FvH4_3g03502

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
1931602 .. 1934547
2946 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g03502.t1

Sequence Viewer

Length: 2031 bp
ATGGGAGCTGATTTGTGGGAGACTTTTGATAATCCTAGTGACTCACTTCTGCCAAGCATGTTGATGGGATATGATAGTGGTTCTGGAAAACGGAATTCCTTGACATCTTGGAAAAGTGAAAATGATCCATCACCGGGGATATTCTTAGCTGGACTGTCAACAGAGTTACCAGCACAAGTGTTCATTTGGATTAATGGATCTACTCCCCACTGGAGAAGTGGGCCATGGGATAAATCAAAGTTTATTGGTATATCTTCATCAAATACTAAGTATCTAAATCCATTCAATCTTGCTGATAATGTGTCACAGGGAAAAAGGTATTTGTCTTTCAGTTTTGACAAAATTCCTGGTGACAAAGTTCTTGGATATATCGACTTATCTTCAGAAGGTATACTGAGGTGGTTGTTTTCAGTAAGTGGGAAGAACTGGTATCTTCAGTTTAAGTCACTCACGAACCCATGTGACAATTATGGCGCATGTGGACCTTTTGGTGTTTGCAAAGCCTCTGGATCTCCAATCTGCAAGTGTTTGAAAGGGTTTATACCCAGGTCAAATGAGGAATGGAGCAAAAGAAACTGGACCGGAGGTTGTGTGAGACGAACAGCGTTGTCTTGTGAGACTAACGCAAATTTGTCAGTCTCATCAAAAGAAAACGATGGGTTTCTGAAGTTGGAAAAAATGAAAGTACCCGATTTACATGAATTTCTGGGTTCTTTGGCTCTAGACAAGTCCGAAGACTGCAAGATACAGTGCCAGAATAATTGTTCTTGCCAGGCTTATTCATATGTTGATAACATAGGGTGTTTGGTCTGGTCCAAACACCTTATTGATATGCAGCAGTTTCCATTTAATGGACAAGATCTTTATGTCCGCCTAGCACACTCAGAACTAGGTGAAGGAAAGCCGATCAAGTTAATTGTCAGCCTTACAACTATTGGATTTATGAGTATCTTGGTTGCCGTGGTCTTCAGATTGCTCAGGTGGCGTGCTAACAAAAAACGACGAGTTGAATTAAAAGCTCGGCGCTTGGAATCAACTAGTATGGTTAAGAATCATAGAGACGGTCTTCGAGAATATATAGGAAAACATGATCCCTCGGAGCTAAAGATATATGATTTTGATAGCATACTAATTGCCACAGACAACTTCAGCATCACAAACAAACTCGGGCAAGGAGGCTTTGGCCCAGTTTATAAGGGGATGCTTCCAGAAGGGAAGGAAATAGCAGTAAAAAGACTATCTAGTAGCTCAGGACAAGGTGTCGAAGAGTTCAAGAATGAGATGTTGTTGATCTCCAATCTTCAACACAAAAACCTTGTTAGGATGATGGGGTGCTGTGTTAAAGAGGATGAGAAGTTACTGATTTACGAGTTCATGCCTAATAAAAGCCTGGATACTTTTCTATTCGATTTGAAGAAGAGAGCAGTGCTTGATTGGAGCACGCGCTTTAATGTTATTCAGGGTATTGCTAGAGGGCTTCTTTATCTCCATCATGATTCCTATGTAAAGGTAATACATAGAGATTTAAAAGTCAGTAACATTCTCTTGGATGAGAAAATGAATCCAAAAATCTCAGATTTTGGATTGGCACGCATAGTTGAAGAAACTCAGAGTCTAGAAAATACTCAGAAGGTTGTTGGAACCCGTGGCTATATGTCTCCAGAGTATGCCATGGGTGGAATATTTTCCGAAAAGTCTGATGTCTACAGCTTCGGGGTCCTGGTATTAGAGATTATTAGTGGCAAGAAGAATACCAGCTTCTATTTATATGACCAACAGCTAGGCTTCCTTGCCTATGCATGGAATTTGTGGAATGAAGGCAGGCCATTGGAGTTGGTAGATGAAGACAATGCTGAGGATAGACCAACCATGGTGGATGTAGCTCTAATGCTAAGCAGCGAGAGAGATGGTCCAGAACCTAAGCTGCCTGTATTCACTATCAAAAATTCAGCTTATCATCCTCAACCACACTCTGAGAATACTATTTCCTCTAAAAATGAAGCTAGCATTACAACGATGGAAGGACGTTAA

