RchiOBHm_Chr1g0319161

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
6850706 .. 6854354
3649 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54941

Sequence Viewer

Length: 2427 bp
ATGGGTATTGAATCTGAAAGTGTTAGCTTCTTCAATCTCTCAATGTTCTTCTTTTTCATCTTAATCTTGCTTCCACCACAATATCATTGTTCTCAAGTTTATAATATCACTCCTTTGCAACCGTCAGCACAGGGCGACACTCTTGTCTCCCCTAGCAGCATTTTCGAATTAGGCTTCTTCAGTCCTAATGGTTCTGCTAGTAAGTATGTGGGGATATGGCACAAGAATATATCTCCCCGTAAAGTAGTGTGGGTGGCCAACAGGGAAAAGCCCATTGCAGTTACAGGCTCATTGGCGAGTTTGAGAATTAGCAGCAATGGGAGTCTGGAGCTTGTGGATGGGAAACATAACTCTTTATGGTCAACGACCGATGTAACTAGTGAGGTGTCATCATCTAATACTAGTTCAGTTGCAGCACTTCTTTTAGACAGCGGAAATTTTATTGTCAAAGATGATGCATGGGAGGATGGAGCAATGTGGCAGAGCTTTGATTATCCTGGTGACACGCTGCTACCAAACCAGCCGATTCGATACAATACTAAAGCTAAAAAGGGCAATATCTTGACTTCCTGGAAAAGTGAGAGTGATCCATCTACTGGGATATATACAGTTGAAGGCGGACGGGCAACAGAGGTGCCAGCACAAGTGATCATTTGGATTAATCGATCAACTCCTTTCTGGAGAAGTGGGCCATGGGATAAATCAAAGTTCATCGGCTTGCCAGATATGGATGATCGATATCTTAGCGGATTTACAGTAGAAGAGAATGTAGAACAGGGAACACAGGATTTCTCTTATGAATTATTTGACACTTTGGCCACATATGGAGACATCTCTTCACAGGGAAATTTTAAGTTTATGTATGCACAAAATGGTAGGAACTGGTCATTCCACTTCGAAACACTAAAGAATCCATGTGAAATCTATGGAGCATGTGGGCCCTTTGGGGTTTACAACAGCTCTGAATCTCCAATTTGCAAGTGTTTGAAGGGGTTTGTGCCAAGTTCGGACCAGGAATGGAGGAAGGGAAACTGGACCATGGGGTGCGTAAGGCAAACCAACTTGTTCTGTGAAAGACAAACTGATAAGAAGTCATTCTCATTGCAAGGAAAACAGGGTTATAGTGATGATGGGTTTTGGAAGATGACAGGGGCAAAAGTGCCAGATTATCATCAGTATATTACATCTTTGAATACTGATGACATCAATGGCTGCATGATACAGTGCCTAAATAATTGTTCTTGCCTGGCTTATGCACTCGTTAATAATATTGGGTGTTTGGTCTGGTCCAAAGACCTTATAGATATAGTGGGGTTCTCCCAGGGAGGTGTTGATCTTTATATTCGCCTGTCACGCAAACAACTAGGATCGATTCCAACTTCTAGGGATATTATTCAAGAATATATTGGGAAACATGATCCATCAGAGCTATTGATCTATGATTTTGATACCATGTTAACTGCTACAGACAATTTCAGCATTACAAACAAACTCGGGCAAGGAGGCTTTGGTCCTGTTTATAAGGGTATACTACAAGATGGGAAGGAAATAGCTGTAAAAAGACTATCTAGTAGCTCAGGACAAGGCATTGAAGAGTTCAAGAATGAAATGTTGTTGATCTCCAATCTTCAACACAAAAATCTTGTTAGGATGATGGGTTGCTGCATTAAAGAGGACGAGAAGTTACTGGTCTATGAGTTCATGCCAAACAAAAGCTTGGATACGTTTCTATTTGATCCAACGAGGAGAGGAGAGCTTGATTGGGATAGACGCTTTAATATTATTCAGGGTGTTGCTAGAGGGCTTCTTTATCTCCATCATGATTCCTATTTGAAGGTAATACATAGAGATCTGAAAGTCAGCAACATTCTCCTGGATGAAAAAATGAAACCAAAAATTTCAGATTTTGGATTGGCACGCATAGTTGAAGGAACACAATGTATAGAAAATACACAGAAGGTTGTGGGAACACGTGGCTATATGTCTCCAGAGTATGCCCTGGGTGGGATATTTTCTGAAAAATCTGATGACTATAGTTTCAGGGTTTTGGAATTGGAGATTATTAGCGGCAAGAAGAATAACAACTTTTTTTTATATGAGCAACAACTAGGCTTTCTAGCCCATGCATGGAACTTGTGGTATGAAGGCAAGGGATTGGAATTGGTAGATGAAGTATTGGGTGATTCATATTCCTCATCAGAAGTATTGAAATGTGTGCACATTGGGCTTCTTTGTGTACAGGATAATGCTGCGGATAGGCCAACCATGAAGGATATTGCTTTAATGCTAAGTAGCGAGAAAGATGGTACACAACCTAAGAGGCCTGAATTCACTATGCAAAACTCATTTTCTCATCCTCAACCACAGAATGAACATACTAATTCCCCCATAAATGAAGCTACTATTACAGTGATTGAAGGACGATGA

Protein Analysis

808

Amino Acids

90.83

Weight (kDa)

5.34

Isoelectric Point (pI)

40.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 82 - 192 3.6e-28 D-mannose binding lectin
S_locus_glycop PF00954 227 - 335 1.5e-24 S-locus glycoprotein domain
PAN_2 PF08276 375 - 436 2.5e-15 PAN-like domain
Pkinase PF00069 493 - 692 1.2e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 494 - 760 1.4e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 102, 1521
AasI GACNNNNNNGTC 1 cut(s) 143
AccB1I GGYRCC 1 cut(s) 634
AccB7I CCANNNNNTGG 1 cut(s) 596
AccI GTMKAC 1 cut(s) 1528
AciI CCGC 5 cut(s) 432, 618, 747, 2067, 2252
AclWI GGATC 4 cut(s) 581, 1375, 1412, 1730
AcoI YGGCCR 2 cut(s) 255, 816
AcsI RAATTY 4 cut(s) 436, 847, 1896, 2327
AcuI CTGAAG 1 cut(s) 163
AcvI CACGTG 1 cut(s) 1973
AfaI GTAC 2 cut(s) 2238, 2308
AfiI CCNNNNNNNGG 3 cut(s) 596, 2004, 2127
AflIII ACRYGT 1 cut(s) 1970
AhlI ACTAGT 2 cut(s) 377, 401
AjnI CCWGG 7 cut(s) 496, 569, 1011, 1245, 1320, 1872, 1998
Alw21I GWGCWC 1 cut(s) 2220
Alw26I GTCTC 3 cut(s) 151, 822, 1989
Alw44I GTGCAC 1 cut(s) 2216
AlwI GGATC 4 cut(s) 581, 1375, 1412, 1730
Ama87I CYCGRG 1 cut(s) 1493
AoxI GGCC 6 cut(s) 255, 689, 816, 938, 2258, 2321
ApaI GGGCCC 1 cut(s) 942
ApaLI GTGCAC 1 cut(s) 2216
ApeKI GCWGC 7 cut(s) 156, 312, 413, 508, 1212, 1662, 2249
ApoI RAATTY 4 cut(s) 436, 847, 1896, 2327
AseI ATTAAT 1 cut(s) 660
Asp700I GAANNNNTTC 1 cut(s) 1094
AspS9I GGNCC 7 cut(s) 689, 938, 939, 1009, 1035, 1287, 1511
