Rroxscaffold_1G00070210

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000033
Physical Location & Seq
Forward (+)
91031786 .. 91035615
3830 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00070210.1

Sequence Viewer

Length: 2526 bp
ATGGCTATTAGAACTGAAAATGTTGGTGCTTTTAATTCCCCCTTGTTCTTGCTGTTCTTGTTCATCTTGTTTCCATCAGAAAATTGTTTTGCTCAAGTTTATAACATAACTCATTCACAACCATTATCACAGGGACAAACTCTAGTTTCCCCTGGCCATATTTTTGAAATGGGCTTCTTCAGTCCTAACAATTCTGATAAGTGGTATGTGGGGTTATGGCACAAAAATATATTTCCCCGTAAAGTTGTATGGGTGGCCAACAGAGGAACGCCTCTTAGAGGTACAGACATCTCTGCTACTTTCAGAATTAGCAGCAATGGGAATCTGGAGCTTATAAATGGTCAGCGTCGAGTCTTCGTAATCAATACTTCTGTGTCATCCAATGGTTCAGCTGCAGTTCTTCTAGACAATGGAAATTTTGTTGTCAAAGATGATAATGGAGCTGAGTTATGGGGGAGTTTTGATTTTCCTACTGACACAATCCTACCAAGTATGCCGCTACTCTTTGATAGTAAGTCTGGAAAAAGCAATTTATTGAGTGCCTGGAAAAGTTATAACGATCCATCAACTGGGATATACTCGGTTGGACTGTCAGCACAGACGCCATCACAGGTGTTCATTTGGATCAATGGATCAACTCCCCACTGGAGAAGTGGGCCATGGGATAAATCAAAGTTCATTGGTGTACCAGAAATGAATGCTCAATATCTAAGTGGGTTCACTTTAGATGATAGTGCTCAACATATCACATATAGTAGTTACAACATTTCCGCATATGTGGAAATCTCTTCACAAGGTTCAATAAAGCTTATGTCCTCGCAAGATGGAAAGAGCTGGAATCTTACCTTGGAGTTACCAAAGAATCCATGTGACATGTATGGAGCATGTGGACCTTTTGGGGTTTGCAAAGCTTCTGAATCTCAAATCTGCGAGTGTTTGAAAGGGTTTGTACCGAAGTCAGACAAGGAATGGAGCAACGGAAACAGGAGAGGAGGGTGTGTGAGGAAAACCAAATTATTTTGTGAGAGATACGCTGATAAGTCAGTCTCATCAAGTGGAAAAGAAAATGATAATGATGGGTTTTGGAGGATGGTAAGGTTAAAAGTACCAGATTTTCATGAGTATATTAGTTCCTTCGATGCTCCAGACACATCCGAAGACTGCAAGAAACGGTGCCTACATAATTGTTCTTGCCAGGCTTATGCATTTGTTAGTAGTGTAGGGTGTTTGATCTGGTCTACAGATCTTATTGATATACAGGAGTTTTCCTCCAGCGGAGCGGATCTTTTTATCCGCCTAGCACATGTAGAACTAGGTGCAGGGAAGCCAATAAACTTAATTGTCAGCCTCACAGCTTTCTGTTTTATCATTATGCTGGGTGCCATAGTGTTTGGTTTGCACAGGTCGCAAGCTAACCAAAAGGAAACAGGAAACGAAAAAGTAAAAACTCAACGTTTTGGACTGAACAACACGATTCAAATTTCAAGAAACACTCTCCGAGAGTATTTAGGAAAATATGATCCATCAGAGTTTGTGATCTATGATTTTGACAGCATATTAATTGCCACAAACAATTTTAGCCTCACAAACAAACTAGGCCAAGGAGGCTTTGGTCCAGTATATAGGGGTAAGCTACAAGAAGGGGAGGAGATAGCAGTGAAAAGACTATCCAGTAGCTCAGGCCAAGGATTAGAAGAGTTCAAAAATGAGGTGTTGTTGATCTCCAATCTCCAGCATAAAAATCTTGTTAGAATTATGGGATGCTGCATTAAACAGGATGAGAAGTTACTCATTTATGAGTTCATGCCAAACAAAAGCTTGGATACTTTTCTATTTGATCCCATGAGAAGAGCAGTGCTTGATTGGGCAACACGCTTTAATATTATTCAGGGTGTTGCTAGAGGCCTTCTTTATCTCCATCATGATTCCTGTTTGAAGATAATACACAGAGATCTTAAAGTCAGCAACATTCTCTTGGATGAGAAAATGAACGCCAAAATTTCAGATTTTGGATTGGCACGCATAGTTGAAGGAGCAGAAAATCTAGAAAAGACTCAGAAGGTTGTGGGAACGCGTGGCTATATGTCTCCGGAGTATGCCATGGGTGGAATATTTTCTGAAAAATCTGATGTGTATAGCTTCGGGGTCTTGGTATTAGAGGTTATTAGCAGCAAGAAGAATACCAACTTCTGTATCCATGACCAACAGCTAGGCTTTCTACCCTATGCATGGAACTTGTGGAATGAAGGCAGGGGATTGGAGTTGGCAGATGAAGTGTTGGATGATTCATATTCCTCATCTGAAGTAATAAGATGCCTTCATATTGGGCTTCTTTGTGTACAGGACAATGCAGTGGATAGACCAACTATGCCTAATGTCGTTTTCATGCTTAATAGTGAGACAGCTTGTCCACAGCCTAAGCAGCCTATATTCATTCTCCAAACCTCACTCTCTCGACCTCAACCACAGTTTGTGAATATTTGTTCTGCAAATGAAGCTACCATGACAGAGATGGAAGGACGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

841

Amino Acids

93.93

Weight (kDa)

6.25

Isoelectric Point (pI)

42.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 82 - 183 3.2e-25 D-mannose binding lectin
S_locus_glycop PF00954 216 - 320 4.4e-29 S-locus glycoprotein domain
PAN_2 PF08276 356 - 419 8.2e-17 PAN-like domain
Pkinase PF00069 527 - 726 7.1e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 528 - 727 1.4e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 102, 335, 555
AccB1I GGYRCC 2 cut(s) 1173, 1379
AccB7I CCANNNNNTGG 1 cut(s) 569
AccBSI CCGCTC 1 cut(s) 1280
AccI GTMKAC 1 cut(s) 1238
AccII CGCG 1 cut(s) 2074
AccIII TCCGGA 1 cut(s) 2089
AciI CCGC 5 cut(s) 497, 771, 1275, 1280, 1294
AclI AACGTT 1 cut(s) 1453
AclWI GGATC 6 cut(s) 554, 632, 640, 1290, 1514, 1832
AcoI YGGCCR 2 cut(s) 154, 255
AcsI RAATTY 3 cut(s) 415, 1479, 1998
AcuI CTGAAG 2 cut(s) 163, 2322
AcyI GRCGYC 1 cut(s) 602
AfaI GTAC 5 cut(s) 283, 687, 951, 1107, 2340
AfiI CCNNNNNNNGG 3 cut(s) 278, 569, 2229
AflIII ACRYGT 3 cut(s) 873, 1303, 2072
AgsI TTSAA 8 cut(s) 167, 801, 940, 1478, 1485, 1702, 1936, 2030
AhdI GACNNNNNGTC 1 cut(s) 2406
AjnI CCWGG 3 cut(s) 151, 542, 1194
AjuI GAANNNNNNNTTGG 2 cut(s) 830, 862
Alw21I GWGCWC 1 cut(s) 739
Alw26I GTCTC 3 cut(s) 1051, 2091, 2393
AlwI GGATC 6 cut(s) 554, 632, 640, 1290, 1514, 1832