Protein Analysis

677

Amino Acids

76.16

Weight (kDa)

7.81

Isoelectric Point (pI)

42.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 4 - 38 5.3e-06 D-mannose binding lectin
S_locus_glycop PF00954 71 - 183 9.9e-24 S-locus glycoprotein domain
PAN_2 PF08276 216 - 278 1.6e-15 PAN-like domain
Pkinase PF00069 384 - 583 6.2e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 385 - 583 2.2e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1194
AccB7I CCANNNNNTGG 1 cut(s) 851
AccI GTMKAC 2 cut(s) 391, 1704
AccII CGCG 1 cut(s) 1444
AciI CCGC 1 cut(s) 871
AclWI GGATC 4 cut(s) 119, 205, 517, 1085
AcsI RAATTY 6 cut(s) 94, 342, 628, 701, 1804, 1945
AcuI CTGAAG 5 cut(s) 366, 419, 686, 952, 1132
AfaI GTAC 1 cut(s) 687
AfiI CCNNNNNNNGG 3 cut(s) 134, 851, 1800
AgsI TTSAA 7 cut(s) 286, 532, 1010, 1273, 1304, 1414, 1601
AhdI GACNNNNNGTC 1 cut(s) 1259
AhlI ACTAGT 1 cut(s) 1037
AjnI CCWGG 5 cut(s) 346, 545, 771, 1389, 1719
Alw21I GWGCWC 1 cut(s) 1442
Alw26I GTCTC 6 cut(s) 14, 589, 611, 643, 1053, 1662
AlwI GGATC 4 cut(s) 119, 205, 517, 1085
Ama87I CYCGRG 1 cut(s) 1166
AoxI GGCC 3 cut(s) 221, 1183, 1823
ApeKI GCWGC 3 cut(s) 835, 1896, 1924
ApoI RAATTY 6 cut(s) 94, 342, 628, 701, 1804, 1945
AseI ATTAAT 1 cut(s) 192
Asp700I GAANNNNTTC 1 cut(s) 1684
AspLEI GCGC 3 cut(s) 476, 1026, 1446
AspS9I GGNCC 7 cut(s) 221, 482, 579, 813, 1184, 1717, 1910
AsuC2I CCSGG 1 cut(s) 135
AsuHPI GGTGA 3 cut(s) 123, 362, 905
AsuNHI GCTAGC 1 cut(s) 2003
AvaI CYCGRG 1 cut(s) 1166
AvaII GGWCC 5 cut(s) 482, 579, 813, 1717, 1910
BbsI GAAGAC 4 cut(s) 741, 958, 1058, 1851
Bbv12I GWGCWC 1 cut(s) 1442
BbvCI CCTCAGC 1 cut(s) 1854
BbvI GCAGC 3 cut(s) 847, 1908, 1911
BccI CCATC 7 cut(s) 58, 136, 650, 1321, 1497, 1901, 2011
BceAI ACGGC 1 cut(s) 944
BciT130I CCWGG 5 cut(s) 348, 547, 773, 1391, 1721
BciVI GTATCC 1 cut(s) 1387
BcnI CCSGG 1 cut(s) 135
BcoDI GTCTC 6 cut(s) 14, 589, 611, 643, 1053, 1662
BcuI ACTAGT 1 cut(s) 1037
BfmI CTRYAG 1 cut(s) 1705
BfoI RGCGCY 1 cut(s) 1027
BfuI GTATCC 1 cut(s) 1387
BglII AGATCT 1 cut(s) 859
BisI GCNGC 3 cut(s) 836, 1897, 1925
BlpI GCTNAGC 1 cut(s) 1892
BlsI GCNGC 3 cut(s) 837, 1898, 1926
