MD05G1330400.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
45484901 .. 45485740
840 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1330400.v1.1.491

Sequence Viewer

Length: 558 bp
ATGAAAGGAAAAACAAAGTTAATGCAGTTGAATCATACAAGTGATCATTCAGGTGACAATCTTCAAGAATACATAAGAAAACATGATCCGTCGGAGCTATTCATCTACGACTTTGACAGCATATTAACTGCTACAAACAATTTCAGCACCACGAACAAACTCGGGGAAGGAGGTTTCGGCCCTGTTTACAAGGGTAAGCTACAAGAAGGGAAGGAAACAGCCGTAAAAAGACTATCCAGTAGCTCGGGGCAAGGCATGGAGGAGTTCAAGAATGAGATGCTGTTGATCTCCAAACTCCAACACAAGAATCTTGTTAGGATCATGGGCTGCTGCGTCAAAGACGATGAAAAGTTACTGATTTATGAATTCATGCCGAACAAAAGCTTGGATACTCTTCTATTTGATCCTAAGTGCAGAGAAGAGCTTGATTGGGCTACACGCTTCAATATTATCCAGGGAGTTGCTAGAGGATTTCTTTACCTCCACCACGATTCCTGTTTGAAGGTAATCCATAGAGATTTGAAGGTTAGAAACATTCTCCTAGATGAGAATATGTGA

Protein Analysis

186

Amino Acids

21.3

Weight (kDa)

7.05

Isoelectric Point (pI)