AsuHPI GGTGA 2 cut(s) 512, 2192
AsuII TTCGAA 2 cut(s) 165, 897
AvaI CYCGRG 1 cut(s) 1493
AvaII GGWCC 4 cut(s) 1009, 1035, 1287, 1511
BaeGI GKGCMC 2 cut(s) 942, 2220
BalI TGGCCA 2 cut(s) 257, 818
BanI GGYRCC 1 cut(s) 634
BanII GRGCYC 1 cut(s) 942
BbrPI CACGTG 1 cut(s) 1973
Bbv12I GWGCWC 1 cut(s) 2220
BbvI GCAGC 7 cut(s) 168, 324, 425, 495, 1199, 1649, 2236
BccI CCATC 9 cut(s) 332, 461, 598, 1124, 1429, 1532, 1648, 1824, 2297
BcgI CGANNNNNNTGC 2 cut(s) 145, 179
BciT130I CCWGG 7 cut(s) 498, 571, 1013, 1247, 1322, 1874, 2000
BciVI GTATCC 1 cut(s) 1714
BclI TGATCA 1 cut(s) 648
BcoDI GTCTC 3 cut(s) 151, 822, 1989
BcuI ACTAGT 2 cut(s) 377, 401
BfmI CTRYAG 2 cut(s) 1464, 2032
BfuI GTATCC 1 cut(s) 1714
BglII AGATCT 1 cut(s) 1849
BisI GCNGC 8 cut(s) 157, 313, 414, 509, 1213, 1663, 2068, 2250
BlsI GCNGC 8 cut(s) 158, 314, 415, 510, 1214, 1664, 2069, 2251
Bme1390I CCNGG 7 cut(s) 498, 571, 1013, 1247, 1322, 1874, 2000
Bme18I GGWCC 4 cut(s) 1009, 1035, 1287, 1511
BmeT110I CYCGRG 1 cut(s) 1493
BmgT120I GGNCC 7 cut(s) 689, 938, 939, 1009, 1035, 1287, 1511
BmiI GGNNCC 2 cut(s) 636, 940
BmrFI CCNGG 7 cut(s) 498, 571, 1013, 1247, 1322, 1874, 2000
BmrI ACTGGG 1 cut(s) 606
BmsI GCATC 1 cut(s) 445
BmuI ACTGGG 1 cut(s) 606
BpmI CTGGAG 3 cut(s) 347, 700, 1971
Bpu10I CCTNAGC 1 cut(s) 1576
Bpu14I TTCGAA 2 cut(s) 165, 897
BpuEI CTTGAG 1 cut(s) 78
Bsa29I ATCGAT 3 cut(s) 664, 736, 1370
BsaAI YACGTR 1 cut(s) 1973
BsaBI GATNNNNATC 2 cut(s) 738, 1170
BsaJI CCNNGG 6 cut(s) 692, 1038, 1320, 1321, 1998, 1999
Bsc4I CCNNNNNNNGG 3 cut(s) 596, 2004, 2127
Bse1I ACTGG 4 cut(s) 601, 887, 1037, 1692
Bse3DI GCAATG 4 cut(s) 273, 322, 480, 1100
Bse8I GATNNNNATC 2 cut(s) 738, 1170
BseBI CCWGG 7 cut(s) 498, 571, 1013, 1247, 1322, 1874, 2000
BseCI ATCGAT 3 cut(s) 664, 736, 1370
BseDI CCNNGG 6 cut(s) 692, 1038, 1320, 1321, 1998, 1999
BseGI GGATG 6 cut(s) 343, 472, 736, 1656, 1882, 2353
BseJI GATNNNNATC 2 cut(s) 738, 1170
BseLI CCNNNNNNNGG 3 cut(s) 596, 2004, 2127
BseMI GCAATG 4 cut(s) 273, 322, 480, 1100
BseMII CTCAG 1 cut(s) 1590