Aor13HI TCCGGA 1 cut(s) 2089
AoxI GGCC 6 cut(s) 154, 255, 656, 1597, 1681, 1903
ApeKI GCWGC 5 cut(s) 312, 392, 1764, 2169, 2422
ApoI RAATTY 3 cut(s) 415, 1479, 1998
AseI ATTAAT 1 cut(s) 1559
Asp700I GAANNNNTTC 1 cut(s) 2113
AspS9I GGNCC 3 cut(s) 656, 890, 1613
AvaII GGWCC 2 cut(s) 890, 1613
BaeI ACNNNNGTAYC 2 cut(s) 2176, 2209
BalI TGGCCA 2 cut(s) 156, 257
BanI GGYRCC 2 cut(s) 1173, 1379
BbsI GAAGAC 2 cut(s) 346, 1164
Bbv12I GWGCWC 1 cut(s) 739
BbvI GCAGC 5 cut(s) 324, 379, 1751, 2181, 2434
BccI CCATC 9 cut(s) 82, 571, 613, 818, 1070, 1084, 1531, 1926, 2506
BciT130I CCWGG 3 cut(s) 153, 544, 1196
BciVI GTATCC 2 cut(s) 1816, 2204
BcoDI GTCTC 3 cut(s) 1051, 2091, 2393
BfaI CTAG 8 cut(s) 143, 404, 1298, 1313, 1595, 1899, 2045, 2210
BfmI CTRYAG 2 cut(s) 393, 1239
BfuI GTATCC 2 cut(s) 1816, 2204
BglI GCCNNNNNGGC 1 cut(s) 1605
BglII AGATCT 2 cut(s) 1243, 1951
BisI GCNGC 6 cut(s) 313, 393, 497, 1765, 2170, 2423
BlsI GCNGC 6 cut(s) 314, 394, 498, 1766, 2171, 2424
Bme1390I CCNGG 3 cut(s) 153, 544, 1196
Bme18I GGWCC 2 cut(s) 890, 1613
BmeRI GACNNNNNGTC 1 cut(s) 2406
BmgT120I GGNCC 3 cut(s) 656, 890, 1613
BmiI GGNNCC 2 cut(s) 1175, 1381
BmrFI CCNGG 3 cut(s) 153, 544, 1196
BmrI ACTGGG 1 cut(s) 579
BmsI GCATC 3 cut(s) 1129, 1751, 2303
BmuI ACTGGG 1 cut(s) 579
BpiI GAAGAC 2 cut(s) 346, 1164
BplI GAGNNNNNCTC 2 cut(s) 1253, 1285
BpmI CTGGAG 5 cut(s) 347, 667, 1128, 1255, 1715
Bpu10I CCTNAGC 2 cut(s) 1678, 2418
BpuEI CTTGAG 1 cut(s) 78
BsaHI GRCGYC 1 cut(s) 602
BsaJI CCNNGG 6 cut(s) 151, 659, 846, 1600, 1684, 2100
BsaWI WCCGGW 1 cut(s) 2089
BsaXI ACNNNNNCTCC 2 cut(s) 984, 1014
Bsc4I CCNNNNNNNGG 3 cut(s) 278, 569, 2229
Bse1I ACTGG 4 cut(s) 574, 650, 1616, 1671
Bse3DI GCAATG 1 cut(s) 322
BseAI TCCGGA 1 cut(s) 2089
BseBI CCWGG 3 cut(s) 153, 544, 1196
BseDI CCNNGG 6 cut(s) 151, 659, 846, 1600, 1684, 2100
BseGI GGATG 7 cut(s) 377, 1095, 1151, 1766, 1783, 1984, 2287
BseLI CCNNNNNNNGG 3 cut(s) 278, 569, 2229
BseMI GCAATG 1 cut(s) 322
BseMII CTCAG 3 cut(s) 435, 1692, 2069
BseNI ACTGG 4 cut(s) 574, 650, 1616, 1671