Bme1390I CCNGG 6 cut(s) 135, 348, 547, 773, 1391, 1721
Bme18I GGWCC 5 cut(s) 482, 579, 813, 1717, 1910
BmeRI GACNNNNNGTC 1 cut(s) 1259
BmeT110I CYCGRG 1 cut(s) 1166
BmgT120I GGNCC 7 cut(s) 221, 482, 579, 813, 1184, 1717, 1910
BmiI GGNNCC 2 cut(s) 1642, 1718
BmrFI CCNGG 6 cut(s) 135, 348, 547, 773, 1391, 1721
BmrI ACTGGG 1 cut(s) 1181
BmsI GCATC 2 cut(s) 1161, 1191
BmtI GCTAGC 1 cut(s) 2007
BmuI ACTGGG 1 cut(s) 1181
BpiI GAAGAC 4 cut(s) 741, 958, 1058, 1851
BpmI CTGGAG 2 cut(s) 232, 1644
Bpu10I CCTNAGC 4 cut(s) 977, 1249, 1854, 1920
Bpu1102I GCTNAGC 1 cut(s) 1892
BpuMI CCSGG 1 cut(s) 135
BsaJI CCNNGG 8 cut(s) 134, 224, 545, 960, 1095, 1645, 1671, 1869
BsaWI WCCGGW 1 cut(s) 581
BsaXI ACNNNNNCTCC 2 cut(s) 576, 606
Bsc4I CCNNNNNNNGG 3 cut(s) 134, 851, 1800
Bse1I ACTGG 4 cut(s) 215, 431, 581, 1187
BseBI CCWGG 5 cut(s) 348, 547, 773, 1391, 1721
BseDI CCNNGG 8 cut(s) 134, 224, 545, 960, 1095, 1645, 1671, 1869
BseGI GGATG 6 cut(s) 1206, 1329, 1354, 1555, 1882, 1957
BseLI CCNNNNNNNGG 3 cut(s) 134, 851, 1800
BseMII CTCAG 9 cut(s) 386, 897, 991, 1263, 1587, 1622, 1640, 1845, 1965
BseNI ACTGG 4 cut(s) 215, 431, 581, 1187
BseXI GCAGC 3 cut(s) 847, 1908, 1911
Bsh1236I CGCG 1 cut(s) 1444
BshFI GGCC 3 cut(s) 223, 1185, 1825
BsiHKAI GWGCWC 1 cut(s) 1442
BsiHKCI CYCGRG 1 cut(s) 1166
BsiSI CCGG 2 cut(s) 134, 582
BslI CCNNNNNNNGG 3 cut(s) 134, 851, 1800
BsmAI GTCTC 6 cut(s) 14, 589, 611, 643, 1053, 1662
BsmBI CGTCTC 2 cut(s) 589, 1053
BsnI GGCC 3 cut(s) 223, 1185, 1825
BsoBI CYCGRG 1 cut(s) 1166
Bsp1286I GDGCHC 1 cut(s) 1442
Bsp143I GATC 7 cut(s) 124, 197, 509, 859, 906, 1090, 1290
Bsp1720I GCTNAGC 1 cut(s) 1892
Bsp19I CCATGG 3 cut(s) 224, 1671, 1869
BspACI CCGC 1 cut(s) 871
BspANI GGCC 3 cut(s) 223, 1185, 1825
BspCNI CTCAG 9 cut(s) 387, 896, 990, 1262, 1586, 1621, 1639, 1846, 1966
BspFNI CGCG 1 cut(s) 1444
BspHI TCATGA 1 cut(s) 1492
BspLI GGNNCC 2 cut(s) 1642, 1718
BspOI GCTAGC 1 cut(s) 2007
BspPI GGATC 4 cut(s) 119, 205, 517, 1085
BsrI ACTGG 4 cut(s) 215, 431, 581, 1187
BssECI CCNNGG 8 cut(s) 134, 224, 545, 960, 1095, 1645, 1671, 1869
BssMI GATC 7 cut(s) 124, 197, 509, 859, 906, 1090, 1290