BseNI ACTGG 4 cut(s) 601, 887, 1037, 1692
BseRI GAGGAG 2 cut(s) 1759, 1764
BseSI GKGCMC 2 cut(s) 942, 2220
BseXI GCAGC 7 cut(s) 168, 324, 425, 495, 1199, 1649, 2236
Bsh1285I CGRYCG 1 cut(s) 369
BshFI GGCC 6 cut(s) 257, 691, 818, 940, 2260, 2323
BshNI GGYRCC 1 cut(s) 634
BshVI ATCGAT 3 cut(s) 664, 736, 1370
BsiEI CGRYCG 1 cut(s) 369
BsiHKAI GWGCWC 1 cut(s) 2220
BsiHKCI CYCGRG 1 cut(s) 1493
BslI CCNNNNNNNGG 3 cut(s) 596, 2004, 2127
BsmAI GTCTC 3 cut(s) 151, 822, 1989
BsnI GGCC 6 cut(s) 257, 691, 818, 940, 2260, 2323
BsoBI CYCGRG 1 cut(s) 1493
Bsp119I TTCGAA 2 cut(s) 165, 897
Bsp120I GGGCCC 1 cut(s) 938
Bsp1286I GDGCHC 2 cut(s) 942, 2220
Bsp1407I TGTACA 1 cut(s) 2236
Bsp19I CCATGG 2 cut(s) 692, 1038
BspACI CCGC 5 cut(s) 432, 618, 747, 2067, 2252
BspANI GGCC 6 cut(s) 257, 691, 818, 940, 2260, 2323
BspCNI CTCAG 1 cut(s) 1589
BspDI ATCGAT 3 cut(s) 664, 736, 1370
BspHI TCATGA 1 cut(s) 1819
BspLI GGNNCC 2 cut(s) 636, 940
BspPI GGATC 4 cut(s) 581, 1375, 1412, 1730
BspT104I TTCGAA 2 cut(s) 165, 897
BspT107I GGYRCC 1 cut(s) 634
BsrDI GCAATG 4 cut(s) 273, 322, 480, 1100
BsrGI TGTACA 1 cut(s) 2236
BsrI ACTGG 4 cut(s) 601, 887, 1037, 1692
BssECI CCNNGG 6 cut(s) 692, 1038, 1320, 1321, 1998, 1999
BssNAI GTATAC 1 cut(s) 1529
BssT1I CCWWGG 2 cut(s) 692, 1038
Bst1107I GTATAC 1 cut(s) 1529
Bst2UI CCWGG 7 cut(s) 498, 571, 1013, 1247, 1322, 1874, 2000
Bst4CI ACNGT 5 cut(s) 123, 610, 757, 1224, 2410
Bst6I CTCTTC 3 cut(s) 756, 841, 1587
BstAUI TGTACA 1 cut(s) 2236
BstBAI YACGTR 1 cut(s) 1973
BstBI TTCGAA 2 cut(s) 165, 897
BstC8I GCNNGC 3 cut(s) 639, 719, 1918
BstDEI CTNAG 4 cut(s) 743, 1576, 2288, 2316
BstDSI CCRYGG 2 cut(s) 692, 1038
BstF5I GGATG 6 cut(s) 343, 472, 736, 1656, 1882, 2353
BstMAI GTCTC 3 cut(s) 151, 822, 1989
BstMCI CGRYCG 1 cut(s) 369
BstMWI GCNNNNNNNGC 2 cut(s) 1353, 2224
BstNI CCWGG 7 cut(s) 498, 571, 1013, 1247, 1322, 1874, 2000
BstNSI RCATGY 1 cut(s) 936
BstSCI CCNGG 7 cut(s) 496, 569, 1011, 1245, 1320, 1872, 1998
BstSFI CTRYAG 2 cut(s) 1464, 2032
BstSLI GKGCMC 2 cut(s) 942, 2220