BseRI GAGGAG 2 cut(s) 1005, 1661
BseXI GCAGC 5 cut(s) 324, 379, 1751, 2181, 2434
BseYI CCCAGC 1 cut(s) 1375
BsgI GTGCAG 1 cut(s) 1338
Bsh1236I CGCG 1 cut(s) 2074
BshFI GGCC 6 cut(s) 156, 257, 658, 1599, 1683, 1905
BshNI GGYRCC 2 cut(s) 1173, 1379
BsiHKAI GWGCWC 1 cut(s) 739
BsiSI CCGG 1 cut(s) 2090
BslFI GGGAC 1 cut(s) 147
BslI CCNNNNNNNGG 3 cut(s) 278, 569, 2229
BsmAI GTCTC 3 cut(s) 1051, 2091, 2393
BsmFI GGGAC 1 cut(s) 147
BsmI GAATGC 1 cut(s) 703
BsnI GGCC 6 cut(s) 156, 257, 658, 1599, 1683, 1905
Bsp1286I GDGCHC 1 cut(s) 739
Bsp13I TCCGGA 1 cut(s) 2089
Bsp1407I TGTACA 1 cut(s) 2338
Bsp19I CCATGG 2 cut(s) 659, 2100
BspACI CCGC 5 cut(s) 497, 771, 1275, 1280, 1294
BspANI GGCC 6 cut(s) 156, 257, 658, 1599, 1683, 1905
BspCNI CTCAG 3 cut(s) 436, 1691, 2068
BspEI TCCGGA 1 cut(s) 2089
BspFNI CGCG 1 cut(s) 2074
BspHI TCATGA 2 cut(s) 1117, 1921
BspLI GGNNCC 2 cut(s) 1175, 1381
BspMAI CTGCAG 1 cut(s) 397
BspPI GGATC 6 cut(s) 554, 632, 640, 1290, 1514, 1832
BspQI GCTCTTC 1 cut(s) 1843
BspT107I GGYRCC 2 cut(s) 1173, 1379
BsrBI CCGCTC 1 cut(s) 1280
BsrDI GCAATG 1 cut(s) 322
BsrGI TGTACA 1 cut(s) 2338
BsrI ACTGG 4 cut(s) 574, 650, 1616, 1671
BssECI CCNNGG 6 cut(s) 151, 659, 846, 1600, 1684, 2100
BssNI GRCGYC 1 cut(s) 602
BssT1I CCWWGG 5 cut(s) 659, 846, 1600, 1684, 2100
Bst2UI CCWGG 3 cut(s) 153, 544, 1196
Bst4CI ACNGT 3 cut(s) 591, 1173, 2469
Bst6I CTCTTC 3 cut(s) 793, 1689, 1843
BstACI GRCGYC 1 cut(s) 602
BstAUI TGTACA 1 cut(s) 2338
BstC8I GCNNGC 2 cut(s) 1410, 2020
BstDEI CTNAG 6 cut(s) 275, 444, 710, 1678, 2055, 2418
BstDSI CCRYGG 2 cut(s) 659, 2100
BstENI CCTNNNNNAGG 1 cut(s) 276
BstF5I GGATG 7 cut(s) 377, 1095, 1151, 1766, 1783, 1984, 2287
BstFNI CGCG 1 cut(s) 2074
BstMAI GTCTC 3 cut(s) 1051, 2091, 2393
BstMWI GCNNNNNNNGC 4 cut(s) 1405, 1605, 2422, 2495
BstNI CCWGG 3 cut(s) 153, 544, 1196
BstNSI RCATGY 3 cut(s) 877, 888, 1307
BstSCI CCNGG 3 cut(s) 151, 542, 1194
BstSFI CTRYAG 2 cut(s) 393, 1239
BstUI CGCG 1 cut(s) 2074
BstV1I GCAGC 5 cut(s) 324, 379, 1751, 2181, 2434
BstV2I GAAGAC 2 cut(s) 346, 1164
BstX2I RGATCY 3 cut(s) 1243, 1282, 1951
