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 90, 1485 |
| SmlI | CTYRAG | 2 cut(s) | 839, 1393 |
| SmoI | CTYRAG | 2 cut(s) | 839, 1393 |
| SphI | GCATGC | 1 cut(s) | 2332 |
| SsiI | CCGC | 5 cut(s) | 160, 417, 1293, 2118, 2294 |
| SspI | AATATT | 2 cut(s) | 373, 1894 |
| SspMI | CTAG | 7 cut(s) | 483, 1316, 1683, 1881, 1911, 2057, 2196 |
| StyD4I | CCNGG | 2 cut(s) | 557, 756 |
| StyI | CCWWGG | 2 cut(s) | 294, 2112 |
| TaaI | ACNGT | 1 cut(s) | 22 |
| TaiI | ACGT | 3 cut(s) | 213, 618, 2391 |
| TaqI | TCGA | 6 cut(s) | 36, 168, 522, 650, 1158, 1848 |
| TatI | WGTACW | 1 cut(s) | 829 |
| TauI | GCSGC | 1 cut(s) | 162 |
| Tru1I | TTAA | 6 cut(s) | 201, 642, 840, 873, 1230, 1466 |
| Tru9I | TTAA | 6 cut(s) | 201, 642, 840, 873, 1230, 1466 |
| TscAI | CASTG | 2 cut(s) | 1264, 1375 |
| TseFI | GTSAC | 6 cut(s) | 78, 117, 485, 899, 1259, 1366 |
| TseI | GCWGC | 7 cut(s) | 281, 315, 398, 511, 858, 1773, 1776 |
| Tsp45I | GTSAC | 6 cut(s) | 78, 117, 485, 899, 1259, 1366 |
| TspGWI | ACGGA | 5 cut(s) | 105, 840, 1029, 2238, 2429 |
| TspRI | CASTG | 2 cut(s) | 1264, 1375 |
| Tth111I | GACNNNGTC | 1 cut(s) | 443 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 389, 584 |
| Vha464I | CTTAAG | 1 cut(s) | 839 |
| VpaK11BI | GGWCC | 1 cut(s) | 1254 |
| VspI | ATTAAT | 1 cut(s) | 642 |
| XapI | RAATTY | 3 cut(s) | 352, 421, 2010 |
| XceI | RCATGY | 3 cut(s) | 918, 2332, 2345 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1506 |
| XspI | CTAG | 7 cut(s) | 483, 1316, 1683, 1881, 1911, 2057, 2196 |
| ZrmI | AGTACT | 1 cut(s) | 831 |
| Zsp2I | ATGCAT | 2 cut(s) | 2330, 2334 |