BssNAI GTATAC 1 cut(s) 392
BssT1I CCWWGG 3 cut(s) 224, 1671, 1869
Bst1107I GTATAC 1 cut(s) 392
Bst2UI CCWGG 5 cut(s) 348, 547, 773, 1391, 1721
Bst4CI ACNGT 3 cut(s) 156, 750, 1064
Bst6I CTCTTC 2 cut(s) 1260, 1412
BstC8I GCNNGC 5 cut(s) 987, 1442, 1591, 1823, 2005
BstDSI CCRYGG 5 cut(s) 224, 960, 1645, 1671, 1869
BstF5I GGATG 6 cut(s) 1206, 1329, 1354, 1555, 1882, 1957
BstFNI CGCG 1 cut(s) 1444
BstH2I RGCGCY 1 cut(s) 1027
BstHHI GCGC 3 cut(s) 476, 1026, 1446
BstKTI GATC 7 cut(s) 127, 200, 512, 862, 909, 1093, 1293
BstMAI GTCTC 6 cut(s) 14, 589, 611, 643, 1053, 1662
BstMBI GATC 7 cut(s) 124, 197, 509, 859, 906, 1090, 1290
BstMWI GCNNNNNNNGC 1 cut(s) 982
BstNI CCWGG 5 cut(s) 348, 547, 773, 1391, 1721
BstNSI RCATGY 2 cut(s) 61, 480
BstSCI CCNGG 6 cut(s) 133, 346, 545, 771, 1389, 1719
BstSFI CTRYAG 1 cut(s) 1705
BstUI CGCG 1 cut(s) 1444
BstV1I GCAGC 3 cut(s) 847, 1908, 1911
BstV2I GAAGAC 4 cut(s) 741, 958, 1058, 1851
BstX2I RGATCY 3 cut(s) 197, 509, 859
BstYI RGATCY 3 cut(s) 197, 509, 859
BstZ17I GTATAC 1 cut(s) 392
BsuI GTATCC 1 cut(s) 1387
BsuRI GGCC 3 cut(s) 223, 1185, 1825
BtgI CCRYGG 5 cut(s) 224, 960, 1645, 1671, 1869
BtsCI GGATG 6 cut(s) 1206, 1329, 1354, 1555, 1882, 1957
BtsI GCAGTG 1 cut(s) 1431
BtsIMutI CAGTG 3 cut(s) 208, 755, 1431
Cac8I GCNNGC 5 cut(s) 987, 1442, 1591, 1823, 2005
CciI TCATGA 1 cut(s) 1492
CfoI GCGC 3 cut(s) 476, 1026, 1446
Cfr13I GGNCC 7 cut(s) 221, 482, 579, 813, 1184, 1717, 1910
Csp6I GTAC 1 cut(s) 686
CspCI CAANNNNNGTGG 2 cut(s) 1854, 1889
CviQI GTAC 1 cut(s) 686
DpnI GATC 7 cut(s) 126, 199, 511, 861, 908, 1092, 1292
DpnII GATC 7 cut(s) 124, 197, 509, 859, 906, 1090, 1290
DraI TTTAAA 1 cut(s) 1527
DriI GACNNNNNGTC 1 cut(s) 1259
Eam1104I CTCTTC 2 cut(s) 1260, 1412
Eam1105I GACNNNNNGTC 1 cut(s) 1259
EarI CTCTTC 2 cut(s) 1260, 1412
EciI GGCGGA 1 cut(s) 860
Eco130I CCWWGG 3 cut(s) 224, 1671, 1869
Eco47I GGWCC 5 cut(s) 482, 579, 813, 1717, 1910
Eco57I CTGAAG 5 cut(s) 366, 419, 686, 952, 1132
Eco88I CYCGRG 1 cut(s) 1166
EcoO109I RGGNCCY 1 cut(s) 1717
EcoRI GAATTC 1 cut(s) 94
EcoRII CCWGG 5 cut(s) 346, 545, 771, 1389, 1719
EcoT14I CCWWGG 3 cut(s) 224, 1671, 1869