BstYI RGATCY 3 cut(s) 1243, 1282, 1951
BsuI GTATCC 2 cut(s) 1816, 2204
BsuRI GGCC 6 cut(s) 156, 257, 658, 1599, 1683, 1905
BtgI CCRYGG 2 cut(s) 659, 2100
BtsCI GGATG 7 cut(s) 377, 1095, 1151, 1766, 1783, 1984, 2287
BtsI GCAGTG 3 cut(s) 1662, 1860, 2358
BtsIMutI CAGTG 4 cut(s) 643, 1662, 1860, 2358
Cac8I GCNNGC 2 cut(s) 1410, 2020
CciI TCATGA 2 cut(s) 1117, 1921
Cfr13I GGNCC 3 cut(s) 656, 890, 1613
CseI GACGC 2 cut(s) 335, 610
Csp6I GTAC 5 cut(s) 282, 686, 950, 1106, 2339
CviQI GTAC 5 cut(s) 282, 686, 950, 1106, 2339
DdeI CTNAG 6 cut(s) 275, 444, 710, 1678, 2055, 2418
DriI GACNNNNNGTC 1 cut(s) 2406
EaeI YGGCCR 2 cut(s) 154, 255
Eam1104I CTCTTC 3 cut(s) 793, 1689, 1843
Eam1105I GACNNNNNGTC 1 cut(s) 2406
EarI CTCTTC 3 cut(s) 793, 1689, 1843
EciI GGCGGA 1 cut(s) 1283
Eco130I CCWWGG 5 cut(s) 659, 846, 1600, 1684, 2100
Eco147I AGGCCT 1 cut(s) 1905
Eco47I GGWCC 2 cut(s) 890, 1613
Eco57I CTGAAG 2 cut(s) 163, 2322
EcoNI CCTNNNNNAGG 1 cut(s) 276
EcoRII CCWGG 3 cut(s) 151, 542, 1194
EcoT14I CCWWGG 5 cut(s) 659, 846, 1600, 1684, 2100
EcoT22I ATGCAT 2 cut(s) 1207, 2230
ErhI CCWWGG 5 cut(s) 659, 846, 1600, 1684, 2100
FaqI GGGAC 1 cut(s) 147
FauNDI CATATG 1 cut(s) 775
FblI GTMKAC 1 cut(s) 1238
Fnu4HI GCNGC 6 cut(s) 313, 393, 497, 1765, 2170, 2423
FokI GGATG 7 cut(s) 364, 1102, 1138, 1773, 1790, 1991, 2294
Fsp4HI GCNGC 6 cut(s) 313, 393, 497, 1765, 2170, 2423
FspBI CTAG 8 cut(s) 143, 404, 1298, 1313, 1595, 1899, 2045, 2210
GluI GCNGC 6 cut(s) 313, 393, 497, 1765, 2170, 2423
GsaI CCCAGC 1 cut(s) 1379
GsuI CTGGAG 5 cut(s) 347, 667, 1128, 1255, 1715
HaeIII GGCC 6 cut(s) 156, 257, 658, 1599, 1683, 1905
HapII CCGG 1 cut(s) 2090
HgaI GACGC 2 cut(s) 335, 610
Hin1I GRCGYC 1 cut(s) 602
HindIII AAGCTT 3 cut(s) 806, 909, 1816
HinfI GANTC 9 cut(s) 322, 351, 838, 862, 917, 1474, 1925, 2053, 2285
HpaII CCGG 1 cut(s) 2090
Hpy166II GTNNAC 6 cut(s) 686, 720, 890, 1239, 2339, 2411
Hpy8I GTNNAC 6 cut(s) 686, 720, 890, 1239, 2339, 2411
Hpy99I CGWCG 1 cut(s) 351
HpyAV CCTTC 8 cut(s) 1144, 1634, 1916, 2024, 2053, 2240, 2327, 2510