BstV1I GCAGC 7 cut(s) 168, 324, 425, 495, 1199, 1649, 2236
BstX2I RGATCY 1 cut(s) 1849
BstYI RGATCY 1 cut(s) 1849
BstZ17I GTATAC 1 cut(s) 1529
Bsu15I ATCGAT 3 cut(s) 664, 736, 1370
BsuI GTATCC 1 cut(s) 1714
BsuRI GGCC 6 cut(s) 257, 691, 818, 940, 2260, 2323
BsuTUI ATCGAT 3 cut(s) 664, 736, 1370
BtgI CCRYGG 2 cut(s) 692, 1038
BtsCI GGATG 6 cut(s) 343, 472, 736, 1656, 1882, 2353
BtsIMutI CAGTG 2 cut(s) 1229, 2415
Cac8I GCNNGC 3 cut(s) 639, 719, 1918
CciI TCATGA 1 cut(s) 1819
Cfr13I GGNCC 7 cut(s) 689, 938, 939, 1009, 1035, 1287, 1511
ClaI ATCGAT 3 cut(s) 664, 736, 1370
CseI GACGC 1 cut(s) 1779
Csp6I GTAC 2 cut(s) 2237, 2307
CviQI GTAC 2 cut(s) 2237, 2307
DdeI CTNAG 4 cut(s) 743, 1576, 2288, 2316
DrdI GACNNNNNNGTC 1 cut(s) 143
DseDI GACNNNNNNGTC 1 cut(s) 143
EaeI YGGCCR 2 cut(s) 255, 816
Eam1104I CTCTTC 3 cut(s) 756, 841, 1587
EarI CTCTTC 3 cut(s) 756, 841, 1587
EciI GGCGGA 1 cut(s) 633
Eco130I CCWWGG 2 cut(s) 692, 1038
Eco147I AGGCCT 1 cut(s) 2323
Eco24I GRGCYC 1 cut(s) 942
Eco32I GATATC 1 cut(s) 740
Eco47I GGWCC 4 cut(s) 1009, 1035, 1287, 1511
Eco57I CTGAAG 1 cut(s) 163
Eco72I CACGTG 1 cut(s) 1973
Eco88I CYCGRG 1 cut(s) 1493
EcoO109I RGGNCCY 1 cut(s) 939
EcoRI GAATTC 1 cut(s) 2327
EcoRII CCWGG 7 cut(s) 496, 569, 1011, 1245, 1320, 1872, 1998
EcoRV GATATC 1 cut(s) 740
EcoT14I CCWWGG 2 cut(s) 692, 1038
EcoT22I ATGCAT 2 cut(s) 460, 2128
EcoT38I GRGCYC 1 cut(s) 942
ErhI CCWWGG 2 cut(s) 692, 1038
FauNDI CATATG 1 cut(s) 823
FbaI TGATCA 1 cut(s) 648
FblI GTMKAC 1 cut(s) 1528
Fnu4HI GCNGC 8 cut(s) 157, 313, 414, 509, 1213, 1663, 2068, 2250
FokI GGATG 6 cut(s) 350, 479, 743, 1663, 1889, 2340
FriOI GRGCYC 1 cut(s) 942
Fsp4HI GCNGC 8 cut(s) 157, 313, 414, 509, 1213, 1663, 2068, 2250
GluI GCNGC 8 cut(s) 157, 313, 414, 509, 1213, 1663, 2068, 2250
GsuI CTGGAG 3 cut(s) 347, 700, 1971
HaeIII GGCC 6 cut(s) 257, 691, 818, 940, 2260, 2323
HgaI GACGC 1 cut(s) 1779
HincII GTYRAC 2 cut(s) 363, 1458
HindII GTYRAC 2 cut(s) 363, 1458
HindIII AAGCTT 1 cut(s) 1714
HinfI GANTC 8 cut(s) 11, 322, 526, 910, 965, 1372, 1823, 2183
HpaI GTTAAC 1 cut(s) 1458