EcoT22I ATGCAT 1 cut(s) 1801
ErhI CCWWGG 3 cut(s) 224, 1671, 1869
Esp3I CGTCTC 2 cut(s) 589, 1053
FauNDI CATATG 1 cut(s) 784
FblI GTMKAC 2 cut(s) 391, 1704
Fnu4HI GCNGC 3 cut(s) 836, 1897, 1925
FokI GGATG 6 cut(s) 1213, 1336, 1361, 1562, 1889, 1944
Fsp4HI GCNGC 3 cut(s) 836, 1897, 1925
GlaI GCGC 3 cut(s) 475, 1025, 1445
GluI GCNGC 3 cut(s) 836, 1897, 1925
GsuI CTGGAG 2 cut(s) 232, 1644
HaeII RGCGCY 1 cut(s) 1027
HaeIII GGCC 3 cut(s) 223, 1185, 1825
HapII CCGG 2 cut(s) 134, 582
HhaI GCGC 3 cut(s) 476, 1026, 1446
Hin6I GCGC 3 cut(s) 474, 1024, 1444
HinP1I GCGC 3 cut(s) 474, 1024, 1444
HincII GTYRAC 1 cut(s) 159
HindII GTYRAC 1 cut(s) 159
HinfI GANTC 6 cut(s) 41, 1031, 1051, 1496, 1561, 1612
HpaII CCGG 2 cut(s) 134, 582
HphI GGTGA 3 cut(s) 123, 362, 905
Hpy166II GTNNAC 4 cut(s) 159, 392, 482, 1705
Hpy8I GTNNAC 4 cut(s) 159, 392, 482, 1705
Hpy99I CGWCG 1 cut(s) 1005
HpyAV CCTTC 7 cut(s) 380, 890, 1205, 1210, 1624, 1811, 2015
HpyCH4III ACNGT 3 cut(s) 156, 750, 1064
HpyCH4IV ACGT 1 cut(s) 2026
HpyCH4V TGCA 5 cut(s) 498, 522, 741, 835, 1799
HpyF10VI GCNNNNNNNGC 1 cut(s) 982
HpySE526I ACGT 1 cut(s) 2026
HspAI GCGC 3 cut(s) 474, 1024, 1444
Kzo9I GATC 7 cut(s) 124, 197, 509, 859, 906, 1090, 1290
LmnI GCTCC 4 cut(s) 5, 564, 1099, 1437
Lsp1109I GCAGC 3 cut(s) 847, 1908, 1911
LweI GCATC 2 cut(s) 1161, 1191
MaeII ACGT 1 cut(s) 2026
MaeIII GTNAC 8 cut(s) 38, 165, 303, 350, 444, 461, 1356, 1535
MalI GATC 7 cut(s) 126, 199, 511, 861, 908, 1092, 1292
MboI GATC 7 cut(s) 124, 197, 509, 859, 906, 1090, 1290
MflI RGATCY 3 cut(s) 197, 509, 859
MhlI GDGCHC 1 cut(s) 1442
MlyI GAGTC 2 cut(s) 35, 1621
MmeI TCCRAC 2 cut(s) 651, 1618
Mph1103I ATGCAT 1 cut(s) 1801
MroXI GAANNNNTTC 1 cut(s) 1684
MslI CAYNNNNRTG 1 cut(s) 62
MspI CCGG 2 cut(s) 134, 582
MspR9I CCNGG 6 cut(s) 135, 348, 547, 773, 1391, 1721
MvaI CCWGG 5 cut(s) 348, 547, 773, 1391, 1721
MvnI CGCG 1 cut(s) 1444
MwoI GCNNNNNNNGC 1 cut(s) 982
NciI CCSGG 1 cut(s) 135
NcoI CCATGG 3 cut(s) 224, 1671, 1869
NdeI CATATG 1 cut(s) 784
NdeII GATC 7 cut(s) 124, 197, 509, 859, 906, 1090, 1290
NheI GCTAGC 1 cut(s) 2003
NlaIV GGNNCC 2 cut(s) 1642, 1718