HpyCH4III ACNGT 3 cut(s) 591, 1173, 2469
HpyCH4IV ACGT 1 cut(s) 1453
HpyF10VI GCNNNNNNNGC 4 cut(s) 1405, 1605, 2422, 2495
HpyF3I CTNAG 6 cut(s) 275, 444, 710, 1678, 2055, 2418
HpySE526I ACGT 1 cut(s) 1453
Hsp92I GRCGYC 1 cut(s) 602
Kpn2I TCCGGA 1 cut(s) 2089
LguI GCTCTTC 1 cut(s) 1843
LmnI GCTCC 7 cut(s) 328, 440, 881, 972, 1147, 1277, 2033
Lsp1109I GCAGC 5 cut(s) 324, 379, 1751, 2181, 2434
LweI GCATC 3 cut(s) 1129, 1751, 2303
MaeI CTAG 8 cut(s) 143, 404, 1298, 1313, 1595, 1899, 2045, 2210
MaeII ACGT 1 cut(s) 1453
MaeIII GTNAC 4 cut(s) 758, 852, 869, 1785
MbiI CCGCTC 1 cut(s) 1280
MboII GAAGA 9 cut(s) 169, 346, 392, 780, 1169, 1706, 1860, 1948, 2188
MflI RGATCY 3 cut(s) 1243, 1282, 1951
MhlI GDGCHC 1 cut(s) 739
MlsI TGGCCA 2 cut(s) 156, 257
MluI ACGCGT 1 cut(s) 2072
MluNI TGGCCA 2 cut(s) 156, 257
MlyI GAGTC 2 cut(s) 360, 2047
MmeI TCCRAC 2 cut(s) 565, 2259
Mox20I TGGCCA 2 cut(s) 156, 257
Mph1103I ATGCAT 2 cut(s) 1207, 2230
MroI TCCGGA 1 cut(s) 2089
MroXI GAANNNNTTC 1 cut(s) 2113
MscI TGGCCA 2 cut(s) 156, 257
MseI TTAA 8 cut(s) 33, 1100, 1337, 1559, 1770, 1878, 1956, 2391
Msp20I TGGCCA 2 cut(s) 156, 257
MspA1I CMGCKG 2 cut(s) 392, 1275
MspI CCGG 1 cut(s) 2090
MspR9I CCNGG 3 cut(s) 153, 544, 1196
Mva1269I GAATGC 1 cut(s) 703
MvaI CCWGG 3 cut(s) 153, 544, 1196
MvnI CGCG 1 cut(s) 2074
MwoI GCNNNNNNNGC 4 cut(s) 1405, 1605, 2422, 2495
NcoI CCATGG 2 cut(s) 659, 2100
NdeI CATATG 1 cut(s) 775
NlaIV GGNNCC 2 cut(s) 1175, 1381
NmuCI GTSAC 1 cut(s) 869
NsiI ATGCAT 2 cut(s) 1207, 2230
NspI RCATGY 3 cut(s) 877, 888, 1307
PagI TCATGA 2 cut(s) 1117, 1921
PceI AGGCCT 1 cut(s) 1905
PciI ACATGT 2 cut(s) 873, 1303
PciSI GCTCTTC 1 cut(s) 1843
PctI GAATGC 1 cut(s) 703
PdmI GAANNNNTTC 1 cut(s) 2113
PfeI GAWTC 7 cut(s) 322, 838, 862, 917, 1474, 1925, 2285
PflMI CCANNNNNTGG 1 cut(s) 569
PkrI GCNGC 6 cut(s) 314, 394, 498, 1766, 2171, 2424
PleI GAGTC 2 cut(s) 359, 2047
PpsI GAGTC 2 cut(s) 359, 2047
PscI ACATGT 2 cut(s) 873, 1303
PshBI ATTAAT 1 cut(s) 1559
PsiI TTATAA 3 cut(s) 102, 335, 555
Psp1406I AACGTT 1 cut(s) 1453
Psp6I CCWGG 3 cut(s) 151, 542, 1194