HphI GGTGA 2 cut(s) 512, 2192
Hpy166II GTNNAC 7 cut(s) 363, 952, 1458, 1529, 2218, 2237, 2309
Hpy188I TCNGA 9 cut(s) 16, 964, 1009, 1426, 1854, 1903, 2017, 2026, 2200
Hpy188III TCNNGA 8 cut(s) 326, 562, 679, 1397, 1578, 1600, 1820, 1988
Hpy8I GTNNAC 7 cut(s) 363, 952, 1458, 1529, 2218, 2237, 2309
HpyCH4III ACNGT 5 cut(s) 123, 610, 757, 1224, 2410
HpyCH4IV ACGT 2 cut(s) 1724, 1972
HpyF10VI GCNNNNNNNGC 2 cut(s) 1353, 2224
HpyF3I CTNAG 4 cut(s) 743, 1576, 2288, 2316
HpySE526I ACGT 2 cut(s) 1724, 1972
Ksp22I TGATCA 1 cut(s) 648
KspAI GTTAAC 1 cut(s) 1458
LmnI GCTCC 3 cut(s) 328, 470, 929
Lsp1109I GCAGC 7 cut(s) 168, 324, 425, 495, 1199, 1649, 2236
LweI GCATC 1 cut(s) 445
MaeII ACGT 2 cut(s) 1724, 1972
MaeIII GTNAC 5 cut(s) 280, 373, 500, 1350, 1683
MboII GAAGA 9 cut(s) 22, 40, 169, 773, 828, 1153, 1604, 1619, 2086
MflI RGATCY 1 cut(s) 1849
MhlI GDGCHC 2 cut(s) 942, 2220
MlsI TGGCCA 2 cut(s) 257, 818
MluNI TGGCCA 2 cut(s) 257, 818
MlyI GAGTC 1 cut(s) 331
MmeI TCCRAC 2 cut(s) 1400, 1763
Mox20I TGGCCA 2 cut(s) 257, 818
Mph1103I ATGCAT 2 cut(s) 460, 2128
MroXI GAANNNNTTC 1 cut(s) 1094
MscI TGGCCA 2 cut(s) 257, 818
MseI TTAA 8 cut(s) 62, 660, 852, 1263, 1457, 1668, 1776, 2282
Msp20I TGGCCA 2 cut(s) 257, 818
MspA1I CMGCKG 1 cut(s) 432
MspR9I CCNGG 7 cut(s) 498, 571, 1013, 1247, 1322, 1874, 2000
MvaI CCWGG 7 cut(s) 498, 571, 1013, 1247, 1322, 1874, 2000
MwoI GCNNNNNNNGC 2 cut(s) 1353, 2224
NcoI CCATGG 2 cut(s) 692, 1038
NdeI CATATG 1 cut(s) 823
NlaIV GGNNCC 2 cut(s) 636, 940
NmuCI GTSAC 2 cut(s) 500, 1350
NsiI ATGCAT 2 cut(s) 460, 2128
NspI RCATGY 1 cut(s) 936
NspV TTCGAA 2 cut(s) 165, 897
PagI TCATGA 1 cut(s) 1819
PasI CCCWGGG 2 cut(s) 1321, 1999
PceI AGGCCT 1 cut(s) 2323
PdmI GAANNNNTTC 1 cut(s) 1094
PfeI GAWTC 7 cut(s) 11, 526, 910, 965, 1372, 1823, 2183
PflMI CCANNNNNTGG 1 cut(s) 596
PfoI TCCNGGA 2 cut(s) 569, 1872
PkrI GCNGC 8 cut(s) 158, 314, 415, 510, 1214, 1664, 2069, 2251
PleI GAGTC 1 cut(s) 330
PmaCI CACGTG 1 cut(s) 1973
PmlI CACGTG 1 cut(s) 1973
PpsI GAGTC 1 cut(s) 330
Ppu21I YACGTR 1 cut(s) 1973