NmeAIII GCCGAG 1 cut(s) 1000
NmuCI GTSAC 5 cut(s) 38, 303, 350, 444, 461
NsiI ATGCAT 1 cut(s) 1801
NspI RCATGY 2 cut(s) 61, 480
PagI TCATGA 1 cut(s) 1492
PdmI GAANNNNTTC 1 cut(s) 1684
PfeI GAWTC 4 cut(s) 1031, 1051, 1496, 1561
PflMI CCANNNNNTGG 1 cut(s) 851
PkrI GCNGC 3 cut(s) 837, 1898, 1926
PleI GAGTC 2 cut(s) 35, 1620
PpsI GAGTC 2 cut(s) 35, 1620
PpuMI RGGWCCY 1 cut(s) 1717
PshBI ATTAAT 1 cut(s) 192
PsiI TTATAA 1 cut(s) 1194
Psp5II RGGWCCY 1 cut(s) 1717
Psp6I CCWGG 5 cut(s) 346, 545, 771, 1389, 1719
PspGI CCWGG 5 cut(s) 346, 545, 771, 1389, 1719
PspN4I GGNNCC 2 cut(s) 1642, 1718
PspPI GGNCC 7 cut(s) 221, 482, 579, 813, 1184, 1717, 1910
PspPPI RGGWCCY 1 cut(s) 1717
PsuI RGATCY 3 cut(s) 197, 509, 859
RsaI GTAC 1 cut(s) 687
RsaNI GTAC 1 cut(s) 686
RseI CAYNNNNRTG 1 cut(s) 62
SatI GCNGC 3 cut(s) 836, 1897, 1925
Sau3AI GATC 7 cut(s) 124, 197, 509, 859, 906, 1090, 1290
Sau96I GGNCC 7 cut(s) 221, 482, 579, 813, 1184, 1717, 1910
SchI GAGTC 2 cut(s) 35, 1621
ScrFI CCNGG 6 cut(s) 135, 348, 547, 773, 1391, 1721
SduI GDGCHC 1 cut(s) 1442
SfaNI GCATC 2 cut(s) 1161, 1191
SfcI CTRYAG 1 cut(s) 1705
SinI GGWCC 5 cut(s) 482, 579, 813, 1717, 1910
SmiMI CAYNNNNRTG 1 cut(s) 62
SpeI ACTAGT 1 cut(s) 1037
SsiI CCGC 1 cut(s) 871
SspI AATATT 1 cut(s) 1683
StyD4I CCNGG 6 cut(s) 133, 346, 545, 771, 1389, 1719
StyI CCWWGG 3 cut(s) 224, 1671, 1869
TaaI ACNGT 3 cut(s) 156, 750, 1064
TaiI ACGT 1 cut(s) 2029
TaqI TCGA 4 cut(s) 372, 1069, 1263, 1407
TfiI GAWTC 4 cut(s) 1031, 1051, 1496, 1561
TscAI CASTG 3 cut(s) 215, 755, 1431
TseFI GTSAC 5 cut(s) 38, 303, 350, 444, 461
TseI GCWGC 3 cut(s) 835, 1896, 1924
Tsp45I GTSAC 5 cut(s) 38, 303, 350, 444, 461
TspGWI ACGGA 1 cut(s) 106
TspRI CASTG 3 cut(s) 215, 755, 1431
Van91I CCANNNNNTGG 1 cut(s) 851
VpaK11BI GGWCC 5 cut(s) 482, 579, 813, 1717, 1910
VspI ATTAAT 1 cut(s) 192
XapI RAATTY 6 cut(s) 94, 342, 628, 701, 1804, 1945
XbaI TCTAGA 2 cut(s) 721, 1615
XceI RCATGY 2 cut(s) 61, 480
XcmI CCANNNNNNNNNTGG 1 cut(s) 215
XmiI GTMKAC 2 cut(s) 391, 1704
XmnI GAANNNNTTC 1 cut(s) 1684
Zsp2I ATGCAT 1 cut(s) 1801
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.