PspFI CCCAGC 1 cut(s) 1375
PspGI CCWGG 3 cut(s) 151, 542, 1194
PspN4I GGNNCC 2 cut(s) 1175, 1381
PspPI GGNCC 3 cut(s) 656, 890, 1613
PstI CTGCAG 1 cut(s) 397
PsuI RGATCY 3 cut(s) 1243, 1282, 1951
PvuII CAGCTG 1 cut(s) 392
RsaI GTAC 5 cut(s) 283, 687, 951, 1107, 2340
RsaNI GTAC 5 cut(s) 282, 686, 950, 1106, 2339
SapI GCTCTTC 1 cut(s) 1843
SaqAI TTAA 8 cut(s) 33, 1100, 1337, 1559, 1770, 1878, 1956, 2391
SatI GCNGC 6 cut(s) 313, 393, 497, 1765, 2170, 2423
Sau96I GGNCC 3 cut(s) 656, 890, 1613
SchI GAGTC 2 cut(s) 360, 2047
ScrFI CCNGG 3 cut(s) 153, 544, 1196
SduI GDGCHC 1 cut(s) 739
SfaNI GCATC 3 cut(s) 1129, 1751, 2303
SfcI CTRYAG 2 cut(s) 393, 1239
SinI GGWCC 2 cut(s) 890, 1613
SmlI CTYRAG 1 cut(s) 93
SmoI CTYRAG 1 cut(s) 93
SseBI AGGCCT 1 cut(s) 1905
SsiI CCGC 5 cut(s) 497, 771, 1275, 1280, 1294
SspI AATATT 3 cut(s) 1882, 2112, 2479
SspMI CTAG 8 cut(s) 143, 404, 1298, 1313, 1595, 1899, 2045, 2210
StuI AGGCCT 1 cut(s) 1905
StyD4I CCNGG 3 cut(s) 151, 542, 1194
StyI CCWWGG 5 cut(s) 659, 846, 1600, 1684, 2100
TaaI ACNGT 3 cut(s) 591, 1173, 2469
TaiI ACGT 1 cut(s) 1456
TaqI TCGA 3 cut(s) 349, 1137, 2455
TatI WGTACW 1 cut(s) 2338
TauI GCSGC 1 cut(s) 499
TfiI GAWTC 7 cut(s) 322, 838, 862, 917, 1474, 1925, 2285
Tru1I TTAA 8 cut(s) 33, 1100, 1337, 1559, 1770, 1878, 1956, 2391
Tru9I TTAA 8 cut(s) 33, 1100, 1337, 1559, 1770, 1878, 1956, 2391
TscAI CASTG 4 cut(s) 650, 1662, 1860, 2358
TseFI GTSAC 1 cut(s) 869
TseI GCWGC 5 cut(s) 312, 392, 1764, 2169, 2422
Tsp45I GTSAC 1 cut(s) 869
TspGWI ACGGA 1 cut(s) 993
TspRI CASTG 4 cut(s) 650, 1662, 1860, 2358
Van91I CCANNNNNTGG 1 cut(s) 569
VpaK11BI GGWCC 2 cut(s) 890, 1613
VspI ATTAAT 1 cut(s) 1559
XagI CCTNNNNNAGG 1 cut(s) 276
XapI RAATTY 3 cut(s) 415, 1479, 1998
XbaI TCTAGA 2 cut(s) 403, 2044
XceI RCATGY 3 cut(s) 877, 888, 1307
XcmI CCANNNNNNNNNTGG 3 cut(s) 650, 1607, 2509
XmiI GTMKAC 1 cut(s) 1238
XmnI GAANNNNTTC 1 cut(s) 2113
XspI CTAG 8 cut(s) 143, 404, 1298, 1313, 1595, 1899, 2045, 2210
Zsp2I ATGCAT 2 cut(s) 1207, 2230
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.