PshBI ATTAAT 1 cut(s) 660
PsiI TTATAA 2 cut(s) 102, 1521
Psp6I CCWGG 7 cut(s) 496, 569, 1011, 1245, 1320, 1872, 1998
PspCI CACGTG 1 cut(s) 1973
PspGI CCWGG 7 cut(s) 496, 569, 1011, 1245, 1320, 1872, 1998
PspN4I GGNNCC 2 cut(s) 636, 940
PspOMI GGGCCC 1 cut(s) 938
PspPI GGNCC 7 cut(s) 689, 938, 939, 1009, 1035, 1287, 1511
PsuI RGATCY 1 cut(s) 1849
RsaI GTAC 2 cut(s) 2238, 2308
RsaNI GTAC 2 cut(s) 2237, 2307
SaqAI TTAA 8 cut(s) 62, 660, 852, 1263, 1457, 1668, 1776, 2282
SatI GCNGC 8 cut(s) 157, 313, 414, 509, 1213, 1663, 2068, 2250
Sau96I GGNCC 7 cut(s) 689, 938, 939, 1009, 1035, 1287, 1511
SchI GAGTC 1 cut(s) 331
ScrFI CCNGG 7 cut(s) 498, 571, 1013, 1247, 1322, 1874, 2000
SduI GDGCHC 2 cut(s) 942, 2220
SfaNI GCATC 1 cut(s) 445
SfcI CTRYAG 2 cut(s) 1464, 2032
SfuI TTCGAA 2 cut(s) 165, 897
SinI GGWCC 4 cut(s) 1009, 1035, 1287, 1511
SmlI CTYRAG 1 cut(s) 93
SmoI CTYRAG 1 cut(s) 93
SpeI ACTAGT 2 cut(s) 377, 401
SseBI AGGCCT 1 cut(s) 2323
SsiI CCGC 5 cut(s) 432, 618, 747, 2067, 2252
SspI AATATT 2 cut(s) 1270, 1780
StuI AGGCCT 1 cut(s) 2323
StyD4I CCNGG 7 cut(s) 496, 569, 1011, 1245, 1320, 1872, 1998
StyI CCWWGG 2 cut(s) 692, 1038
TaaI ACNGT 5 cut(s) 123, 610, 757, 1224, 2410
TaiI ACGT 2 cut(s) 1727, 1975
TaqI TCGA 6 cut(s) 165, 529, 664, 736, 897, 1370
TaqII GACCGA 1 cut(s) 383
TatI WGTACW 1 cut(s) 2236
TauI GCSGC 1 cut(s) 2070
TfiI GAWTC 7 cut(s) 11, 526, 910, 965, 1372, 1823, 2183
Tru1I TTAA 8 cut(s) 62, 660, 852, 1263, 1457, 1668, 1776, 2282
Tru9I TTAA 8 cut(s) 62, 660, 852, 1263, 1457, 1668, 1776, 2282
TscAI CASTG 2 cut(s) 1229, 2415
TseFI GTSAC 2 cut(s) 500, 1350
TseI GCWGC 7 cut(s) 156, 312, 413, 508, 1212, 1662, 2249
Tsp45I GTSAC 2 cut(s) 500, 1350
TspRI CASTG 2 cut(s) 1229, 2415
Van91I CCANNNNNTGG 1 cut(s) 596
VneI GTGCAC 1 cut(s) 2216
VpaK11BI GGWCC 4 cut(s) 1009, 1035, 1287, 1511
VspI ATTAAT 1 cut(s) 660
XapI RAATTY 4 cut(s) 436, 847, 1896, 2327
XceI RCATGY 1 cut(s) 936
XmiI GTMKAC 1 cut(s) 1528
XmnI GAANNNNTTC 1 cut(s) 1094
Zsp2I ATGCAT 2 cut(s) 460, 2128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.