36.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 49 - 184 5.9e-25 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 50 - 184 2.5e-28 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 3 cut(s) 80, 326, 398
AcsI RAATTY 1 cut(s) 365
AgsI TTSAA 6 cut(s) 31, 65, 268, 445, 502, 523
AjnI CCWGG 1 cut(s) 453
AjuI GAANNNNNNNTTGG 2 cut(s) 368, 400
AluBI AGCT 5 cut(s) 97, 199, 243, 384, 424
AluI AGCT 5 cut(s) 97, 199, 243, 384, 424
AlwI GGATC 3 cut(s) 80, 326, 398
Ama87I CYCGRG 2 cut(s) 161, 244
AoxI GGCC 1 cut(s) 178
ApeKI GCWGC 2 cut(s) 327, 330
ApoI RAATTY 1 cut(s) 365
AspS9I GGNCC 1 cut(s) 179
AsuHPI GGTGA 1 cut(s) 65
AvaI CYCGRG 2 cut(s) 161, 244
BbvI GCAGC 2 cut(s) 314, 317
BceAI ACGGC 1 cut(s) 206
BciT130I CCWGG 1 cut(s) 455
BciVI GTATCC 1 cut(s) 382
BclI TGATCA 1 cut(s) 43
BfaI CTAG 2 cut(s) 465, 542
BfuI GTATCC 1 cut(s) 382
BisI GCNGC 2 cut(s) 328, 331
BlsI GCNGC 2 cut(s) 329, 332
Bme1390I CCNGG 1 cut(s) 455
BmeT110I CYCGRG 2 cut(s) 161, 244
BmgT120I GGNCC 1 cut(s) 179
BmrFI CCNGG 1 cut(s) 455
BmsI GCATC 1 cut(s) 267
BsaJI CCNNGG 1 cut(s) 454
Bse1I ACTGG 1 cut(s) 237
BseBI CCWGG 1 cut(s) 455
BseDI CCNNGG 1 cut(s) 454
BseNI ACTGG 1 cut(s) 237
BseRI GAGGAG 1 cut(s) 275
BseXI GCAGC 2 cut(s) 314, 317
BsgI GTGCAG 1 cut(s) 433
BshFI GGCC 1 cut(s) 180
BsiHKCI CYCGRG 2 cut(s) 161, 244
BsnI GGCC 1 cut(s) 180
BsoBI CYCGRG 2 cut(s) 161, 244
Bsp143I GATC 5 cut(s) 43, 85, 285, 318, 403
BspANI GGCC 1 cut(s) 180
BspPI GGATC 3 cut(s) 80, 326, 398
BspQI GCTCTTC 1 cut(s) 414
BsrI ACTGG 1 cut(s) 237
BssECI CCNNGG 1 cut(s) 454
BssMI GATC 5 cut(s) 43, 85, 285, 318, 403
Bst2UI CCWGG 1 cut(s) 455
Bst6I CTCTTC 2 cut(s) 399, 414
BstDEI CTNAG 1 cut(s) 408
BstKTI GATC 5 cut(s) 46, 88, 288, 321, 406
BstMBI GATC 5 cut(s) 43, 85, 285, 318, 403
BstNI CCWGG 1 cut(s) 455
BstSCI CCNGG 1 cut(s) 453
BstV1I GCAGC 2 cut(s) 314, 317
BsuI GTATCC 1 cut(s) 382
BsuRI GGCC 1 cut(s) 180
Cfr13I GGNCC 1 cut(s) 179
CseI GACGC 1 cut(s) 322
CviAII CATG 4 cut(s) 83, 256, 322, 370
CviJI RGCY 9 cut(s) 97, 180, 199, 221, 243, 327, 384, 424, 434
CviKI_1 RGCY 9 cut(s) 97, 180, 199, 221, 243, 327, 384, 424, 434
DdeI CTNAG 1 cut(s) 408
DpnI GATC 5 cut(s) 45, 87, 287, 320, 405
DpnII GATC 5 cut(s) 43, 85, 285, 318, 403
Eam1104I CTCTTC 2 cut(s) 399, 414
EarI CTCTTC 2 cut(s) 399, 414
Eco88I CYCGRG 2 cut(s) 161, 244
EcoRI GAATTC 1 cut(s) 365
EcoRII CCWGG 1 cut(s) 453
FaeI CATG 4 cut(s) 86, 259, 325, 373
FatI CATG 4 cut(s) 82, 255, 321, 369
FbaI TGATCA 1 cut(s) 43
Fnu4HI GCNGC 2 cut(s) 328, 331
Fsp4HI GCNGC 2 cut(s) 328, 331
FspBI CTAG 2 cut(s) 465, 542
GluI GCNGC 2 cut(s) 328, 331
HaeIII GGCC 1 cut(s) 180
HgaI GACGC 1 cut(s) 322
Hin1II CATG 4 cut(s) 86, 259, 325, 373
HindIII AAGCTT 1 cut(s) 382
HinfI GANTC 3 cut(s) 31, 307, 491
HphI GGTGA 1 cut(s) 65
Hpy166II GTNNAC 1 cut(s) 187
Hpy188I TCNGA 1 cut(s) 94
Hpy188III TCNNGA 2 cut(s) 65, 268
Hpy8I GTNNAC 1 cut(s) 187
Hpy99I CGWCG 1 cut(s) 94
HpyAV CCTTC 5 cut(s) 161, 200, 205, 496, 517
HpyCH4V TGCA 2 cut(s) 25, 414
HpyF3I CTNAG 1 cut(s) 408
Hsp92II CATG 4 cut(s) 86, 259, 325, 373
Ksp22I TGATCA 1 cut(s) 43
Kzo9I GATC 5 cut(s) 43, 85, 285, 318, 403
LguI GCTCTTC 1 cut(s) 414
LmnI GCTCC 1 cut(s) 94
LpnPI CCDG 6 cut(s) 36, 195, 250, 440, 467, 508
Lsp1109I GCAGC 2 cut(s) 314, 317
LweI GCATC 1 cut(s) 267
MaeI CTAG 2 cut(s) 465, 542
MaeIII GTNAC 2 cut(s) 53, 351
MalI GATC 5 cut(s) 45, 87, 287, 320, 405
MboI GATC 5 cut(s) 43, 85, 285, 318, 403
MboII GAAGA 3 cut(s) 53, 386, 431
MluCI AATT 2 cut(s) 139, 365
MmeI TCCRAC 2 cut(s) 72, 322
MnlI CCTC 4 cut(s) 164, 253, 461, 491
MseI TTAA 2 cut(s) 20, 125
MslI CAYNNNNRTG 2 cut(s) 39, 51
MspR9I CCNGG 1 cut(s) 455
MvaI CCWGG 1 cut(s) 455
NdeII GATC 5 cut(s) 43, 85, 285, 318, 403
NlaIII CATG 4 cut(s) 86, 259, 325, 373
NmuCI GTSAC 1 cut(s) 53
PciSI GCTCTTC 1 cut(s) 414
PfeI GAWTC 3 cut(s) 31, 307, 491
PkrI GCNGC 2 cut(s) 329, 332
Psp6I CCWGG 1 cut(s) 453
PspGI CCWGG 1 cut(s) 453
PspPI GGNCC 1 cut(s) 179
RseI CAYNNNNRTG 2 cut(s) 39, 51
SapI GCTCTTC 1 cut(s) 414
SaqAI TTAA 2 cut(s) 20, 125
SatI GCNGC 2 cut(s) 328, 331
Sau3AI GATC 5 cut(s) 43, 85, 285, 318, 403
Sau96I GGNCC 1 cut(s) 179
ScrFI CCNGG 1 cut(s) 455
SfaNI GCATC 1 cut(s) 267
SmiMI CAYNNNNRTG 2 cut(s) 39, 51
Sse9I AATT 2 cut(s) 139, 365
SspI AATATT 1 cut(s) 448
SspMI CTAG 2 cut(s) 465, 542
StyD4I CCNGG 1 cut(s) 453
TasI AATT 2 cut(s) 139, 365
TfiI GAWTC 3 cut(s) 31, 307, 491
Tru1I TTAA 2 cut(s) 20, 125
Tru9I TTAA 2 cut(s) 20, 125
TseFI GTSAC 1 cut(s) 53
TseI GCWGC 2 cut(s) 327, 330
Tsp45I GTSAC 1 cut(s) 53
TspDTI ATGAA 5 cut(s) 17, 91, 358, 360, 378
TspGWI ACGGA 1 cut(s) 78
XapI RAATTY 1 cut(s) 365
XspI CTAG 2 cut(s) 465, 542
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.